View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12803_high_13 (Length: 333)
Name: NF12803_high_13
Description: NF12803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12803_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 3 - 331
Target Start/End: Original strand, 29736382 - 29736710
Alignment:
| Q |
3 |
tgtatagggtattcatcttcatcatccatttgaatatcgaaatctggaacatggtaattcattttgcttcgcttctgtttagttgaattgaactgaaaag |
102 |
Q |
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| T |
29736382 |
tgtatagggtattcatcttcatcatccatttgaatatcgaaatctggaacatggtaattcattttgcttcgcttctgtttagttgaattgaactgaaaag |
29736481 |
T |
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| Q |
103 |
gaaacaaataacaagcaattaaaattaaagtatcaagtagaaatagtaattaaattctaaaaaatgaacaacttactattgaagctagttagctgatcca |
202 |
Q |
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| T |
29736482 |
gaaacaaataacaagcaattaaaattaaagtatcaagtagaaatagtaattaaattctaaaaaatgaacaacttactattgaagctagttagctgatcca |
29736581 |
T |
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| Q |
203 |
gaacatagtgagcaaattaaaactaagattaatttgtgtggagcttaaatttttgttgcttgatttgaatgaattgagtctatatcttaatcttaatctt |
302 |
Q |
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| T |
29736582 |
gaacatagtgagcaaattaaaactaagattaatttgtgtggagcttaaatttttgttgcttgatttgaatgaattgagtctatatcttaatcttaatctt |
29736681 |
T |
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| Q |
303 |
atgctatgtatattatattattggagatg |
331 |
Q |
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| T |
29736682 |
atgctatgtatattatatgattggagatg |
29736710 |
T |
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