View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12803_high_14 (Length: 326)
Name: NF12803_high_14
Description: NF12803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12803_high_14 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 54 - 326
Target Start/End: Original strand, 7220167 - 7220442
Alignment:
| Q |
54 |
aataatagatttatgaagaagagaaaaaacctttgaaaccaaaagaaggatttgagtcagggattccaataagaagtggtagacacagagcaatacctaa |
153 |
Q |
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| T |
7220167 |
aataatagacttatgaagaagagaaaaaacctttgaaaccaaaagaaagatttgagttagggattccaataagaagtggtagacacagagcaatacctaa |
7220266 |
T |
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| Q |
154 |
accagaatactactatgggtaagtactcatct----ttaaattgttgattactagattaagcaatcttctgaa---atgagttttgaattaattgattga |
246 |
Q |
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| T |
7220267 |
accagaatactactatgggtaagtactcatctttaattaaattgttaattagtagattaagcaatcttctgaactgatgagttttgaattaattgattga |
7220366 |
T |
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| Q |
247 |
atcaacaaacagatcagcaagatcattggctggtaatgttactccaccatctcgtacttacatgagagttgctaagagtg |
326 |
Q |
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| T |
7220367 |
gtc----aacagatcagcaagatcattggctggtaatgttactccaccatctcgtacttacatgagagttgctaagagtg |
7220442 |
T |
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