View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12803_high_19 (Length: 306)
Name: NF12803_high_19
Description: NF12803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12803_high_19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 11 - 306
Target Start/End: Complemental strand, 47427073 - 47426775
Alignment:
| Q |
11 |
aagaatatgagcatggaagaaatgttggaggttatgagaagtagaagtggtccactagatgttaaaagcagaaagtatgactcaatggcatattattcaa |
110 |
Q |
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| T |
47427073 |
aagaatatgagcatggaagaaatgttggaggttatgagaagtagaagtggtccactagatgttaaaagcagaaagtatgactcaatggcatattattcaa |
47426974 |
T |
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| Q |
111 |
gaagtcgatcaatatcaaaacgagaaaatcaattgaagaagaag---aatcacatgaataataatcctagaacaattctcacagcaccaaacagcccaga |
207 |
Q |
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| T |
47426973 |
gaagtcgatcaatttcaaaacgagaaaatcaattgaaaaagaaggagaatcacatgaataataatcctagaacaattctcacagcaccaaacagcccaga |
47426874 |
T |
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| Q |
208 |
aaagtactacagtgacatgattgaatatatggacccaacaaccttatcaacatctcagcgtcacattattgtgcctcctagaaaatcatggtcatcacc |
306 |
Q |
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| T |
47426873 |
aaagtactacagtgacatgattgaatatatggacccaacaaccttatcaacatctcagcgtcacattattgtgcctcctagaaaatcatggtcatcacc |
47426775 |
T |
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