View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1280_high_22 (Length: 309)

Name: NF1280_high_22
Description: NF1280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1280_high_22
NF1280_high_22
[»] chr6 (6 HSPs)
chr6 (54-165)||(11308215-11308328)
chr6 (239-309)||(11308445-11308515)
chr6 (107-162)||(11314008-11314063)
chr6 (164-194)||(11308370-11308400)
chr6 (110-156)||(11589355-11589401)
chr6 (107-152)||(607830-607875)
[»] chr5 (3 HSPs)
chr5 (100-156)||(19986878-19986934)
chr5 (113-156)||(2807991-2808034)
chr5 (110-154)||(3959690-3959734)
[»] chr3 (7 HSPs)
chr3 (97-156)||(43020020-43020079)
chr3 (112-156)||(43021651-43021695)
chr3 (97-156)||(37521841-37521900)
chr3 (101-156)||(8237726-8237781)
chr3 (107-162)||(8993660-8993715)
chr3 (97-156)||(24515987-24516046)
chr3 (109-156)||(36656897-36656944)
[»] chr1 (8 HSPs)
chr1 (97-156)||(10765748-10765807)
chr1 (97-162)||(5493263-5493328)
chr1 (96-156)||(3346028-3346088)
chr1 (97-156)||(5494131-5494191)
chr1 (112-171)||(12214989-12215049)
chr1 (112-156)||(38832845-38832889)
chr1 (112-155)||(14230477-14230520)
chr1 (97-162)||(5489564-5489629)
[»] chr4 (5 HSPs)
chr4 (107-156)||(2215691-2215740)
chr4 (112-156)||(30925380-30925424)
chr4 (97-156)||(35603202-35603262)
chr4 (112-162)||(30926008-30926058)
chr4 (97-156)||(24549965-24550025)
[»] chr7 (1 HSPs)
chr7 (112-156)||(43071726-43071770)
[»] chr2 (4 HSPs)
chr2 (100-156)||(38564615-38564671)
chr2 (97-148)||(27530233-27530284)
chr2 (102-157)||(44021780-44021835)
chr2 (112-148)||(34061324-34061360)
[»] chr8 (3 HSPs)
chr8 (97-156)||(4047529-4047588)
chr8 (97-162)||(41829481-41829547)
chr8 (112-156)||(24409222-24409266)
[»] scaffold0443 (1 HSPs)
scaffold0443 (97-143)||(6564-6610)
[»] scaffold0486 (1 HSPs)
scaffold0486 (107-156)||(1519-1568)


Alignment Details
Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 11308215 - 11308328
Alignment:
Q  54 cagagtatgaaactacttgattttgttcgaaaagagagattaaatat--atataaggggttgctaacttactctcacttaaaaatatgaaggagtaagtt 151  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  11308215 cagaatatgaaattacttgattttgttcgaaaagagagattaaatatatatataaggggttgctaacttactcccacttaaaaacacgaaggagtaagtt 11308314  T
Q  152 agcaaatctacccc 165  Q
    ||||||||||||||    
T  11308315 agcaaatctacccc 11308328  T

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Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 239 - 309
Target Start/End: Original strand, 11308445 - 11308515
Alignment:
Q  239 aatgttgttgctgcttcccacgacaccgtttcccgttcttatgttttcgttttctcgttgttttgtggaat 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11308445 aatgttgttgctgcttcccacgacaccgtttcccgttcttatgttttcgttttctcgttgttttgtggaat 11308515  T

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Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 11314063 - 11314008
Alignment:
Q  107 ggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctac 162  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||| |||||    
T  11314063 ggggttgctaacttactctcacctaaaaatatgaaagagtaagttagcaagtctac 11314008  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 194
Target Start/End: Original strand, 11308370 - 11308400
Alignment:
Q  164 ccactagtttaatgaatgaacataattgtaa 194  Q
    |||||||||||||||||||||||||||||||    
T  11308370 ccactagtttaatgaatgaacataattgtaa 11308400  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 11589401 - 11589355
Alignment:
Q  110 gttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    |||| |||||||||| ||| |||||| ||||||||||||||||||||    
T  11589401 gttgttaacttactcccacctaaaaacatgaaggagtaagttagcaa 11589355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 607830 - 607875
Alignment:
Q  107 ggggttgctaacttactctcacttaaaaatatgaaggagtaagtta 152  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||||    
T  607830 ggggttgctaacttactctcacctaaaaacgtgaaagagtaagtta 607875  T

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Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 19986934 - 19986878
Alignment:
Q  100 tatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    |||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||    
T  19986934 tatatagggggttgctaacttactcccacctaaaaacatgaaggagtaagttagcaa 19986878  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 2807991 - 2808034
Alignment:
Q  113 gctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    |||||||||||||||| |||||| | ||||||||||||||||||    
T  2807991 gctaacttactctcacctaaaaacacgaaggagtaagttagcaa 2808034  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 3959734 - 3959690
Alignment:
Q  110 gttgctaacttactctcacttaaaaatatgaaggagtaagttagc 154  Q
    ||||||||||||||| |||  ||||| ||||||||||||||||||    
T  3959734 gttgctaacttactcccaccaaaaaacatgaaggagtaagttagc 3959690  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 43020020 - 43020079
Alignment:
Q  97 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||| |||| ||||||||||||| ||| |||||| ||||||||||||||||||||    
T  43020020 atatatatatggggctgctaacttactcccacctaaaaacatgaaggagtaagttagcaa 43020079  T

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Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 43021695 - 43021651
Alignment:
Q  112 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  43021695 tgctaacttactcccacttaaaaacatgaaggagtaagttagcaa 43021651  T

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Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 37521841 - 37521900
Alignment:
Q  97 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||| |||| ||||||||||||| |||  ||||| ||||||||||||||||||||    
T  37521841 atatatatatggggctgctaacttactcccacccaaaaacatgaaggagtaagttagcaa 37521900  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 8237726 - 8237781
Alignment:
Q  101 atataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||| |||| || |||||||||| ||| ||||||||||||||| |||||||||||    
T  8237726 atatagggggctgttaacttactcccacctaaaaatatgaaggaataagttagcaa 8237781  T

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Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 8993660 - 8993715
Alignment:
Q  107 ggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctac 162  Q
    |||||||||||||||||||||   ||||  |||||||||||||||||||| |||||    
T  8993660 ggggttgctaacttactctcatccaaaatcatgaaggagtaagttagcaagtctac 8993715  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 24515987 - 24516046
Alignment:
Q  97 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||| |||||||||||||||||| |||  |||||||||||| ||  |||||||||    
T  24515987 atatatatatggggttgctaacttactcacacccaaaaatatgaagaagcgagttagcaa 24516046  T

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Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 36656944 - 36656897
Alignment:
Q  109 ggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||| |||||||||||||| |||||| |||||| |||||||||||||    
T  36656944 ggttgttaacttactctcacctaaaaacatgaagaagtaagttagcaa 36656897  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 10765748 - 10765807
Alignment:
Q  97 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||| |||| ||||||||||||| ||| |||||| ||||||||||||||||||||    
T  10765748 atatatatatggggctgctaacttactcccacctaaaaacatgaaggagtaagttagcaa 10765807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 5493263 - 5493328
Alignment:
Q  97 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctac 162  Q
    ||||||||| |||| |||||||||||||  ||  |||||||||||| ||||||||||||| |||||    
T  5493263 atatatatatggggctgctaacttactccaacccaaaaatatgaagcagtaagttagcaagtctac 5493328  T

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Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 3346028 - 3346088
Alignment:
Q  96 aatatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||||  ||| |||||||||| || ||| |||||| ||||||||||||||||||||    
T  3346028 aatatatatagagggctgctaacttagtcccacctaaaaacatgaaggagtaagttagcaa 3346088  T

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Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 5494191 - 5494131
Alignment:
Q  97 atatatata-aggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||| |||||||||||||||| || |||  ||||| ||||||||||||||||||||    
T  5494191 atatatatataggggttgctaacttattcccacccaaaaacatgaaggagtaagttagcaa 5494131  T

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Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 12214989 - 12215049
Alignment:
Q  112 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctac-cccactagt 171  Q
    ||||||||||||| |||| ||||| |||| ||||||||||||||| ||||| |||||||||    
T  12214989 tgctaacttactcccactcaaaaacatgatggagtaagttagcaactctactcccactagt 12215049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 38832845 - 38832889
Alignment:
Q  112 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||    
T  38832845 tgctaacttactcccacctaaaaacatgaaggagtaagttagcaa 38832889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 155
Target Start/End: Complemental strand, 14230520 - 14230477
Alignment:
Q  112 tgctaacttactctcacttaaaaatatgaaggagtaagttagca 155  Q
    ||||||||||||  || |||||||||||||||||||||||||||    
T  14230520 tgctaacttactaccaattaaaaatatgaaggagtaagttagca 14230477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 5489564 - 5489629
Alignment:
Q  97 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctac 162  Q
    ||||||||| |||| ||||||| |||||  |   |||||||||||||||||||||||||| |||||    
T  5489564 atatatatagggggctgctaacctactccaatccaaaaatatgaaggagtaagttagcaagtctac 5489629  T

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Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 2215740 - 2215691
Alignment:
Q  107 ggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    |||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  2215740 ggggttgctaacttactctcacctaaaaatacgaaggagtaagctagcaa 2215691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 30925380 - 30925424
Alignment:
Q  112 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||||    
T  30925380 tgctaacttactcccacctaaaaatattaaggagtaagttagcaa 30925424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 35603262 - 35603202
Alignment:
Q  97 atatatataaggggtt-gctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||| |||||| |||||||||||| |||  ||||| ||||||||||||||||||||    
T  35603262 atatatatatggggtttgctaacttactcccacccaaaaacatgaaggagtaagttagcaa 35603202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 30926058 - 30926008
Alignment:
Q  112 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaaatctac 162  Q
    ||||||||||||| ||  |||||| |||||||||||||||||||| |||||    
T  30926058 tgctaacttactcccatctaaaaacatgaaggagtaagttagcaagtctac 30926008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 24550025 - 24549965
Alignment:
Q  97 atatatata-aggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||| ||||| |||||||||| || |||| ||||| ||||| ||||||||||||||    
T  24550025 atatatatataggggctgctaacttagtcccactcaaaaacatgaatgagtaagttagcaa 24549965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 43071770 - 43071726
Alignment:
Q  112 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||    
T  43071770 tgctaacttactctcacccaaaaacatgaaggagtaagttagcaa 43071726  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 38564671 - 38564615
Alignment:
Q  100 tatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    |||||| |||| ||||||||||||  ||| |||||| ||||||||||||||||||||    
T  38564671 tatatagggggatgctaacttacttccacctaaaaacatgaaggagtaagttagcaa 38564615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 27530284 - 27530233
Alignment:
Q  97 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaa 148  Q
    ||||||||| |||||||||||||||||| |||  ||||| ||||||||||||    
T  27530284 atatatatatggggttgctaacttactcccacccaaaaacatgaaggagtaa 27530233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 44021835 - 44021780
Alignment:
Q  102 tataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaaa 157  Q
    |||| |||| ||| ||||||| | ||| ||||||||||||||||||||||||||||    
T  44021835 tatagggggctgccaacttacacccacctaaaaatatgaaggagtaagttagcaaa 44021780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 34061324 - 34061360
Alignment:
Q  112 tgctaacttactctcacttaaaaatatgaaggagtaa 148  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  34061324 tgctaacttactcacactgaaaaatatgaaggagtaa 34061360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 4047529 - 4047588
Alignment:
Q  97 atatatataaggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||| |||| || |||||||| ||||||||||||||| |||| | ||||||||||    
T  4047529 atatatatatggggctgttaacttacactcacttaaaaatattaaggtgcaagttagcaa 4047588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 41829547 - 41829481
Alignment:
Q  97 atatatataaggggttgctaacttactctcactt-aaaaatatgaaggagtaagttagcaaatctac 162  Q
    ||||||||| || | |||||||||||||||||   ||||| |||||||||||||||||||| |||||    
T  41829547 atatatatagggagctgctaacttactctcaccccaaaaacatgaaggagtaagttagcaagtctac 41829481  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 24409222 - 24409266
Alignment:
Q  112 tgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||||||||||| |||  ||||| ||||||||||||||||||||    
T  24409222 tgctaacttactcccacccaaaaacatgaaggagtaagttagcaa 24409266  T

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Target: scaffold0443 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 6610 - 6564
Alignment:
Q  97 atatatataaggggttgctaacttactctcacttaaaaatatgaagg 143  Q
    ||||||||| ||||||||||||||||||||||  ||||| |||||||    
T  6610 atatatatagggggttgctaacttactctcacaaaaaaacatgaagg 6564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 1568 - 1519
Alignment:
Q  107 ggggttgctaacttactctcacttaaaaatatgaaggagtaagttagcaa 156  Q
    ||||| |||||||||||| |||  ||||| ||||||||||||||||||||    
T  1568 ggggtggctaacttactcgcacccaaaaagatgaaggagtaagttagcaa 1519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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