View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1280_low_13 (Length: 355)

Name: NF1280_low_13
Description: NF1280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1280_low_13
NF1280_low_13
[»] chr4 (43 HSPs)
chr4 (97-210)||(53369551-53369664)
chr4 (102-210)||(19852846-19852954)
chr4 (102-210)||(48977444-48977552)
chr4 (102-205)||(12789721-12789824)
chr4 (202-284)||(45674895-45674976)
chr4 (202-284)||(50606068-50606149)
chr4 (202-283)||(12789552-12789632)
chr4 (202-283)||(21441641-21441721)
chr4 (202-283)||(53369932-53370012)
chr4 (102-210)||(49820852-49820958)
chr4 (114-210)||(53369752-53369848)
chr4 (202-270)||(44791256-44791323)
chr4 (202-283)||(19853038-19853118)
chr4 (202-283)||(48977636-48977716)
chr4 (153-210)||(45674754-45674811)
chr4 (49-103)||(12789846-12789900)
chr4 (49-103)||(19850521-19850575)
chr4 (49-103)||(45674636-45674690)
chr4 (49-103)||(53369480-53369534)
chr4 (153-210)||(44791407-44791464)
chr4 (153-210)||(50605927-50605984)
chr4 (51-103)||(49820778-49820830)
chr4 (49-103)||(44791528-44791582)
chr4 (231-284)||(48731172-48731225)
chr4 (165-210)||(21441512-21441557)
chr4 (231-283)||(9469865-9469917)
chr4 (202-277)||(12673034-12673108)
chr4 (202-285)||(28265671-28265753)
chr4 (202-277)||(51995138-51995212)
chr4 (231-289)||(36543869-36543927)
chr4 (254-286)||(43387368-43387400)
chr4 (102-134)||(49378093-49378125)
chr4 (244-283)||(26633037-26633076)
chr4 (254-284)||(38791802-38791832)
chr4 (229-283)||(46944544-46944598)
chr4 (243-284)||(4274555-4274596)
chr4 (243-284)||(9959431-9959472)
chr4 (202-283)||(11055226-11055306)
chr4 (254-283)||(22184614-22184643)
chr4 (202-283)||(50146918-50146998)
chr4 (243-283)||(80597-80637)
chr4 (243-283)||(48802475-48802515)
chr4 (202-286)||(51407946-51408029)
[»] scaffold0316 (3 HSPs)
scaffold0316 (102-210)||(19164-19272)
scaffold0316 (202-283)||(19356-19436)
scaffold0316 (49-103)||(19088-19142)
[»] chr2 (26 HSPs)
chr2 (102-210)||(41959011-41959119)
chr2 (202-283)||(33831555-33831635)
chr2 (102-210)||(36538524-36538632)
chr2 (202-283)||(27634731-27634811)
chr2 (202-283)||(36538716-36538796)
chr2 (202-283)||(33163980-33164060)
chr2 (202-283)||(41959203-41959283)
chr2 (153-210)||(33831346-33831403)
chr2 (202-281)||(26436414-26436491)
chr2 (153-210)||(34064624-34064681)
chr2 (202-271)||(34064765-34064833)
chr2 (49-103)||(34064506-34064560)
chr2 (49-102)||(26436167-26436220)
chr2 (49-103)||(36538448-36538502)
chr2 (49-103)||(41958935-41958989)
chr2 (165-210)||(26436285-26436330)
chr2 (49-99)||(27633532-27633582)
chr2 (202-283)||(3409188-3409268)
chr2 (229-282)||(30713242-30713295)
chr2 (102-134)||(27633608-27633640)
chr2 (244-283)||(11028009-11028048)
chr2 (244-286)||(20203711-20203753)
chr2 (229-283)||(40680295-40680349)
chr2 (154-183)||(27634585-27634614)
chr2 (244-285)||(27902437-27902478)
chr2 (243-283)||(27464572-27464612)
[»] chr1 (38 HSPs)
chr1 (102-210)||(24469981-24470089)
chr1 (102-210)||(47603026-47603134)
chr1 (102-210)||(36418969-36419077)
chr1 (102-210)||(37441350-37441458)
chr1 (202-284)||(7702895-7702976)
chr1 (202-284)||(24469816-24469897)
chr1 (204-283)||(32179920-32179998)
chr1 (202-285)||(47602860-47602942)
chr1 (202-283)||(36419161-36419241)
chr1 (99-210)||(35309477-35309586)
chr1 (202-283)||(37441186-37441266)
chr1 (49-103)||(37441480-37441534)
chr1 (49-103)||(47603156-47603210)
chr1 (153-210)||(32179777-32179834)
chr1 (51-103)||(35309406-35309458)
chr1 (202-285)||(35810778-35810860)
chr1 (52-103)||(36418896-36418947)
chr1 (202-283)||(25124885-25124965)
chr1 (202-283)||(28006410-28006490)
chr1 (243-286)||(29677516-29677559)
chr1 (202-285)||(45581006-45581088)
chr1 (202-284)||(12224574-12224655)
chr1 (229-283)||(15014401-15014455)
chr1 (202-283)||(24575969-24576049)
chr1 (244-285)||(42937175-42937216)
chr1 (254-286)||(44596628-44596660)
chr1 (236-283)||(6413332-6413379)
chr1 (244-283)||(14578585-14578624)
chr1 (236-283)||(38061178-38061225)
chr1 (202-284)||(15306553-15306634)
chr1 (229-283)||(23916896-23916950)
chr1 (243-285)||(39802765-39802807)
chr1 (229-283)||(47983341-47983395)
chr1 (202-283)||(7841683-7841762)
chr1 (202-283)||(21680656-21680736)
chr1 (243-283)||(7956424-7956464)
chr1 (229-277)||(40159636-40159684)
chr1 (229-285)||(42916112-42916168)
[»] chr8 (10 HSPs)
chr8 (202-283)||(453543-453623)
chr8 (202-277)||(11161632-11161706)
chr8 (153-210)||(453402-453459)
chr8 (153-210)||(11161491-11161548)
chr8 (246-283)||(9412524-9412561)
chr8 (229-285)||(39478136-39478192)
chr8 (60-103)||(453293-453336)
chr8 (202-275)||(43384854-43384926)
chr8 (244-284)||(3308035-3308075)
chr8 (244-283)||(33279977-33280016)
[»] chr7 (52 HSPs)
chr7 (202-287)||(5794932-5795016)
chr7 (102-208)||(15434116-15434222)
chr7 (202-282)||(36927064-36927143)
chr7 (102-210)||(388859-388967)
chr7 (102-206)||(3930884-3930988)
chr7 (102-210)||(37334151-37334259)
chr7 (102-206)||(48505956-48506060)
chr7 (202-283)||(28949758-28949838)
chr7 (202-283)||(5776130-5776210)
chr7 (202-283)||(43052937-43053017)
chr7 (202-285)||(665845-665927)
chr7 (202-279)||(3930720-3930796)
chr7 (49-210)||(28949922-28950071)
chr7 (102-207)||(36926871-36926977)
chr7 (102-210)||(26216146-26216253)
chr7 (202-283)||(37334343-37334423)
chr7 (202-277)||(389011-389085)
chr7 (153-210)||(5795100-5795157)
chr7 (202-285)||(42072148-42072230)
chr7 (202-274)||(45176310-45176381)
chr7 (153-208)||(43052796-43052851)
chr7 (49-103)||(3931010-3931064)
chr7 (49-103)||(15434040-15434094)
chr7 (49-103)||(42071889-42071943)
chr7 (49-103)||(43052678-43052732)
chr7 (49-103)||(48506082-48506136)
chr7 (153-210)||(42072007-42072064)
chr7 (52-103)||(388787-388838)
chr7 (155-210)||(5776294-5776349)
chr7 (49-103)||(5795221-5795275)
chr7 (245-286)||(15434312-15434353)
chr7 (202-283)||(48505795-48505868)
chr7 (284-326)||(31981979-31982021)
chr7 (232-284)||(20401090-20401142)
chr7 (244-284)||(26216371-26216411)
chr7 (231-285)||(3942269-3942323)
chr7 (49-103)||(36926796-36926849)
chr7 (236-285)||(18740216-18740265)
chr7 (246-283)||(22075171-22075208)
chr7 (202-283)||(46573612-46573692)
chr7 (231-283)||(7447969-7448021)
chr7 (202-282)||(18249994-18250073)
chr7 (243-283)||(33171534-33171574)
chr7 (231-283)||(33898944-33898996)
chr7 (254-284)||(33124811-33124841)
chr7 (49-99)||(45174986-45175036)
chr7 (153-183)||(45176132-45176162)
chr7 (254-283)||(222226-222255)
chr7 (202-283)||(33935573-33935653)
chr7 (99-132)||(45175059-45175092)
chr7 (102-134)||(7444262-7444294)
chr7 (202-282)||(41449805-41449884)
[»] chr5 (23 HSPs)
chr5 (202-283)||(27906158-27906238)
chr5 (102-210)||(22921918-22922026)
chr5 (202-279)||(18880252-18880328)
chr5 (102-207)||(27905965-27906071)
chr5 (202-283)||(29328103-29328183)
chr5 (102-206)||(18880062-18880164)
chr5 (202-284)||(15933223-15933304)
chr5 (49-103)||(18879986-18880040)
chr5 (49-103)||(22921842-22921896)
chr5 (49-103)||(27905889-27905943)
chr5 (49-103)||(29327825-29327879)
chr5 (231-284)||(3801363-3801416)
chr5 (102-183)||(29327901-29327983)
chr5 (229-289)||(38522855-38522915)
chr5 (231-284)||(31620956-31621009)
chr5 (229-283)||(27450581-27450635)
chr5 (236-283)||(19716271-19716318)
chr5 (229-284)||(27196163-27196218)
chr5 (234-285)||(32156944-32156995)
chr5 (229-283)||(31021949-31022003)
chr5 (229-283)||(39409212-39409266)
chr5 (244-285)||(20189074-20189115)
chr5 (243-283)||(32945021-32945061)
[»] chr6 (11 HSPs)
chr6 (102-210)||(8200510-8200618)
chr6 (102-209)||(10346589-10346696)
chr6 (202-283)||(10346781-10346861)
chr6 (202-283)||(8200691-8200771)
chr6 (49-103)||(10346513-10346567)
chr6 (49-103)||(8200434-8200488)
chr6 (229-284)||(5640251-5640306)
chr6 (246-283)||(10961796-10961833)
chr6 (229-285)||(3081716-3081772)
chr6 (243-283)||(13312124-13312164)
chr6 (243-283)||(4441301-4441341)
[»] chr3 (26 HSPs)
chr3 (202-283)||(32689229-32689309)
chr3 (102-210)||(41609755-41609864)
chr3 (102-210)||(23206471-23206580)
chr3 (202-281)||(23206310-23206388)
chr3 (202-277)||(41609948-41610021)
chr3 (202-285)||(19560772-19560854)
chr3 (49-103)||(41609679-41609733)
chr3 (51-103)||(32688972-32689024)
chr3 (49-103)||(23206602-23206656)
chr3 (202-283)||(12710762-12710842)
chr3 (153-209)||(32689088-32689144)
chr3 (202-286)||(9505118-9505201)
chr3 (202-282)||(26049541-26049620)
chr3 (231-283)||(54393443-54393495)
chr3 (246-284)||(25253805-25253843)
chr3 (229-283)||(54432177-54432231)
chr3 (231-283)||(39135442-39135494)
chr3 (244-283)||(30743673-30743712)
chr3 (229-288)||(39469526-39469585)
chr3 (202-277)||(39942806-39942880)
chr3 (243-286)||(44574626-44574669)
chr3 (246-284)||(33438730-33438768)
chr3 (234-283)||(46293213-46293262)
chr3 (251-284)||(53529616-53529649)
chr3 (243-283)||(40943661-40943701)
chr3 (231-279)||(45714784-45714832)
[»] scaffold0022 (1 HSPs)
scaffold0022 (231-277)||(124487-124533)
[»] scaffold0171 (1 HSPs)
scaffold0171 (202-283)||(21147-21227)
[»] scaffold0224 (1 HSPs)
scaffold0224 (229-285)||(7306-7362)


Alignment Details
Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 97 - 210
Target Start/End: Original strand, 53369551 - 53369664
Alignment:
Q  97 cttttaagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaag 196  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| ||    
T  53369551 ctttcaagacaaaattgtattcaaccacatttgccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcgataatcgag 53369650  T
Q  197 ccatctcatgaacc 210  Q
    ||||||||||||||    
T  53369651 ccatctcatgaacc 53369664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 19852846 - 19852954
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||| ||||||||||| ||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19852846 aagagaaaattgtattaagccacatttgccacatttgaattaaaaaattttaaaaactaactcaaattgatttatatatataatcgataatcgagccatc 19852945  T
Q  202 tcatgaacc 210  Q
    |||||||||    
T  19852946 tcatgaacc 19852954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 48977444 - 48977552
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    ||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  48977444 aagacaaaattgtattcggccacatttgccacatttgaattaaaaaaaattaaaaactaactcaaattgatttatatatataatcgataatcgagctatc 48977543  T
Q  202 tcatgaacc 210  Q
    |||||||||    
T  48977544 tcatgaacc 48977552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 205
Target Start/End: Complemental strand, 12789824 - 12789721
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    ||||||||||||||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  12789824 aagacaaaattgtattcagccacatttgccacatttgaaataatttttttaaaaaactaactcaaattgatttatatatataatcaataatcgagccatc 12789725  T
Q  202 tcat 205  Q
    ||||    
T  12789724 tcat 12789721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 45674895 - 45674976
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45674895 tcatgaaccaagttcgacgg-attagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 45674976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 50606068 - 50606149
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50606068 tcatgaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgaattggttcggttcattgccagccctac 50606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 12789632 - 12789552
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12789632 tcataaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 12789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 21441641 - 21441721
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  21441641 tcatgaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcaacccta 21441721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 53369932 - 53370012
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53369932 tcatgaaccaagttcaacgg-attaaatatcgagttgaatgtcgaactataatcgagttggttcggttcattgccagcccta 53370012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 49820852 - 49820958
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||  |||||||||||||| |||||||    
T  49820852 aagacaaaattgtattcagccacatttgtcacatttgaattaaatttttttaaaaactaactcaaattgatttata--tataatcgataatcgagccatc 49820949  T
Q  202 tcatgaacc 210  Q
    |||||||||    
T  49820950 tcatgaacc 49820958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 53369752 - 53369848
Alignment:
Q  114 tattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    |||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  53369752 tattcaaccacatttgccacatttgaattaaaattttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacc 53369848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 44791323 - 44791256
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttc 270  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44791323 tcatgaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttggttcggttc 44791256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 19853038 - 19853118
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  19853038 tcatgaaccaagttcaacgg-attaaatatcgagtcgaatgtcaaactataatcgagttggttcgattcattgacagcccta 19853118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 48977636 - 48977716
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||| ||||||||||  |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  48977636 tcatgaacgaagttcaacga-attaaatatcgagtcgaatgtcgaattataatcgagttggttcggttcattgccagcccta 48977716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 45674754 - 45674811
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45674754 aaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacc 45674811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 12789900 - 12789846
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  12789900 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 12789846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 19850521 - 19850575
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  19850521 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 19850575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 45674636 - 45674690
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  45674636 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 45674690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 53369480 - 53369534
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  53369480 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 53369534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 44791464 - 44791407
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    |||||||||||||||||||||||||||||||||| |||||| || |||||||||||||    
T  44791464 aaaaactaactcaaattgatttatatatataatcaataatcgagtcatctcatgaacc 44791407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 50605927 - 50605984
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  50605927 aaaaactaactcaaattgatttatatatataatcaataatcgagccatctcataaacc 50605984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 49820778 - 49820830
Alignment:
Q  51 caacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  49820778 caacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 49820830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 44791582 - 44791528
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  44791582 tccaacaaaatttaattagttgtgaacaaaattcataatattcttttacttttaa 44791528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 48731225 - 48731172
Alignment:
Q  231 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  48731225 tcgagtcgaatttcgaactatattcgagttggttcggttcattggcagccctac 48731172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 21441512 - 21441557
Alignment:
Q  165 aaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||    
T  21441512 aaattgatttatatatataatcaataatcgagccatctcatgaacc 21441557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 9469865 - 9469917
Alignment:
Q  231 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||  ||||||||| ||||||||||||||||||||| ||||||||    
T  9469865 tcgagtcgaattacgaactatattcgagttggttcggttcattgtcagcccta 9469917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 12673108 - 12673034
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 277  Q
    ||||||||||||||||||| | | |  |||||| |||||| |||||||||  ||||||||||||||||||||||||    
T  12673108 tcatgaaccaagttcaacgag-tcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgcca 12673034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 28265753 - 28265671
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||||||||||||||||  ||||  || ||| |||| | |||||||||  |||||||||||| |||||||||||||||||||    
T  28265753 tcatgaaccaagttcaacga-attaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgccagccctact 28265671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 51995138 - 51995212
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 277  Q
    |||||||||||||||||||  ||||  |||||| |||| | |||||||||  ||||||||||||||||||||||||    
T  51995138 tcatgaaccaagttcaacga-attaattatcgaatcgagtctcgaactattttcgagttggttcggttcattgcca 51995212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 289
Target Start/End: Original strand, 36543869 - 36543927
Alignment:
Q  231 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctacttata 289  Q
    |||||||||||  ||||||||| |||||||||||| |||||||| |||||||| |||||    
T  36543869 tcgagtcgaattacgaactatattcgagttggttcagttcattgtcagccctatttata 36543927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 286
Target Start/End: Original strand, 43387368 - 43387400
Alignment:
Q  254 tcgagttggttcggttcattgccagccctactt 286  Q
    |||||||||||||||||||||||||||||||||    
T  43387368 tcgagttggttcggttcattgccagccctactt 43387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 134
Target Start/End: Complemental strand, 49378125 - 49378093
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccaca 134  Q
    |||||||||||||||||||||||||||||||||    
T  49378125 aagacaaaattgtattcagccacatttgccaca 49378093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 283
Target Start/End: Original strand, 26633037 - 26633076
Alignment:
Q  244 cgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  26633037 cgaactattatcgagttggttcggttcattgccggcccta 26633076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 284
Target Start/End: Original strand, 38791802 - 38791832
Alignment:
Q  254 tcgagttggttcggttcattgccagccctac 284  Q
    |||||||||||||||||||||||||||||||    
T  38791802 tcgagttggttcggttcattgccagccctac 38791832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 46944598 - 46944544
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| |||||| |||||||||  | ||||||||||||||||||| ||||||||    
T  46944598 tatcgaatcgaatctcgaactatttttgagttggttcggttcattgtcagcccta 46944544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 4274596 - 4274555
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    |||||||||  |||||||||||||||||||||| ||||||||    
T  4274596 tcgaactattttcgagttggttcggttcattgctagccctac 4274555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 9959431 - 9959472
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    |||||||||  ||||||||||||||||||||| |||||||||    
T  9959431 tcgaactattgtcgagttggttcggttcattgtcagccctac 9959472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 11055306 - 11055226
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||||||||| | | |||  |||||| |||| |  ||||||||  ||||||||||||||||||||| ||||||||    
T  11055306 tcatgaaccaagttcaatgag-ttaattatcgaatcgagttccgaactattgtcgagttggttcggttcattgtcagcccta 11055226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 283
Target Start/End: Original strand, 22184614 - 22184643
Alignment:
Q  254 tcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||||||||||||||||||||||    
T  22184614 tcgagttggttcggttcattgccagcccta 22184643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 50146998 - 50146918
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||  || |  | |||| ||||||  |||||| ||||||| ||||||||||||||||| |||||||    
T  50146998 tcatgaaccaagttcaacga-atcaattgtcgaatcgaattacgaactttaatcgaattggttcggttcattgctagcccta 50146918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 80597 - 80637
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||  ||||||||| ||||||||||||||||||||    
T  80597 tcgaactattttcgagttggatcggttcattgccagcccta 80637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 48802515 - 48802475
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||  ||||||||||||||||||||| ||||||||    
T  48802515 tcgaactattttcgagttggttcggttcattgtcagcccta 48802475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 51408029 - 51407946
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctactt 286  Q
    |||||||||||||| ||||  ||||  || ||| |||| | |||||||||  |||||||||||| |||||||| |||||||||||    
T  51408029 tcatgaaccaagttgaacga-attaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgtcagccctactt 51407946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 76; Significance: 4e-35; HSPs: 3)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 19164 - 19272
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  19164 aagacaaaattgtattcagccacatttgccacatttgaattaaaaaattttaaaaactaactcaaattgatttatatatataatcaataatcgagccatc 19263  T
Q  202 tcatgaacc 210  Q
    |||||||||    
T  19264 tcatgaacc 19272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 19356 - 19436
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19356 tcatgaaccaagttcaaagg-attagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 19436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 19088 - 19142
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  19088 tccaacaaaatttaattagttgtgaacaaaattcataatattcttttacttttaa 19142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 41959011 - 41959119
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41959011 aagacaaaattgtattcagccacatttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatc 41959110  T
Q  202 tcatgaacc 210  Q
    |||| ||||    
T  41959111 tcattaacc 41959119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 33831555 - 33831635
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33831555 tcatgaaccaaattcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 33831635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 36538524 - 36538632
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||||| |||||| || ||||    
T  36538524 aagacaaaattgtattcagccacatttgtcacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagtcatc 36538623  T
Q  202 tcatgaacc 210  Q
    |||||||||    
T  36538624 tcatgaacc 36538632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 27634731 - 27634811
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27634731 tcatgaactaagttcaacgg-attaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 27634811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 36538716 - 36538796
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  36538716 tcatgaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttggtttggttcattgtcagcccta 36538796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 33164060 - 33163980
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||    
T  33164060 tcatgaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgaattggttcggttcattaccggcccta 33163980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 41959203 - 41959283
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  41959203 tcatgaatcaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttgattcggttcattgtcagcccta 41959283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 33831346 - 33831403
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33831346 aaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacc 33831403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 26436414 - 26436491
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccc 281  Q
    |||||||||||||||||||| |||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  26436414 tcatgaaccaagttcaacgg-attaaatatcgagtcgaatgtc-aattataatcgagttggttcggttcattgccggccc 26436491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 34064624 - 34064681
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  34064624 aaaaactaactcaaattgatttatatatataatcgataatcgaaccatctcatgaacc 34064681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 34064765 - 34064833
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttca 271  Q
    |||||||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  34064765 tcatgaactaagttcaacgg-attagatattgagtcgaatgtcgaactataattgagttggttcggttca 34064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 34064506 - 34064560
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  34064506 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 34064560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 26436167 - 26436220
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttactttta 102  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  26436167 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttactttta 26436220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 36538448 - 36538502
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  36538448 tccaacaaaattcaattaattgtgaacaaaattcataatattcttttacttttaa 36538502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 41958935 - 41958989
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  41958935 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttaattttaa 41958989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 26436285 - 26436330
Alignment:
Q  165 aaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  26436285 aaattgatttatatatataatcgataatcgagccatctcatgaacc 26436330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 27633532 - 27633582
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttactt 99  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||||||||    
T  27633532 tccaacaaaattcaattagctgtgaacaaaattcataatattattttactt 27633582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 3409268 - 3409188
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||||||||||| | |||  | |||| |||| | |||||||||  ||||||||||||||||||||||||||||||    
T  3409268 tcatgaaccaagttcaacgag-ttaattgtcgaatcgagtttcgaactattgtcgagttggttcggttcattgccagcccta 3409188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 30713242 - 30713295
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccct 282  Q
    |||||| ||||||  |||||  ||||||||||||||||||||||||||||||||    
T  30713242 tatcgaatcgaattacgaacactaatcgagttggttcggttcattgccagccct 30713295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 134
Target Start/End: Original strand, 27633608 - 27633640
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccaca 134  Q
    |||||||||||||||||||||||||||||||||    
T  27633608 aagacaaaattgtattcagccacatttgccaca 27633640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 283
Target Start/End: Original strand, 11028009 - 11028048
Alignment:
Q  244 cgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  11028009 cgaactctaattgagttggttcggttcattgccagcccta 11028048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 286
Target Start/End: Complemental strand, 20203753 - 20203711
Alignment:
Q  244 cgaactataatcgagttggttcggttcattgccagccctactt 286  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||    
T  20203753 cgaactttaatcgagttggttcggttaattgctagccctactt 20203711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 40680295 - 40680349
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| ||||||  |||||||| || ||||||||||||||||||||||| ||||    
T  40680295 tatcgaatcgaattccgaactattattgagttggttcggttcattgccagtccta 40680349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 27634585 - 27634614
Alignment:
Q  154 aaaactaactcaaattgatttatatatata 183  Q
    ||||||||||||||||||||||||||||||    
T  27634585 aaaactaactcaaattgatttatatatata 27634614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 27902478 - 27902437
Alignment:
Q  244 cgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||| ||||||||||||||||||||| || ||||||||||    
T  27902478 cgaactttaatcgagttggttcggttcaatgtcagccctact 27902437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 27464612 - 27464572
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||  ||||||||||||||||||||| ||||||||    
T  27464612 tcgaactattttcgagttggttcggttcattgtcagcccta 27464572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 24470089 - 24469981
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24470089 aagacaaaattgtattcagcgacatttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatc 24469990  T
Q  202 tcatgaacc 210  Q
    |||||||||    
T  24469989 tcatgaacc 24469981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 47603134 - 47603026
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47603134 aagacaaaattgtattcaaccacatttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatc 47603035  T
Q  202 tcatgaacc 210  Q
    |||||||||    
T  47603034 tcatgaacc 47603026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 36418969 - 36419077
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||| || ||||    
T  36418969 aagacaaaattgtattcagccacatttgccacatttgaattaaaaaaatttaaaaactaattcaaattgatttatatatataatcgataatcgagtcatc 36419068  T
Q  202 tcatgaacc 210  Q
    |||||||||    
T  36419069 tcatgaacc 36419077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 37441458 - 37441350
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| || ||||    
T  37441458 aagacaaaattgtattcagccacatttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagacatc 37441359  T
Q  202 tcatgaacc 210  Q
    |||| ||||    
T  37441358 tcattaacc 37441350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 7702895 - 7702976
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7702895 tcatgaaccaagttcaacgg-attaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 7702976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 24469897 - 24469816
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24469897 tcatgaaccaagttcaacgg-attaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 24469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 204 - 283
Target Start/End: Original strand, 32179920 - 32179998
Alignment:
Q  204 atgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32179920 atgaaccaagttcaacgg-attaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 32179998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 47602942 - 47602860
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  47602942 tcatgaaccaagttcaacgg-attaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagccctact 47602860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 36419161 - 36419241
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36419161 tcatgaaccaagttcgacgg-attaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 36419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 210
Target Start/End: Original strand, 35309477 - 35309586
Alignment:
Q  99 tttaagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagcc 198  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||  |||||||||||||||| | ||||    
T  35309477 tttaagacaaaattgaattcagccacatttgccacatttgaattaaaaaattttaaaaactaactcaaattgatt--tatatataatcgataagcgagcc 35309574  T
Q  199 atctcatgaacc 210  Q
    ||||||||||||    
T  35309575 atctcatgaacc 35309586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 37441266 - 37441186
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  37441266 tcatgaaccaagttcaacgg-attagatatcgagttgaatgtcgaactataatctagttgattcggttcattgccagcccta 37441186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 37441534 - 37441480
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  37441534 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 37441480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 47603210 - 47603156
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  47603210 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 47603156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 32179777 - 32179834
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  32179777 aaaaactaactcaaattgatttatatatataatcgataattgagtcatctcatgaacc 32179834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 35309406 - 35309458
Alignment:
Q  51 caacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  35309406 caacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 35309458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 35810778 - 35810860
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||||||||||||||||  || |  | |||| ||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  35810778 tcatgaaccaagttcaacga-atcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgccagccctact 35810860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 36418896 - 36418947
Alignment:
Q  52 aacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    ||||||| |||||||| |||||||||||||||||||||| ||||||||||||    
T  36418896 aacaaaattcaattagctgtgaacaaaattcataatattattttacttttaa 36418947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 25124965 - 25124885
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||  || |  |||| | ||||||  |||||| |||||||||||||||||||||||||||||||||    
T  25124965 tcatgaaccaagttcaacga-atcaattatcaaatcgaattacgaactttaatcgagttggttcggttcattgccagcccta 25124885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 28006410 - 28006490
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||||||||||| | | |  |||||| |||||| |||||||||  ||||||||||||||||||||||| ||||||    
T  28006410 tcatgaaccaagttcaacgag-tcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgccggcccta 28006490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 29677559 - 29677516
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagccctactt 286  Q
    |||||||||  |||||||||||||||||||||||||||||||||    
T  29677559 tcgaactattttcgagttggttcggttcattgccagccctactt 29677516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 45581088 - 45581006
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    ||||||||||||||||||| ||| |  |||||| |||| | |||||||||  || |||||||||||||||||| ||||||||||    
T  45581088 tcatgaaccaagttcaacgagataat-tatcgaatcgagtttcgaactattttcaagttggttcggttcattgtcagccctact 45581006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 12224655 - 12224574
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    ||||||||||||||||||| | |||  | |||| ||||||  ||||||||  ||||||||||||||||||||| |||||||||    
T  12224655 tcatgaaccaagttcaacgag-ttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcattgtcagccctac 12224574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 15014401 - 15014455
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| ||||||  |||||| ||||||||||||||||||||||||||| |||||    
T  15014401 tatcgaatcgaattacgaactctaatcgagttggttcggttcattgccaacccta 15014455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 24575969 - 24576049
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||||||||||| | | |  |||||| || ||| |||||||||  ||||||||||||||||||||| ||||||||    
T  24575969 tcatgaaccaagttcaacgag-tcaattatcgaatcaaatctcgaactattttcgagttggttcggttcattgtcagcccta 24576049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 42937175 - 42937216
Alignment:
Q  244 cgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  42937175 cgaactctaatcgagttggttcagttcattgccagccctact 42937216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 286
Target Start/End: Original strand, 44596628 - 44596660
Alignment:
Q  254 tcgagttggttcggttcattgccagccctactt 286  Q
    |||||||||||||||||||||||||||||||||    
T  44596628 tcgagttggttcggttcattgccagccctactt 44596660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 6413332 - 6413379
Alignment:
Q  236 tcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| |||||||||  ||||||||||||| ||||||||||||||||    
T  6413332 tcgaatctcgaactattttcgagttggttcgattcattgccagcccta 6413379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 283
Target Start/End: Complemental strand, 14578624 - 14578585
Alignment:
Q  244 cgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  14578624 cgaactctaatcgagttggttcggttcattgtcagcccta 14578585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 38061225 - 38061178
Alignment:
Q  236 tcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| ||| |||||  ||||||||||||||||||||||||||||||    
T  38061225 tcgaatctcgcactattttcgagttggttcggttcattgccagcccta 38061178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 15306553 - 15306634
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    ||||||||||||||||| |  ||||  |||||| |||| |  ||||||||  || ||||||||||||||||||||||||||||    
T  15306553 tcatgaaccaagttcaatga-attaattatcgaatcgagttccgaactattgtcaagttggttcggttcattgccagccctac 15306634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 23916896 - 23916950
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| ||||||  |||||| |||||||||||||| ||||||||| ||||||||    
T  23916896 tatcgaatcgaattacgaactttaatcgagttggtttggttcattgtcagcccta 23916950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 39802807 - 39802765
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||||||  ||||||||||||| ||||||||||||||||||    
T  39802807 tcgaactattttcgagttggttcgattcattgccagccctact 39802765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 47983341 - 47983395
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| |||||| |||||||||  ||||||||||||||||||||| || |||||    
T  47983341 tatcgaatcgaatctcgaactattttcgagttggttcggttcattgtcaacccta 47983395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 7841683 - 7841762
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||  ||||  |||||| |||| | ||||| |||  ||||||||||||||||||||| ||||||||    
T  7841683 tcatgaaccaagttcaacga-attaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattgacagcccta 7841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 21680736 - 21680656
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||| |||||||||||||| ||| |  |||||| |||| | |||||||||  ||||| |||||||||||||||||| |||||    
T  21680736 tcataaaccaagttcaacgagataat-tatcgaatcgagtttcgaactattttcgagctggttcggttcattgccaacccta 21680656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 7956424 - 7956464
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||  |||||||||||||||||||||||| |||||    
T  7956424 tcgaactattttcgagttggttcggttcattgccaacccta 7956464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 40159684 - 40159636
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 277  Q
    |||||| |||||| || ||||||  ||||||||||||||||||||||||    
T  40159684 tatcgaatcgaatatcaaactattttcgagttggttcggttcattgcca 40159636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 42916168 - 42916112
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||| ||||||  |||||  ||||||| ||||||||||||||||||| |||||||    
T  42916168 tatcgaatcgaattacgaacactaatcgaattggttcggttcattgccacccctact 42916112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 7e-34; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 453543 - 453623
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  453543 tcatgaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 453623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 11161632 - 11161706
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 277  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  11161632 tcatgaaccaagttcaacgg-attaaatatcgagtcgaatgtcgaactataatcaagttggtttggttcattgcca 11161706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 453402 - 453459
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  453402 aaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacc 453459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 11161491 - 11161548
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  11161491 aaaaactaactcaaattgatttatatatataatccataatcgagccatctcatgaacc 11161548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 9412561 - 9412524
Alignment:
Q  246 aactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9412561 aactataatcgagttggttcggttcattgccagcccta 9412524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 39478136 - 39478192
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||| |||| | |||||||||  ||||||||||||||||||||||||||||||||    
T  39478136 tatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagccctact 39478192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 453293 - 453336
Alignment:
Q  60 tcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||| | |||||||||||||||||||||||||||||||||    
T  453293 tcaattagttatgaacaaaattcataatattcttttacttttaa 453336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 43384854 - 43384926
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgc 275  Q
    ||||||||||| |||||||  ||||  |||||| |||||| |||||||||  ||||||||||||||||||||||    
T  43384854 tcatgaaccaacttcaacga-attaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgc 43384926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 3308035 - 3308075
Alignment:
Q  244 cgaactataatcgagttggttcggttcattgccagccctac 284  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  3308035 cgaactattgtcgagttggttcggttcattgccagccctac 3308075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 283
Target Start/End: Complemental strand, 33280016 - 33279977
Alignment:
Q  244 cgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  33280016 cgaactttaatcgagttggttcggttcattgtcagcccta 33279977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 7e-34; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 202 - 287
Target Start/End: Complemental strand, 5795016 - 5794932
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctactta 287  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5795016 tcatgaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgggttggttcggttcattgccagccctactta 5794932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 15434116 - 15434222
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  15434116 aagacaaaattgtattcagccacatttgccacatttgaattaataaaatttaaaaactaactaaaattgatttatatatataatcgataatcgagccatc 15434215  T
Q  202 tcatgaa 208  Q
    |||||||    
T  15434216 tcatgaa 15434222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 36927064 - 36927143
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccct 282  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36927064 tcatgaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccct 36927143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 388859 - 388967
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    ||||||||||||||||||||  |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  388859 aagacaaaattgtattcagcgccatttgccacatttgaattaaatttttttaaaaactaactcaaattgatttatatatataatcgataatcgagccatc 388958  T
Q  202 tcatgaacc 210  Q
    |||||||||    
T  388959 tcatgaacc 388967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 206
Target Start/End: Complemental strand, 3930988 - 3930884
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  3930988 aagacaaaattgtattcagccacatttgccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagccatc 3930889  T
Q  202 tcatg 206  Q
    |||||    
T  3930888 tcatg 3930884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 37334151 - 37334259
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  37334151 aagacaaaattgtattcagcgacatttgccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcgacaatcgagccatc 37334250  T
Q  202 tcatgaacc 210  Q
    |||||||||    
T  37334251 tcatgaacc 37334259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 206
Target Start/End: Complemental strand, 48506060 - 48505956
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  48506060 aagacaaaattgtattcagccacatttgccacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagccatc 48505961  T
Q  202 tcatg 206  Q
    |||||    
T  48505960 tcatg 48505956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 28949838 - 28949758
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28949838 tcatgaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttgattcggttcattgccagcccta 28949758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 5776210 - 5776130
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5776210 tcatgaaccaagttcaacgg-attaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccaacccta 5776130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 43052937 - 43053017
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43052937 tcatgaaccaagttcaacgg-attaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccaacccta 43053017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 665927 - 665845
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    ||||||||||| || ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  665927 tcatgaaccaaatttaacgg-attaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 665845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 3930796 - 3930720
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagc 279  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3930796 tcatggaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttgtttcggttcattgccagc 3930720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 49 - 210
Target Start/End: Complemental strand, 28950071 - 28949922
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaagacaaaattgtattcagccacatttgccacatttgaattaa-nnn 147  Q
    |||||||||| |||||||| | ||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||        
T  28950071 tccaacaaaattcaattagctatgaacaaaattcataatattcttttactttta-------------ttcagccacatttgccacatttgaattaatttt 28949985  T
Q  148 nnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
        ||||||||| |||||||||||||||||||||||||||||||| || ||| |||||||||    
T  28949984 tttaaaaaaactacctcaaattgatttatatatataatcgataatcgagtcatttcatgaacc 28949922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 207
Target Start/End: Original strand, 36926871 - 36926977
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnn-aaaaaactaactcaaattgatttatatatataatcgataatcaagccat 200  Q
    |||||||||||||||||| ||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  36926871 aagacaaaattgtattcaaccacatttgtcacatttgaattaattttttttaaaaaactaactcaaattgatttatatatataatcaataatcaagcaat 36926970  T
Q  201 ctcatga 207  Q
    |||||||    
T  36926971 ctcatga 36926977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 26216146 - 26216253
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnna-aaaaactaactcaaattgatttatatatataatcgataatcaagccat 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||||||||  |||||||||||||| ||||||    
T  26216146 aagacaaaattgtattcagcgacatttgccacatttgaattaatttttttttaaaaactaactcaaattgatttata--tataatcgataatcgagccat 26216243  T
Q  201 ctcatgaacc 210  Q
    ||||||||||    
T  26216244 ctcatgaacc 26216253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 37334343 - 37334423
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||    
T  37334343 tcatgaaccaagttcaacgg-attaaatatcgaatcgaatgtcgaactataatcgagttggttcggttcattgtcaacccta 37334423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 389011 - 389085
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 277  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  389011 tcatgaaccaagttcaacgg-attaaatatcgagttgaatgtcgaactataatcgagttgattcggttcattgcca 389085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 5795157 - 5795100
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5795157 aaaaactaactcaaattgatttatatatataatcgataatcgagccatctcatgaacc 5795100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 42072148 - 42072230
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    ||||||| |||||||||||| |||||||||||| ||||||||| |||||||||||||||| |||||| ||||| ||||||||||    
T  42072148 tcatgaatcaagttcaacgg-attagatatcgaatcgaatgtcaaactataatcgagttgtttcggtacattgtcagccctact 42072230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 202 - 274
Target Start/End: Original strand, 45176310 - 45176381
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 274  Q
    |||||||||||||||||||| ||||  |||||||||||||||| ||||||||||||||| |||||||||||||    
T  45176310 tcatgaaccaagttcaacgg-attaattatcgagtcgaatgtcaaactataatcgagtttgttcggttcattg 45176381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 43052796 - 43052851
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaa 208  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  43052796 aaaaactaactcaaattgatttatatatataatcgataatcgagtcatctcatgaa 43052851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 3931064 - 3931010
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  3931064 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 3931010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 15434040 - 15434094
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  15434040 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 15434094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 42071889 - 42071943
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  42071889 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 42071943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 43052678 - 43052732
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  43052678 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 43052732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 48506136 - 48506082
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  48506136 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 48506082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 42072007 - 42072064
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    |||||||||||||||||||||||||||||||||| |||||| || |||||||||||||    
T  42072007 aaaaactaactcaaattgatttatatatataatcaataatcgagtcatctcatgaacc 42072064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 388787 - 388838
Alignment:
Q  52 aacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  388787 aacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 388838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 5776349 - 5776294
Alignment:
Q  155 aaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaacc 210  Q
    |||||||||||||||||||| |||||||||||||||||| || |||||||||||||    
T  5776349 aaactaactcaaattgatttttatatataatcgataatcgagtcatctcatgaacc 5776294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 5795275 - 5795221
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  5795275 tccaacaaaattcaattagttgtgaataaaattcataatattcttttacttttaa 5795221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 286
Target Start/End: Original strand, 15434312 - 15434353
Alignment:
Q  245 gaactataatcgagttggttcggttcattgccagccctactt 286  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15434312 gaactataatcgagttggttcggttcattgccagccctactt 15434353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 48505868 - 48505795
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| ||||||||| ||||||||       ||||||||||||||||||||||||||| ||||||||    
T  48505868 tcatgaaccaagttcaacgg-attagatattgagtcgaa-------ctataatcgagttggttcggttcattgtcagcccta 48505795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 326
Target Start/End: Complemental strand, 31982021 - 31981979
Alignment:
Q  284 cttataagggactaaatatatgaataaatttttgtagggaaat 326  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  31982021 cttataaaggactaaatatatgaataaatttttgtagggaaat 31981979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 20401090 - 20401142
Alignment:
Q  232 cgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || ||||||    
T  20401090 cgagtcgaatttcgaactatattcgagttggttcggttcattgtcaaccctac 20401142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 26216371 - 26216411
Alignment:
Q  244 cgaactataatcgagttggttcggttcattgccagccctac 284  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  26216371 cgaactataatcaagttggttcggttcattgccagccctac 26216411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 3942269 - 3942323
Alignment:
Q  231 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||| ||||||  |||||| |||||||||||||||||||||||| ||||||||||    
T  3942269 tcgaatcgaattacgaactttaatcgagttggttcggttcattgtcagccctact 3942323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 36926796 - 36926849
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| || ||||| |||||||||||||||||||| ||||||||||||||    
T  36926796 tccaacaaaattctattagctgtgaacaaaattcataata-tcttttacttttaa 36926849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 18740265 - 18740216
Alignment:
Q  236 tcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||| |||||||||  ||||||||||||||||||||||| ||||||||    
T  18740265 tcgaatctcgaactattttcgagttggttcggttcattgccggccctact 18740216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 22075171 - 22075208
Alignment:
Q  246 aactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| |||||||||||||||||||||||||||||||    
T  22075171 aactattatcgagttggttcggttcattgccagcccta 22075208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 46573692 - 46573612
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||||||||||| | | |  |||||| |||||| ||||| |||  | ||||||||||||||||||||||||||||    
T  46573692 tcatgaaccaagttcaacgag-tcaattatcgaatcgaatctcgaattatttttgagttggttcggttcattgccagcccta 46573612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 7447969 - 7448021
Alignment:
Q  231 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||   |||||||| ||||||||||||||||||||| ||||||||    
T  7447969 tcgagtcgaattatgaactatattcgagttggttcggttcattgtcagcccta 7448021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 18250073 - 18249994
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccct 282  Q
    |||||||||||||||||||  || |  |||||| |||| | | |||||||  |||||||||||||||||||||||||||||    
T  18250073 tcatgaaccaagttcaacga-atcaattatcgaatcgagtcttgaactattttcgagttggttcggttcattgccagccct 18249994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 33171574 - 33171534
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  33171574 tcgaactattatcgagttggttcggatcattgccagcccta 33171534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 33898996 - 33898944
Alignment:
Q  231 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||| |||||| |||||||||  ||||||||||||||||||||| ||||||||    
T  33898996 tcgaatcgaatatcgaactattttcgagttggttcggttcattgtcagcccta 33898944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 284
Target Start/End: Original strand, 33124811 - 33124841
Alignment:
Q  254 tcgagttggttcggttcattgccagccctac 284  Q
    |||||||||||||||||||||||||||||||    
T  33124811 tcgagttggttcggttcattgccagccctac 33124841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 45174986 - 45175036
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttactt 99  Q
    |||||||||| |||| ||| || |||||||||||||||||||||| |||||    
T  45174986 tccaacaaaattcaagtagctgagaacaaaattcataatattcttctactt 45175036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 183
Target Start/End: Original strand, 45176132 - 45176162
Alignment:
Q  153 aaaaactaactcaaattgatttatatatata 183  Q
    |||||||||||||||||||||||||||||||    
T  45176132 aaaaactaactcaaattgatttatatatata 45176162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 283
Target Start/End: Complemental strand, 222255 - 222226
Alignment:
Q  254 tcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||||||||||||||||||||||    
T  222255 tcgagttggttcggttcattgccagcccta 222226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 33935573 - 33935653
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||||||||||| | |||  |||||| |||| |  | ||||||  ||||||||||||| ||||||||||||||||    
T  33935573 tcatgaaccaagttcaacgag-ttaattatcgaatcgagtcccaaactattgtcgagttggttcgattcattgccagcccta 33935653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 45175059 - 45175092
Alignment:
Q  99 tttaagacaaaattgtattcagccacatttgcca 132  Q
    |||||||||||||||||||||||||||| |||||    
T  45175059 tttaagacaaaattgtattcagccacatctgcca 45175092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 134
Target Start/End: Original strand, 7444262 - 7444294
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccaca 134  Q
    ||||||||||||||||||||||| |||||||||    
T  7444262 aagacaaaattgtattcagccacttttgccaca 7444294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 41449805 - 41449884
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccct 282  Q
    ||||||||||||||||||| ||| |  | |||| |||| | |||||||||  |||||||||||||| |||||| |||||||    
T  41449805 tcatgaaccaagttcaacgagataat-tgtcgaatcgagtttcgaactattgtcgagttggttcggatcattgtcagccct 41449884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 7e-34; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 27906158 - 27906238
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27906158 tcatgaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 27906238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 22921918 - 22922026
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||| ||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||||| |||||| |||||||    
T  22921918 aagacaaaatcgtattcagccacatttgtcacatttgaattaattttttttaaaaactaactcaaattgatttatatatataatcaataatcgagccatc 22922017  T
Q  202 tcatgaacc 210  Q
    |||||||||    
T  22922018 tcatgaacc 22922026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 18880252 - 18880328
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagc 279  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18880252 tcatgaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagc 18880328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 207
Target Start/End: Original strand, 27905965 - 27906071
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnna-aaaaactaactcaaattgatttatatatataatcgataatcaagccat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  27905965 aagacaaaattgtattcagccacatttgccacatttgaattattttttttttaaaaactaactcaaattgatttatatatataatcaataatcgagccat 27906064  T
Q  201 ctcatga 207  Q
    |||||||    
T  27906065 ctcatga 27906071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 29328103 - 29328183
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  29328103 tcatgaatcaagttcaacgg-attaaatatcgagtcgaatgtcgaactataatcgagtttgttcggttcattgtcagcccta 29328183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 18880062 - 18880164
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||| ||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||| |||||| |||||||    
T  18880062 aagacaaaattgtattcaaccacatttgccacatttgaattaaatttttt-aaaaact-actcaaattgatttatatatataatcaataatcgagccatc 18880159  T
Q  202 tcatg 206  Q
    |||||    
T  18880160 tcatg 18880164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 15933223 - 15933304
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    |||||||||||||||||||  ||||  | ||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  15933223 tcatgaaccaagttcaacga-attaactgtcgagtcgaatttcgaactatactcgagttggttcggttcattgccagccctac 15933304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 18879986 - 18880040
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  18879986 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 18880040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 22921842 - 22921896
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  22921842 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 22921896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 27905889 - 27905943
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  27905889 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 27905943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 29327825 - 29327879
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  29327825 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 29327879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 3801416 - 3801363
Alignment:
Q  231 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||||||||    
T  3801416 tcgagtcgaattacgaactatattcgagttggttcggttcattgccagccctac 3801363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 29327901 - 29327983
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaatt-aannnnnnnaaaaaactaactcaaattgatttatatatata 183  Q
    ||||||||||||||||||  ||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||    
T  29327901 aagacaaaattgtattcaatcacatttgccacatttgaattaaattttttttaaaaactaactcaaattgatttatatatata 29327983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 38522915 - 38522855
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctacttata 289  Q
    ||||||||| |||  ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  38522915 tatcgagtcaaattacgaactatattcgagttggttcggttcattgccagccctacatata 38522855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 31620956 - 31621009
Alignment:
Q  231 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    ||||||||||| |||||||||| || |||||||||||||||||| |||||||||    
T  31620956 tcgagtcgaatttcgaactatattcaagttggttcggttcattgtcagccctac 31621009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 27450635 - 27450581
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| |||||| ||| |||||  ||||||||||||||||||||||||||||||    
T  27450635 tatcgaatcgaatctcgcactattttcgagttggttcggttcattgccagcccta 27450581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 19716271 - 19716318
Alignment:
Q  236 tcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| ||| |||||  ||||||||||||||||||||||||||||||    
T  19716271 tcgaatctcgcactattttcgagttggttcggttcattgccagcccta 19716318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 27196163 - 27196218
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    |||||| |||| | |||||||||  ||||||||||||||||||||| |||||||||    
T  27196163 tatcgaatcgagtctcgaactattttcgagttggttcggttcattgtcagccctac 27196218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 32156995 - 32156944
Alignment:
Q  234 agtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    ||||||||  ||||||||| |||| ||||||||||||||||| |||||||||    
T  32156995 agtcgaattacgaactatattcgaattggttcggttcattgcgagccctact 32156944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 31021949 - 31022003
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||| |  ||||||||| ||||||||||||||||||||| ||| ||||    
T  31021949 tatcgagtcgagttccgaactatattcgagttggttcggttcattgtcagtccta 31022003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 39409212 - 39409266
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| |||||| ||| |||||  |||||||||||||||||||| |||||||||    
T  39409212 tatcgaatcgaatctcgcactattttcgagttggttcggttcattaccagcccta 39409266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 20189074 - 20189115
Alignment:
Q  244 cgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||| ||||||||||| |||||||||||| ||||||||||    
T  20189074 cgaactctaatcgagttgattcggttcattgtcagccctact 20189115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 32945061 - 32945021
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||  ||||||||||||||||||||| ||||||||    
T  32945061 tcgaactattttcgagttggttcggttcattgtcagcccta 32945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 8200510 - 8200618
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||| ||||||||||||||||||||||||        | ||||||||||||||||||||||||||||||||||||||| |||||||    
T  8200510 aagacaaaattgtattcaaccacatttgccacatttgaattaattttttttataaactaactcaaattgatttatatatataatcgataatcgagccatc 8200609  T
Q  202 tcatgaacc 210  Q
    |||||||||    
T  8200610 tcatgaacc 8200618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 10346589 - 10346696
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnnaaaaaactaactcaaattgatttatatatataatcgataatcaagccatc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||||||| |||||| || ||||    
T  10346589 aagacaaaattgtattcagccacatttgccacatttgaattaaaaaattttaaaaaataactcaaattgatttatatatataatcaataatcgagtcatc 10346688  T
Q  202 tcatgaac 209  Q
    ||||||||    
T  10346689 tcatgaac 10346696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 10346781 - 10346861
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  10346781 tcatgaaccaagttcaacgg-attagatatagagtcgaatgtcgaactataatcgatttggtttggttcattgccagcccta 10346861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 8200691 - 8200771
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  8200691 tcatgaatcaagttcaacgg-attaaatatcgagtcgaatgtcgaactataatcgagttggtttggttcattgtcagcccta 8200771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 10346513 - 10346567
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  10346513 tccaacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 10346567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 8200434 - 8200488
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||  |||||||| |||||||||||||||||||||||||||||||||||    
T  8200434 tccaacaaagttcaattagctgtgaacaaaattcataatattcttttacttttaa 8200488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 284
Target Start/End: Complemental strand, 5640306 - 5640251
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctac 284  Q
    |||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||    
T  5640306 tatcgaatcgaattacgaactctaatcgagttggttcggttcattgccagccctac 5640251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 283
Target Start/End: Complemental strand, 10961833 - 10961796
Alignment:
Q  246 aactataatcgagttggttcggttcattgccagcccta 283  Q
    |||| |||||||||||||||||||||||||||||||||    
T  10961833 aactttaatcgagttggttcggttcattgccagcccta 10961796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 3081772 - 3081716
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||| |||| | |||||||||  ||||| ||||||||||||||||||||||||||    
T  3081772 tatcgaatcgagtatcgaactattttcgagctggttcggttcattgccagccctact 3081716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 13312124 - 13312164
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  13312124 tcgaactattttcgagttggttcggttcattgccagcccta 13312164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 4441341 - 4441301
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||  ||||||||||||||||||||||| ||||||    
T  4441341 tcgaactattgtcgagttggttcggttcattgccggcccta 4441301  T

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Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 32689229 - 32689309
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32689229 tcatgaaccaagttcaacgg-attagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagcccta 32689309  T

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Target: chr3; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 41609755 - 41609864
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnn-aaaaaactaactcaaattgatttatatatataatcgataatcaagccat 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||||||||| || |||    
T  41609755 aagacaaaattgtattcagccacatttgcctcatttgaattaattttttttaaaaaactaactcaaattgatttatatatataatcgataatcgagtcat 41609854  T
Q  201 ctcatgaacc 210  Q
    ||||||||||    
T  41609855 ctcatgaacc 41609864  T

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Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 23206580 - 23206471
Alignment:
Q  102 aagacaaaattgtattcagccacatttgccacatttgaattaannnnnnna-aaaaactaactcaaattgatttatatatataatcgataatcaagccat 200  Q
    |||||||||||||||| ||| ||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||  || |||    
T  23206580 aagacaaaattgtattaagcgacatttgccacatttgaattaatttttttttaaaaactaactcaaattgatttatatatataatcgataattgagtcat 23206481  T
Q  201 ctcatgaacc 210  Q
    ||||||||||    
T  23206480 ctcatgaacc 23206471  T

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Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 281
Target Start/End: Complemental strand, 23206388 - 23206310
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccc 281  Q
    |||||||| ||||||||| | |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23206388 tcatgaacaaagttcaacag-attaaatatcaagtcgaatgtcgaactataatcgagttggttcggttcattgccagccc 23206310  T

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Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 41609948 - 41610021
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 277  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41609948 tcatgaaccaagttcaacgg-attaaatatcgagtcgaatgtcgaactataatcgagttgg-tcggttcattgcca 41610021  T

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Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 19560854 - 19560772
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||||||||||||||||  ||||  | |||||||||||  ||||||||| ||||||||||||||||||||||||||||||||    
T  19560854 tcatgaaccaagttcaacga-attaattgtcgagtcgaattccgaactatattcgagttggttcggttcattgccagccctact 19560772  T

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Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 41609679 - 41609733
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  41609679 tccaacaaaattcaattagctgtgaacaaaattcataatattcttttacttttaa 41609733  T

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Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 32688972 - 32689024
Alignment:
Q  51 caacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  32688972 caacaaaattcaattagttgtgaacaaaattcataatattcttttacttttaa 32689024  T

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Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 23206656 - 23206602
Alignment:
Q  49 tccaacaaaaatcaattaggtgtgaacaaaattcataatattcttttacttttaa 103  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  23206656 tccaacaaaatttaattagctgtgaacaaaattcataatattcttttacttttaa 23206602  T

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Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 12710762 - 12710842
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||||||||||||| | | |  |||||| |||||| |||||||||  ||||||||||||||||||||||||||||||    
T  12710762 tcatgaaccaagttcaacgag-tcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgccagcccta 12710842  T

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Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 32689088 - 32689144
Alignment:
Q  153 aaaaactaactcaaattgatttatatatataatcgataatcaagccatctcatgaac 209  Q
    |||||||||||||||||||||||||||||||||| |||||  || ||||||||||||    
T  32689088 aaaaactaactcaaattgatttatatatataatcaataattgagtcatctcatgaac 32689144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 9505201 - 9505118
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctactt 286  Q
    ||||||||||||||||||| | |||  | |||| |||| |  ||||||||  |||||||||||||||||||||||||||||||||    
T  9505201 tcatgaaccaagttcaacgag-ttaattgtcgaatcgagttccgaactattgtcgagttggttcggttcattgccagccctactt 9505118  T

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Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 282
Target Start/End: Complemental strand, 26049620 - 26049541
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccct 282  Q
    |||||||||||||||||| || | |  |||||| |||||| || ||||||  |||||||||||||||||||||||||||||    
T  26049620 tcatgaaccaagttcaacagg-tcaattatcgaatcgaatctcaaactattttcgagttggttcggttcattgccagccct 26049541  T

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Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 54393495 - 54393443
Alignment:
Q  231 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||| ||||||  |||||| |||||||||||||||||||||||||||||||||    
T  54393495 tcgaatcgaattacgaactttaatcgagttggttcggttcattgccagcccta 54393443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 284
Target Start/End: Original strand, 25253805 - 25253843
Alignment:
Q  246 aactataatcgagttggttcggttcattgccagccctac 284  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  25253805 aactatattcgagttggttcggttcattgccagccctac 25253843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 283
Target Start/End: Complemental strand, 54432231 - 54432177
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||| |||| | |||||||||  ||||||||||||||||||||||||||||||    
T  54432231 tatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagcccta 54432177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 39135442 - 39135494
Alignment:
Q  231 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||   |||||||| |||||||||||||||| |||||||||||||    
T  39135442 tcgagtcgaattatgaactatattcgagttggttcggtttattgccagcccta 39135494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 283
Target Start/End: Original strand, 30743673 - 30743712
Alignment:
Q  244 cgaactataatcgagttggttcggttcattgccagcccta 283  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  30743673 cgaactatattcgagttggttcggttcatttccagcccta 30743712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 39469585 - 39469526
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctacttat 288  Q
    |||||| ||||||  ||||||||| |||||||||||| |||||||  |||||||||||||    
T  39469585 tatcgaatcgaattacgaactatattcgagttggttcagttcattatcagccctacttat 39469526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 39942880 - 39942806
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 277  Q
    |||||||||||||||||| | ||||  |  ||| |||||| |||||||||| |||||||||||| |||||||||||    
T  39942880 tcatgaaccaagttcaacag-attaattgccgaatcgaatttcgaactatactcgagttggttcagttcattgcca 39942806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 44574626 - 44574669
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagccctactt 286  Q
    |||||||||| ||||||||  |||||||||||||||||||||||    
T  44574626 tcgaactatattcgagttgtctcggttcattgccagccctactt 44574669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 284
Target Start/End: Complemental strand, 33438768 - 33438730
Alignment:
Q  246 aactataatcgagttggttcggttcattgccagccctac 284  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  33438768 aactttaatcgagttggttcggttcattgtcagccctac 33438730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 46293262 - 46293213
Alignment:
Q  234 agtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||| | |||||||| |||||||| |||||||||||| ||||||||    
T  46293262 agtcgaattttgaactatattcgagttgattcggttcattgtcagcccta 46293213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 284
Target Start/End: Complemental strand, 53529649 - 53529616
Alignment:
Q  251 taatcgagttggttcggttcattgccagccctac 284  Q
    ||||||||||||||||||||||||||| ||||||    
T  53529649 taatcgagttggttcggttcattgccacccctac 53529616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 40943661 - 40943701
Alignment:
Q  243 tcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||  |||||||||||||||| |||||||||||||    
T  40943661 tcgaactattttcgagttggttcggtttattgccagcccta 40943701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 45714784 - 45714832
Alignment:
Q  231 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagc 279  Q
    |||| ||||||  |||||| ||||||||||||||| |||||||||||||    
T  45714784 tcgaatcgaataacgaactttaatcgagttggttcagttcattgccagc 45714832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 277
Target Start/End: Complemental strand, 124533 - 124487
Alignment:
Q  231 tcgagtcgaatgtcgaactataatcgagttggttcggttcattgcca 277  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||||||    
T  124533 tcgagtcaaatttcgaactatattcgagttggttcggttcattgcca 124487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 283
Target Start/End: Original strand, 21147 - 21227
Alignment:
Q  202 tcatgaaccaagttcaacgggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcccta 283  Q
    |||||||||||||||||||  || |  |||||| |||| | |||||||||  ||||||||||||||||||||| ||||||||    
T  21147 tcatgaaccaagttcaacga-atcaattatcgaatcgagtctcgaactattttcgagttggttcggttcattgtcagcccta 21227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 7362 - 7306
Alignment:
Q  229 tatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctact 285  Q
    |||||| ||||||  |||||  ||||||| ||||||||||||||||||| |||||||    
T  7362 tatcgaatcgaattacgaacactaatcgaattggttcggttcattgccacccctact 7306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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