View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1280_low_40 (Length: 221)
Name: NF1280_low_40
Description: NF1280
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1280_low_40 |
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Alignment Details
Target: chr7 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 36774313 - 36774447
Alignment:
| Q |
1 |
ttgctaactacggaaatttcaaagaactatggtggtcggttgaagtggaagcattttgttctatcacacttttgttcaccactaa---tttattaaactc |
97 |
Q |
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| T |
36774313 |
ttgctaactacggaaatttcaaagaactatggtggtcggttgaagtggaagcattttgttctatcacacttttgttcacccctaattttttattaaactc |
36774412 |
T |
|
| Q |
98 |
aaaaacagttttgtttagaataaattacactctct |
132 |
Q |
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|||||||||||||| |||| ||||||||||||||| |
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| T |
36774413 |
aaaaacagttttgtctagagtaaattacactctct |
36774447 |
T |
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