View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1281-Insertion-3 (Length: 235)
Name: NF1281-Insertion-3
Description: NF1281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1281-Insertion-3 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 12 - 235
Target Start/End: Original strand, 21558334 - 21558558
Alignment:
| Q |
12 |
ccacatgaacaacccaaatccaccaccacaaatggaatgttagggtcatgaagctcaactttatctagtgcttcttttagaaggtgaagcattgactttg |
111 |
Q |
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| T |
21558334 |
ccacatgaacaacccaaatccaccaccacaaatggaatgttagggtcatgaagctcaactttatctagtgcttcttttagaaggtgaagcattgactttg |
21558433 |
T |
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| Q |
112 |
catgtatggcctacaaatacatgatat-attcaattaattattttgaaaaacatgtgattagaaattatttgcatgtattagattcatattgaccctaca |
210 |
Q |
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| T |
21558434 |
catgtatggcctacaaatacatgatataattcaattaattattttgaaaaacatgtgattagaaattatttgcatgtattagattcatattgaccctaca |
21558533 |
T |
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| Q |
211 |
agccaacttgtcccaccagtcacca |
235 |
Q |
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| T |
21558534 |
agccaacttgtcccaccagtcacca |
21558558 |
T |
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