View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1281-Insertion-4 (Length: 181)
Name: NF1281-Insertion-4
Description: NF1281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1281-Insertion-4 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 7 - 144
Target Start/End: Original strand, 9425297 - 9425434
Alignment:
| Q |
7 |
aagaagtacaacccaatttcacaaaaatagattagtataaaaaa-tgcaataaatccaatttgatatcagaagaaacaaagataaccctttggtatgaag |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
9425297 |
aagaagtacaacccaatttcacaaaaatagattagtataaaaaaatgcaataaatccaatttgatatcagaagaaacaaagata-ccctttggtatgaag |
9425395 |
T |
|
| Q |
106 |
cttcacaaaccttggtctcaatttattaaattcatttat |
144 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9425396 |
cttcacaaaccttggtctcaatttattaaattcatttat |
9425434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 5371 times since January 2019
Visitors: 1270