View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12813_low_12 (Length: 266)
Name: NF12813_low_12
Description: NF12813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12813_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 46146364 - 46146621
Alignment:
| Q |
1 |
aaacagaactttaatcaacaagatatgttacaacatctagcaggcaagcatcaaagagaaagaggaactattgtagtatagattgtaaaagtagagaagt |
100 |
Q |
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| T |
46146364 |
aaacagaactttaatcaacaagatatgttacaacatctagcaggcaagcatcaaagagaaagaggaactattgtagtatagattgtaaaagtagagaagt |
46146463 |
T |
|
| Q |
101 |
gaaatgaaggtatactcacgctaaaccttcagctgcaccaactgttatgctcattcttctaggccaatctagtaaacaatctgaagcaagttgaccatgt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
46146464 |
gaaatgaaggtatactcacgctaaaccttcagctgcaccaactgttatgctcattcttctaggccaatcaagtaaacaatctgaagcaagttgaccatgt |
46146563 |
T |
|
| Q |
201 |
aaatgagtgagcaagctatgattaggcatgtaatcatacacaattaacctttcatctc |
258 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
46146564 |
aaatgagtgagcaagctatgattagacatgtaatcatacacaattaacctttcatctc |
46146621 |
T |
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