View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12813_low_4 (Length: 489)

Name: NF12813_low_4
Description: NF12813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12813_low_4
NF12813_low_4
[»] chr3 (64 HSPs)
chr3 (228-487)||(5452421-5452680)
chr3 (226-478)||(5444024-5444275)
chr3 (7-229)||(5451925-5452144)
chr3 (245-480)||(20341327-20341549)
chr3 (394-487)||(5500673-5500766)
chr3 (387-487)||(5851181-5851281)
chr3 (389-487)||(5482426-5482524)
chr3 (143-229)||(52123954-52124040)
chr3 (144-229)||(41451894-41451979)
chr3 (396-482)||(5487858-5487944)
chr3 (144-229)||(24734801-24734886)
chr3 (140-229)||(28529347-28529436)
chr3 (396-487)||(5830360-5830451)
chr3 (140-229)||(29588728-29588817)
chr3 (394-482)||(5523541-5523629)
chr3 (396-487)||(5804615-5804706)
chr3 (152-223)||(20493452-20493523)
chr3 (140-223)||(50156655-50156738)
chr3 (140-229)||(37776698-37776787)
chr3 (394-482)||(5856222-5856310)
chr3 (146-229)||(18427153-18427234)
chr3 (140-223)||(20791398-20791481)
chr3 (140-223)||(46450168-46450250)
chr3 (144-229)||(29388593-29388678)
chr3 (138-209)||(43016529-43016600)
chr3 (146-216)||(27243155-27243225)
chr3 (149-221)||(2419468-2419540)
chr3 (145-209)||(15790370-15790434)
chr3 (155-223)||(46161049-46161117)
chr3 (140-223)||(14236121-14236204)
chr3 (140-223)||(39186066-39186149)
chr3 (140-229)||(48351532-48351621)
chr3 (55-123)||(5443767-5443835)
chr3 (149-229)||(8824983-8825063)
chr3 (145-197)||(27243047-27243099)
chr3 (153-229)||(29755596-29755672)
chr3 (150-205)||(49418424-49418479)
chr3 (277-351)||(5856329-5856403)
chr3 (138-216)||(44844091-44844169)
chr3 (170-223)||(24429050-24429103)
chr3 (144-223)||(742058-742135)
chr3 (144-223)||(752494-752571)
chr3 (167-223)||(55452037-55452093)
chr3 (152-223)||(38138589-38138660)
chr3 (173-223)||(10948588-10948638)
chr3 (167-229)||(41387657-41387719)
chr3 (144-190)||(52951377-52951423)
chr3 (144-197)||(38928007-38928060)
chr3 (278-350)||(5500572-5500644)
chr3 (149-197)||(24748913-24748961)
chr3 (149-193)||(34918403-34918447)
chr3 (160-223)||(38414749-38414812)
chr3 (146-197)||(52951486-52951537)
chr3 (139-197)||(28529249-28529307)
chr3 (139-197)||(37600123-37600181)
chr3 (278-347)||(5523440-5523509)
chr3 (138-179)||(10769869-10769910)
chr3 (144-189)||(20493579-20493624)
chr3 (144-197)||(46575949-46576002)
chr3 (146-214)||(46576060-46576126)
chr3 (167-211)||(138877-138921)
chr3 (147-223)||(2009096-2009172)
chr3 (139-179)||(29775135-29775175)
chr3 (139-223)||(41707435-41707517)
[»] chr4 (58 HSPs)
chr4 (138-229)||(8109052-8109143)
chr4 (151-223)||(754586-754658)
chr4 (152-223)||(722259-722330)
chr4 (140-229)||(43771222-43771311)
chr4 (135-223)||(39471259-39471347)
chr4 (140-223)||(26361303-26361386)
chr4 (140-229)||(50164491-50164580)
chr4 (138-229)||(20454634-20454725)
chr4 (139-229)||(24834674-24834764)
chr4 (149-223)||(40991593-40991667)
chr4 (137-229)||(47009285-47009377)
chr4 (140-223)||(24938410-24938493)
chr4 (140-223)||(38537508-38537591)
chr4 (140-216)||(19447241-19447317)
chr4 (139-229)||(45310942-45311032)
chr4 (141-228)||(11895134-11895222)
chr4 (138-214)||(22542492-22542568)
chr4 (138-221)||(49242274-49242357)
chr4 (140-229)||(31250877-31250967)
chr4 (139-229)||(34129394-34129484)
chr4 (140-229)||(52279254-52279343)
chr4 (139-206)||(43124508-43124575)
chr4 (137-221)||(1559906-1559990)
chr4 (139-223)||(49077351-49077435)
chr4 (167-213)||(33653511-33653557)
chr4 (155-229)||(37451023-37451097)
chr4 (160-216)||(25719127-25719183)
chr4 (141-217)||(51904611-51904687)
chr4 (134-216)||(19321867-19321947)
chr4 (139-190)||(37315559-37315610)
chr4 (146-207)||(13070059-13070120)
chr4 (140-197)||(27654474-27654531)
chr4 (163-228)||(29699585-29699650)
chr4 (149-210)||(52671945-52672006)
chr4 (149-217)||(5545687-5545755)
chr4 (141-217)||(5994863-5994939)
chr4 (139-211)||(18421825-18421897)
chr4 (145-197)||(40812039-40812091)
chr4 (144-223)||(19933475-19933554)
chr4 (139-178)||(20225349-20225388)
chr4 (140-219)||(35179717-35179795)
chr4 (139-229)||(46287537-46287627)
chr4 (139-197)||(8108952-8109010)
chr4 (141-207)||(27654596-27654662)
chr4 (146-207)||(43958268-43958327)
chr4 (140-197)||(24106773-24106830)
chr4 (144-197)||(43771127-43771180)
chr4 (162-223)||(45081759-45081820)
chr4 (144-197)||(47237867-47237920)
chr4 (184-229)||(50481584-50481629)
chr4 (148-197)||(51206172-51206221)
chr4 (187-223)||(20225383-20225419)
chr4 (148-196)||(20454545-20454593)
chr4 (144-196)||(30033341-30033393)
chr4 (160-212)||(37050643-37050695)
chr4 (140-223)||(38636439-38636520)
chr4 (144-196)||(39016793-39016845)
chr4 (145-229)||(48339340-48339424)
[»] chr8 (38 HSPs)
chr8 (140-229)||(16983490-16983579)
chr8 (130-229)||(1977158-1977257)
chr8 (140-229)||(17499230-17499317)
chr8 (139-229)||(6098771-6098861)
chr8 (152-229)||(24055932-24056009)
chr8 (143-214)||(34861190-34861261)
chr8 (160-229)||(7493357-7493426)
chr8 (147-197)||(5980007-5980057)
chr8 (139-229)||(8903948-8904038)
chr8 (144-229)||(13407322-13407408)
chr8 (144-223)||(35151728-35151807)
chr8 (139-229)||(13214591-13214681)
chr8 (140-229)||(9952753-9952841)
chr8 (140-229)||(28413865-28413953)
chr8 (152-213)||(36804846-36804907)
chr8 (139-211)||(5095754-5095826)
chr8 (167-223)||(32072199-32072255)
chr8 (173-221)||(43506639-43506687)
chr8 (167-229)||(8914867-8914929)
chr8 (167-221)||(41727534-41727588)
chr8 (140-181)||(1961402-1961443)
chr8 (139-220)||(34952548-34952629)
chr8 (146-223)||(45246536-45246613)
chr8 (139-211)||(5727346-5727418)
chr8 (167-223)||(14236440-14236496)
chr8 (139-194)||(11574160-11574215)
chr8 (140-223)||(23685233-23685312)
chr8 (152-229)||(4675002-4675079)
chr8 (135-183)||(5732692-5732740)
chr8 (151-211)||(17915926-17915986)
chr8 (145-188)||(8671086-8671129)
chr8 (139-197)||(39023508-39023564)
chr8 (146-216)||(6387671-6387741)
chr8 (144-198)||(31691636-31691690)
chr8 (140-229)||(9193478-9193567)
chr8 (144-229)||(11962681-11962765)
chr8 (167-223)||(35797497-35797551)
chr8 (144-208)||(38091468-38091532)
[»] chr6 (32 HSPs)
chr6 (140-229)||(34905432-34905521)
chr6 (140-214)||(1392738-1392812)
chr6 (140-229)||(16851968-16852057)
chr6 (153-229)||(32112725-32112801)
chr6 (140-223)||(21987394-21987477)
chr6 (143-229)||(5106394-5106480)
chr6 (139-229)||(10133152-10133242)
chr6 (140-229)||(16187429-16187516)
chr6 (167-221)||(31116146-31116200)
chr6 (137-221)||(12753752-12753836)
chr6 (142-229)||(12780758-12780843)
chr6 (139-223)||(32598942-32599026)
chr6 (143-229)||(16187650-16187734)
chr6 (153-229)||(8441857-8441933)
chr6 (153-229)||(8450661-8450737)
chr6 (167-229)||(445914-445976)
chr6 (167-229)||(2675991-2676053)
chr6 (140-229)||(12784934-12785023)
chr6 (141-229)||(17144669-17144755)
chr6 (140-223)||(16436166-16436249)
chr6 (139-197)||(19090208-19090266)
chr6 (144-197)||(19737433-19737486)
chr6 (137-184)||(900040-900087)
chr6 (149-196)||(34231871-34231918)
chr6 (146-197)||(35128849-35128900)
chr6 (139-173)||(16257463-16257497)
chr6 (167-229)||(32122891-32122953)
chr6 (144-197)||(34905337-34905390)
chr6 (144-196)||(10060860-10060912)
chr6 (149-197)||(10060988-10061036)
chr6 (146-190)||(19305789-19305833)
chr6 (153-197)||(32439486-32439530)
[»] chr2 (50 HSPs)
chr2 (146-223)||(12989293-12989370)
chr2 (140-229)||(26767756-26767845)
chr2 (146-229)||(38464259-38464342)
chr2 (143-229)||(45554655-45554741)
chr2 (140-229)||(6980115-6980204)
chr2 (141-220)||(35316397-35316476)
chr2 (140-229)||(9470177-9470265)
chr2 (146-221)||(10981622-10981695)
chr2 (139-213)||(472157-472231)
chr2 (139-229)||(19639189-19639279)
chr2 (139-229)||(19837782-19837872)
chr2 (148-221)||(4552843-4552916)
chr2 (144-228)||(44274331-44274415)
chr2 (144-229)||(32856134-32856219)
chr2 (140-229)||(36471833-36471922)
chr2 (138-207)||(42579649-42579718)
chr2 (139-229)||(11539521-11539612)
chr2 (146-229)||(25238278-25238361)
chr2 (145-223)||(14489539-14489617)
chr2 (139-217)||(19193496-19193574)
chr2 (138-207)||(15508909-15508978)
chr2 (168-229)||(30718350-30718411)
chr2 (148-208)||(2122912-2122972)
chr2 (174-218)||(27494480-27494524)
chr2 (147-217)||(6420456-6420526)
chr2 (139-229)||(15884525-15884615)
chr2 (147-229)||(34142141-34142223)
chr2 (139-197)||(37228494-37228552)
chr2 (140-217)||(19953504-19953581)
chr2 (144-197)||(42182890-42182943)
chr2 (137-217)||(17460974-17461054)
chr2 (144-207)||(1110199-1110262)
chr2 (186-229)||(7919311-7919354)
chr2 (140-229)||(12098863-12098951)
chr2 (139-229)||(24497288-24497376)
chr2 (141-218)||(43414462-43414538)
chr2 (139-197)||(28898163-28898221)
chr2 (140-197)||(31494205-31494260)
chr2 (139-197)||(41546153-41546211)
chr2 (135-197)||(43400125-43400187)
chr2 (144-197)||(4964671-4964724)
chr2 (140-197)||(20459032-20459089)
chr2 (144-197)||(27968919-27968972)
chr2 (144-197)||(28091615-28091668)
chr2 (144-197)||(28101847-28101900)
chr2 (140-205)||(30706390-30706455)
chr2 (144-197)||(45554568-45554621)
chr2 (149-213)||(30849349-30849412)
chr2 (140-216)||(38104358-38104433)
chr2 (141-217)||(44152340-44152415)
[»] chr7 (54 HSPs)
chr7 (144-228)||(27949370-27949454)
chr7 (140-229)||(6442261-6442350)
chr7 (144-223)||(27888384-27888463)
chr7 (136-229)||(46517387-46517480)
chr7 (139-229)||(11824167-11824255)
chr7 (139-229)||(22190035-22190125)
chr7 (141-229)||(25686831-25686919)
chr7 (145-216)||(6580002-6580073)
chr7 (140-223)||(48374434-48374517)
chr7 (144-220)||(39254188-39254264)
chr7 (167-229)||(12263458-12263520)
chr7 (140-214)||(32212865-32212939)
chr7 (143-229)||(44350800-44350886)
chr7 (140-223)||(14795233-14795314)
chr7 (140-223)||(15242225-15242306)
chr7 (143-229)||(11692275-11692361)
chr7 (141-218)||(7459450-7459527)
chr7 (135-220)||(36845481-36845566)
chr7 (140-216)||(17749804-17749880)
chr7 (161-229)||(19422850-19422918)
chr7 (140-216)||(24539117-24539193)
chr7 (151-211)||(32205190-32205250)
chr7 (158-213)||(7774956-7775011)
chr7 (160-223)||(27320476-27320539)
chr7 (149-220)||(30742544-30742615)
chr7 (137-223)||(31628101-31628187)
chr7 (164-229)||(32178823-32178888)
chr7 (150-221)||(33008208-33008276)
chr7 (141-209)||(7775115-7775183)
chr7 (167-223)||(31874118-31874174)
chr7 (167-217)||(12167315-12167365)
chr7 (147-217)||(38065328-38065398)
chr7 (140-213)||(2911874-2911947)
chr7 (146-197)||(45909585-45909636)
chr7 (144-197)||(24539249-24539302)
chr7 (138-211)||(33008099-33008172)
chr7 (185-229)||(31502504-31502548)
chr7 (160-215)||(10933980-10934035)
chr7 (146-217)||(20954788-20954859)
chr7 (157-211)||(1316387-1316440)
chr7 (135-197)||(17354653-17354715)
chr7 (139-197)||(19840878-19840936)
chr7 (138-179)||(13919775-13919816)
chr7 (144-189)||(13919917-13919962)
chr7 (144-197)||(17749695-17749748)
chr7 (144-197)||(25428605-25428658)
chr7 (152-197)||(26190032-26190077)
chr7 (144-197)||(26703438-26703491)
chr7 (144-197)||(27888283-27888336)
chr7 (144-197)||(31502590-31502643)
chr7 (143-223)||(31759865-31759943)
chr7 (139-179)||(10619535-10619575)
chr7 (144-188)||(22786152-22786196)
chr7 (144-188)||(42863569-42863613)
[»] scaffold0018 (1 HSPs)
scaffold0018 (139-223)||(27914-27998)
[»] chr1 (61 HSPs)
chr1 (139-229)||(8899110-8899200)
chr1 (139-229)||(10659763-10659852)
chr1 (139-229)||(11987722-11987812)
chr1 (144-229)||(41948145-41948230)
chr1 (145-213)||(26980262-26980330)
chr1 (144-219)||(16948528-16948603)
chr1 (144-229)||(30678910-30678995)
chr1 (140-211)||(39974195-39974266)
chr1 (163-229)||(33193146-33193212)
chr1 (140-229)||(19101596-19101685)
chr1 (140-229)||(28218041-28218132)
chr1 (153-212)||(25543452-25543511)
chr1 (143-229)||(6133623-6133708)
chr1 (160-229)||(37552966-37553033)
chr1 (167-229)||(41958179-41958241)
chr1 (148-229)||(8741226-8741307)
chr1 (140-205)||(21466615-21466680)
chr1 (149-221)||(32211788-32211860)
chr1 (146-223)||(12767329-12767406)
chr1 (139-223)||(2225326-2225410)
chr1 (140-192)||(39019700-39019752)
chr1 (145-229)||(51732373-51732456)
chr1 (140-215)||(13114664-13114739)
chr1 (139-221)||(15928659-15928739)
chr1 (144-223)||(27570327-27570406)
chr1 (160-222)||(15468323-15468385)
chr1 (167-229)||(35336956-35337018)
chr1 (144-215)||(931484-931555)
chr1 (139-211)||(32848695-32848767)
chr1 (148-223)||(33059896-33059971)
chr1 (144-182)||(13889287-13889325)
chr1 (140-223)||(15523312-15523391)
chr1 (140-223)||(15531306-15531385)
chr1 (140-223)||(22540470-22540549)
chr1 (139-197)||(28274782-28274840)
chr1 (167-229)||(29673571-29673633)
chr1 (167-229)||(44272014-44272076)
chr1 (179-221)||(47644331-47644373)
chr1 (144-197)||(11430569-11430622)
chr1 (144-197)||(13388335-13388388)
chr1 (144-197)||(26980388-26980441)
chr1 (144-196)||(13114797-13114849)
chr1 (169-229)||(45179270-45179330)
chr1 (146-229)||(28941918-28942000)
chr1 (160-210)||(46806729-46806777)
chr1 (144-198)||(931375-931429)
chr1 (139-197)||(11135735-11135793)
chr1 (154-212)||(15661005-15661063)
chr1 (138-196)||(36567019-36567077)
chr1 (144-190)||(44739119-44739165)
chr1 (144-229)||(33114067-33114152)
chr1 (144-189)||(41095743-41095788)
chr1 (144-197)||(41917996-41918049)
chr1 (144-197)||(50773109-50773162)
chr1 (134-198)||(5291607-5291671)
chr1 (145-197)||(11135868-11135920)
chr1 (140-196)||(21977184-21977240)
chr1 (144-196)||(25543341-25543393)
chr1 (144-188)||(41095607-41095651)
chr1 (140-216)||(50424860-50424936)
chr1 (144-184)||(50539525-50539565)
[»] chr5 (39 HSPs)
chr5 (150-223)||(28490727-28490800)
chr5 (144-229)||(34368456-34368541)
chr5 (140-229)||(41105565-41105654)
chr5 (144-223)||(28611777-28611856)
chr5 (140-223)||(30325870-30325952)
chr5 (167-229)||(10141998-10142060)
chr5 (140-216)||(12076057-12076133)
chr5 (140-229)||(37455445-37455537)
chr5 (167-223)||(43405495-43405551)
chr5 (141-223)||(5413730-5413815)
chr5 (140-229)||(41330390-41330477)
chr5 (160-229)||(28223791-28223860)
chr5 (141-190)||(32401253-32401302)
chr5 (140-229)||(28434817-28434902)
chr5 (140-223)||(36337882-36337968)
chr5 (144-223)||(17434849-17434927)
chr5 (167-229)||(25710494-25710556)
chr5 (144-197)||(4959279-4959332)
chr5 (149-218)||(5465656-5465725)
chr5 (141-218)||(34384687-34384764)
chr5 (172-223)||(14553614-14553665)
chr5 (140-223)||(27592447-27592530)
chr5 (167-229)||(17537124-17537186)
chr5 (138-196)||(42224718-42224776)
chr5 (140-229)||(4714845-4714934)
chr5 (139-207)||(40971569-40971637)
chr5 (140-211)||(1923547-1923618)
chr5 (154-217)||(25002014-25002077)
chr5 (183-230)||(39246703-39246750)
chr5 (139-186)||(40926184-40926231)
chr5 (146-197)||(40971453-40971504)
chr5 (139-197)||(26072232-26072290)
chr5 (144-190)||(34368361-34368407)
chr5 (160-205)||(2935449-2935494)
chr5 (160-229)||(25919307-25919376)
chr5 (146-214)||(2201589-2201657)
chr5 (140-176)||(10300052-10300088)
chr5 (140-188)||(20159389-20159437)
chr5 (173-209)||(41511772-41511808)
[»] scaffold0005 (2 HSPs)
scaffold0005 (140-197)||(296833-296890)
scaffold0005 (135-205)||(296957-297027)
[»] scaffold0194 (1 HSPs)
scaffold0194 (140-228)||(8406-8494)
[»] scaffold0016 (1 HSPs)
scaffold0016 (141-220)||(204704-204783)
[»] scaffold0008 (1 HSPs)
scaffold0008 (139-197)||(121195-121252)
[»] scaffold0204 (1 HSPs)
scaffold0204 (145-229)||(26862-26946)


Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 228 - 487
Target Start/End: Original strand, 5452421 - 5452680
Alignment:
Q  228 aaccaaattcttttgcacatttttaacagtgtttcatccatataagtaatcacagtcgcactctatcttgcctctaaaaatgagaatgaagcttcatttc 327  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||     
T  5452421 aaccaaattctttagcacatttttaacagtatttcatccatataagtaatcacagtcgcactctatcttgcctctaacaatgagattgaagcttcattta 5452520  T
Q  328 ctgaacaccctttagatgaagatcctgtgctgattgtattattattagtatcattatcatttcctccgtagaacccgggttcacttggttttgggagtaa 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5452521 ctgaacaccctttagatgaagatcctgtgctgattgtattattattaatattattatcacttcctccgtagaacccgggttcacttggttttgggagtaa 5452620  T
Q  428 cttttcgccctttaacataaaaaccgcagatgacatgttaggcctattttctggtctctg 487  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  5452621 cttttcgccctttaacataaaaaccacagatgacatgttaggcctattttctggtttctg 5452680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 226 - 478
Target Start/End: Original strand, 5444024 - 5444275
Alignment:
Q  226 aaaaccaaattcttttgcacatttttaacagtgtttcatccatataagtaatcacagtcgcactctatcttgcctctaaaaatgagaatgaagcttcatt 325  Q
    ||||||||||||||  |||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||| ||||||| ||||||||||||    
T  5444024 aaaaccaaattcttcagcacatttttaacagtatttcatccatacaagta-tcacagtcacactctatcttgcctctaacaatgagattgaagcttcatt 5444122  T
Q  326 tcctgaacaccctttagatgaagatcctgtgctgattgtattattattagtatcattatcatttcctccgtagaacccgggttcacttggttttgggagt 425  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| || |||    
T  5444123 tactgaacaccctttagatgaagatcctgtgctgattgtattattattaatatcattatctcttcctccgtagaacccgggttcacttggtttcggaagt 5444222  T
Q  426 aacttttcgccctttaacataaaaaccgcagatgacatgttaggcctattttc 478  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  5444223 aacttttcgccctttaacataaaaaccaccgatgacatgttaggcctattttc 5444275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 5451925 - 5452144
Alignment:
Q  7 gcaacatcagtcatggttccacataaacaatcacattccataccccgtaaaaggagattttagatagcaaactattctacaaatggtcaacacatgttca 106  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5451925 gcaacatcggtcatggttccacataaacaatcacattccataccc-gtaaaaggagattttagatagcaaactattctacaaatggtcaacacatattca 5452023  T
Q  107 atttggagtacgcaagtaagccgattctattttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatc 206  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  5452024 atttggagtacgcaagtaagccgattccagtttgagtaatgctagcaacactctcttttgaacactctctccaatactcgctctcttattgatttaaatc 5452123  T
Q  207 attgtgggtctacacttagaaaa 229  Q
     |  |||||||||||||||||||    
T  5452124 ct--tgggtctacacttagaaaa 5452144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 245 - 480
Target Start/End: Original strand, 20341327 - 20341549
Alignment:
Q  245 catttttaacagtgtttcatccatataagtaatcacagtcgcactctatcttgcctctaaaaatgagaatgaagcttcatttcctgaacaccctttagat 344  Q
    ||||||||||| | |||||||||| |||||  ||||||| ||| ||||||  |||||||| ||||||| |||||||||||||  ||||||| |||| ||     
T  20341327 catttttaacaatatttcatccatttaagtg-tcacagtggcattctatcgggcctctaacaatgagactgaagcttcatttattgaacacacttttgaa 20341425  T
Q  345 gaagatcctgtgctgattgtattattattagtatcattatcatttcctccgtagaacccgggttcacttggttttgggagtaacttttcgccctttaaca 444  Q
    |||||| |||| ||||||||||| ||||            |  ||||| | |||||||| |||||||||||| ||||||||||||| || ||||||||||    
T  20341426 gaagatgctgttctgattgtattgttat------------ctcttcctgcatagaacccaggttcacttggtgttgggagtaacttctcaccctttaaca 20341513  T
Q  445 taaaaaccgcagatgacatgttaggcctattttctg 480  Q
    |||||||| |||||||||||||||||||||||||||    
T  20341514 taaaaaccacagatgacatgttaggcctattttctg 20341549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 394 - 487
Target Start/End: Original strand, 5500673 - 5500766
Alignment:
Q  394 cgtagaacccgggttcacttggttttgggagtaacttttcgccctttaacataaaaaccgcagatgacatgttaggcctattttctggtctctg 487  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  5500673 cgtagaacccgggttcacttggtttcggaagtaacttttcaccctttaacataaaaaccacagatgacatgttaggcctattttctggtttctg 5500766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 387 - 487
Target Start/End: Complemental strand, 5851281 - 5851181
Alignment:
Q  387 tttcctccgtagaacccgggttcacttggttttgggagtaacttttcgccctttaacataaaaaccgcagatgacatgttaggcctattttctggtctct 486  Q
    |||||| ||||||||||||||| ||||||||| |||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  5851281 tttcctgcgtagaacccgggtttacttggtttggggagtaaattttcaccctttagcataaaaaccgcagatgacatgttaggcctattttctggtttct 5851182  T
Q  487 g 487  Q
    |    
T  5851181 g 5851181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 389 - 487
Target Start/End: Original strand, 5482426 - 5482524
Alignment:
Q  389 tcctccgtagaacccgggttcacttggttttgggagtaacttttcgccctttaacataaaaaccgcagatgacatgttaggcctattttctggtctctg 487  Q
    |||| ||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  5482426 tcctgcgtagaacccgggttcatttggtttggggagtaaattttcaccctttaacataaaaaccacagatgacatgttaggcctattttctggtttctg 5482524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 52123954 - 52124040
Alignment:
Q  143 taatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  52123954 taatgctagcaacactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaa 52124040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 41451894 - 41451979
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  41451894 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctactctttgaaaa 41451979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 396 - 482
Target Start/End: Original strand, 5487858 - 5487944
Alignment:
Q  396 tagaacccgggttcacttggttttgggagtaacttttcgccctttaacataaaaaccgcagatgacatgttaggcctattttctggt 482  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  5487858 tagaacccgggttcatttggtttggggagtaacttttcaccctttaacataaagaccacagatgacatgttaggcctattttctggt 5487944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 24734886 - 24734801
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||| |||||    
T  24734886 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggcctactctttgaaaa 24734801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 28529436 - 28529347
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||| || ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  28529436 gagtaatgttaacaacactctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaa 28529347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 5830451 - 5830360
Alignment:
Q  396 tagaacccgggttcacttggttttgggagtaacttttcgccctttaacataaaaaccgcagatgacatgttaggcctattttctggtctctg 487  Q
    ||||||||||||| ||||||||| |||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  5830451 tagaacccgggtttacttggtttggggagtaaattttcacccttcaacataaaaaccacagatgacatgttaggcctattttctggtttctg 5830360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 29588728 - 29588817
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||| || | | ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  29588728 gagtaatgctagtaaaattctcttttgaacactctctataacactcactctcttattgatttaaatcattgtgggtctacactttgaaaa 29588817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 5523541 - 5523629
Alignment:
Q  394 cgtagaacccgggttcacttggttttgggagtaacttttcgccctttaacataaaaaccgcagatgacatgttaggcctattttctggt 482  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||||||||||||| ||| |||||||||| |||||||||| |||||||    
T  5523541 cgtagaacccgggttcatttggtttcgggagtaacttttcaccctttaacataaagaccacagatgacatattaggcctatcttctggt 5523629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 5804706 - 5804615
Alignment:
Q  396 tagaacccgggttcacttggttttgggagtaacttttcgccctttaacataaaaaccgcagatgacatgttaggcctattttctggtctctg 487  Q
    ||||| || |||| ||||||||| |||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  5804706 tagaagccaggtttacttggtttggggagtaaattttcaccctttaacataaaaaccacagatgacatgttaggcctattttctggtttctg 5804615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 20493452 - 20493523
Alignment:
Q  152 caacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  20493452 caacactctcttttgaacactctctctattactcactctcttattggtttaaatcattgtgggtctacactt 20493523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 50156655 - 50156738
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||| || | ||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||    
T  50156655 gagtaatgttatcgacactttcttttgaacactctttgtaatactcactctcttattggtttaaatcattgtgggtctacactt 50156738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 37776698 - 37776787
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||||||| | || ||||||| |||||||||||||||||||||| || ||||||||||||| ||||||||||| |||||    
T  37776698 gagtaatgctagcaacactcttttatgaacaccctctctaatactcactctcttagtggtttaaatcattgtaggtctacactttgaaaa 37776787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 394 - 482
Target Start/End: Complemental strand, 5856310 - 5856222
Alignment:
Q  394 cgtagaacccgggttcacttggttttgggagtaacttttcgccctttaacataaaaaccgcagatgacatgttaggcctattttctggt 482  Q
    ||||||||||||||||| ||||||| ||||||||| |||| |||||||||||||| ||| |||||||||| |||||||||| |||||||    
T  5856310 cgtagaacccgggttcatttggtttggggagtaacctttcaccctttaacataaagaccacagatgacatattaggcctatcttctggt 5856222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 18427153 - 18427234
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  18427153 tgctagcaacactctctt--gaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaa 18427234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 20791481 - 20791398
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| || |||||||||    
T  20791481 gagtagtgctagcaccactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactt 20791398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 46450250 - 46450168
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| |||||||||| || | |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46450250 gagtagtgctagcaacgctctatttt-aacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactt 46450168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 29388593 - 29388678
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||| ||| | ||| ||||||||||||||||||| || |||||||||||||| ||||||||||||| |||||||||| |||||    
T  29388593 aatgctatcaatattttattttgaacactctctctaacacccactctcttattgacttaaatcattgtgagtctacactttgaaaa 29388678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 43016600 - 43016529
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcatt 209  Q
    |||||||||||||| |||||| | |||||||||| | || ||||||||||||||||||||||||||||||||    
T  43016600 ttgagtaatgctagaaacactctattttgaacacccactgtaatactcactctcttattgatttaaatcatt 43016529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 27243225 - 27243155
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc 216  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||| ||||  |||||||| ||||||||    
T  27243225 tgctagcaacactctcttttgaacactctttctaatactcactctctcattgggttaaatcaatgtgggtc 27243155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 2419468 - 2419540
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    |||||||| | | ||||||||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  2419468 tagcaacattgttttttgaacactttctttaatactcactttcttattggtttaaatcattgtgggtctacac 2419540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 15790370 - 15790434
Alignment:
Q  145 atgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcatt 209  Q
    |||||||||||||| | ||||||| | |||||||||||||||||||||||||| |||||||||||    
T  15790370 atgctagcaacactcttttttgaataatctctctaatactcactctcttattggtttaaatcatt 15790434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 46161117 - 46161049
Alignment:
Q  155 cactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||| ||| ||| |||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  46161117 cactctctcttggacactctctctaatactcactctcttattggtttaaatcattatggatctacactt 46161049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 14236204 - 14236121
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| ||||||||||||| | ||||||||||||| ||||||||||||| | |||||| | ||||| ||||||| |||||||||    
T  14236204 gagtagtgctagcaacactctgttttgaacactctttctaatactcacttttttattggtctaaattattgtggatctacactt 14236121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 39186149 - 39186066
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| ||||| ||||||| ||||||||| |||||||| ||||| | ||||||||||||||||||||||||  | |||||||||    
T  39186149 gagtagtgctatcaacactctcttttgaatactctctccaataccctctctcttattgatttaaatcattgcagatctacactt 39186066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 48351621 - 48351532
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||| | ||| | ||||||||||| | ||||||||||||  |||||||||||||||||||||| ||| | ||||||| |||||    
T  48351621 gagtaatgctaacgacattctcttttgaacattttctctaatactctttctcttattgatttaaatcattatggatatacactttgaaaa 48351532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 5443767 - 5443835
Alignment:
Q  55 aaaaggagattttagatagcaaactattctacaaatggtcaacacatgttcaatttggagtacgcaagt 123  Q
    |||||||||||||| ||| ||||| |||||||||||||||| ||||| |||||||||||| | ||||||    
T  5443767 aaaaggagattttaaataccaaacgattctacaaatggtcagcacattttcaatttggagcaagcaagt 5443835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 8824983 - 8825063
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||| | | ||||||||||||||| |||||||||||||||||||| ||||||| |||||| || || |||| |||||    
T  8824983 tagcaacattctgttttgaacactctctttaatactcactctcttattggtttaaattattgtgagtgtagactttgaaaa 8825063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 27243047 - 27243099
Alignment:
Q  145 atgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  27243047 atgctagcaacactctcttttgaacactctctctaacactcactcttttattg 27243099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 29755672 - 29755596
Alignment:
Q  153 aacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||| |||||||||||||| |||||||||  || ||||||||| ||||||||||||| | ||||||||| |||||    
T  29755672 aacactctcttttgaacactccctctaatacctaccctcttattggtttaaatcattgttgatctacactttgaaaa 29755596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 49418424 - 49418479
Alignment:
Q  150 agcaacactttcttttgaacactctctctaatactcactctcttattgatttaaat 205  Q
    ||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||    
T  49418424 agcaacactctcttttgaacattctctctagtattcactctcttattgatttaaat 49418479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 5856403 - 5856329
Alignment:
Q  277 tcacagtcgcactctatcttgcctctaaaaatgagaatgaagcttcatttcctgaacaccctttagatgaagatc 351  Q
    ||||||| ||| ||||||  |||||||| ||||||| ||||||||||||| |||||||| |||||||| ||||||    
T  5856403 tcacagtggcattctatcgggcctctaacaatgagattgaagcttcatttactgaacactctttagataaagatc 5856329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 138 - 216
Target Start/End: Complemental strand, 44844169 - 44844091
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc 216  Q
    |||||||||| |||||| ||| ||||||  ||||||||||||| ||||||| | ||||||  |||||||||||||||||    
T  44844169 ttgagtaatgatagcaagactctctttttgacactctctctaacactcacttttttattggattaaatcattgtgggtc 44844091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 24429050 - 24429103
Alignment:
Q  170 actctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||||||||||| | |||||| ||||||||||||||| |||||||||    
T  24429050 actctctctaatactcactattttattggtttaaatcattgtggatctacactt 24429103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 742135 - 742058
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| ||||||||| | ||||||||  | ||| ||||||||| |||||||||  |||||||||||||||||||||||||    
T  742135 aatgccagcaacactctgttttgaac--tgtctataatactcattctcttattagtttaaatcattgtgggtctacactt 742058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 752571 - 752494
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| ||||||||| | ||||||||| ||| |  |||||||| |||||||||  |||||||||||||||||||||||||    
T  752571 aatgccagcaacactctgttttgaacagtctat--aatactcattctcttattagtttaaatcattgtgggtctacactt 752494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 55452037 - 55452093
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||||||||||||||||||| | |||| ||||||||||| || ||||||||||    
T  55452037 aacactctctctaatactcactctttcattggtttaaatcattatgagtctacactt 55452093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 38138589 - 38138660
Alignment:
Q  152 caacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||| |||||||| |||| | | ||||||| |||||||||||| ||||||||||||||| |||| ||||    
T  38138589 caacactctcttttgatcactttatttaatacttactctcttattggtttaaatcattgtggatctatactt 38138660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 10948588 - 10948638
Alignment:
Q  173 ctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||| ||||||||||||| |||||| ||||||||||||||||| |||||||    
T  10948588 ctctttaatactcactcttttattggtttaaatcattgtgggtttacactt 10948638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 41387719 - 41387657
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||| |||||||| |||||||||   |||||||||||||||||| ||||| |||||    
T  41387719 aacactctctccaatactcaatctcttatttgattaaatcattgtgggtctgcactttgaaaa 41387657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 52951377 - 52951423
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactct 190  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  52951377 aatgctagcaacactctctttttaacactctctcaaatactcactct 52951423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 38928007 - 38928060
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||| |||||||| |||| ||||||| ||||||||| ||||||    
T  38928007 aatgctagcaacactctcttttgatcactttctctaacactcactcttttattg 38928060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 350
Target Start/End: Original strand, 5500572 - 5500644
Alignment:
Q  278 cacagtcgcactctatcttgcctctaaaaatgagaatgaagcttcatttcctgaacaccctttagatgaagat 350  Q
    |||||| ||| ||||||  |||||||| ||||||| |||||||||| ||  ||||||| ||||||||||||||    
T  5500572 cacagtggcattctatcgggcctctaataatgagattgaagcttcaattattgaacactctttagatgaagat 5500644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 24748913 - 24748961
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||| |||||||| |||||||||||| ||||||||| ||||||    
T  24748913 tagcaacactctcttttgagcactctctctaacactcactcttttattg 24748961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 34918403 - 34918447
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctctt 193  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||||    
T  34918403 tagcaacaatttattttgaacactctctctaatactcagtctctt 34918447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 38414812 - 38414749
Alignment:
Q  160 tcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||| || ||||| ||| |||||||||||||||| ||||||| || |||| |||||||||    
T  38414812 tcttttgagcattctctttaacactcactctcttattggtttaaattatcgtggatctacactt 38414749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 52951537 - 52951486
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||| |||||| |||||||||||||  ||||||||||| ||||    
T  52951537 tgctagcaacactctctttttaacactctctctagcactcactctctcattg 52951486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 28529249 - 28529307
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||| |||||||||||||||  ||||| |||||||||||||  ||||||||| ||||||    
T  28529249 tgaggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattg 28529307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 37600123 - 37600181
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||| ||||||||||||||| |||||||| |||||||||||  || |||||| ||||||    
T  37600123 tgaggaatgctagcaacactctcttttgagcactctctctagcacccactcttttattg 37600181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 5523440 - 5523509
Alignment:
Q  278 cacagtcgcactctatcttgcctctaaaaatgagaatgaagcttcatttcctgaacaccctttagatgaa 347  Q
    |||||| ||| ||||||  |||||||| ||||||| ||||||||| |||  ||||||| |||||||||||    
T  5523440 cacagtggcattctatcgggcctctaacaatgagattgaagcttcgtttattgaacactctttagatgaa 5523509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 10769910 - 10769869
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctcta 179  Q
    ||||| ||||||||||||||| |||||||| |||||||||||    
T  10769910 ttgaggaatgctagcaacactctcttttgagcactctctcta 10769869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 20493624 - 20493579
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactc 189  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||    
T  20493624 aatgctagcaacactcacttttcaacactctctctaacactcactc 20493579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 46575949 - 46576002
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||| ||||||| ||| || ||||||||||| || ||||||||||||||||    
T  46575949 aatgctatcaacactctctcttcaacactctctcaaacactcactctcttattg 46576002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 46576126 - 46576060
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtggg 214  Q
    |||||||||||||  ||||| |||||||||| ||||||||||||||| || |  |||||||| ||||||    
T  46576126 tgctagcaacact--cttttcaacactctctttaatactcactctctaatagggttaaatcaatgtggg 46576060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 138921 - 138877
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgt 211  Q
    ||||| |||| ||||||| ||||| ||||||||||||||||||||    
T  138921 aacaccctctttaatacttactcttttattgatttaaatcattgt 138877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 2009172 - 2009096
Alignment:
Q  147 gctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||| ||||| | |||||| ||||  |||||||||| ||| | | |||||||||||||| |||||| ||||||||||    
T  2009172 gctaacaacattctcttttaaacatcctctctaatattcatttttttattgatttaaattattgtgagtctacactt 2009096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 29775135 - 29775175
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctcta 179  Q
    |||| ||||||||||||||| |||||||| |||||||||||    
T  29775135 tgaggaatgctagcaacactctcttttgagcactctctcta 29775175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 41707435 - 41707517
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||| |||||||||||||| || ||||||||||||||| ||| ||| | | ||||| || ||||||| |||||||||||| ||||    
T  41707435 tgaggaatgctagcaacac-ttattttgaacactctctttaacacttattttctta-tggtttaaattattgtgggtctatactt 41707517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 6e-35; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 8109143 - 8109052
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  8109143 ttgagtaatgctagcaacactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaa 8109052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 754586 - 754658
Alignment:
Q  151 gcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  754586 gcaacactttcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactt 754658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 722330 - 722259
Alignment:
Q  152 caacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  722330 caacactttcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactt 722259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 43771311 - 43771222
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||| || |||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  43771311 gagtaatgctagcaacgctctcttttgaacaccctctttaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaa 43771222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 39471347 - 39471259
Alignment:
Q  135 attttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||| ||||||||||| ||||||| |||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39471347 atttggagtaatgctaacaacactctcttttaaacattctctctaatactcactctcttattggtttaaatcattgtgggtctacactt 39471259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 26361303 - 26361386
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  26361303 gagtaatgctagcaacactctcttttgaacaccctctctaatactcactcacttattggtttaaatcattatgggtctacactt 26361386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 50164580 - 50164491
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||| |||||||||||||| |||||||||| |||||    
T  50164580 gagtaatgctagtaacactatcttttgaacactctctctaatgctcactttcttattggtttaaatcattgtgagtctacactttgaaaa 50164491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 20454725 - 20454634
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||| || |||||||||| | ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  20454725 ttgagcaacgctagcaacattctcttttgaacactctctctaacactcactctgttattgatttaaatcattgtggatctacactttgaaaa 20454634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 24834764 - 24834674
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||| ||||||||||||||| |||||| ||| |||||||||||| |||||||||||||| ||||||| ||||||||||||||||| |||||    
T  24834764 tgaggaatgctagcaacactctcttttaaactctctctctaatagtcactctcttattggtttaaattattgtgggtctacactttgaaaa 24834674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 40991593 - 40991667
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||||||| ||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||    
T  40991593 tagcaacacttttttttgaacactctctctgatactcactcttttattggtttaaatcattgtgggtctacactt 40991667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 47009377 - 47009285
Alignment:
Q  137 tttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||| |||||||||| | |||||||||||| |||||||||||||||| |||||||| ||||||||||||||  ||||||||| |||||    
T  47009377 tttgagtaacgctagcaacattctcttttgaacaccctctctaatactcactttcttattggtttaaatcattgtgtatctacactttgaaaa 47009285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 24938410 - 24938493
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||||||||| | |||||| |||||| ||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  24938410 gagtaatgctagcaacattatcttttcaacactttctctaatacttactctcttattggtttaaatcattgtaggtctacactt 24938493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 38537508 - 38537591
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| ||  |||||||||    
T  38537508 gagtaatgttagcaacactttcttttgaacactctctctaataatcattcttttattgatttaaatcattatgaatctacactt 38537591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 19447317 - 19447241
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc 216  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||    
T  19447317 gagtagtgctagcaacactctcttttgaacactctctttaatactcactctctaattgagttaaatcattgtcggtc 19447241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 45310942 - 45311032
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||| | ||||||||||   |||||||||||| ||||||||||||||||||||||||||  |||| ||||| |||||    
T  45310942 tgagtaatgctagcaacattctcttttgaactgactctctaatacttactctcttattgatttaaatcattgtaagtcttcactttgaaaa 45311032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 11895222 - 11895134
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctct-ctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaa 228  Q
    |||||||||||||||||| ||||||||||||| | | ||| ||||||||||||||||  || |||||||||||||||||||||| ||||    
T  11895222 agtaatgctagcaacactctcttttgaacacttttttctattactcactctcttattcgttcaaatcattgtgggtctacactttgaaa 11895134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 22542568 - 22542492
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtggg 214  Q
    ||||| ||||||| ||||||| ||||||||||||||| | |||||||||||||||||||  ||||||||||||||||    
T  22542568 ttgagcaatgctaacaacactatcttttgaacactctttttaatactcactctcttattagtttaaatcattgtggg 22542492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 221
Target Start/End: Complemental strand, 49242357 - 49242274
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    ||||||||||||| ||||||| |||||| |||||||||| | ||||||| |||||||||| ||||||||||||||  |||||||    
T  49242357 ttgagtaatgctaacaacactctcttttaaacactctctatgatactcattctcttattggtttaaatcattgtgaatctacac 49242274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 31250877 - 31250967
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaa-tactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||||||| | |||| || ||||||||||| || | ||||| ||||||||||||||||||||||||||||| || |||||    
T  31250877 gagtaatgctagcaacactctattttaaatactctctctaaatatttactcttttattgatttaaatcattgtgggtctacattttgaaaa 31250967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 34129394 - 34129484
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||| |||||||| |||| |||||||  ||||||||||||||||| |||||| |||||| ||||||| ||| |||||| |||||    
T  34129394 tgagtaatgctggcaacactctcttctgaacacaatctctaatactcactcttttattggtttaaaccattgtgagtccacactttgaaaa 34129484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 52279254 - 52279343
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||| |||||||| | | |||| |||||||| ||||||| |||||||| ||||||| |||||||||||||||||| |||| |||||    
T  52279254 gagtaatggtagcaacattcttttttaaacactctatctaatattcactctcctattgatctaaatcattgtgggtctaaactttgaaaa 52279343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 43124508 - 43124575
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatc 206  Q
    |||||||||||| |||||||||| |||||||||||| | |||||| ||||||||||||| ||||||||    
T  43124508 tgagtaatgctaacaacactttcctttgaacactctttataatacgcactctcttattggtttaaatc 43124575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 221
Target Start/End: Original strand, 1559906 - 1559990
Alignment:
Q  137 tttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    |||||||| ||||| ||||||||| |||||||||||||| |||||| | | | |||||||| ||||||||||| || ||||||||    
T  1559906 tttgagtagtgctaacaacactttattttgaacactctcactaatattgaatttcttattggtttaaatcattttgagtctacac 1559990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 49077435 - 49077351
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||||| |||||| |||||| |||||  |||  | ||||||  ||||||||| |||||||||||||||||||||||||    
T  49077435 tgagtaatgctagtaacactctcttttaaacaccttcttgagtactcaaactcttattggtttaaatcattgtgggtctacactt 49077351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 33653511 - 33653557
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgg 213  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||    
T  33653511 aacactctctctaatactcactttcttattggtttaaatcattgtgg 33653557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 37451023 - 37451097
Alignment:
Q  155 cactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||| |||||| |||||  ||||||||||||||||| |||||| |||||||||||| | |||||||||| |||||    
T  37451023 cactctcttttaaacaccttctctaatactcactcttttattggtttaaatcattgcgagtctacactttgaaaa 37451097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 25719127 - 25719183
Alignment:
Q  160 tcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc 216  Q
    ||||||||||| | ||||||||||||||||||| ||||  |||||||||||||||||    
T  25719127 tcttttgaacaatttctctaatactcactctctgattgggttaaatcattgtgggtc 25719183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 51904611 - 51904687
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtct 217  Q
    |||| ||||||||||||| |||||| |||||||||||||| ||| ||  ||||||||  ||||||||| ||||||||    
T  51904611 agtattgctagcaacactctcttttcaacactctctctaacacttacattcttattggcttaaatcatggtgggtct 51904687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 19321867 - 19321947
Alignment:
Q  134 tattttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc 216  Q
    |||| |||||| |||||||  |||| ||||||||||  ||||||||||||| |||||||||||| ||| |||||||| |||||    
T  19321867 tattatgagtagtgctagcttcactctcttttgaac--tctctctaatacttactctcttattggtttgaatcattgcgggtc 19321947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 37315559 - 37315610
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactct 190  Q
    |||| ||||||||||||||| |||||||| |||||||||||| |||||||||    
T  37315559 tgagaaatgctagcaacactctcttttgagcactctctctaacactcactct 37315610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 13070120 - 13070059
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatca 207  Q
    ||||||||||||| ||||||||||| | ||||||| ||||||||| ||||||| | ||||||    
T  13070120 tgctagcaacactctcttttgaacattttctctaacactcactcttttattgagtaaaatca 13070059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 27654474 - 27654531
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||  ||||| |||||| |||||||||||||| ||||| ||||||||||    
T  27654474 gagtaatgctagggacactctcttttcaacactctctctaacactcattctcttattg 27654531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 29699650 - 29699585
Alignment:
Q  163 tttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaa 228  Q
    |||| ||||||| ||||||| |||||||||||||| ||||||||||||| || ||| |||| ||||    
T  29699650 tttgtacactctatctaatattcactctcttattgttttaaatcattgtcgggctatactttgaaa 29699585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 52672006 - 52671945
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattg 210  Q
    |||||||| | |||||| |||||||||| ||||||||||| |||||||  ||||||||||||    
T  52672006 tagcaacattatcttttaaacactctctttaatactcactatcttattagtttaaatcattg 52671945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 5545755 - 5545687
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtct 217  Q
    |||||||||| ||||||||||||||||||||||||| ||| | | |||   |||||||| |||||||||    
T  5545755 tagcaacactctcttttgaacactctctctaatacttactttttaatttgcttaaatcaatgtgggtct 5545687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 5994863 - 5994939
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtct 217  Q
    |||| ||||||||||| | |||||| ||||||||||| || | ||||| ||| ||||| ||||||||| ||||||||    
T  5994863 agtagtgctagcaacagtctcttttcaacactctctccaacattcactttctaattgacttaaatcatggtgggtct 5994939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 18421825 - 18421897
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgt 211  Q
    ||||||||| |||||||||| ||||||||| ||| | | ||||| ||||| | |||||| |||||||||||||    
T  18421825 tgagtaatgttagcaacactctcttttgaatactttatttaatattcacttttttattggtttaaatcattgt 18421897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 40812039 - 40812091
Alignment:
Q  145 atgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||||||| | ||||||||||||||||||  ||||||||| ||||||    
T  40812039 atgctagcaacactcttttttgaacactctctctagcactcactcttttattg 40812091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 19933475 - 19933554
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||| |||||||||| | ||||||||||||||| ||||||  ||||  |||||  |||||||||||||  ||||||||||    
T  19933475 aatgttagcaacactctattttgaacactctctttaataccaactcatttattagtttaaatcattgttagtctacactt 19933554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 20225349 - 20225388
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctct 178  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  20225349 tgagtagtgctagcaacactctcttttgaacactctctct 20225388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 35179795 - 35179717
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctac 219  Q
    ||||||||||| ||||||| |||||||| |||| ||| ||||| ||||||| |||||  | ||||||||||| |||||||    
T  35179795 gagtaatgctaacaacactctcttttga-cactatctttaatattcactctattattagtataaatcattgtaggtctac 35179717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 46287627 - 46287537
Alignment:
Q  139 tgagtaatgctagcaacactttcttttg-aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||||||| ||||  |||| | |||| ||||| |||| || ||||| |||||||||||||| ||| |||||| |||||    
T  46287627 tgagtaatgctagcaacacttttttttctaacaatatctc-aatacccactttcgtattggtttaaatcattgtgagtcaacactttgaaaa 46287537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 8108952 - 8109010
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||| |||||||||||||||  ||||| |||||||||||||  ||||||||| ||||||    
T  8108952 tgagaaatgctagcaacactcacttttcaacactctctctagcactcactcttttattg 8109010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 27654662 - 27654596
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatca 207  Q
    |||| ||||||||||||| |||||| ||||||||||| || ||||| | | |||||| |||||||||    
T  27654662 agtagtgctagcaacactctcttttcaacactctctcaaacactcaatttattattggtttaaatca 27654596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 43958327 - 43958268
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatca 207  Q
    ||||| ||| ||| |||||||||||||||||||  |||| |||||||||||| |||||||||    
T  43958327 tgctaacaatactctcttttgaacactctctct--tacttactctcttattggtttaaatca 43958268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 24106830 - 24106773
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||||   ||||| |||||| |||||||||||||| || |||||||||||||    
T  24106830 gagtaatgctaatgacactctcttttcaacactctctctaacacccactctcttattg 24106773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 43771127 - 43771180
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||| ||||||||||  |||||||||||||||||||  ||||||||| ||||||    
T  43771127 aatggtagcaacactcacttttgaacactctctctatgactcactcttttattg 43771180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 45081759 - 45081820
Alignment:
Q  162 ttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||| | ||| ||||||||||||||| |||||| ||||||| |||||| || |||||||    
T  45081759 ttttgaaaattctttctaatactcactcttttattggtttaaattattgtgagtgtacactt 45081820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 47237920 - 47237867
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||| ||||||| ||||||||||||||||||||  | ||||||| ||||||    
T  47237920 aatgctatcaacactctcttttgaacactctctctagcattcactcttttattg 47237867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 50481584 - 50481629
Alignment:
Q  184 tcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||| ||||||| |||||| |||||||||| |||||    
T  50481584 tcactctcttattggtttaaatgattgtgtgtctacactttgaaaa 50481629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 51206221 - 51206172
Alignment:
Q  148 ctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||| |||||||| |||||||||||  ||||||||| ||||||    
T  51206221 ctagcaacactctcttttgagcactctctctagcactcactcttttattg 51206172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 20225383 - 20225419
Alignment:
Q  187 ctctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  20225383 ctctcttattggtttaaatcattgtgagtctacactt 20225419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 20454545 - 20454593
Alignment:
Q  148 ctagcaacactttcttttgaacactctctctaatactcactctcttatt 196  Q
    |||||||||||| ||||| |||||||||||||  ||||||||| |||||    
T  20454545 ctagcaacacttacttttcaacactctctctagcactcactcttttatt 20454593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 30033393 - 30033341
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttatt 196  Q
    |||||||||||   |||||||| |||||| ||||||||||||||||| |||||    
T  30033393 aatgctagcaaatttttcttttaaacactatctctaatactcactcttttatt 30033341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 37050643 - 37050695
Alignment:
Q  160 tcttttgaacactctctctaatactcactctcttattgatttaaatcattgtg 212  Q
    ||||||||| ||||||| ||||||||| | | |||||| ||||||||||||||    
T  37050643 tcttttgaatactctctttaatactcatttttttattggtttaaatcattgtg 37050695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 38636520 - 38636439
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||| ||| ||||||| | |||||| ||||||||  |||| | | | |||||||||| ||||||||||||| |||||||||    
T  38636520 gagtaatactaacaacactcttttttgaccactctct--aatatttattttcttattgatataaatcattgtggatctacactt 38636439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 39016845 - 39016793
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttatt 196  Q
    |||| |||||||||| ||||||||||||||||||||  ||| ||||| |||||    
T  39016845 aatgttagcaacactctcttttgaacactctctctagcacttactcttttatt 39016793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 48339340 - 48339424
Alignment:
Q  145 atgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||   |||||| |||| ||||||| |  |||||| |||||| |||||| |||| ||||||||| ||| |||||    
T  48339340 atgctagcaacactcgtttttgagcactttctctaacatccactcttttattggtttaaagcattatgggtctacgctttgaaaa 48339424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 16983579 - 16983490
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  16983579 gagtaatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaa 16983490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 1977158 - 1977257
Alignment:
Q  130 attctattttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||| || |||||||||||| |||||  |||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||||||||| |||||    
T  1977158 attctaattagagtaatgctagtaacacactcttttgaacacactctctaatactcactcttttattggtttaaatcattgtggatctacactttgaaaa 1977257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 17499230 - 17499317
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||||  |||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  17499230 gagtaatgctagcaacact--cttttgacaactctctctaatactcactctcttattggtttaaatcattgtggatctacactttgaaaa 17499317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 6098771 - 6098861
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||| |||| || ||||||| |||||| |||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  6098771 tgagcaatgataacaacactctcttttaaacattctctctaatactcactctcttattgatttaaattattgtggatctacactttgaaaa 6098861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 24055932 - 24056009
Alignment:
Q  152 caacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  24055932 caacactctcttttgaacactttctctaacactcactctcttattggtttaaataattgtgggtctacactttgaaaa 24056009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 34861190 - 34861261
Alignment:
Q  143 taatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtggg 214  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||| ||||||||    
T  34861190 taatgctagcaacactctcttttgaacaccctccctaatactcactctcttattggtttaaattattgtggg 34861261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 7493357 - 7493426
Alignment:
Q  160 tcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||| |||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  7493357 tcttatgaacactctttctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaa 7493426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 5980057 - 5980007
Alignment:
Q  147 gctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5980057 gctagcaacactctcttttgaacactctctctaatactcactctcttattg 5980007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 8904038 - 8903948
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||| ||| ||||||| |||||||||||   | |||| |||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  8904038 tgagtaatactaacaacactctcttttgaacatcttttctattacttactctcttattggtttaaatcattgtgggtctacactttgaaaa 8903948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 13407322 - 13407408
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc-tacacttagaaaa 229  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||||  |||||||| |||||||| ||||||| |||||    
T  13407322 aatgctagcaacactctcttttgaacactctctctaacactcattctctcattgggttaaatcaatgtgggtcatacactttgaaaa 13407408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 35151728 - 35151807
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||||||| ||||||||||||||| | ||||| ||||| |||||||  ||| ||| |||||||||||||||||    
T  35151728 aatgctagcaacactctcttttgaacactctatttaatattcactttcttattagtttgaattattgtgggtctacactt 35151807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 13214681 - 13214591
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||| ||||||||| | | |||||||||||||| ||||||||| ||||||||||  |||| |  ||||||||||||||||| |||||    
T  13214681 tgagtaatactagcaacattctattttgaacactctccctaatactcgctctcttattagtttataatattgtgggtctacactttgaaaa 13214591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 9952753 - 9952841
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||| | |||||||||| ||||| |||||||||||  |||||||| | |||||||| ||||||||||||||||| ||||||| |||||    
T  9952753 gagtaacgttagcaacactctcttt-gaacactctcttaaatactcattatcttattggtttaaatcattgtgggtttacactttgaaaa 9952841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 28413865 - 28413953
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||  ||| |||||||||||||| | |||||||||| ||| |||||| ||||||||||| |||||||| |||| |||||    
T  28413865 gagtaatgctagcagtactctcttttgaacactcgc-ctaatactcattcttttattggtttaaatcattatgggtctatactttgaaaa 28413953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 36804846 - 36804907
Alignment:
Q  152 caacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgg 213  Q
    ||||||| |||||| |||| ||||||||||||| |||||||||||||||||||| |||||||    
T  36804846 caacactctcttttcaacattctctctaatacttactctcttattgatttaaattattgtgg 36804907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 5095754 - 5095826
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgt 211  Q
    |||| |||||||| ||||||  ||||| ||||  ||||||||||||||||||||||||| |||||||||||||    
T  5095754 tgagcaatgctaggaacactcacttttaaacatcctctctaatactcactctcttattggtttaaatcattgt 5095826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 32072255 - 32072199
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||||||| | || |||||||||||||||||| |||||||||||||||||    
T  32072255 aacactctctctaatgcccattctcttattgatttaaataattgtgggtctacactt 32072199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 43506687 - 43506639
Alignment:
Q  173 ctctctaatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  43506687 ctctctaatactcactctcttattggcttaaatcattgtgggtctacac 43506639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 8914929 - 8914867
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||   || ||||||||||||| ||||||||||||||||||||||||| |||||    
T  8914929 aacactctctctgtcacccactctcttattggtttaaatcattgtgggtctacactttgaaaa 8914867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 41727588 - 41727534
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| || ||||||||    
T  41727588 aacactctctctaatactcactctcttgttggtttaaatcattatgagtctacac 41727534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 1961443 - 1961402
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaat 181  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  1961443 gagtaatgctagcaacactctcttttgaacactctctctaat 1961402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 34952629 - 34952548
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctaca 220  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||| | | |  | ||| |||||||||||| |||||||||    
T  34952629 tgagtaatgttagcaacactattttttgaacactctctctaatacttatttttctcttggtttaaatcattgcgggtctaca 34952548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 45246613 - 45246536
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| ||||||| ||||||||| ||||||||  |||| | ||||||||||||||||||||||||  | |||||||||    
T  45246613 tgctatcaacactctcttttgaatactctctcctataccccctctcttattgatttaaatcattgcagatctacactt 45246536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 5727418 - 5727346
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgt 211  Q
    ||||||||| || | |||||||||||| ||||| ||||||| |||||||| | |||||| |||||||||||||    
T  5727418 tgagtaatgttaacgacactttcttttaaacaccctctctagtactcacttttttattggtttaaatcattgt 5727346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 14236496 - 14236440
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||| | ||||||||    
T  14236496 aacactctctctaatactcactctcttgttggtttaaattattgtgcgcctacactt 14236440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 11574215 - 11574160
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctctta 194  Q
    ||||||||| ||| |||||| ||||||||||||||||| ||| |||||||||||||    
T  11574215 tgagtaatgttaggaacactctcttttgaacactctctttaacactcactctctta 11574160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 23685312 - 23685233
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||| |    ||||||| |||||||||||| |  |||||||||    
T  23685312 gagtagtgctagcaccactctcttttgaacactctctctaatactaa----cttattggtttaaatcattgcgaatctacactt 23685233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 4675079 - 4675002
Alignment:
Q  152 caacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||| | ||||||||||||| ||||||| ||| | | |||||| |||||||||||||| | |||||||| |||||    
T  4675079 caacactctattttgaacactctttctaatattcatttttttattggtttaaatcattgtgtgactacactttgaaaa 4675002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 5732740 - 5732692
Alignment:
Q  135 attttgagtaatgctagcaacactttcttttgaacactctctctaatac 183  Q
    |||||||||||||||||||| ||| |||||||||||  |||||||||||    
T  5732740 attttgagtaatgctagcaatactctcttttgaacatcctctctaatac 5732692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 17915986 - 17915926
Alignment:
Q  151 gcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgt 211  Q
    |||||||| | |||| |||||||||||||||||||||| | |||||  |||||||||||||    
T  17915986 gcaacactcttttttaaacactctctctaatactcactttattattagtttaaatcattgt 17915926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 8671129 - 8671086
Alignment:
Q  145 atgctagcaacactttcttttgaacactctctctaatactcact 188  Q
    |||||||||||| | |||||||||| ||||||||||||||||||    
T  8671129 atgctagcaacattctcttttgaacgctctctctaatactcact 8671086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 39023564 - 39023508
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||||||||||||| | |||| ||||  |||||||||||||| ||||||||||    
T  39023564 tgagtaatgctagcaacactatttttttaaca--ctctctaatactcattctcttattg 39023508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 216
Target Start/End: Complemental strand, 6387741 - 6387671
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc 216  Q
    ||||||||||| |  |||||| ||||||||||||| ||||| ||||||||||  ||||| || ||||||||    
T  6387741 tgctagcaacaatcccttttggacactctctctaacactcattctcttattgggttaaaacaatgtgggtc 6387671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 31691690 - 31691636
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattga 198  Q
    |||||||||||||||  |||||||| ||||||| ||| ||||||||| |||||||    
T  31691690 aatgctagcaacactcacttttgaaaactctctttaacactcactcttttattga 31691636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 9193567 - 9193478
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||||||| ||||||| ||||  ||  |||||| || | | |||||| ||| ||| ||||| ||||||||||| |||||    
T  9193567 gagtaatgctagcaacactctcttttgtacacgatcattaatacacatttttttattggttttaattattgtaggtctacactttgaaaa 9193478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 11962681 - 11962765
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||   |||||||||||||||   |||||||| || | |||||| ||||||||||| ||| ||||||||| |||||    
T  11962681 aatgctagcaacatcctcttttgaacactcttgttaatactcgcttttttattggtttaaatcatt-tggatctacactttgaaaa 11962765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 35797551 - 35797497
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||  ||||||||||||  ||||||||||||||||||||| | |||||||    
T  35797551 aacactctctacaatactcactct--tattgatttaaatcattgtggatttacactt 35797497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 38091532 - 38091468
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcat 208  Q
    ||||||||||||| | |||||| ||||||||||| || ||||||| ||| ||||  |||||||||    
T  38091532 aatgctagcaacattctcttttcaacactctctccaacactcactttctaattggcttaaatcat 38091468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 34905521 - 34905432
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  34905521 gagtgatgctagcaacactctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaa 34905432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 1392812 - 1392738
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtggg 214  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||||||||||| ||||||||||||||||    
T  1392812 gagtaatgctagcaacactctcttttgaacaccctatctaatactcactctcttattggtttaaatcattgtggg 1392738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 16851968 - 16852057
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||| |||||||||||| |||||||||||  ||| ||||||| ||||||||||||| ||||||||||||||||||||||||| |||||    
T  16851968 gagtaaggctagcaacactctcttttgaacatcctccctaatacccactctcttattggtttaaatcattgtgggtctacactttgaaaa 16852057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 32112725 - 32112801
Alignment:
Q  153 aacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||||| |||||    
T  32112725 aacactctcttttgaacattctctctaatattcactctcttattgttttaaatcattgtggatctacactttgaaaa 32112801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 21987477 - 21987394
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| |||||||| |||  ||||||||||||||||||||||||||||| |||||||| |||||||||||| || |||||||||    
T  21987477 gagtagtgctagcaccaccctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactt 21987394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 5106480 - 5106394
Alignment:
Q  143 taatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||| ||||||  |||||||||||| |||||||||| ||||||| |||||| |||||||| |||||||| ||||||| |||||    
T  5106480 taatgctaacaacaccctcttttgaacacactctctaatattcactctattattggtttaaatccttgtgggtgtacactttgaaaa 5106394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 10133152 - 10133242
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||| | || ||||||| ||||||||| |||| || ||||||||||||| |||||| ||||||||||||||| ||||||||| |||||    
T  10133152 tgagtaaggttatcaacactctcttttgaatactcactttaatactcactcttttattggtttaaatcattgtggttctacactttgaaaa 10133242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 16187429 - 16187516
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||| |||||||||| |||||| ||||||||  ||||||||||||| ||||||| ||||||| ||||| ||||||||||| |||||    
T  16187429 gagtaatgttagcaacactctcttttcaacactct--ctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaa 16187516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 31116146 - 31116200
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  31116146 aacactctctctaatactcactctcttattggtttaaatcattgtgggtttacac 31116200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 221
Target Start/End: Original strand, 12753752 - 12753836
Alignment:
Q  137 tttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    |||||| ||| ||||||||||| |||||| ||||||||||||||||||| |||| |||||  |||||||||||||| || |||||    
T  12753752 tttgaggaatactagcaacactctcttttcaacactctctctaatactcgctcttttattagtttaaatcattgtgagtgtacac 12753836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 229
Target Start/End: Original strand, 12780758 - 12780843
Alignment:
Q  142 gtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||| |||  ||||||||||| |||||||||| ||| || ||||||| ||||||||||||||| ||||||||| |||||    
T  12780758 gtaatgctagcaatact--cttttgaacaccctctctaatattcattcccttattggtttaaatcattgtggatctacactttgaaaa 12780843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 32598942 - 32599026
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||| |||| |||||||| | |||||| |||| ||||| ||||||||||||| |||||||||||||||||||||  |||||||||    
T  32598942 tgagaaatgttagcaacattctcttttaaacattctctttaatactcactcttttattgatttaaatcattgtgaatctacactt 32599026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 16187650 - 16187734
Alignment:
Q  143 taatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||| |||||||||| |||||| ||||||||  ||||||||||||| ||||||| ||||||| ||||| ||||||||||| |||||    
T  16187650 taatgttagcaacactctcttttcaacactct--ctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaa 16187734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 8441857 - 8441933
Alignment:
Q  153 aacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||| | ||||||||||||||||||||||||||||| |||||| |||| || ||||  ||||||||||| |||||    
T  8441857 aacactattttttgaacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaa 8441933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 8450661 - 8450737
Alignment:
Q  153 aacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||| | ||||||||||||||||||||||||||||| |||||| |||| || ||||  ||||||||||| |||||    
T  8450661 aacactattttttgaacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaa 8450737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 445976 - 445914
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||  |||| |||| |||||    
T  445976 aacactctctctaatactcattctcttattggtttaaatcattgtgactctagactttgaaaa 445914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 2676053 - 2675991
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||||||| | |||||| |||||| ||||||||||||||| || |||||    
T  2676053 aacactctctctaatactcacttttttattggtttaaaccattgtgggtctacattttgaaaa 2675991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 12784934 - 12785023
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||| | | ||||||||| || || |||||||  || |||||||||| ||||||||||| ||| ||||||||| |||||    
T  12784934 gagtaatgctagcaatattgtcttttgaataccctttctaatatccattctcttattggtttaaatcattatggatctacactttgaaaa 12785023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 17144669 - 17144755
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||| |||||||  ||||| | |||||||| ||||||| ||||  |||||  ||||||||||||||||||||||||| |||||    
T  17144669 agtaatgctaacaacact--cttttaaccactctctttaatacttactcctttattagtttaaatcattgtgggtctacactttgaaaa 17144755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 16436249 - 16436166
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||| |||||||||| |||||| |||||||| | ||||| ||| ||  |||||| |||||||| || |||||||||||||    
T  16436249 gagtaatgttagcaacactctcttttaaacactctttttaatattcagtcgattattggtttaaatctttttgggtctacactt 16436166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 19090208 - 19090266
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||| ||||||||||||||| |||||||| |||||||||||  ||||||||| ||||||    
T  19090208 tgaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattg 19090266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 19737433 - 19737486
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||| ||||||||||| ||||||||  ||||||||| ||||||    
T  19737433 aatgctagcaacactctcttttgaacattctctctatcactcactcttttattg 19737486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 900087 - 900040
Alignment:
Q  137 tttgagtaatgctagcaacactttcttttgaacactctctctaatact 184  Q
    |||||||||| |||| |||||| |||| ||||||||||||||||||||    
T  900087 tttgagtaatactagaaacactctcttctgaacactctctctaatact 900040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 34231871 - 34231918
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctcttatt 196  Q
    |||||||||| |||||||||||||||||||||| |||| | |||||||    
T  34231871 tagcaacactatcttttgaacactctctctaatgctcattttcttatt 34231918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 35128900 - 35128849
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||| ||||||    
T  35128900 tgctagcaacactctcttttgaacactctctctagcagtcactcttttattg 35128849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 173
Target Start/End: Original strand, 16257463 - 16257497
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactc 173  Q
    |||||||||||||||||||||| ||||||||||||    
T  16257463 tgagtaatgctagcaacactttattttgaacactc 16257497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 32122953 - 32122891
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||| |||||| || ||||| | ||||||  |||||||||||||||||||||||| |||||    
T  32122953 aacactatctctattattcacttttttattggcttaaatcattgtgggtctacactttgaaaa 32122891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 34905337 - 34905390
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||||||||   |||| |||||||||||||| ||||||||| ||||||    
T  34905337 aatgctagcaacactcatttttcaacactctctctaacactcactcttttattg 34905390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 10060860 - 10060912
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttatt 196  Q
    ||||||||||||||| ||||||||||||||| | ||| | ||||||| |||||    
T  10060860 aatgctagcaacactctcttttgaacactctttataacaatcactcttttatt 10060912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 10061036 - 10060988
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||| |||||||| |||||||||||| ||||||| | ||||||    
T  10061036 tagcaacactctcttttgagcactctctctaacactcacttttttattg 10060988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 19305833 - 19305789
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactct 190  Q
    ||||||||||||| |||||| |||||| |||||||| ||||||||    
T  19305833 tgctagcaacactctcttttaaacactatctctaatcctcactct 19305789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 32439486 - 32439530
Alignment:
Q  153 aacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||| |||||  |||||||||||||| ||||||||||||||||    
T  32439486 aacactctctttcaaacactctctctaacactcactctcttattg 32439530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 12989370 - 12989293
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12989370 tgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactt 12989293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 26767756 - 26767845
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||| || |||||    
T  26767756 gagtaatgctagcaacactttcttttgaacactctatctaatactcactcttttattggtttaaatcattgtgagtctacaatttgaaaa 26767845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 38464342 - 38464259
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  38464342 tgctagcaatactctcttttgaacactctctctaatacttactctcttattggtttaaatcattgtgggtctacactttgaaaa 38464259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 45554741 - 45554655
Alignment:
Q  143 taatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||| || ||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  45554741 taatgataacaacactctcttttgaacattctctctaatactcactttcttattggtttaaatcattgtgggtctacacttggaaaa 45554655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 6980115 - 6980204
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||  || ||||||||||||||||| |||| |||||    
T  6980115 gagtaatgcttgcaacactctcttttgaacactttctctaatactcactctcttattagttgaaatcattgtgggtctatactttgaaaa 6980204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 35316397 - 35316476
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctaca 220  Q
    ||||||||||| |||||| |||||||| |||||| | | |||||||||||||||||||||||||||||||||||||||||    
T  35316397 agtaatgctagtaacactctcttttgagcactctttatgatactcactctcttattgatttaaatcattgtgggtctaca 35316476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 9470265 - 9470177
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||| |||||||||||||| |||| |||| || |||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||    
T  9470265 gagtgatgctagcaacactctcttctgaa-accctctctaatattcactctcttattggtttaaatcattgtgggtctacactttgaaaa 9470177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 10981695 - 10981622
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    ||||||||||||| |||   |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  10981695 tgctagcaacactctcta--gaacactccctctaatactcactctcttattggtttaaatcattgtgggtctacac 10981622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 472157 - 472231
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgg 213  Q
    ||||||||| ||| |||| |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||    
T  472157 tgagtaatgttagaaacaatttcttttgagcactctctttaatactcgctctcttattggtttaaatcattgtgg 472231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 19639279 - 19639189
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||| ||||| ||||||||||| |  |||| ||||| |||||||||||||| ||||||||||||| ||||| ||||| |||||    
T  19639279 tgagtaatgctaacaacattttcttttgaatagcctctataatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaa 19639189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 19837872 - 19837782
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||| ||||| ||||||||||| |  |||| ||||| |||||||||||||| ||||||||||||| ||||| ||||| |||||    
T  19837872 tgagtaatgctaacaacattttcttttgaatagcctctataatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaa 19837782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 4552843 - 4552916
Alignment:
Q  148 ctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    |||||||||||  |||||||||| | | ||| |||||||||||||||||| |||||||||||||||||||||||    
T  4552843 ctagcaacactcacttttgaacattttttctgatactcactctcttattggtttaaatcattgtgggtctacac 4552916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 44274415 - 44274331
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaa 228  Q
    ||||||| ||||||| |||||| || | ||||||||| ||||||||| |||||| ||||||||||||||| ||||||||| ||||    
T  44274415 aatgctaacaacactctcttttaaatattctctctaacactcactctgttattggtttaaatcattgtggatctacactttgaaa 44274331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 32856134 - 32856219
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||| |||||||||| | |||||||||| || ||||||||||| |||||||||| ||||||||| | ||| ||||||||| |||||    
T  32856134 aatgttagcaacactctattttgaacaccctttctaatactcaatctcttattggtttaaatcactatggatctacactttgaaaa 32856219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 36471833 - 36471922
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||| |||   |||| || ||||||||||||||||||||| |||||| |||||||||||||| || |||| || |||||    
T  36471833 gagtaatgctagcaaaactccttttttaagactctctctaatactcactcttttattggtttaaatcattgtgagtttacattttgaaaa 36471922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 42579649 - 42579718
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatca 207  Q
    ||||||| ||| |||||||||||||||| |||||||| ||||| ||||||||||| ||||| ||||||||    
T  42579649 ttgagtagtgccagcaacactttcttttaaacactctttctaaaactcactctctaattgacttaaatca 42579718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 11539612 - 11539521
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatc-attgtgggtctacacttagaaaa 229  Q
    |||||| | |||| |||| | ||||||  |||||||||||||||||||||||||||||| |||||||| ||| ||| ||||||||| |||||    
T  11539612 tgagtagtactaggaacattctcttttacacactctctctaatactcactctcttattggtttaaatcaattctggatctacactttgaaaa 11539521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 25238278 - 25238361
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||| ||||||| |||||| |||||| ||||||  ||||||| | |||||| ||||||||||||||| ||||||||| |||||    
T  25238278 tgctaacaacactctcttttaaacactttctctagcactcacttttttattggtttaaatcattgtggatctacactttgaaaa 25238361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 14489539 - 14489617
Alignment:
Q  145 atgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||||| ||| ||||||||| | | ||||||||||||| ||| |||||| ||||||| ||||||| |||||||||    
T  14489539 atgctagcaagactctcttttgaaaattttctctaatactcattcttttattggtttaaattattgtggatctacactt 14489617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 19193496 - 19193574
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtct 217  Q
    |||| ||||||||||||||| |||||| ||||||||||| || ||||||| ||| |||  |||||||||| ||||||||    
T  19193496 tgaggaatgctagcaacactctcttttcaacactctctccaacactcactttctaattagtttaaatcatggtgggtct 19193574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 15508909 - 15508978
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatca 207  Q
    ||||| |||| |||||||||| ||||||||||||||| ||||| ||||||||| ||||||| | ||||||    
T  15508909 ttgaggaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatca 15508978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 30718350 - 30718411
Alignment:
Q  168 acactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||| ||||| | |||||| |||||||||||||| |||||||||| |||||    
T  30718350 acactctctctaatattcacttttttattggtttaaatcattgtgagtctacactttgaaaa 30718411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 2122972 - 2122912
Alignment:
Q  148 ctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcat 208  Q
    ||||||||||| | ||||||||| | |||||  ||||||||||||||||||||||||||||    
T  2122972 ctagcaacactcttttttgaacattttctctggtactcactctcttattgatttaaatcat 2122912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 27494480 - 27494524
Alignment:
Q  174 tctctaatactcactctcttattgatttaaatcattgtgggtcta 218  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  27494480 tctctaatactcactcttttattgatttaaatcattgcgggtcta 27494524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 6420456 - 6420526
Alignment:
Q  147 gctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtct 217  Q
    |||||||||||| |||||| ||||||||||| |  ||||||| ||||||||  ||||||||| ||||||||    
T  6420456 gctagcaacactctcttttcaacactctctccaccactcactttcttattggcttaaatcatggtgggtct 6420526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 15884615 - 15884525
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||  | || || |||||||| |||  ||||||||||||| | |||||||| ||||||| |||||||||||||| || |||||    
T  15884615 tgagtaatgctgacgacgctctcttttgaccacaatctctaatactcattatcttattggtttaaataattgtgggtctacattttgaaaa 15884525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 34142141 - 34142223
Alignment:
Q  147 gctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||| ||||| ||| | | ||| ||||| |||||||||||||| |||||| |||||||  ||||||||| |||||    
T  34142141 gctagcaacactctctttagaatattttctttaatattcactctcttattggtttaaaccattgtgactctacactttgaaaa 34142223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 37228494 - 37228552
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||| ||||||||||||||| |||||||| |||||||||||  ||||||||| ||||||    
T  37228494 tgagaaatgctagcaacactctcttttgagcactctctctagcactcactcttttattg 37228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 19953581 - 19953504
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtct 217  Q
    ||||||||||||||||||| |||||| |||| | |||| |||||||||| | ||||||  ||||||||| ||| ||||    
T  19953581 gagtaatgctagcaacactctctttttaacattttctccaatactcacttttttattggattaaatcatagtgagtct 19953504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 42182890 - 42182943
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||| |||||||| |||||||||||  ||||||||| ||||||    
T  42182890 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattg 42182943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 17461054 - 17460974
Alignment:
Q  137 tttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtct 217  Q
    |||||||| |||||  |||| | | |||| || ||||||||||||| ||||||||||||| |||||||| |||||| ||||    
T  17461054 tttgagtagtgctaataacattcttttttaaatactctctctaatattcactctcttattaatttaaattattgtgtgtct 17460974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 1110199 - 1110262
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatca 207  Q
    ||||||||||||||| ||||| || || ||||||||| ||||||||| ||||||| | ||||||    
T  1110199 aatgctagcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatca 1110262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 7919311 - 7919354
Alignment:
Q  186 actctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||| ||||||||||||||| ||||||||| |||||    
T  7919311 actctcttattggtttaaatcattgtggatctacactttgaaaa 7919354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 12098863 - 12098951
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatca-ttgtgggtctacacttagaaaa 229  Q
    ||||||||||||||||| | | ||| ||||||||| |  ||||||||||||||||||  ||||||||| ||||| || ||||||| |||||    
T  12098863 gagtaatgctagcaacattctatttggaacactcttt--aatactcactctcttattagtttaaatcatttgtgagtttacactttgaaaa 12098951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 24497376 - 24497288
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||| ||||| ||||||| ||| || ||||||||||  ||||||||||||| ||||  ||||||||| | | ||||||||||| |||||    
T  24497376 tgagtagtgctaacaacactctctcttaaacactctct--aatactcactctcctattagtttaaatcactcttggtctacactttgaaaa 24497288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 43414538 - 43414462
Alignment:
Q  141 agtaatgctagcaacactttctttt-gaacactctctctaatactcactctcttattgatttaaatcattgtgggtcta 218  Q
    |||||||||| ||||||| |||||| |||||||| ||  ||||||||| ||||| ||| ||||||||||||||| ||||    
T  43414538 agtaatgctatcaacactctctttttgaacactcact--aatactcaccctcttcttggtttaaatcattgtggatcta 43414462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 28898221 - 28898163
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||| ||||||||||||||| | |||||| |||||||||||  ||||||||| ||||||    
T  28898221 tgaggaatgctagcaacactcttttttgagcactctctctagcactcactcttttattg 28898163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 31494205 - 31494260
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||| ||||||||||||| |||||| ||||  |||||||| ||||||||||||||||    
T  31494205 gagtagtgctagcaacactctcttttcaaca--ctctctaacactcactctcttattg 31494260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 41546211 - 41546153
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||| |||||||||| |||| |||||| ||||||||||| || | ||||||||||||||    
T  41546211 tgaggaatgctagcatcactctcttttcaacactctctcaaacattcactctcttattg 41546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 43400125 - 43400187
Alignment:
Q  135 attttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||||   | ||| |||||| |||||||||||||| ||||||| ||||||||    
T  43400125 attttgagtaatgctatggatactctcttttcaacactctctctaacactcactttcttattg 43400187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 4964671 - 4964724
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||| ||| ||||||||| ||||||||||  ||||||||| ||||||    
T  4964671 aatgctagcaatactctcttttgaatactctctctagcactcactcttttattg 4964724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 20459089 - 20459032
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||| ||||||||||||| |||||| ||||||||||| |  ||||||| ||||||||    
T  20459089 gagtagtgctagcaacactctcttttcaacactctctccaccactcactttcttattg 20459032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 27968919 - 27968972
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||| ||||||||  ||||||||||  ||||||||| ||||||    
T  27968919 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattg 27968972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 28091668 - 28091615
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||| ||||||||  ||||||||||  ||||||||| ||||||    
T  28091668 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattg 28091615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 28101900 - 28101847
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||| ||||||||  ||||||||||  ||||||||| ||||||    
T  28101900 aatgctagcaacactctcttttgagtactctctctagcactcactcttttattg 28101847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 30706455 - 30706390
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaat 205  Q
    ||||| ||||||||||||| |||||| ||||||||||| || ||||||| | || ||| |||||||    
T  30706455 gagtagtgctagcaacactctcttttcaacactctctcaaacactcactttattgttggtttaaat 30706390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 45554568 - 45554621
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||||||||  ||||| |||||||||||||  ||||||||| ||||||    
T  45554568 aatgctagcaacactcacttttcaacactctctctagcactcactcttttattg 45554621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 30849412 - 30849349
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgg 213  Q
    |||||||||| | ||||||  ||||| | |||||| |||| ||||||||||||||||||||||||    
T  30849412 tagcaacactcttttttgat-actctttttaatacgcactttcttattgatttaaatcattgtgg 30849349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 38104433 - 38104358
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc 216  Q
    ||||| |||||||||| || ||||||  || |||||||||| ||||||||||| ||||| |||| ||| ||||||||    
T  38104433 gagtagtgctagcaaccctctcttttagac-ctctctctaacactcactctctcattgaattaattcaatgtgggtc 38104358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 44152415 - 44152340
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtct 217  Q
    |||||||||||||||||| | | || |||| ||||||||| ||||||| | |||||| |||||||||  ||||||||    
T  44152415 agtaatgctagcaacactctttgttcaacattctctctaacactcact-ttttattggtttaaatcaaggtgggtct 44152340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 9e-31; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 27949454 - 27949370
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaa 228  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  27949454 aatgctagcaacactctcttttgaacactctctctaatactcactctcttattagtttaaatcattgtgggtctacactttgaaa 27949370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 6442350 - 6442261
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||| |||||||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  6442350 gagtaatgttagcaacactttcttttgaacactatctttaatactcactcttttattggtttaaatcattgtgggtctacactttgaaaa 6442261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 27888463 - 27888384
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  27888463 aatgctagcaacactctcttttgagcactctctctaacactcactctcttattggtttaaatcattgtgggtctacactt 27888384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 46517480 - 46517387
Alignment:
Q  136 ttttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||| |||||||||||||||||| |||||||||||  |||||||||||||| |||||||||| |||||||||||||| |||||||||| |||||    
T  46517480 tttttagtaatgctagcaacactctcttttgaacagcctctctaatactcattctcttattggtttaaatcattgtgagtctacactttgaaaa 46517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 11824255 - 11824167
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||| ||||||| |||||||||||||||||  |||||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  11824255 tgagtaatgctaacaacactctcttttgaacactctct--aatactcactttcttattgatttaaatcattgtgggtttacactttgaaaa 11824167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 22190125 - 22190035
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||||||||  |||||| |||||||||||| |||||||||||| |||||    
T  22190125 tgagtaatgctaacaacactctcttttgaacaccctctctaatactcactcgtttattggtttaaatcattgcgggtctacactttgaaaa 22190035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 25686831 - 25686919
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||| |||||||||| ||||||||||| ||| ||||||||||| | |||||||| ||||||||||||||||||||||||| |||||    
T  25686831 agtaatgttagcaacactctcttttgaacattctttctaatactcattatcttattggtttaaatcattgtgggtctacactttgaaaa 25686919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 6580002 - 6580073
Alignment:
Q  145 atgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc 216  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  6580002 atgctaccaacactctcttttgaacactctctctaatactcactctcttattggtttaaattattgtgggtc 6580073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 48374434 - 48374517
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| |||||| || |||||||    
T  48374434 gagtagtgctagcaacactctcttttgaacactctctctaatactcactctcttgttggtttaaattattgtgagtatacactt 48374517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 39254264 - 39254188
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctaca 220  Q
    ||||||| ||||| | ||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  39254264 aatgctaacaacattctcttttgaacactctctttaacactcactctcttattgatttaaattattgtgggtctaca 39254188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 12263458 - 12263520
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  12263458 aacactctctctaatactcactatcttattggtttaaatcattgtgggtctacactttgaaaa 12263520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 32212865 - 32212939
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtggg 214  Q
    |||||| |||||||||||| |||||||||||| || | |||||||||||||||||||| ||||||||||||||||    
T  32212865 gagtaacgctagcaacactctcttttgaacaccctatataatactcactctcttattggtttaaatcattgtggg 32212939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 44350800 - 44350886
Alignment:
Q  143 taatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||| ||||||| ||||||||||||  ||||||||||||||||| || ||| |||||||||||||| |||||||||| |||||    
T  44350800 taatgctaacaacactctcttttgaacaccatctctaatactcactcttttgttggtttaaatcattgtgagtctacactttgaaaa 44350886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 14795314 - 14795233
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||  ||||||||||| ||| | |||||||    
T  14795314 gagtaatgctagcaacact--cttttgaacactctctcttatactcactctcttattagtttaaatcattatggatatacactt 14795233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 15242306 - 15242225
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||  ||||||||||| ||| | |||||||    
T  15242306 gagtaatgctagcaacact--cttttgaacactctctcttatactcactctcttattagtttaaatcattatggatatacactt 15242225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 11692361 - 11692275
Alignment:
Q  143 taatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||||||| ||||  ||||||||| |||| || ||||||| |||||    
T  11692361 taatactagcaacactctcttttgaacacactctctaatactcactctcatattagtttaaatcactgtgagtttacactttgaaaa 11692275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 7459527 - 7459450
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtcta 218  Q
    ||||||||||||||||||||  |||||| ||||||| ||||||||||||| |||||| ||||||| ||||||| ||||    
T  7459527 agtaatgctagcaacacttttatttgaatactctctttaatactcactcttttattggtttaaattattgtggatcta 7459450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 36845481 - 36845566
Alignment:
Q  135 attttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctaca 220  Q
    ||||||| ||||  |||||||||| | ||||||| |||||||  |||| |||||||||||||| ||||||||||||||||||||||    
T  36845481 attttgaataatattagcaacactctattttgaatactctctagaatattcactctcttattggtttaaatcattgtgggtctaca 36845566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 17749880 - 17749804
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc 216  Q
    ||||| ||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||  |||||||| ||||||||    
T  17749880 gagtagtgctagcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtc 17749804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 229
Target Start/End: Original strand, 19422850 - 19422918
Alignment:
Q  161 cttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||| ||||| ||||||||||| |||||| ||||||||||||||| ||||||||| |||||    
T  19422850 cttttgaacactatctctgatactcactcttttattggtttaaatcattgtggatctacacttcgaaaa 19422918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 24539117 - 24539193
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc 216  Q
    ||||| ||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||  |||||||| ||||||||    
T  24539117 gagtagtgctagcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtc 24539193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 32205250 - 32205190
Alignment:
Q  151 gcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgt 211  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||||    
T  32205250 gcaacactttcttttgaacatcctctctaatactcactctcttattagtttaaatcattgt 32205190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 7775011 - 7774956
Alignment:
Q  158 tttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgg 213  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||||||||||||    
T  7775011 tttcttttgaacactctctctaatatttactctcttattggtttaaatcattgtgg 7774956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 27320539 - 27320476
Alignment:
Q  160 tcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||| |||||||||| |||||||| ||||||| |||||||| |||||||||||||||||    
T  27320539 tcttttgaatactctctctactactcactttcttattcatttaaataattgtgggtctacactt 27320476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 30742544 - 30742615
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctaca 220  Q
    |||||||||| | |||||||||||| |||||||| ||| | |||||||||||||||||||||| ||||||||    
T  30742544 tagcaacactctattttgaacactcactctaatattcattttcttattgatttaaatcattgtaggtctaca 30742615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 31628187 - 31628101
Alignment:
Q  137 tttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||| ||||||| | |||||| |||||||||||| ||| ||||||| |||||||||||| |||||||||| || |||| ||||||    
T  31628187 tttgaggaatgctaacgacacttgcttttgaacactatctttaatacttactctcttattggtttaaatcatcgtaggtcaacactt 31628101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 32178823 - 32178888
Alignment:
Q  164 ttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||| || ||||||| |||||    
T  32178823 ttgaacaatctctctgataatcactctcttattgatttaaatcattgtgtgtatacactttgaaaa 32178888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 33008276 - 33008208
Alignment:
Q  150 agcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    ||||||||| |||||||||||||||   |||||||| |||| |||||| |||||||||||||||||||||||    
T  33008276 agcaacactctcttttgaacactct---taatactctctcttttattggtttaaatcattgtgggtctacac 33008208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 7775183 - 7775115
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcatt 209  Q
    |||||||||| ||||| | ||||||||||||||||||||||| |||||| ||||||  |||||||||||    
T  7775183 agtaatgctaacaacattctcttttgaacactctctctaatattcactcacttatttgtttaaatcatt 7775115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 31874174 - 31874118
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||| ||||||||||||||||| | |||||||||||||| ||||||||||    
T  31874174 aacactctctcgaatactcactctcttataggtttaaatcattgtgagtctacactt 31874118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 12167365 - 12167315
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtct 217  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||||||||    
T  12167365 aacactctctttaatactcactttcttattggtttaaatcattgtgggtct 12167315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 38065328 - 38065398
Alignment:
Q  147 gctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtct 217  Q
    |||||||||||| ||| || ||||||||||| |||||||||| |||||||| |||||||||  ||||||||    
T  38065328 gctagcaacactctctcttcaacactctctcaaatactcactttcttattggtttaaatcaaggtgggtct 38065398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 2911947 - 2911874
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgg 213  Q
    |||||||| ||| ||||||||||||| ||||||||||| |||||||||| | ||||||  ||||||||| ||||    
T  2911947 gagtaatgttagtaacactttcttttcaacactctctccaatactcacttttttattggcttaaatcatggtgg 2911874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 45909636 - 45909585
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||||| ||||||    
T  45909636 tgctagcaacactctcttttgaatactctctctaacactcactcttttattg 45909585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 24539302 - 24539249
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||| ||||| ||||||| ||||||||||||| ||||||||| ||||||    
T  24539302 aatgctagcgacactctcttttggacactctctctaacactcactcttttattg 24539249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 33008099 - 33008172
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgt 211  Q
    ||||| |||||||||||||||  |||||||||||| ||||||  ||||||||| ||||||  | ||||||||||    
T  33008099 ttgaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgt 33008172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 31502504 - 31502548
Alignment:
Q  185 cactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||| |||||||||||||| |||||||||| |||||    
T  31502504 cactctcttattggtttaaatcattgtgagtctacactttgaaaa 31502548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 10933980 - 10934035
Alignment:
Q  160 tcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggt 215  Q
    |||||||||| |||| | ||||||||| |||||||||  |||||||||||||||||    
T  10933980 tcttttgaacgctctttttaatactcaatctcttattagtttaaatcattgtgggt 10934035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 20954859 - 20954788
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtct 217  Q
    ||||||||||||| |||||| ||||||||||| || ||||||| | ||||||  ||||||||| ||| ||||    
T  20954859 tgctagcaacactctcttttcaacactctctcaaacactcacttttttattggcttaaatcatggtgagtct 20954788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 1316440 - 1316387
Alignment:
Q  157 ctttcttttgaacactctctctaatactcactctcttattgatttaaatcattgt 211  Q
    ||||||||| |||| | ||||||||||||||||| |||||| |||||||||||||    
T  1316440 ctttctttt-aacattttctctaatactcactcttttattggtttaaatcattgt 1316387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 17354715 - 17354653
Alignment:
Q  135 attttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||| ||| ||||||||||||||| | |||||| |||||||||||| ||||| ||| ||||||    
T  17354715 atttagaggaatgctagcaacactcttttttgagcactctctctaacactcattcttttattg 17354653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 19840878 - 19840936
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||| ||||||||||||||| | |||||| |||||||||||  ||||||||| ||||||    
T  19840878 tgaggaatgctagcaacactctattttgagcactctctctagcactcactcttttattg 19840936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 13919775 - 13919816
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctcta 179  Q
    ||||| ||||||||||||||| |||||||| |||||||||||    
T  13919775 ttgagaaatgctagcaacactctcttttgagcactctctcta 13919816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 13919962 - 13919917
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactc 189  Q
    ||||||||||||||| |||||||| |||||||||||  ||||||||    
T  13919962 aatgctagcaacactctcttttgagcactctctctagcactcactc 13919917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 17749695 - 17749748
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||| ||||| | ||||| ||||||||||||| ||||||||| ||||||    
T  17749695 aatgctagcgacactcttttttggacactctctctaacactcactcttttattg 17749748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 25428658 - 25428605
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||| |||||||| |||||| | || |||||||||| ||||||    
T  25428658 aatgctagcaacactctcttttgagcactctttttagtactcactcttttattg 25428605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 26190077 - 26190032
Alignment:
Q  152 caacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||| ||||||||||||| ||||||| ||||||||| ||||||    
T  26190077 caacactctcttttgaacactttctctaacactcactcttttattg 26190032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 26703438 - 26703491
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||| |||| ||| |||||||||||  ||||||||| ||||||    
T  26703438 aatgctagcaacactctcttctgagcactctctctagcactcactcttttattg 26703491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 27888283 - 27888336
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||||||||  ||||||| |||||||||||| |||||| |||| ||||    
T  27888283 aatgctagcaacactcacttttgagcactctctctaacactcaccctctcattg 27888336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 31502643 - 31502590
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||||||||  ||||| |||| ||||||||| ||||||||| ||||||    
T  31502643 aatgctagcaacactcacttttcaacagtctctctaacactcactcttttattg 31502590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 31759943 - 31759865
Alignment:
Q  143 taatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||||||||||  |||||| ||||||||||  |||||||| | ||||||||  ||||||||||| | ||||| ||||    
T  31759943 taatgctagcaacaccctcttttaaacactctct--aatactcattttcttattggcttaaatcattgcgagtctatactt 31759865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 10619575 - 10619535
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctcta 179  Q
    |||| ||||||||||||||| |||||||| |||||||||||    
T  10619575 tgaggaatgctagcaacactctcttttgatcactctctcta 10619535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 22786152 - 22786196
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcact 188  Q
    ||||||||||||||| |||||||| |||||||||||  |||||||    
T  22786152 aatgctagcaacactctcttttgagcactctctctagcactcact 22786196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 42863613 - 42863569
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcact 188  Q
    |||||||||||||||  ||||| |||||||||||||| |||||||    
T  42863613 aatgctagcaacactcacttttaaacactctctctaacactcact 42863569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 27998 - 27914
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||| ||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  27998 tgagtagtgctagcaacaccctcttttgaacactctctttaatactcactctcttattggtttaaatcattgtgggtctacactt 27914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 8899200 - 8899110
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||| |||||||  |||||||| |||||    
T  8899200 tgagtaatgctagcaacaatctcttttgaacactctctctaatactcactctcttattggtttaaattattgtggacctacactttgaaaa 8899110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 10659763 - 10659852
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||||||| |||||||||||||| |||||    
T  10659763 tgagtaatgctagcaacattttcttttgaacactttctctaatac-cactctcttattggtttaaatcatcgtgggtctacactttgaaaa 10659852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 11987812 - 11987722
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||||| |||||| |||||||| |||||||  |||||||||| || ||||||||||||||||||||||||| |||||    
T  11987812 tgagtaatgctagcaacactctcttttaaacactctttctaatatccactctcttaatggtttaaatcattgtgggtctacactttgaaaa 11987722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 41948145 - 41948230
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||| | | ||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||| |||||    
T  41948145 aatgctagcaatattctcttttgaacactctctctaacactcactctcttattgatttaaatcattgtggatttacactttgaaaa 41948230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 26980262 - 26980330
Alignment:
Q  145 atgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgg 213  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26980262 atgctagcaacactctcttttcaacactctctataatactcactctcttattgatttaaatcattgtgg 26980330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 16948528 - 16948603
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctac 219  Q
    ||||||||||||||| ||| ||||||| | |||||||||||||||||||||||||||||||||||||||| |||||    
T  16948528 aatgctagcaacactctctgttgaacattttctctaatactcactctcttattgatttaaatcattgtggatctac 16948603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 30678910 - 30678995
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||| | |||||| |||||||||||| ||||||||||||||||  ||||||||||||| |||||||||| |||||    
T  30678910 aatgctagcaacactcttttttgagcactctctctaacactcactctcttattggcttaaatcattgtgagtctacactttgaaaa 30678995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 39974195 - 39974266
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgt 211  Q
    ||||||||||| ||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  39974195 gagtaatgctaacaacactctcttttgaacattctttctaatactcactctcttattggtttaaatcattgt 39974266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 33193212 - 33193146
Alignment:
Q  163 tttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  33193212 tttgaacactttctctaatactcattctcttattggtttaaatcattgtgggtctacactttgaaaa 33193146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 19101596 - 19101685
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||| ||||||||  ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||  | ||||||||| |||||    
T  19101596 gagtagtgctagcactactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcagatctacactttgaaaa 19101685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 28218041 - 28218132
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctc--tctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||||||| |||||||||||||| |  ||||||||||||| ||||||| |||||||| | ||||| ||||||||| |||||    
T  28218041 gagtaatgctagcaacactctcttttgaacactcccgctctaatactcactatcttattaatttaaattactgtggttctacactttgaaaa 28218132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 25543511 - 25543452
Alignment:
Q  153 aacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtg 212  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  25543511 aacactctcttttgaacactctctctaatactcactatcttattggtttaaatcattgtg 25543452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 6133623 - 6133708
Alignment:
Q  143 taatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||| |||||||||| |||||||||||  ||||||||||||||||||||||||| ||| ||||||||||||| || |||| |||||    
T  6133623 taatgttagcaacactctcttttgaacatcctctctaatactcactctcttattggttt-aatcattgtgggtgtagactttgaaaa 6133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 37552966 - 37553033
Alignment:
Q  160 tcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  37552966 tcttttgaacactcttt--aatactcactctcttattgatttaaatcattgtggatctacactttgaaaa 37553033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 41958241 - 41958179
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  41958241 aacactctttctaatactcactctcttattggtttaaatcactgtgggtctacactttgaaaa 41958179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 8741226 - 8741307
Alignment:
Q  148 ctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||||||  |||||||||||||| || || |||| |||||    
T  8741226 ctagcaacactctcttttgaacaatttctctaatactcactctcttattagtttaaatcattgtgtgtttatactttgaaaa 8741307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 21466615 - 21466680
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaat 205  Q
    ||||| |||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  21466615 gagtagtgctagcaccactctcttttgaacactctctctaatattcactttcttattgatttaaat 21466680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 32211788 - 32211860
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    |||||||||| |||||| |||||| ||| ||||  |||||||||||||| |||||||||||||||||||||||    
T  32211788 tagcaacactctcttttcaacactttctttaatgatcactctcttattggtttaaatcattgtgggtctacac 32211860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 12767329 - 12767406
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||| | | ||||||||| || |||||||||||||||||| |||||| ||||||||||| || ||||||||||    
T  12767329 tgctagcaaaaatctcttttgaaaaccctctctaatactcactcttttattggtttaaatcattatgagtctacactt 12767406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 139 - 223
Target Start/End: Complemental strand, 2225410 - 2225326
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||| ||||| |||||| |||||||||||| || | | ||||||||| |||||||| ||||||||| ||| |||||||||||    
T  2225410 tgagtaaggctagtaacactctcttttgaacacgctttgtgatactcactttcttattggtttaaatcactgtcggtctacactt 2225326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 39019752 - 39019700
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctct 192  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  39019752 gagtagtgctagcaacactctcttttgaacactttctctaatactcactctct 39019700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 51732456 - 51732373
Alignment:
Q  145 atgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||| ||||||||  | ||||||||||||||||| |||||| ||||||| ||||||||| || |||| |||||    
T  51732456 atgctagcaacacttt-ttttgaacgttttctctaatactcactcttttattggtttaaattattgtgggtttatactttgaaaa 51732373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 13114664 - 13114739
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggt 215  Q
    ||||| ||||||||||||| ||||||| ||||||||||||| ||||||| ||| ||||  |||||||| |||||||    
T  13114664 gagtagtgctagcaacactctcttttggacactctctctaacactcactatctcattgggttaaatcaatgtgggt 13114739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 15928739 - 15928659
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    |||||| ||||| ||||||| |||||||||||||||||  |||||||||||| |||||| ||||||||| |||  ||||||||    
T  15928739 tgagtagtgctaccaacactctcttttgaacactctct--aatactcactcttttattggtttaaatcactgtaagtctacac 15928659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 27570406 - 27570327
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||||| | ||||||||||||||||||| | | ||||| |||||||  || |||||||||||||| |||||||    
T  27570406 aatgctagcaacattctcttttgaacactctctctcaaattcactttcttattagttcaaatcattgtgggtttacactt 27570327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 15468385 - 15468323
Alignment:
Q  160 tcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacact 222  Q
    ||||||||||||| |||| |||||| ||||| ||||| |||||||| ||||||||||||||||    
T  15468385 tcttttgaacactatctcaaatacttactcttttattaatttaaattattgtgggtctacact 15468323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 35337018 - 35336956
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||||  |||||||||| |||||||||||||| ||||||| | ||||||    
T  35337018 aacactctctctaatactcgttctcttattggtttaaatcattgtgtgtctacattaagaaaa 35336956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 931555 - 931484
Alignment:
Q  144 aatgctagcaacact-ttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggt 215  Q
    ||||||||||||||| ||||||| |||||| | ||||||| ||||||| |||||| |||||||||||||||||    
T  931555 aatgctagcaacactcttctttt-aacactttttctaatattcactcttttattggtttaaatcattgtgggt 931484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 32848767 - 32848695
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgt 211  Q
    |||| ||||||| ||||||| ||||||||||||||||||||  ||||||||| ||||||  | ||||||||||    
T  32848767 tgaggaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgt 32848695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 33059896 - 33059971
Alignment:
Q  148 ctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||| ||| ||||||||||||| | |||| ||| ||||||||||||| |||||| ||||||| || |||||||    
T  33059896 ctagcaatactctcttttgaacactttttctagtacccactctcttattggtttaaaacattgtgagtgtacactt 33059971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 13889325 - 13889287
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaata 182  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  13889325 aatgctagcaacactctcttttgaacactctctctaata 13889287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 15523391 - 15523312
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| ||||||||  ||| ||||||||||||||||||||||||| |    ||||||| |||||||||||| || |||||||||    
T  15523391 gagtagtgctagcactactctcttttgaacactctctctaatactaa----cttattggtttaaatcattgcggatctacactt 15523312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 15531385 - 15531306
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| ||||||||  ||| ||||||||||||||||||||||||| |    ||||||| |||||||||||| || |||||||||    
T  15531385 gagtagtgctagcactactctcttttgaacactctctctaatactaa----cttattggtttaaatcattgcggatctacactt 15531306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 22540549 - 22540470
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| |||||||| |||| ||||||||||||||||| ||||||| |    ||||||| |||||||||||| || |||||||||    
T  22540549 gagtagtgctagcaccactctcttttgaacactctctttaatactaa----cttattggtttaaatcattgcggatctacactt 22540470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 28274782 - 28274840
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||| ||||  ||||| |||||| |||||||||||||| ||||||||||||||||    
T  28274782 tgagtaatactagggacactctcttttcaacactctctctaacactcactctcttattg 28274840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 29673633 - 29673571
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||||||| | |||||| ||||||| ||||| | ||||||||| |||||    
T  29673633 aacactctctctaatactcacttttttattggtttaaataattgtagttctacactttgaaaa 29673571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 44272076 - 44272014
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||| ||||||||||| | | |||||||||||||||||||| | ||||||||| |||||    
T  44272076 aacactctttctaatactcatttttttattgatttaaatcattgttgttctacactttgaaaa 44272014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 47644331 - 47644373
Alignment:
Q  179 aatactcactctcttattgatttaaatcattgtgggtctacac 221  Q
    ||||||| ||||||||||||||||||||||||||||| |||||    
T  47644331 aatactcgctctcttattgatttaaatcattgtgggtttacac 47644373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 11430622 - 11430569
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||| |||||||| |||||||||||  ||||||||| ||||||    
T  11430622 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattg 11430569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 13388335 - 13388388
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||||| | ||||||    
T  13388335 aatgctagcaacactctcttttgaatactctctctaacactcacttttttattg 13388388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 26980441 - 26980388
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||| ||||||    
T  26980441 aatgctaacaacactcacttttcaacactctctctaatactcactctattattg 26980388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 13114849 - 13114797
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttatt 196  Q
    ||||||||| ||||| ||||||| ||||||||||||| ||||||||| |||||    
T  13114849 aatgctagcgacactctcttttggacactctctctaacactcactcttttatt 13114797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 45179270 - 45179330
Alignment:
Q  169 cactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||| | ||||||| |||||| | ||||||||| ||||||| |||||    
T  45179270 cactctctctaatactcattttcttattaatttaagttattgtgggtttacactttgaaaa 45179330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 28942000 - 28941918
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||| | |||| |||||||| ||||| | |||||||||||||||||||| | | ||||| || | ||||||||||    
T  28942000 tgctagcaacactct-ttttaaacactctatctaacattcactctcttattgatttaagtaaatgtggatccatacttagaaaa 28941918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 46806777 - 46806729
Alignment:
Q  160 tcttttgaacactctctctaatactcactctcttattgatttaaatcattg 210  Q
    |||||||||||||||||  |||| ||||||||||||| |||||||||||||    
T  46806777 tcttttgaacactctct--aatattcactctcttattaatttaaatcattg 46806729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 931375 - 931429
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattga 198  Q
    |||||||||||||||  ||||| ||| || ||||||||||||||||| |||||||    
T  931375 aatgctagcaacactcacttttcaactctatctctaatactcactcttttattga 931429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 11135735 - 11135793
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||| ||||||||||||||| |||||||| |||||||||||  ||||||| | ||||||    
T  11135735 tgaggaatgctagcaacactctcttttgagcactctctctagcactcactattttattg 11135793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 15661063 - 15661005
Alignment:
Q  154 acactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtg 212  Q
    ||||| ||||||| ||||||||||||| ||||||||| ||||||  |||||||| ||||    
T  15661063 acactctcttttggacactctctctaacactcactctattattgggttaaatcaatgtg 15661005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 36567077 - 36567019
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttatt 196  Q
    ||||||||||||   || ||| |||||||||||| |||||||||||||||||| |||||    
T  36567077 ttgagtaatgctcagaagactctcttttgaacacactctctaatactcactctattatt 36567019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 44739119 - 44739165
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactct 190  Q
    |||| |||||||||| ||||||||||||||||||||  |||||||||    
T  44739119 aatgttagcaacactctcttttgaacactctctctagcactcactct 44739165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 33114152 - 33114067
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||| | |  ||||| |||||||||| ||  ||||||| | |||||| ||||||||||| ||| ||||||||| |||||    
T  33114152 aatgctagcaagattcacttttaaacactctctataggactcacttttttattggtttaaatcattctggatctacactttgaaaa 33114067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 41095788 - 41095743
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactc 189  Q
    ||||||||||||||| |||||||| |||||||||||  ||||||||    
T  41095788 aatgctagcaacactctcttttgagcactctctctagcactcactc 41095743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 41917996 - 41918049
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||| |||||||| ||| |||||||  ||||||||| ||||||    
T  41917996 aatgctagcaacactctcttttgagcaccctctctagcactcactcttttattg 41918049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 50773109 - 50773162
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||| ||| ||||||||||||||||||||  ||||| ||| ||||||    
T  50773109 aatgctagcaatactctcttttgaacactctctctagcactcattcttttattg 50773162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 5291607 - 5291671
Alignment:
Q  134 tattttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattga 198  Q
    ||||||||| | ||||| |||||||||||||| |||||||| |  || ||||||||| |||||||    
T  5291607 tattttgaggagtgctaccaacactttctttttaacactcttttcaacactcactcttttattga 5291671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 11135920 - 11135868
Alignment:
Q  145 atgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||||||| ||||||||  ||||||||||  ||||||||| ||||||    
T  11135920 atgctagcaacactctcttttgaggactctctctagcactcactcttttattg 11135868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 21977184 - 21977240
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttatt 196  Q
    ||||||||||||  ||| | |||||| |||||||||||||| ||||||| |||||||    
T  21977184 gagtaatgctagggacattctcttttcaacactctctctaaaactcactttcttatt 21977240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 25543341 - 25543393
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttatt 196  Q
    |||||||||||||||  ||||| |||||||||||||| ||| ||||| |||||    
T  25543341 aatgctagcaacactcacttttaaacactctctctaacacttactcttttatt 25543393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 41095607 - 41095651
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcact 188  Q
    ||||||||||||||| |||||||| |||||||||||  |||||||    
T  41095607 aatgctagcaacactctcttttgagcactctctctagcactcact 41095651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 50424860 - 50424936
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc 216  Q
    ||||| ||||||||||||| ||||||   |||||||||||| | ||||| | ||||||  |||||||| ||||||||    
T  50424860 gagtagtgctagcaacactctcttttaggcactctctctaacattcacttttttattgggttaaatcaatgtgggtc 50424936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 50539565 - 50539525
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatact 184  Q
    ||||||||||||||| | ||||||||| |||||||||||||    
T  50539565 aatgctagcaacactcttttttgaacattctctctaatact 50539525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 28490727 - 28490800
Alignment:
Q  150 agcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  28490727 agcaacactctcttttgaacactctctctaatactcactctcttattggtttaaattattgtgggtctacactt 28490800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 34368541 - 34368456
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||| |||||||| ||||||||||   || ||||||||||||| ||||||||||||||||||||||||| |||||    
T  34368541 aatgctagcaacactctcttttgagcactctctctgtcacccactctcttattggtttaaatcattgtgggtctacactttgaaaa 34368456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 41105565 - 41105654
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||||| | ||||| |||||    
T  41105565 gagtaatgcgagcaacactctcttttgagcactctctctaatactcgctctcttattggtttaaatcactgtgggtatgcactttgaaaa 41105654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 28611777 - 28611856
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||||||| |||||||| |||||||||||| ||  ||||| ||||||||||||||||||||| ||||||||||    
T  28611777 aatgctagcaacactctcttttgagcactctctctaacaccaactcttttattgatttaaatcattgtgcgtctacactt 28611856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 30325870 - 30325952
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| || |||||||||    
T  30325870 gagtagtgctagca-cactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactt 30325952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 10141998 - 10142060
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  10141998 aacactctctctaacactcactctcttattgatttaaataattgttggtctacactttgaaaa 10142060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 12076057 - 12076133
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtc 216  Q
    ||||| ||||||||||||| ||||||||||||| | ||||||||||||||||| ||||  |||||||| ||||||||    
T  12076057 gagtagtgctagcaacactctcttttgaacactttatctaatactcactctctaattggcttaaatcaatgtgggtc 12076133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 37455537 - 37455445
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaaca----ctctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||||||| |||||||||||    | ||||||||||||||||||||||||| ||| ||| |||||| |||||||||| |||||    
T  37455537 gagtaatgctagcaacactctcttttgaacaccctccctctctaatactcactctcttattggttt-aattattgtgagtctacactttgaaaa 37455445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 43405551 - 43405495
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  43405551 aacactccctctgatattcactctcttattgatttaaatcattgtgggtctacactt 43405495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 5413730 - 5413815
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctc---taatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||| ||||||||| |||||||||||||||||    ||||||||||| | |||||| ||||||||||| |||||||||||||    
T  5413730 agtaatgcaagcaacactctcttttgaacactctctactataatactcacttttttattggtttaaatcattatgggtctacactt 5413815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 41330390 - 41330477
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||||||||||  ||||||||||| |||| |||||||   | |||||||| |||||||||||||| |||||||||| |||||    
T  41330390 gagtaatgctagcaacact--cttttgaacacactctttaatactacatttcttattggtttaaatcattgtgagtctacactttgaaaa 41330477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 28223791 - 28223860
Alignment:
Q  160 tcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||||  |||||||||||||||||| |||||| ||||||||||| |||||||| |||| |||||    
T  28223791 tcttttgaacatcctctctaatactcactcttttattggtttaaatcattatgggtctatactttgaaaa 28223860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 32401302 - 32401253
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctctaatactcactct 190  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  32401302 agtagtgctagcaacaccttcttttgaacactctctctaatactcactct 32401253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 28434817 - 28434902
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||||| | |||||| |||    ||||||||||||| | |||||||| |||||||||||||||||||| |||| |||||    
T  28434817 gagtaatgctagcaacattctcttttaaac----tctctaatactcattttcttattggtttaaatcattgtgggtctaaactttgaaaa 28434902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 36337882 - 36337968
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatac---tcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||   |   | | |||||| |||||||||||||||||||||||||    
T  36337882 gagtaatgctatcaacactatcttttgaacactctctctaatacacttattttttttattggtttaaatcattgtgggtctacactt 36337968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 17434849 - 17434927
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||| |||||||||| |||||| |||| ||||||||||  ||||||| |||||| ||||||||| |||||||||||||||    
T  17434849 aatgttagcaacactctcttttaaaca-tctctctaatgttcactcttttattggtttaaatcaatgtgggtctacactt 17434927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 25710494 - 25710556
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||||||||| ||||| ||| |||||||||| ||||||| ||||||||||||||||| |||||    
T  25710494 aacactctctttaatattcattctcttattggtttaaattattgtgggtctacactttgaaaa 25710556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 4959279 - 4959332
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||| ||||||    
T  4959279 aatgctagcaacactctcttttgagcactctctctaatacccactcttttattg 4959332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 5465656 - 5465725
Alignment:
Q  149 tagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtcta 218  Q
    |||||||||| ||  ||||||||| | ||||||| |||||||||||||| ||||||||||| ||||||||    
T  5465656 tagcaacactctccattgaacactttttctaatattcactctcttattggtttaaatcattatgggtcta 5465725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 34384687 - 34384764
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtcta 218  Q
    ||||||| ||| | |||| ||||||||||||||||| ||||||||||||| |||| | | |||||||||||| |||||    
T  34384687 agtaatggtagtagcactctcttttgaacactctctttaatactcactcttttatcggtctaaatcattgtgagtcta 34384764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 14553665 - 14553614
Alignment:
Q  172 tctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    |||||||||||||||||||||| ||| ||||| | |||||||||||||||||    
T  14553665 tctctctaatactcactctcttgttggtttaatttattgtgggtctacactt 14553614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 223
Target Start/End: Original strand, 27592447 - 27592530
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacactt 223  Q
    ||||| ||||| ||||||| ||||||||| ||||||||   ||| ||||||||||||| ||||||||||||  | |||||||||    
T  27592447 gagtagtgctatcaacactctcttttgaatactctctcctgtacccactctcttattggtttaaatcattgcagatctacactt 27592530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 17537124 - 17537186
Alignment:
Q  167 aacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    |||| ||||||| ||| |||||||||||||| ||||||||||| ||| ||||||||| |||||    
T  17537124 aacaatctctcttatattcactctcttattggtttaaatcattatggatctacactttgaaaa 17537186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 42224776 - 42224718
Alignment:
Q  138 ttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttatt 196  Q
    ||||| ||||||||||||||| |||||||| |||||||||||  ||||||||| |||||    
T  42224776 ttgaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttatt 42224718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 4714934 - 4714845
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||    |||| |||||| | ||||||||||||  |||||| || |||||    
T  4714934 gagtagtgctagcaacactctcttttgaacattctctctaatatgttctcttttattggtataaatcattgtgtatctacattttgaaaa 4714845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 40971637 - 40971569
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatca 207  Q
    |||| ||||||| ||||||| |||||||| |||||||||||  ||||||||| ||||||| | ||||||    
T  40971637 tgaggaatgctaacaacactctcttttgagcactctctctagcactcactcttttattgagtgaaatca 40971569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 1923547 - 1923618
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgt 211  Q
    |||||||| || ||||||| | |||||||||   ||||||||||||| | |||||||| |||||||||||||    
T  1923547 gagtaatggtaacaacactcttttttgaacatcatctctaatactcattatcttattggtttaaatcattgt 1923618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 25002014 - 25002077
Alignment:
Q  154 acactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtct 217  Q
    ||||| |||||| ||||||||||| || ||||||| ||| |||| |||||||||| ||||||||    
T  25002014 acactctcttttcaacactctctccaacactcactttctaattggtttaaatcatagtgggtct 25002077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 39246750 - 39246703
Alignment:
Q  183 ctcactctcttattgatttaaatcattgtgggtctacacttagaaaac 230  Q
    ||||||||||||||| ||||||  ||||||||||||||||| ||||||    
T  39246750 ctcactctcttattggtttaaagtattgtgggtctacactttgaaaac 39246703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 186
Target Start/End: Complemental strand, 40926231 - 40926184
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactca 186  Q
    |||| ||||||| |||||||||||||||| |||||||||||| |||||    
T  40926231 tgagaaatgctaacaacactttcttttgagcactctctctaacactca 40926184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 40971453 - 40971504
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||| | ||||||    
T  40971453 tgctagcaacactctcttttgaacactctatctaacactcactattttattg 40971504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 26072290 - 26072232
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||| ||||||||||||||| |||||||| || ||||||||  ||||||||| ||||||    
T  26072290 tgaggaatgctagcaacactctcttttgagcattctctctagcactcactcttttattg 26072232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 34368361 - 34368407
Alignment:
Q  144 aatgctagcaacactttcttttgaacactctctctaatactcactct 190  Q
    ||||||||||||||||  ||||||||||| ||||||| |||||||||    
T  34368361 aatgctagcaacacttatttttgaacactttctctaacactcactct 34368407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 2935494 - 2935449
Alignment:
Q  160 tcttttgaacactctctctaatactcactctcttattgatttaaat 205  Q
    ||||||||||| | ||||||||||||||||| |||||| |||||||    
T  2935494 tcttttgaacaatttctctaatactcactcttttattggtttaaat 2935449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 25919376 - 25919307
Alignment:
Q  160 tcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||| ||| ||| ||||| ||| | | |||||| |||||||||||||| |||||||||| |||||    
T  25919376 tcttttgaatactttctttaatattcatttttttattggtttaaatcattgtgagtctacactttgaaaa 25919307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 2201589 - 2201657
Alignment:
Q  146 tgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtggg 214  Q
    |||||| |||||| |||||| |||||||||| ||  || |||||||||||||  | |||||||||||||    
T  2201589 tgctaggaacactctcttttcaacactctctttagcacccactctcttattgggtaaaatcattgtggg 2201657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 176
Target Start/End: Complemental strand, 10300088 - 10300052
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctct 176  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  10300088 gagtaatgctagcaacactctcttttcaacactctct 10300052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 20159437 - 20159389
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcact 188  Q
    ||||| ||||||||||||| ||| || ||||||||||| ||||||||||    
T  20159437 gagtagtgctagcaacactatctcttcaacactctctcaaatactcact 20159389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 41511808 - 41511772
Alignment:
Q  173 ctctctaatactcactctcttattgatttaaatcatt 209  Q
    |||||||||||| | ||||||||||||||||||||||    
T  41511808 ctctctaatacttaatctcttattgatttaaatcatt 41511772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 296833 - 296890
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    ||||||||||||  |||||||||||| |||||||||||||| ||||||||||||||||    
T  296833 gagtaatgctagggacactttcttttcaacactctctctaacactcactctcttattg 296890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 297027 - 296957
Alignment:
Q  135 attttgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaat 205  Q
    |||||||||| ||||||||||||| |||||| ||||||||||| || |||||||   |||||| |||||||    
T  297027 attttgagtagtgctagcaacactctcttttcaacactctctcaaacactcacttcattattggtttaaat 296957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 8406 - 8494
Alignment:
Q  140 gagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaa 228  Q
    |||||| |||| ||||||| ||||||||| ||||||| ||||||| | ||| |||||| ||||||||||| || |||||||||| ||||    
T  8406 gagtaaggctaacaacactctcttttgaatactctctttaatactaattcttttattggtttaaatcattatgagtctacacttcgaaa 8494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 204704 - 204783
Alignment:
Q  141 agtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctaca 220  Q
    |||||||||||||||||| | ||||||||| |||||||| |||||||||| |||||| |||| || |||||  |||||||    
T  204704 agtaatgctagcaacactcttttttgaacattctctctagtactcactcttttattggtttatataattgtaagtctaca 204783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 121195 - 121252
Alignment:
Q  139 tgagtaatgctagcaacactttcttttgaacactctctctaatactcactctcttattg 197  Q
    |||||||||||||||||| | ||||| ||| | ||||||||||||||||||||||||||    
T  121195 tgagtaatgctagcaacattctcttt-gaaaaatctctctaatactcactctcttattg 121252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 26862 - 26946
Alignment:
Q  145 atgctagcaacactttcttttgaacactctctctaatactcactctcttattgatttaaatcattgtgggtctacacttagaaaa 229  Q
    ||||||||||||||   |||||| |||| ||||||| |  |||||| |||||| |||||| |||| ||||||||| ||| |||||    
T  26862 atgctagcaacactcgtttttgagcactttctctaacatccactcttttattggtttaaagcattatgggtctacgctttgaaaa 26946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University