View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12819_low_9 (Length: 295)
Name: NF12819_low_9
Description: NF12819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12819_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 37810805 - 37810522
Alignment:
| Q |
1 |
caattaatgtcactttcacatgcactgaatggaagaactgatagagaaagtaccctgactcactcactctatactctctaggtgttggtagctctttctt |
100 |
Q |
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| T |
37810805 |
caattaatgtcactttcacatgcactgaatggaagaactgatagagaaagtacactgactcactcactctatactctctaggtgttggtagctctttctt |
37810706 |
T |
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| Q |
101 |
cattccactattgacaaaatttgtcagtatgaattaatccattaagttgataagaattttacattttgaggttacagaattacttttcaactaatcccac |
200 |
Q |
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|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37810705 |
cattccactattgacaaaatttttcagtatgaattaatgcattaagttgataagaattttacattttgaggttacagaattacttttcaactaatcccac |
37810606 |
T |
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| Q |
201 |
caatttcattaatatcttttaaatagcaaagatgattttattgaaaagaagaaattagtattagctatgagatataggctctgt |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
37810605 |
caatttcattaatatcttttaaatagcaaagatgattttattgaaaagaagaaattagtattagctatgagatttaggctctgt |
37810522 |
T |
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