View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1281_high_31 (Length: 339)
Name: NF1281_high_31
Description: NF1281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1281_high_31 |
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Alignment Details
Target: chr4 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 29 - 334
Target Start/End: Original strand, 22651076 - 22651381
Alignment:
| Q |
29 |
aataaaatcttgtgataccaatctcttttattattggttgatcaagaatgtaatctatgattaagctggtcttgttgggatttttcaggccctaacctct |
128 |
Q |
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| T |
22651076 |
aataaaatcttgtgataccaatctcttttattattggttgatcaagaatgtaatctatgattaagctggtcttgttgggatttttcaggccctaacctct |
22651175 |
T |
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| Q |
129 |
ttctggttagctagtgtttttatttagtcataactggaggaggtagggtctgttataatctttgttgtctttgtaatatttatgttcggtttggtttgaa |
228 |
Q |
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| T |
22651176 |
ttctggttagctagtgtttttatttagtcataactggaggaggtagggtctgttataatctttgttgtctttgtaatatttatgttcggtttggtttgaa |
22651275 |
T |
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| Q |
229 |
ttactatatgcaaattctgtattaatttgtcctgtcaattctcttattactttgtgcgttctaggttaaagaagtgctacaattatttatgccaattttg |
328 |
Q |
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| T |
22651276 |
ttactatatgcaaattctgtattaatttgtcctgtcaattctcttattactttgtgcgttctaggttaaagaagtgctacaattatttatgccaatttgg |
22651375 |
T |
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| Q |
329 |
ttggag |
334 |
Q |
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|||||| |
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| T |
22651376 |
ttggag |
22651381 |
T |
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