View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1281_high_49 (Length: 251)
Name: NF1281_high_49
Description: NF1281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1281_high_49 |
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Alignment Details
Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 38571366 - 38571286
Alignment:
| Q |
137 |
gtcacttaaagataccctaatatttcatattaagatactatactaacctcttcagcagtgattatagcttttatgtgctgc |
217 |
Q |
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| T |
38571366 |
gtcacttaaagataccctaatatttcatattaagatactatactaacctcttcagcagtgattatagcttttatgtgctgc |
38571286 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 38571472 - 38571435
Alignment:
| Q |
17 |
acatcatcatccattgggtctctaaccaatacctataa |
54 |
Q |
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| T |
38571472 |
acatcatcatccattgggtctctaaccaatacctataa |
38571435 |
T |
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