View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1281_low_5 (Length: 676)

Name: NF1281_low_5
Description: NF1281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1281_low_5
NF1281_low_5
[»] chr6 (19 HSPs)
chr6 (29-176)||(931382-931531)
chr6 (29-176)||(10607760-10607909)
chr6 (415-529)||(10607406-10607520)
chr6 (236-344)||(931591-931699)
chr6 (415-534)||(931770-931891)
chr6 (236-344)||(10607591-10607700)
chr6 (486-534)||(29997645-29997693)
chr6 (486-536)||(4826396-4826446)
chr6 (488-527)||(930930-930969)
chr6 (467-534)||(24125972-24126039)
chr6 (463-527)||(1034728-1034793)
chr6 (486-534)||(29998175-29998223)
chr6 (487-534)||(3543064-3543111)
chr6 (467-534)||(7159322-7159389)
chr6 (487-529)||(3542819-3542861)
chr6 (463-527)||(10608296-10608361)
chr6 (487-536)||(24126719-24126768)
chr6 (487-536)||(33480629-33480678)
chr6 (494-534)||(26226603-26226643)
[»] chr4 (37 HSPs)
chr4 (29-176)||(12589644-12589793)
chr4 (29-176)||(46764710-46764859)
chr4 (29-176)||(25655081-25655229)
chr4 (417-534)||(46765099-46765216)
chr4 (29-166)||(11680803-11680941)
chr4 (29-166)||(11689082-11689220)
chr4 (417-534)||(12589287-12589404)
chr4 (415-534)||(11681203-11681322)
chr4 (415-534)||(11689482-11689601)
chr4 (236-344)||(11681024-11681132)
chr4 (236-344)||(11689303-11689411)
chr4 (415-529)||(25654729-25654843)
chr4 (236-344)||(46764919-46765026)
chr4 (236-344)||(12589477-12589584)
chr4 (236-333)||(25654925-25655021)
chr4 (415-529)||(31634748-31634862)
chr4 (486-533)||(25370507-25370554)
chr4 (415-534)||(52757813-52757932)
chr4 (463-527)||(11680283-11680348)
chr4 (463-527)||(11688562-11688627)
chr4 (463-527)||(25655615-25655680)
chr4 (236-329)||(52758007-52758101)
chr4 (487-535)||(21165446-21165494)
chr4 (487-527)||(46764259-46764299)
chr4 (428-496)||(53290178-53290246)
chr4 (292-335)||(3619636-3619679)
chr4 (487-534)||(26611284-26611331)
chr4 (467-534)||(47377579-47377646)
chr4 (292-335)||(53290035-53290078)
chr4 (487-533)||(3847887-3847933)
chr4 (487-537)||(36865718-36865768)
chr4 (457-534)||(1013977-1014054)
chr4 (463-527)||(12590179-12590244)
chr4 (428-509)||(23383335-23383416)
chr4 (457-534)||(48091104-48091181)
chr4 (487-527)||(38014923-38014963)
chr4 (486-534)||(55864875-55864923)
[»] chr1 (7 HSPs)
chr1 (535-665)||(33741340-33741468)
chr1 (415-534)||(45064686-45064805)
chr1 (415-536)||(49610704-49610825)
chr1 (486-534)||(8561736-8561784)
chr1 (487-537)||(43737726-43737776)
chr1 (463-504)||(4640558-4640599)
chr1 (488-529)||(49611562-49611603)
[»] chr5 (14 HSPs)
chr5 (415-536)||(16970962-16971083)
chr5 (29-114)||(4371130-4371220)
chr5 (262-338)||(16970806-16970882)
chr5 (415-534)||(8226642-8226761)
chr5 (486-534)||(2319266-2319314)
chr5 (486-534)||(26268344-26268392)
chr5 (486-534)||(26269021-26269069)
chr5 (61-114)||(4363327-4363380)
chr5 (486-534)||(2319967-2320015)
chr5 (487-534)||(33284024-33284071)
chr5 (487-529)||(33283170-33283212)
chr5 (486-532)||(39166591-39166637)
chr5 (471-540)||(7625467-7625536)
chr5 (487-536)||(39950402-39950451)
[»] chr2 (7 HSPs)
chr2 (415-534)||(16427216-16427335)
chr2 (486-534)||(41984727-41984775)
chr2 (463-534)||(40992222-40992294)
chr2 (486-534)||(41043328-41043376)
chr2 (487-534)||(14573261-14573308)
chr2 (487-536)||(16426551-16426600)
chr2 (461-509)||(36390982-36391030)
[»] chr7 (23 HSPs)
chr7 (415-528)||(29315240-29315353)
chr7 (262-338)||(41224315-41224391)
chr7 (442-529)||(41224114-41224201)
chr7 (486-537)||(48259243-48259294)
chr7 (486-534)||(45887980-45888028)
chr7 (486-534)||(46757377-46757425)
chr7 (262-338)||(29315083-29315156)
chr7 (486-540)||(47331953-47332007)
chr7 (463-527)||(44896053-44896118)
chr7 (488-533)||(48259820-48259865)
chr7 (487-535)||(24322352-24322400)
chr7 (486-534)||(45887279-45887327)
chr7 (464-534)||(29006347-29006418)
chr7 (464-534)||(29007176-29007247)
chr7 (486-534)||(4984809-4984856)
chr7 (486-534)||(4985394-4985442)
chr7 (486-534)||(4989492-4989540)
chr7 (424-512)||(30915756-30915844)
chr7 (487-527)||(44909360-44909400)
chr7 (487-527)||(20890206-20890246)
chr7 (463-534)||(41224819-41224891)
chr7 (487-527)||(41533903-41533943)
chr7 (487-530)||(47331260-47331304)
[»] chr8 (15 HSPs)
chr8 (415-527)||(30272885-30272997)
chr8 (415-527)||(36936626-36936738)
chr8 (415-527)||(36936347-36936459)
chr8 (463-527)||(41348151-41348216)
chr8 (463-534)||(43924490-43924561)
chr8 (415-496)||(41092732-41092813)
chr8 (487-534)||(25876521-25876568)
chr8 (292-335)||(30272764-30272807)
chr8 (487-534)||(34992265-34992312)
chr8 (292-335)||(36936226-36936269)
chr8 (292-335)||(36936505-36936548)
chr8 (262-317)||(41092577-41092632)
chr8 (463-535)||(41092171-41092244)
chr8 (487-535)||(1365828-1365876)
chr8 (461-509)||(40450961-40451009)
[»] chr3 (9 HSPs)
chr3 (433-516)||(46740512-46740595)
chr3 (415-536)||(46721887-46722008)
chr3 (415-535)||(38742103-38742223)
chr3 (236-335)||(38741928-38742028)
chr3 (463-535)||(38336943-38337015)
chr3 (463-534)||(38337454-38337525)
chr3 (458-538)||(44406931-44407011)
chr3 (487-536)||(45242988-45243037)
chr3 (419-504)||(50305401-50305486)
[»] scaffold0180 (1 HSPs)
scaffold0180 (415-505)||(22171-22261)
[»] scaffold0155 (1 HSPs)
scaffold0155 (487-536)||(17337-17386)
[»] scaffold0189 (1 HSPs)
scaffold0189 (488-536)||(12182-12230)
[»] scaffold0041 (1 HSPs)
scaffold0041 (487-535)||(27576-27624)


Alignment Details
Target: chr6 (Bit Score: 135; Significance: 5e-70; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 931382 - 931531
Alignment:
Q  29 aaataactcatttttcaaacagtat--gagatctttggaagcatcagctgcggcaattgggaagaaagagtggggaacaagtggacccatgaaggaacat 126  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  931382 aaataactcatttttcaaacagtatatgagatctttggaagcatcagctgcggcaattggaaagaaagagtggggaacaagtggacccatgaaggaacat 931481  T
Q  127 ggaacatggaatacaaatgaacaaatccagtagtataatcgaacatggtg 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  931482 ggaacatggaatacaaatgaacaaatccagtagtataatcgaacatggtg 931531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 10607909 - 10607760
Alignment:
Q  29 aaataactcatttttcaaacagtat--gagatctttggaagcatcagctgcggcaattgggaagaaagagtggggaacaagtggacccatgaaggaacat 126  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10607909 aaataactcatttttcaaacagtatatgagatctttggaagcatcagctgcggcaattgggaagaaagagtggggaacaagtggatccatgaaggaacat 10607810  T
Q  127 ggaacatggaatacaaatgaacaaatccagtagtataatcgaacatggtg 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10607809 ggaacatggaatacaaatgaacaaatccagtagtataatcgaacatggtg 10607760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 415 - 529
Target Start/End: Complemental strand, 10607520 - 10607406
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10607520 agggagaacaatatagtattgagggagtatgatatgactatatttttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactagtct 10607421  T
Q  515 ttcccaaattaaatg 529  Q
    |||||||||||||||    
T  10607420 ttcccaaattaaatg 10607406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 931591 - 931699
Alignment:
Q  236 ccatatcaatctttgatcgaataatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttataatggt 335  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  931591 ccatatcaatctttgatcaaataatcaaattatcacaaaatgtagaaagagtgaaggagatctatgtgttaaacatgatggtggtggtggttagaatggt 931690  T
Q  336 actcttgga 344  Q
    ||| |||||    
T  931691 actgttgga 931699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 415 - 534
Target Start/End: Original strand, 931770 - 931891
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattctt--catttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaat 512  Q
    ||||| |||| |||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  931770 agggataacagtatagtattgagggagtatgatatgactgtatttttttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaat 931869  T
Q  513 ctttcccaaattaaatgccacc 534  Q
    |||| | |||||||||||||||    
T  931870 cttttctaaattaaatgccacc 931891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 10607700 - 10607591
Alignment:
Q  236 ccatatcaatctttgatcgaataatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgtt-aaacatgatggtggtggtggttataatgg 334  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  10607700 ccatatcaatctttgatcaaataatataattatcacaaaatgtagaaagggtgagggagatctatgtgttaaaacatgatggtagtggtggttataatgg 10607601  T
Q  335 tactcttgga 344  Q
    ||||||||||    
T  10607600 tactcttgga 10607591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 29997693 - 29997645
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29997693 gctttcccatggtggaaaaaaactaatctttcccaaattaaatgccacc 29997645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 486 - 536
Target Start/End: Complemental strand, 4826446 - 4826396
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccat 536  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  4826446 gctttcccgtggtgggaaataactagtctttcccaaattaaatgccaccat 4826396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 488 - 527
Target Start/End: Complemental strand, 930969 - 930930
Alignment:
Q  488 tttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  930969 tttcccatggtgggaaaaaactagtctttcccaaattaaa 930930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 467 - 534
Target Start/End: Complemental strand, 24126039 - 24125972
Alignment:
Q  467 aatctaatggttgaaacttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||| ||||| |  |||||||||||||||||| ||||   ||||||||||||||||||||||    
T  24126039 aatctaatggctgaaaataactttcccatggtgggaaacaactcccctttcccaaattaaatgccacc 24125972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 1034793 - 1034728
Alignment:
Q  463 atttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    |||||||||||||||| ||| ||  |||||| |||||||| ||||||||| |||||||||||||||    
T  1034793 atttaatctaatggttaaaaactaactttcctatggtggggaaaaactaacctttcccaaattaaa 1034728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 29998175 - 29998223
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||||||| ||| |||||||||| |||| |||||||||||||||||    
T  29998175 gctttcccatgatggaaaaaaactaaccttttccaaattaaatgccacc 29998223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 3543064 - 3543111
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||    
T  3543064 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 3543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 534
Target Start/End: Original strand, 7159322 - 7159389
Alignment:
Q  467 aatctaatggttgaaacttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||| | || |||||||||| |||||||||| |   ||||||||||||||||| ||||    
T  7159322 aatctaatggttgagatttactttcccatgatgggaaaaaagtttgctttcccaaattaaatggcacc 7159389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 529
Target Start/End: Complemental strand, 3542861 - 3542819
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatg 529  Q
    |||||||||||||||||||||||   |||||||||||||||||    
T  3542861 ctttcccatggtgggaaaaaactctcctttcccaaattaaatg 3542819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 10608296 - 10608361
Alignment:
Q  463 atttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    |||||||||||||||  ||| ||  |||||||||||||||||||||| |  |||||||||||||||    
T  10608296 atttaatctaatggtcaaaaactaactttcccatggtgggaaaaaaccagcctttcccaaattaaa 10608361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 536
Target Start/End: Original strand, 24126719 - 24126768
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccat 536  Q
    |||||||||| ||||||| ||||   ||||||||||||||||||||||||    
T  24126719 ctttcccatgatgggaaacaactcccctttcccaaattaaatgccaccat 24126768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 536
Target Start/End: Original strand, 33480629 - 33480678
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccat 536  Q
    |||||||||||||||||| ||||   ||||||||||||||||| ||||||    
T  33480629 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcaccat 33480678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 494 - 534
Target Start/End: Complemental strand, 26226643 - 26226603
Alignment:
Q  494 atggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||| |||||||||| |||||||||||||||| |||||    
T  26226643 atggtggaaaaaaactaacctttcccaaattaaataccacc 26226603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 5e-70; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 12589793 - 12589644
Alignment:
Q  29 aaataactcatttttcaaacagtat--gagatctttggaagcatcagctgcggcaattgggaagaaagagtggggaacaagtggacccatgaaggaacat 126  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12589793 aaataactcatttttcaaacagtatatgagatctttggaagcatcagttgcggcaattgggaagaaagagtggggaacaagtggacccatgaaggaacat 12589694  T
Q  127 ggaacatggaatacaaatgaacaaatccagtagtataatcgaacatggtg 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12589693 ggaacatggaatacaaatgaacaaatccagtagtataatcgaacatggtg 12589644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 46764710 - 46764859
Alignment:
Q  29 aaataactcatttttcaaacagtat--gagatctttggaagcatcagctgcggcaattgggaagaaagagtggggaacaagtggacccatgaaggaacat 126  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46764710 aaataactcatttttcaaacagtatatgagatctttggaagcatcagttgcggcaattgggaagaaagagtggggaacaagtggacccatgaaggaacat 46764809  T
Q  127 ggaacatggaatacaaatgaacaaatccagtagtataatcgaacatggtg 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46764810 ggaacatggaatacaaatgaacaaatccagtagtataatcgaacatggtg 46764859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 25655229 - 25655081
Alignment:
Q  29 aaataactcatttttcaaacagtat--gagatctttggaagcatcagctgcggcaattgggaagaaagagtggggaacaagtggacccatgaaggaacat 126  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25655229 aaataactcatttttcaaacagtatatgagatctttggaagcatcagttgcggcaattgggaagaaagagtggggaacaagtggacccatgaaggaac-t 25655131  T
Q  127 ggaacatggaatacaaatgaacaaatccagtagtataatcgaacatggtg 176  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25655130 ggaacatggaatacaaatgaacaaatccagtagtataatcaaacatggtg 25655081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 417 - 534
Target Start/End: Original strand, 46765099 - 46765216
Alignment:
Q  417 ggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatcttt 516  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46765099 ggagaacaatatagtattgagggagtatgatatgactgtattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactagtcttt 46765198  T
Q  517 cccaaattaaatgccacc 534  Q
    ||||||||||||||||||    
T  46765199 cccaaattaaatgccacc 46765216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 11680803 - 11680941
Alignment:
Q  29 aaataactcatttttcaaacagtat--gagatctttggaagcatcagctgcggcaattgggaagaaagagtggggaacaagtggacccatgaaggaacat 126  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11680803 aaataactcatttttcaa-cagtatatgagatctttggaagcatcagctgcggcaattgggaagaaagagtggggaacaagtagacccatgaaggaacat 11680901  T
Q  127 ggaacatggaatacaaatgaacaaatccagtagtataatc 166  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  11680902 ggaacatggaatacaaatgaacaaatcaaatagtataatc 11680941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 11689082 - 11689220
Alignment:
Q  29 aaataactcatttttcaaacagtat--gagatctttggaagcatcagctgcggcaattgggaagaaagagtggggaacaagtggacccatgaaggaacat 126  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11689082 aaataactcatttttcaa-cagtatatgagatctttggaagcatcagctgcggcaattgggaagaaagagtggggaacaagtagacccatgaaggaacat 11689180  T
Q  127 ggaacatggaatacaaatgaacaaatccagtagtataatc 166  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  11689181 ggaacatggaatacaaatgaacaaatcaaatagtataatc 11689220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 417 - 534
Target Start/End: Complemental strand, 12589404 - 12589287
Alignment:
Q  417 ggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatcttt 516  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12589404 ggagaacaatatagtattgagggagtatgatatgaatgtattcttcatttaatctaatggttgaaacttgctttcccatagtgggaaaaaactaatcttt 12589305  T
Q  517 cccaaattaaatgccacc 534  Q
    ||||||||||||| ||||    
T  12589304 cccaaattaaatgtcacc 12589287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 415 - 534
Target Start/End: Original strand, 11681203 - 11681322
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  11681203 agggagaacaatatagtattgagggagtatgatatgactgtactcttcatttaatctaatggttgaaatttgctttcccatggtgggaaaaaactagtct 11681302  T
Q  515 ttcccaaattaaatgccacc 534  Q
    || |||||||||||||||||    
T  11681303 tttccaaattaaatgccacc 11681322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 415 - 534
Target Start/End: Original strand, 11689482 - 11689601
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  11689482 agggagaacaatatagtattgagggagtatgatatgactgtactcttcatttaatctaatggttgaaatttgctttcccatggtgggaaaaaactagtct 11689581  T
Q  515 ttcccaaattaaatgccacc 534  Q
    || |||||||||||||||||    
T  11689582 tttccaaattaaatgccacc 11689601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 11681024 - 11681132
Alignment:
Q  236 ccatatcaatctttgatcgaataatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttataatggt 335  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11681024 ccatatcaatcttagatcaaataatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttataatggt 11681123  T
Q  336 actcttgga 344  Q
    ||| |||||    
T  11681124 actgttgga 11681132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 11689303 - 11689411
Alignment:
Q  236 ccatatcaatctttgatcgaataatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttataatggt 335  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11689303 ccatatcaatcttagatcaaataatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttataatggt 11689402  T
Q  336 actcttgga 344  Q
    ||| |||||    
T  11689403 actgttgga 11689411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 415 - 529
Target Start/End: Complemental strand, 25654843 - 25654729
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||    
T  25654843 agggagaacaatatagtattgagggagtatgatatgactgtattcttcatttaatttaatggttgaaacttgtttttccatggtgggaaaaaactagtct 25654744  T
Q  515 ttcccaaattaaatg 529  Q
    |||||||||||||||    
T  25654743 ttcccaaattaaatg 25654729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 46764919 - 46765026
Alignment:
Q  236 ccatatcaatctttgatcgaataatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttataatggt 335  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  46764919 ccatatcaatctttgatcaaataatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggt-gtggtggttataatggt 46765017  T
Q  336 actcttgga 344  Q
    ||| |||||    
T  46765018 actgttgga 46765026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 236 - 344
Target Start/End: Complemental strand, 12589584 - 12589477
Alignment:
Q  236 ccatatcaatctttgatcgaataatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttataatggt 335  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  12589584 ccatatcaatctttgatcaaataatcaaattatcacaaaatgtagaaagagtgatggagatctatgtgttaaacatgatggt-gtggtggttataatggt 12589486  T
Q  336 actcttgga 344  Q
    ||| |||||    
T  12589485 actgttgga 12589477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 236 - 333
Target Start/End: Complemental strand, 25655021 - 25654925
Alignment:
Q  236 ccatatcaatctttgatcgaataatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttataatg 333  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25655021 ccatatcaatctttgatcaaataatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggt-gtggtggttataatg 25654925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 415 - 529
Target Start/End: Original strand, 31634748 - 31634862
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| |||  ||| |||||||||||||||| || | |||||||||||  ||||||||||| |||||| |||| ||||| ||| ||||||||| |||    
T  31634748 agggagaaaaattgagtgttgagggagtatgataagagtatattcttcattagatctaatggttaaaacttacttttccatgatggaaaaaaactagtct 31634847  T
Q  515 ttcccaaattaaatg 529  Q
    ||| |||||||||||    
T  31634848 ttctcaaattaaatg 31634862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 486 - 533
Target Start/End: Complemental strand, 25370554 - 25370507
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccac 533  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||    
T  25370554 gctttcccatggtgggaaaaaactagcctttcccaaattaaatgccac 25370507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 415 - 534
Target Start/End: Complemental strand, 52757932 - 52757813
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| ||| || ||||||||||| |||||| || | | ||||  ||||||||||| | || |||||| |||||| |||| ||||||||| |  |||    
T  52757932 agggagaaaaatctaatattgagggagcatgataagagtatgttctctatttaatctaaagattaaaacttactttcctatggagggaaaaaagtcttct 52757833  T
Q  515 ttcccaaattaaatgccacc 534  Q
    ||||||||||||||| ||||    
T  52757832 ttcccaaattaaatggcacc 52757813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 11680348 - 11680283
Alignment:
Q  463 atttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    |||||||||||||||  ||| ||  ||||||||||||||||||||||||| |||||||||||||||    
T  11680348 atttaatctaatggtcaaaaactaactttcccatggtgggaaaaaactaacctttcccaaattaaa 11680283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 11688627 - 11688562
Alignment:
Q  463 atttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    |||||||||||||||  ||| ||  ||||||||||||||||||||||||| |||||||||||||||    
T  11688627 atttaatctaatggtcaaaaactaactttcccatggtgggaaaaaactaacctttcccaaattaaa 11688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 25655615 - 25655680
Alignment:
Q  463 atttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    |||||||||||||||  ||| ||  |||||||||||||||||||||||| ||||||||||||||||    
T  25655615 atttaatctaatggtcaaaaactaactttcccatggtgggaaaaaactagtctttcccaaattaaa 25655680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 52758101 - 52758007
Alignment:
Q  236 ccatatcaatctttgatcgaat-aatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttat 329  Q
    |||||||||| ||||||| ||| |||||||| |||||||||| |||| | |||||  ||||| ||  ||||||||||| || |||||||||||||    
T  52758101 ccatatcaatttttgatcaaattaatcaaatcatcacaaaatatagagaaagtgaacgagatttagatgttaaacatggtgatggtggtggttat 52758007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 535
Target Start/End: Complemental strand, 21165494 - 21165446
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacca 535  Q
    ||||| |||||||||||| ||||| |||||||||||||||||| |||||    
T  21165494 ctttctcatggtgggaaagaactattctttcccaaattaaatggcacca 21165446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 46764299 - 46764259
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  46764299 ctttcccatggtgggaaaaaactagtcttttccaaattaaa 46764259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 496
Target Start/End: Original strand, 53290178 - 53290246
Alignment:
Q  428 tagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatg 496  Q
    |||||| || |||||||||||  | | ||||||||||| |||||||||||| |||||| ||||||||||    
T  53290178 tagtatcgaaggagtatgataaaagtgtattcttcattgaatctaatggttaaaacttactttcccatg 53290246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 3619636 - 3619679
Alignment:
Q  292 gagatctatgtgttaaacatgatggtggtggtggttataatggt 335  Q
    |||||||| |||||||||||| |||||||||||||||| |||||    
T  3619636 gagatctaggtgttaaacatggtggtggtggtggttatgatggt 3619679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 26611284 - 26611331
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||    
T  26611284 ctttcccatggtgggaaaaaactctcctttcccaaattaaatgacacc 26611331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 467 - 534
Target Start/End: Original strand, 47377579 - 47377646
Alignment:
Q  467 aatctaatggttgaaacttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||| ||||| |  |||||||||||||||||| ||||   ||||||||||||||||| ||||    
T  47377579 aatctaatggctgaaaataactttcccatggtgggaaacaactcccctttcccaaattaaatggcacc 47377646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 53290035 - 53290078
Alignment:
Q  292 gagatctatgtgttaaacatgatggtggtggtggttataatggt 335  Q
    |||||||| |||||||||||| |||||||||||||||| |||||    
T  53290035 gagatctaggtgttaaacatggtggtggtggtggttatgatggt 53290078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 533
Target Start/End: Complemental strand, 3847933 - 3847887
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccac 533  Q
    ||||||||||||||||||||| |   |||||||||||||||||||||    
T  3847933 ctttcccatggtgggaaaaaagtctcctttcccaaattaaatgccac 3847887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 537
Target Start/End: Original strand, 36865718 - 36865768
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccatc 537  Q
    |||||||||||||||||| ||||   ||||||||||||||||| |||||||    
T  36865718 ctttcccatggtgggaaagaactctcctttcccaaattaaatgtcaccatc 36865768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 534
Target Start/End: Original strand, 1013977 - 1014054
Alignment:
Q  457 ttcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||| ||| |||||||||||| || ||  |||||||||||||||||| ||||   ||| ||||||||||||| ||||    
T  1013977 ttcttgattaaatctaatggtttaatctaactttcccatggtgggaaacaacttcacttacccaaattaaatgtcacc 1014054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 527
Target Start/End: Original strand, 12590179 - 12590244
Alignment:
Q  463 atttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    |||||||||||||||  ||| ||  |||||||||||||| |||||||||  |||||||||||||||    
T  12590179 atttaatctaatggtcaaaaactaactttcccatggtggaaaaaaactagcctttcccaaattaaa 12590244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 509
Target Start/End: Complemental strand, 23383416 - 23383335
Alignment:
Q  428 tagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaact 509  Q
    ||||||||| ||||||||||| || | | |||||||||| ||| ||||| | ||| |  |||||||||||||||||| ||||    
T  23383416 tagtattgatggagtatgataagagtgtgttcttcatttgatcgaatggataaaattaactttcccatggtgggaaacaact 23383335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 534
Target Start/End: Original strand, 48091104 - 48091181
Alignment:
Q  457 ttcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||| ||||||||||  ||||| |   ||||||||||||||||||| | ||| |||||||| || ||||||||||    
T  48091104 ttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatatgaaatgccacc 48091181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 38014923 - 38014963
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    ||||||||||||||| ||||||||  |||||||||||||||    
T  38014923 ctttcccatggtggggaaaaactagcctttcccaaattaaa 38014963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 55864875 - 55864923
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||| |||||||||||||||||||  |||||  |||||||||||||||    
T  55864875 gcttttccatggtgggaaaaaactagcctttcttaaattaaatgccacc 55864923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 535 - 665
Target Start/End: Original strand, 33741340 - 33741468
Alignment:
Q  535 atcatgattggcaaagcggtcctaagcattttcgttttcacagacatcttcactatcacagatgacataatactctactgcaa-atgatccaaaaattgt 633  Q
    ||||||||||| |||||||||||||   |||||  ||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||    
T  33741340 atcatgattggtaaagcggtcctaa---ttttcactttcacaaacatcttcactatcacggatgacataatactcgactgcaacatgatccaaaaattgt 33741436  T
Q  634 gccaccattttccaaaaacaacaacacccttt 665  Q
    |||||||||||||||||||||||| |||||||    
T  33741437 gccaccattttccaaaaacaacaaaacccttt 33741468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 415 - 534
Target Start/End: Complemental strand, 45064805 - 45064686
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| |||  ||| |||||||||||||||| || | ||||||| |||  ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  45064805 agggagaaaaattgagtgttgagggagtatgataagagtatattcttaattagatctaatggttaaaacttactttcccatgatgggaaaaaactaatct 45064706  T
Q  515 ttcccaaattaaatgccacc 534  Q
    ||||||||||||||| ||||    
T  45064705 ttcccaaattaaatggcacc 45064686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 415 - 536
Target Start/End: Complemental strand, 49610825 - 49610704
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| ||| |||||||||||||| |||||| || | | || | |||||||||||| |||| |||||| ||||||||||| ||||||||| |  |||    
T  49610825 agggagaaaaatctagtattgagggagcatgataagagtatgttatccatttaatctaaaggttaaaacttactttcccatggagggaaaaaagtcttct 49610726  T
Q  515 ttcccaaattaaatgccaccat 536  Q
    ||||||||| ||||| ||||||    
T  49610725 ttcccaaataaaatggcaccat 49610704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 8561736 - 8561784
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  8561736 gctttcccatgatgggaaaaaactagtctttcccaaattaaatgtcacc 8561784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 537
Target Start/End: Complemental strand, 43737776 - 43737726
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccatc 537  Q
    |||||||||||||||||| ||||   ||||||||||||||||| |||||||    
T  43737776 ctttcccatggtgggaaataactctactttcccaaattaaatggcaccatc 43737726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 504
Target Start/End: Complemental strand, 4640599 - 4640558
Alignment:
Q  463 atttaatctaatggttgaaacttgctttcccatggtgggaaa 504  Q
    |||| ||||||||||||||| || ||||||||||||||||||    
T  4640599 atttgatctaatggttgaaaattactttcccatggtgggaaa 4640558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 529
Target Start/End: Original strand, 49611562 - 49611603
Alignment:
Q  488 tttcccatggtgggaaaaaactaatctttcccaaattaaatg 529  Q
    ||||||||| |||||||||||||  |||||||||||||||||    
T  49611562 tttcccatgatgggaaaaaactagcctttcccaaattaaatg 49611603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 8e-29; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 415 - 536
Target Start/End: Original strand, 16970962 - 16971083
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| |||  ||| |||||||||||||||| || | |||||||||||  ||||||||||| |||||| |||||||||| ||||||||||||| |||    
T  16970962 agggagaaaaattgagtgttgagggagtatgataagagtgtattcttcattagatctaatggttaaaacttactttcccatgatgggaaaaaactagtct 16971061  T
Q  515 ttcccaaattaaatgccaccat 536  Q
    ||||||||||||||| ||||||    
T  16971062 ttcccaaattaaatggcaccat 16971083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 4371220 - 4371130
Alignment:
Q  29 aaataactcatttttcaaacagtat--gagatctt---tggaagcatcagctgcggcaattgggaagaaagagtggggaacaagtggaccc 114  Q
    |||| ||||||||||||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4371220 aaatgactcatttttcaaacagtatatgagatcttctttggaagcatcagctgcggcaattgggaagaaagagtggggaacaggtggaccc 4371130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 16970806 - 16970882
Alignment:
Q  262 aaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttataatggtact 338  Q
    ||||||||||||||| |||| | ||||||||||||||| |||||||| ||| |||||||||||||||| ||||||||    
T  16970806 aaattatcacaaaatatagagaaagtgagggagatctaggtgttaaatatggtggtggtggtggttatgatggtact 16970882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 415 - 534
Target Start/End: Complemental strand, 8226761 - 8226642
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| |||||||||||||||||| |||||| || | | |||| |||||||||||| |||| ||| || |||| |||||| ||||||||| |  |||    
T  8226761 agggagaaaaatatagtattgagggagcatgataagagtatgttctccatttaatctaaaggttaaaatttacttttccatggagggaaaaaattcttct 8226662  T
Q  515 ttcccaaattaaatgccacc 534  Q
    ||| ||||||||||| ||||    
T  8226661 ttctcaaattaaatggcacc 8226642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 2319314 - 2319266
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  2319314 gctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacc 2319266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 26268392 - 26268344
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  26268392 gctttcccatggtgggaaaaaactaacatttcccaaattaaatgccacc 26268344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 26269021 - 26269069
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  26269021 gctttcccatgatgggaaaaaactaacctttcccaaattaaatgccacc 26269069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 4363380 - 4363327
Alignment:
Q  61 ttggaagcatcagctgcggcaattgggaagaaagagtggggaacaagtggaccc 114  Q
    ||||||||| |||| |  ||||||||||||||||||||||||||||||||||||    
T  4363380 ttggaagcaacagcaggagcaattgggaagaaagagtggggaacaagtggaccc 4363327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 2319967 - 2320015
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  2319967 gctttcctatggtgggaaaaaactagcctttcccaaattaaatgccacc 2320015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 33284024 - 33284071
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  33284024 ctttcccatggtgggataaaactaacctttcccaaattaaatggcacc 33284071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 487 - 529
Target Start/End: Complemental strand, 33283212 - 33283170
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatg 529  Q
    |||||||||| ||||| |||||||| |||||||||||||||||    
T  33283212 ctttcccatgatgggataaaactaacctttcccaaattaaatg 33283170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 532
Target Start/End: Complemental strand, 39166637 - 39166591
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgcca 532  Q
    ||||| |||| |||||||||||||| | |||||||||||||||||||    
T  39166637 gcttttccatagtgggaaaaaactagtttttcccaaattaaatgcca 39166591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 471 - 540
Target Start/End: Complemental strand, 7625536 - 7625467
Alignment:
Q  471 taatggttgaaacttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccatcatg 540  Q
    |||||||||| | || |||||||||| ||||||| || |   ||||||||||||||||| ||||||||||    
T  7625536 taatggttgagatttactttcccatgatgggaaagaagtttgctttcccaaattaaatgacaccatcatg 7625467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 536
Target Start/End: Complemental strand, 39950451 - 39950402
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccat 536  Q
    |||||||||||||||||| ||||   ||||||||||||||||| ||||||    
T  39950451 ctttcccatggtgggaaagaactctcctttcccaaattaaatggcaccat 39950402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 1e-27; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 415 - 534
Target Start/End: Original strand, 16427216 - 16427335
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| |||  ||| |||||||||||||||| || | |||||||||||  ||||||||||| |||||| |||||||||| ||| |||||||||||||    
T  16427216 agggagaaaaattgagtgttgagggagtatgataagagtatattcttcattagatctaatggttaaaacttactttcccatgatggaaaaaaactaatct 16427315  T
Q  515 ttcccaaattaaatgccacc 534  Q
    ||||||||||||||| ||||    
T  16427316 ttcccaaattaaatgacacc 16427335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 41984775 - 41984727
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  41984775 gctttcccatggtgagaaaaaactagcctttcccaaattaaatgccacc 41984727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 534
Target Start/End: Complemental strand, 40992294 - 40992222
Alignment:
Q  463 atttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||| ||||||| ||| ||  |||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  40992294 atttaatcaaatggttaaaaactaactttcccatggtaggaaaaaacaaacctttcccaaattaaatggcacc 40992222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 41043328 - 41043376
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||| ||||| |||||||||||||  ||||||||||||||||||||||    
T  41043328 gcttttccatgatgggaaaaaactagcctttcccaaattaaatgccacc 41043376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 14573308 - 14573261
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||    
T  14573308 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 14573261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 536
Target Start/End: Complemental strand, 16426600 - 16426551
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccat 536  Q
    |||| ||||||||||||||||| |  ||||||||||||||||| ||||||    
T  16426600 cttttccatggtgggaaaaaacaagcctttcccaaattaaatggcaccat 16426551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 461 - 509
Target Start/End: Complemental strand, 36391030 - 36390982
Alignment:
Q  461 tcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaact 509  Q
    |||||| ||||||||||| ||| || |||||||||||||||||| ||||    
T  36391030 tcatttgatctaatggttaaaatttactttcccatggtgggaaacaact 36390982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 2e-26; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 528
Target Start/End: Original strand, 29315240 - 29315353
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| |||  ||| |||||||||||||||| || | |||||||||||  ||||||||||| |||||| |||||||||| ||||||||||||| |||    
T  29315240 agggagaaaaattgagtgttgagggagtatgataagagtgtattcttcattagatctaatggttaaaacttactttcccatgatgggaaaaaactagtct 29315339  T
Q  515 ttcccaaattaaat 528  Q
    ||||||||||||||    
T  29315340 ttcccaaattaaat 29315353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 41224391 - 41224315
Alignment:
Q  262 aaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttataatggtact 338  Q
    |||| |||||||||| |||| | ||||||||||||||| |||||||||||| |||||||||||||||| ||||||||    
T  41224391 aaatcatcacaaaatatagagaaagtgagggagatctaggtgttaaacatggtggtggtggtggttatgatggtact 41224315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 442 - 529
Target Start/End: Complemental strand, 41224201 - 41224114
Alignment:
Q  442 tatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatctttcccaaattaaatg 529  Q
    ||||||| || | |||||||||||  ||||||||||| |||||| |||||||||| ||| ||||||||| ||||||||||||| ||||    
T  41224201 tatgataagagtgtattcttcattagatctaatggttaaaacttactttcccatgatggaaaaaaactagtctttcccaaatttaatg 41224114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 486 - 537
Target Start/End: Complemental strand, 48259294 - 48259243
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccatc 537  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  48259294 gctttcctatggtgggaaaaaactagtctttcccaaattaaatgccaccatc 48259243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 45887980 - 45888028
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  45887980 gctttcccatggtgggaaaaaactagcctttcccaaattaaatgccacc 45888028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 46757377 - 46757425
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  46757377 gctttcccatggtggggaaaaactagtctttcccaaattaaatgccacc 46757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 29315083 - 29315156
Alignment:
Q  262 aaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttataatggtact 338  Q
    |||| |||||||||| |||| | ||||||||||||||| |||||||||   ||||||||||||||||| ||||||||    
T  29315083 aaatcatcacaaaatatagagaaagtgagggagatctaggtgttaaac---atggtggtggtggttatgatggtact 29315156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 486 - 540
Target Start/End: Original strand, 47331953 - 47332007
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccatcatg 540  Q
    |||||||||||||||||||||||||  ||||||||||||||||| |||| |||||    
T  47331953 gctttcccatggtgggaaaaaactagcctttcccaaattaaatgtcaccttcatg 47332007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 44896118 - 44896053
Alignment:
Q  463 atttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    |||||||||||||||| ||| ||  ||||||||||||||| |||||||| ||||||||||||||||    
T  44896118 atttaatctaatggttaaaaactaactttcccatggtggggaaaaactagtctttcccaaattaaa 44896053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 533
Target Start/End: Original strand, 48259820 - 48259865
Alignment:
Q  488 tttcccatggtgggaaaaaactaatctttcccaaattaaatgccac 533  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  48259820 tttcccatggtgggaaaaaactaacatttcccaaattaaatgccac 48259865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 535
Target Start/End: Original strand, 24322352 - 24322400
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacca 535  Q
    |||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  24322352 ctttcccatggtgggataaaactaacctttcccaaattaaatggcacca 24322400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 45887327 - 45887279
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  45887327 gctttcccatggtgggaaaaaactagcctttcccaaattaaacgccacc 45887279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 534
Target Start/End: Complemental strand, 29006418 - 29006347
Alignment:
Q  464 tttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||||||||||| ||| ||  |||||||||||||||||||||| |  ||||||||||||||||| ||||    
T  29006418 tttaatctaatggttaaaaactaactttcccatggtgggaaaaaacaagcctttcccaaattaaatggcacc 29006347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 534
Target Start/End: Original strand, 29007176 - 29007247
Alignment:
Q  464 tttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||||||||||| ||| ||  |||||||||||||||||||||| |  ||||||||||||||||| ||||    
T  29007176 tttaatctaatggttaaaaactaactttcccatggtgggaaaaaacaagcctttcccaaattaaatgacacc 29007247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 534
Target Start/End: Complemental strand, 4984856 - 4984809
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  4984856 gcttttccatggtgg-aaaaaactaacctttcccaaattaaatgccacc 4984809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 4985394 - 4985442
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||||||||||||||   |||||||||||||||| ||||    
T  4985394 gctttcccatggtgggaaaaaactagcatttcccaaattaaatgtcacc 4985442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 534
Target Start/End: Original strand, 4989492 - 4989540
Alignment:
Q  486 gctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||||||||||||||   |||||||||||||||| ||||    
T  4989492 gctttcccatggtgggaaaaaactagcatttcccaaattaaatgtcacc 4989540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 512
Target Start/End: Complemental strand, 30915844 - 30915756
Alignment:
Q  424 aatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaat 512  Q
    |||||||| ||||| ||||||||||  | | |  ||||||||| ||||||||| | ||| || |||||||||||||||||| |||||||    
T  30915844 aatatagtgttgagagagtatgataaaagtatggtcttcatttgatctaatgggtaaaatttactttcccatggtgggaaacaactaat 30915756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 487 - 527
Target Start/End: Original strand, 44909360 - 44909400
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  44909360 ctttcccatggtgggaaaaaacttacctttcccaaattaaa 44909400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 20890246 - 20890206
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    |||||||||||||||||||||||   |||||||||||||||    
T  20890246 ctttcccatggtgggaaaaaactgtcctttcccaaattaaa 20890206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 463 - 534
Target Start/End: Original strand, 41224819 - 41224891
Alignment:
Q  463 atttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||| ||||||| ||| ||  |||||||||||||||||||||  |  ||||||||||||||||| ||||    
T  41224819 atttaatcaaatggttaaaaactaactttcccatggtgggaaaaaataagcctttcccaaattaaatggcacc 41224891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 487 - 527
Target Start/End: Complemental strand, 41533943 - 41533903
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    |||||||||||||| |||||||| | |||||||||||||||    
T  41533943 ctttcccatggtggaaaaaaacttacctttcccaaattaaa 41533903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 487 - 530
Target Start/End: Complemental strand, 47331304 - 47331260
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatc-tttcccaaattaaatgc 530  Q
    ||||| ||||||||||||||||||| | |||||||||||||||||    
T  47331304 ctttctcatggtgggaaaaaactaaccttttcccaaattaaatgc 47331260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 527
Target Start/End: Original strand, 30272885 - 30272997
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| ||| |||||||||||||||||||||  | | ||||||||||| |||||||||||| |||||| |||||||||| |||||||||| |   ||    
T  30272885 agggagaaaaatctagtattgagggagtatgataaaagtgtattcttcattgaatctaatggttaaaacttactttcccatgatgggaaaaaagtttgct 30272984  T
Q  515 ttcccaaattaaa 527  Q
    |||||||||||||    
T  30272985 ttcccaaattaaa 30272997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 527
Target Start/End: Original strand, 36936626 - 36936738
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| ||| |||||||||||||||||||||  | | ||||||| ||| |||||||||||| ||| || |||||||||| |||||||||| |   ||    
T  36936626 agggagaaaaatctagtattgagggagtatgataaaagtgtattctttattgaatctaatggttaaaatttactttcccatgatgggaaaaaagtttgct 36936725  T
Q  515 ttcccaaattaaa 527  Q
    |||||||||||||    
T  36936726 ttcccaaattaaa 36936738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 415 - 527
Target Start/End: Original strand, 36936347 - 36936459
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| ||| ||||||| |||||||||||||  | | ||||||| ||| |||||||||||| ||| || |||||||||| |||||||||| |   ||    
T  36936347 agggagaaaaatctagtattaagggagtatgataaaagtgtattctttattgaatctaatggttaaaatttactttcccatgatgggaaaaaagtttgct 36936446  T
Q  515 ttcccaaattaaa 527  Q
    |||||||||||||    
T  36936447 ttcccaaattaaa 36936459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 41348216 - 41348151
Alignment:
Q  463 atttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaa 527  Q
    |||||||||||||||| ||| ||  ||||||||||||||| ||||||||| |||||||||||||||    
T  41348216 atttaatctaatggttaaaaactaactttcccatggtggggaaaaactaacctttcccaaattaaa 41348151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 534
Target Start/End: Complemental strand, 43924561 - 43924490
Alignment:
Q  463 atttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||||||| |||  ||| | ||||||||||||||||||| ||||   ||||||||||||||||||||||    
T  43924561 atttaatctaacggtcaaaattagctttcccatggtgggaaacaacttccctttcccaaattaaatgccacc 43924490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 41092732 - 41092813
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatg 496  Q
    |||||||| |||  ||| ||||||||||||||||  | | |||||||||||  ||||||||||| |||||| ||||||||||    
T  41092732 agggagaaaaattgagtgttgagggagtatgataaaagtgtattcttcattagatctaatggttaaaacttactttcccatg 41092813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 534
Target Start/End: Complemental strand, 25876568 - 25876521
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||||||||||||||||| |  |||||||||||||||||| ||||    
T  25876568 ctttcccatggtgggaaaaaaatcttctttcccaaattaaatggcacc 25876521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 30272764 - 30272807
Alignment:
Q  292 gagatctatgtgttaaacatgatggtggtggtggttataatggt 335  Q
    |||||||| |||||||||||| |||||||||||||||| |||||    
T  30272764 gagatctaggtgttaaacatggtggtggtggtggttatgatggt 30272807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 534
Target Start/End: Original strand, 34992265 - 34992312
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||    
T  34992265 ctttcccatggtgggaaaaaactctcctttcccaaattaaatggcacc 34992312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 36936226 - 36936269
Alignment:
Q  292 gagatctatgtgttaaacatgatggtggtggtggttataatggt 335  Q
    |||||||| |||||||||||| |||||||||||||||| |||||    
T  36936226 gagatctaggtgttaaacatggtggtggtggtggttatgatggt 36936269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 36936505 - 36936548
Alignment:
Q  292 gagatctatgtgttaaacatgatggtggtggtggttataatggt 335  Q
    |||||||| |||||||||||| |||||||||||||||| |||||    
T  36936505 gagatctaggtgttaaacatggtggtggtggtggttatgatggt 36936548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 41092577 - 41092632
Alignment:
Q  262 aaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggt 317  Q
    |||| |||||||||| |||| | ||||||||||||||| |||||||||||| ||||    
T  41092577 aaatcatcacaaaatatagagaaagtgagggagatctaggtgttaaacatggtggt 41092632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 535
Target Start/End: Complemental strand, 41092244 - 41092171
Alignment:
Q  463 atttaatctaatggttgaaa-cttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacca 535  Q
    |||||||| ||||||| ||| ||  |||| ||||||||||||||||| |  ||||||||||||||||| |||||    
T  41092244 atttaatcaaatggttaaaaactaacttttccatggtgggaaaaaacaagcctttcccaaattaaatggcacca 41092171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 487 - 535
Target Start/End: Complemental strand, 1365876 - 1365828
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacca 535  Q
    |||||||||||||||||| || |   |||||||||||||||||||||||    
T  1365876 ctttcccatggtgggaaagaagtctcctttcccaaattaaatgccacca 1365828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 461 - 509
Target Start/End: Original strand, 40450961 - 40451009
Alignment:
Q  461 tcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaact 509  Q
    |||||| ||||||||||| ||| || |||||||||||||||||| ||||    
T  40450961 tcatttgatctaatggttaaaatttactttcccatggtgggaaacaact 40451009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 516
Target Start/End: Original strand, 46740512 - 46740595
Alignment:
Q  433 ttgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatcttt 516  Q
    |||||||||||||||| || | | || ||||||||||| |||| || |||||| |||||||||||||||||||||||| |||||    
T  46740512 ttgagggagtatgataagagtgtgtttttcatttaatccaatgattaaaacttactttcccatggtgggaaaaaactagtcttt 46740595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 415 - 536
Target Start/End: Original strand, 46721887 - 46722008
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| ||| |||||||||||||| ||||||  | | | |||| |||||||| ||| |||| |||||| ||||||||| | || |||||| |  |||    
T  46721887 agggagaaaaatctagtattgagggagcatgataaaagtatgttctccatttaatttaaaggttaaaacttactttcccatagaggaaaaaaagtcttct 46721986  T
Q  515 ttcccaaattaaatgccaccat 536  Q
    ||||||||||||||| ||||||    
T  46721987 ttcccaaattaaatgacaccat 46722008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 415 - 535
Target Start/End: Original strand, 38742103 - 38742223
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct 514  Q
    |||||||| ||| |||||||||||||| |||||| || | | |||| ||||| |||||| |||| |||||| |||| |||| | ||||||||| |  |||    
T  38742103 agggagaaaaatctagtattgagggagcatgataagagtatgttctccatttgatctaaaggttaaaacttacttttccattgagggaaaaaagtcttct 38742202  T
Q  515 ttcccaaattaaatgccacca 535  Q
    |||||| |||||||| |||||    
T  38742203 ttcccagattaaatggcacca 38742223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 236 - 335
Target Start/End: Original strand, 38741928 - 38742028
Alignment:
Q  236 ccatatcaatctttgatcgaat-aatcaaattatcacaaaatgtagaaagagtgagggagatctatgtgttaaacatgatggtggtggtggttataatgg 334  Q
    |||||||||| ||||||| ||| |||||||| |||||||||| |||| | |||||  ||||| ||  ||||||||||| || ||||||||||||| ||||    
T  38741928 ccatatcaatttttgatcaaattaatcaaatcatcacaaaatatagagaaagtgaacgagatttagatgttaaacatggtgatggtggtggttatgatgg 38742027  T
Q  335 t 335  Q
    |    
T  38742028 t 38742028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 535
Target Start/End: Complemental strand, 38337015 - 38336943
Alignment:
Q  463 atttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacca 535  Q
    ||||||||||| |||  ||| | ||||||||||||||||||| ||||   ||| |||||||||||||||||||    
T  38337015 atttaatctaacggtcaaaattagctttcccatggtgggaaacaacttcccttccccaaattaaatgccacca 38336943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 534
Target Start/End: Original strand, 38337454 - 38337525
Alignment:
Q  463 atttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacc 534  Q
    ||||||||||| |||  ||| | ||||||||||||||||||| ||||   ||||||||||||||| ||||||    
T  38337454 atttaatctaacggtcaaaattagctttcccatggtgggaaacaacttccctttcccaaattaaacgccacc 38337525  T

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Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 538
Target Start/End: Original strand, 44406931 - 44407011
Alignment:
Q  458 tcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaaaactaatct-ttcccaaattaaatgccaccatca 538  Q
    ||||||||| ||||||||| | ||| || |||||||||||||||||| |||| |||| ||||||   |||||||||||||||    
T  44406931 tcttcatttgatctaatgggtaaaatttactttcccatggtgggaaacaact-atctattcccatgctaaatgccaccatca 44407011  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 536
Target Start/End: Original strand, 45242988 - 45243037
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccat 536  Q
    |||||||||||||| ||| ||||  |||||||||||||||||| ||||||    
T  45242988 ctttcccatggtggaaaagaactcttctttcccaaattaaatggcaccat 45243037  T

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Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 504
Target Start/End: Original strand, 50305401 - 50305486
Alignment:
Q  419 agaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaa 504  Q
    |||| |||||||| || | ||||||||||| || | |  |||||||| |||||||||||| ||| || |||| |||||||||||||    
T  50305401 agaataatatagtgttcatggagtatgataagagtatgctcttcattcaatctaatggttaaaatttacttttccatggtgggaaa 50305486  T

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Target: scaffold0180 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 415 - 505
Target Start/End: Complemental strand, 22261 - 22171
Alignment:
Q  415 agggagaacaatatagtattgagggagtatgatatgactctattcttcatttaatctaatggttgaaacttgctttcccatggtgggaaaa 505  Q
    |||||||| ||| || | |||||||||||||||| || | | || ||||||||||| |||| || |||||| |||||||||||||||||||    
T  22261 agggagaaaaatctaatgttgagggagtatgataagagtgtgtttttcatttaatccaatgattaaaacttactttcccatggtgggaaaa 22171  T

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Target: scaffold0155 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 536
Target Start/End: Complemental strand, 17386 - 17337
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccat 536  Q
    |||||||||||||||||||||| |  |||| |||||||||||| ||||||    
T  17386 ctttcccatggtgggaaaaaacaagccttttccaaattaaatggcaccat 17337  T

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Target: scaffold0189 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 488 - 536
Target Start/End: Complemental strand, 12230 - 12182
Alignment:
Q  488 tttcccatggtgggaaaaaactaatctttcccaaattaaatgccaccat 536  Q
    |||| |||||||||||| ||||  |||||||||||||||| ||||||||    
T  12230 tttctcatggtgggaaacaacttctctttcccaaattaaacgccaccat 12182  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 487 - 535
Target Start/End: Original strand, 27576 - 27624
Alignment:
Q  487 ctttcccatggtgggaaaaaactaatctttcccaaattaaatgccacca 535  Q
    |||||||||||||||||||||||   |||| |||||||||||| |||||    
T  27576 ctttcccatggtgggaaaaaactctccttttccaaattaaatggcacca 27624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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