View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12822_low_13 (Length: 216)

Name: NF12822_low_13
Description: NF12822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12822_low_13
NF12822_low_13
[»] scaffold0032 (1 HSPs)
scaffold0032 (17-200)||(41885-42072)
[»] chr7 (30 HSPs)
chr7 (36-107)||(2681095-2681166)
chr7 (36-107)||(35950127-35950198)
chr7 (41-107)||(36391904-36391970)
chr7 (41-105)||(12772119-12772183)
chr7 (36-107)||(21388522-21388593)
chr7 (36-107)||(29617404-29617475)
chr7 (41-107)||(32676942-32677008)
chr7 (41-107)||(32984217-32984283)
chr7 (41-107)||(36174394-36174460)
chr7 (41-105)||(24781034-24781098)
chr7 (36-107)||(47440810-47440882)
chr7 (36-107)||(3766810-3766881)
chr7 (36-107)||(9877267-9877338)
chr7 (36-107)||(10244889-10244960)
chr7 (36-107)||(12640589-12640660)
chr7 (36-107)||(15238888-15238959)
chr7 (36-107)||(23102558-23102629)
chr7 (36-107)||(31026218-31026289)
chr7 (36-107)||(42443688-42443759)
chr7 (36-107)||(44616601-44616672)
chr7 (40-107)||(47542976-47543043)
chr7 (41-107)||(4960788-4960854)
chr7 (41-107)||(9712198-9712264)
chr7 (41-107)||(15106691-15106757)
chr7 (41-107)||(42182198-42182264)
chr7 (41-107)||(45284819-45284885)
chr7 (41-102)||(41084043-41084104)
chr7 (36-108)||(30806114-30806186)
chr7 (47-107)||(33996881-33996941)
chr7 (41-113)||(34267545-34267617)
[»] chr5 (26 HSPs)
chr5 (36-107)||(8241049-8241120)
chr5 (36-107)||(11897247-11897318)
chr5 (41-113)||(35515516-35515588)
chr5 (36-107)||(3198326-3198397)
chr5 (36-107)||(4417685-4417756)
chr5 (36-107)||(9835032-9835103)
chr5 (36-107)||(12463755-12463826)
chr5 (36-107)||(32505687-32505758)
chr5 (36-107)||(36888395-36888466)
chr5 (41-107)||(8968753-8968819)
chr5 (36-112)||(2848212-2848288)
chr5 (43-107)||(10404133-10404197)
chr5 (36-107)||(4745876-4745947)
chr5 (36-107)||(5966828-5966899)
chr5 (36-107)||(6518776-6518847)
chr5 (36-107)||(9125662-9125732)
chr5 (36-107)||(17545172-17545243)
chr5 (36-103)||(27765256-27765323)
chr5 (36-107)||(39919093-39919164)
chr5 (36-107)||(41179803-41179874)
chr5 (36-103)||(42320316-42320383)
chr5 (36-107)||(42525399-42525470)
chr5 (41-107)||(25400367-25400433)
chr5 (41-103)||(34436852-34436914)
chr5 (40-105)||(16386743-16386808)
chr5 (36-107)||(26902620-26902691)
[»] chr2 (24 HSPs)
chr2 (36-107)||(22653644-22653715)
chr2 (36-107)||(23405195-23405266)
chr2 (36-107)||(3438947-3439018)
chr2 (36-103)||(4183175-4183242)
chr2 (41-107)||(41509520-41509586)
chr2 (36-113)||(17078456-17078533)
chr2 (34-107)||(34613976-34614049)
chr2 (36-107)||(2643696-2643767)
chr2 (36-107)||(3446729-3446800)
chr2 (36-107)||(4562752-4562823)
chr2 (36-115)||(8250293-8250372)
chr2 (36-107)||(17034734-17034805)
chr2 (36-107)||(19281607-19281678)
chr2 (36-107)||(20919609-20919680)
chr2 (36-107)||(33228933-33229004)
chr2 (41-95)||(23919489-23919543)
chr2 (41-107)||(30392832-30392898)
chr2 (41-107)||(32609187-32609253)
chr2 (41-107)||(36182646-36182712)
chr2 (42-107)||(3596255-3596320)
chr2 (46-107)||(30390369-30390430)
chr2 (42-107)||(32190002-32190067)
chr2 (40-108)||(8322809-8322877)
chr2 (41-105)||(28195136-28195200)
[»] chr1 (34 HSPs)
chr1 (36-107)||(32594250-32594321)
chr1 (35-107)||(36666576-36666648)
chr1 (36-107)||(1570192-1570263)
chr1 (36-107)||(6438064-6438135)
chr1 (36-107)||(6702575-6702646)
chr1 (36-107)||(10664795-10664865)
chr1 (36-107)||(15819601-15819672)
chr1 (36-107)||(16343027-16343098)
chr1 (36-107)||(33254727-33254798)
chr1 (36-107)||(33274899-33274970)
chr1 (36-107)||(42490410-42490481)
chr1 (36-107)||(46965739-46965810)
chr1 (36-107)||(50899510-50899581)
chr1 (41-107)||(18534005-18534071)
chr1 (108-150)||(32660906-32660948)
chr1 (109-150)||(32635217-32635258)
chr1 (41-105)||(2277758-2277822)
chr1 (36-107)||(6130033-6130104)
chr1 (36-107)||(21265655-21265726)
chr1 (36-107)||(22563385-22563456)
chr1 (36-107)||(25999849-25999920)
chr1 (36-107)||(26550493-26550564)
chr1 (36-103)||(26584750-26584817)
chr1 (36-107)||(33207204-33207275)
chr1 (41-107)||(31401245-31401311)
chr1 (41-107)||(34058218-34058284)
chr1 (41-107)||(37662557-37662623)
chr1 (36-105)||(4482600-4482669)
chr1 (41-82)||(15595729-15595770)
chr1 (36-101)||(35605629-35605694)
chr1 (47-107)||(12502254-12502314)
chr1 (122-150)||(17350150-17350178)
chr1 (122-150)||(29491558-29491586)
chr1 (36-107)||(40519543-40519615)
[»] chr6 (18 HSPs)
chr6 (37-107)||(32611554-32611624)
chr6 (36-107)||(7207843-7207914)
chr6 (36-107)||(10934598-10934669)
chr6 (36-107)||(17441839-17441910)
chr6 (36-107)||(17454745-17454816)
chr6 (36-107)||(19953828-19953899)
chr6 (36-103)||(20568289-20568356)
chr6 (41-107)||(3294768-3294834)
chr6 (41-113)||(32283542-32283614)
chr6 (36-107)||(2251837-2251908)
chr6 (36-103)||(3794177-3794244)
chr6 (36-103)||(9246386-9246453)
chr6 (36-107)||(9372201-9372272)
chr6 (36-107)||(31802052-31802123)
chr6 (36-107)||(33573816-33573887)
chr6 (41-107)||(743567-743633)
chr6 (41-95)||(23610331-23610385)
chr6 (41-107)||(31935103-31935169)
[»] chr8 (43 HSPs)
chr8 (36-150)||(39164977-39165098)
chr8 (36-107)||(10736874-10736945)
chr8 (36-107)||(12770367-12770438)
chr8 (36-107)||(29716859-29716930)
chr8 (36-107)||(34413061-34413132)
chr8 (36-107)||(38219568-38219639)
chr8 (41-107)||(2787081-2787147)
chr8 (41-107)||(10200681-10200747)
chr8 (37-107)||(22274611-22274681)
chr8 (109-150)||(8402285-8402326)
chr8 (36-107)||(94511-94582)
chr8 (36-107)||(481010-481081)
chr8 (36-103)||(1937309-1937376)
chr8 (36-107)||(6280479-6280550)
chr8 (36-107)||(6659288-6659359)
chr8 (36-107)||(6739690-6739761)
chr8 (36-107)||(8265267-8265338)
chr8 (36-107)||(11231419-11231490)
chr8 (36-107)||(11875885-11875956)
chr8 (36-107)||(11890892-11890963)
chr8 (36-107)||(14876602-14876673)
chr8 (36-107)||(17698521-17698592)
chr8 (36-107)||(23178891-23178962)
chr8 (36-107)||(26567248-26567319)
chr8 (36-107)||(28909464-28909535)
chr8 (36-107)||(37717362-37717433)
chr8 (36-107)||(43283966-43284037)
chr8 (41-107)||(1632440-1632506)
chr8 (41-107)||(5332920-5332986)
chr8 (41-107)||(7194266-7194332)
chr8 (41-107)||(8953869-8953935)
chr8 (41-107)||(25890404-25890470)
chr8 (41-107)||(27077097-27077163)
chr8 (41-103)||(34158661-34158723)
chr8 (46-107)||(13647457-13647518)
chr8 (46-107)||(13747882-13747943)
chr8 (42-107)||(34266017-34266082)
chr8 (36-109)||(43656035-43656108)
chr8 (43-107)||(5328567-5328631)
chr8 (43-107)||(7797136-7797200)
chr8 (41-105)||(23435235-23435299)
chr8 (41-113)||(29260623-29260695)
chr8 (43-107)||(34894375-34894439)
[»] scaffold0445 (1 HSPs)
scaffold0445 (36-107)||(4014-4085)
[»] scaffold0024 (1 HSPs)
scaffold0024 (36-107)||(59782-59853)
[»] chr4 (31 HSPs)
chr4 (36-107)||(4958556-4958627)
chr4 (36-107)||(6371113-6371184)
chr4 (36-107)||(10417221-10417292)
chr4 (36-107)||(43147384-43147455)
chr4 (36-107)||(43596894-43596965)
chr4 (36-107)||(46105534-46105605)
chr4 (36-107)||(46775030-46775101)
chr4 (36-107)||(55251351-55251422)
chr4 (41-107)||(22230434-22230500)
chr4 (41-107)||(46206581-46206647)
chr4 (36-107)||(3847680-3847751)
chr4 (36-107)||(8965093-8965164)
chr4 (36-95)||(33933751-33933810)
chr4 (36-107)||(35219501-35219571)
chr4 (36-107)||(39023174-39023245)
chr4 (36-107)||(45112111-45112182)
chr4 (36-107)||(49901481-49901552)
chr4 (36-107)||(51890796-51890867)
chr4 (41-107)||(13578465-13578531)
chr4 (43-105)||(16975078-16975140)
chr4 (41-107)||(29406361-29406427)
chr4 (41-107)||(45139881-45139947)
chr4 (36-113)||(9761114-9761191)
chr4 (36-113)||(23705147-23705224)
chr4 (43-107)||(1458018-1458082)
chr4 (41-105)||(12504645-12504709)
chr4 (43-107)||(21935483-21935547)
chr4 (47-107)||(30057232-30057292)
chr4 (109-149)||(37677720-37677760)
chr4 (41-101)||(43978012-43978072)
chr4 (109-149)||(46206665-46206705)
[»] chr3 (43 HSPs)
chr3 (36-107)||(7920319-7920390)
chr3 (36-107)||(17218487-17218558)
chr3 (36-107)||(28689672-28689743)
chr3 (36-107)||(31327718-31327789)
chr3 (36-107)||(31528958-31529029)
chr3 (36-107)||(32144583-32144654)
chr3 (36-107)||(37800611-37800682)
chr3 (36-107)||(40548302-40548373)
chr3 (36-107)||(40933831-40933902)
chr3 (36-107)||(50496814-50496885)
chr3 (41-107)||(4139004-4139070)
chr3 (41-107)||(9176586-9176652)
chr3 (41-107)||(32776215-32776281)
chr3 (36-144)||(45118639-45118755)
chr3 (36-105)||(31327503-31327572)
chr3 (36-105)||(45701343-45701412)
chr3 (35-107)||(50234122-50234194)
chr3 (35-107)||(52309110-52309182)
chr3 (36-103)||(6919967-6920034)
chr3 (36-107)||(10176903-10176974)
chr3 (36-107)||(14795110-14795181)
chr3 (36-107)||(18194337-18194408)
chr3 (36-107)||(19996452-19996523)
chr3 (36-107)||(22472314-22472385)
chr3 (36-107)||(24303389-24303460)
chr3 (36-107)||(31586946-31587017)
chr3 (36-107)||(52974053-52974124)
chr3 (41-107)||(4227744-4227810)
chr3 (41-107)||(5326036-5326102)
chr3 (41-107)||(5636799-5636865)
chr3 (41-107)||(15975156-15975222)
chr3 (41-107)||(30779567-30779633)
chr3 (41-107)||(52984014-52984080)
chr3 (41-107)||(53577959-53578025)
chr3 (36-113)||(3748596-3748673)
chr3 (36-105)||(11820003-11820072)
chr3 (121-150)||(36407979-36408008)
chr3 (36-105)||(44651984-44652053)
chr3 (36-101)||(52945894-52945959)
chr3 (36-107)||(25883988-25884060)
chr3 (43-107)||(41936407-41936471)
chr3 (43-107)||(45647309-45647373)
chr3 (47-107)||(49447148-49447208)
[»] scaffold0366 (1 HSPs)
scaffold0366 (41-107)||(860-926)
[»] scaffold0707 (1 HSPs)
scaffold0707 (36-107)||(20-91)
[»] scaffold0519 (1 HSPs)
scaffold0519 (36-107)||(2962-3033)
[»] scaffold0128 (1 HSPs)
scaffold0128 (36-107)||(17619-17690)
[»] scaffold0088 (1 HSPs)
scaffold0088 (36-107)||(10826-10897)
[»] scaffold0608 (1 HSPs)
scaffold0608 (36-105)||(8965-9034)
[»] scaffold0460 (1 HSPs)
scaffold0460 (36-109)||(12458-12531)
[»] scaffold0187 (2 HSPs)
scaffold0187 (46-107)||(11120-11181)
scaffold0187 (46-107)||(21448-21509)
[»] scaffold0157 (1 HSPs)
scaffold0157 (41-105)||(15768-15832)


Alignment Details
Target: scaffold0032 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 17 - 200
Target Start/End: Original strand, 41885 - 42072
Alignment:
Q  17 agagataccaaacttagtcccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatttcacctt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41885 agagataccaaacttagtcccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatttcacctt 41984  T
Q  117 aggaggtgaatttctagccactaggctatttgac----nnnnnnnngagatatcaaacttacagtgagacatgtaattctatcaaact 200  Q
    |||||||||||||||||||||||||||| |||||            ||||||||||||||||||||||||||||||||||||||||||    
T  41985 aggaggtgaatttctagccactaggctacttgacaaaaaaaaaaaagagatatcaaacttacagtgagacatgtaattctatcaaact 42072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 2681095 - 2681166
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  2681095 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggaca 2681166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 35950127 - 35950198
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  35950127 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggaca 35950198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 36391970 - 36391904
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  36391970 tgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggaca 36391904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 12772119 - 12772183
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||    
T  12772119 tgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccgga 12772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 21388522 - 21388593
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||| ||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  21388522 ccccatgagcgtagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 21388593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 29617404 - 29617475
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  29617404 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 29617475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 32677008 - 32676942
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  32677008 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 32676942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 32984283 - 32984217
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | ||||| || |||||||||||| |||||||||||    
T  32984283 tgagcttagctcagttggtagggatattgcatattatatacaggagtcggggttcaaaccccggaca 32984217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 36174394 - 36174460
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  36174394 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 36174460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 24781034 - 24781098
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||    
T  24781034 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccgga 24781098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 47440882 - 47440810
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggc-attgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||||||||||||| | | | |||| |||||||||| | |||||||||| ||||| |||||    
T  47440882 ccccatgagcttagctcagttggtagggacaaatgcataatatatgcaggggtcggggttcgaaccctggaca 47440810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 3766810 - 3766881
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||||||| |||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  3766810 ccccgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 3766881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 9877338 - 9877267
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  9877338 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 9877267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 10244960 - 10244889
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||| | ||| |||||||| |||||||||||    
T  10244960 ccccgtgagcttagctcagttggtagggatattgcatattatatgtaggagccggggttcgaaccccggaca 10244889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 12640660 - 12640589
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||| ||||    
T  12640660 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccagaca 12640589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 15238888 - 15238959
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  15238888 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 15238959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 23102629 - 23102558
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  23102629 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 23102558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 31026218 - 31026289
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||| ||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  31026218 ccccgtgagcgtagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 31026289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 42443688 - 42443759
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| || ||||||||    
T  42443688 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaatcccggaca 42443759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 44616601 - 44616672
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| || ||||||||    
T  44616601 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcaaaacccggaca 44616672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 47543043 - 47542976
Alignment:
Q  40 atgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||||||||| ||||||||| ||| |||||| | | | |||||| || ||||||||    
T  47543043 atgagcttagctcagttggtaggggcattgcataatttatgcaggggccagggttcgaatcccggaca 47542976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 4960788 - 4960854
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||| |||| |  |||||| | |||||||| |||||||||||| |||||| ||||    
T  4960788 tgagcttagctcagttagtagggatattgcatattatatgcaggagtcggggttcgaacccctgaca 4960854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 9712264 - 9712198
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||| |||||||||||| |  |||||| | |||||||| | |||||||||| |||||||||||    
T  9712264 tgagcttaactcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccccggaca 9712198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 15106757 - 15106691
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||| |||||||||||| |  |||||| | |||||||| |||||||||||| |||||| ||||    
T  15106757 tgagcttaactcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccagaca 15106691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 42182264 - 42182198
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||| |||||||||||| || |||||| | |||||||| | |||||||||| ||| |||||||    
T  42182264 tgagcttaactcagttggtaggggtattgcatattatatgcaggggtcggggttcgaactccggaca 42182198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 45284885 - 45284819
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||| ||| | ||||| | ||| |||||| | |||||||||| |||||||||||    
T  45284885 tgagcttagctcagttgatagggacattgaataatttatgcaggggtcggggttcgaaccccggaca 45284819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 41084043 - 41084104
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaacccc 102  Q
    ||||||||||||||||||||| |  |||||| | |||||||| | |||||||||| ||||||    
T  41084043 tgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaacccc 41084104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 30806114 - 30806186
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacat 108  Q
    |||| |||| |||||||||||||||| |  |||||| | |||||||| | ||||| |||| ||||||||||||    
T  30806114 ccccgtgagtttagctcagttggtagggatattgcatattatatgcaggggtcggagttcgaaccccggacat 30806186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 33996941 - 33996881
Alignment:
Q  47 tagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||| |  |||||| | |||||||| |||||||||||| ||||| |||||    
T  33996941 tagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccctggaca 33996881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 34267617 - 34267545
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatttcac 113  Q
    |||||||||||||||||||||    |||||| | |||||||| |||  ||||||| ||||||||||| |||||    
T  34267617 tgagcttagctcagttggtaggaatattgcatattatatgcaggagctggggttcgaaccccggacacttcac 34267545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 8241049 - 8241120
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||||||||||||| |  |||||| | |||||||| | |||||||||| |||||||||||    
T  8241049 ccccatgagcttagctcagttggtagggatattgcatattatatgcaagggtcggggttcgaaccccggaca 8241120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 11897247 - 11897318
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  11897247 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggaca 11897318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 35515516 - 35515588
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatttcac 113  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| ||||||||||| |||||    
T  35515516 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacacttcac 35515588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 3198326 - 3198397
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| | ||||||| |||||||||| | || | ||||| |||||||||||    
T  3198326 ccccgtgagcttagctcagttggtagggacattgcataatatatgcaggggttgaggttcgaaccccggaca 3198397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 4417756 - 4417685
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  4417756 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 4417685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 9835032 - 9835103
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  9835032 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 9835103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 12463755 - 12463826
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  12463755 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 12463826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 32505687 - 32505758
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  32505687 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 32505758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 36888466 - 36888395
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||| ||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  36888466 ccccgtgagcttagttcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggaca 36888395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 8968753 - 8968819
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  8968753 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 8968819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 2848212 - 2848288
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatttca 112  Q
    |||| ||||||||||||||||||||| |  |||| | | |||||||||||| |||||||| ||||||| ||| ||||    
T  2848212 ccccgtgagcttagctcagttggtagggatattgtatattatatgcatgaggcggggttcgaaccccgcacacttca 2848288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 10404133 - 10404197
Alignment:
Q  43 agcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||||||    |||||| | |||||||| |||||||||||| |||||||||||    
T  10404133 agcttagctcagttggtaggaatattgcatattatatgcaggagtcggggttcgaaccccggaca 10404197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 4745947 - 4745876
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||| | ||| |||||||| |||||||||||    
T  4745947 ccccgtgagcttagctcagttggtagggatattgcatattatatgaaggagccggggttcgaaccccggaca 4745876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 5966828 - 5966899
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||| ||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  5966828 ccccgtgagcgtagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 5966899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 6518847 - 6518776
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||  ||||||| |||||||||||    
T  6518847 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccggaca 6518776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 9125662 - 9125732
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||||||||||||||||||||||  |||||| | |||||||| | | |||||||| |||||||||||    
T  9125662 ccccgtgagcttagctcagttggtagcgatattgcatattatatgca-gggccggggttcgaaccccggaca 9125732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 17545243 - 17545172
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  17545243 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 17545172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 27765256 - 27765323
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccg 103  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||    
T  27765256 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaaccccg 27765323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 39919164 - 39919093
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||| ||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  39919164 ccccgtgagcttagcttagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 39919093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 41179874 - 41179803
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| || ||||||||    
T  41179874 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaatcccggaca 41179803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 42320316 - 42320383
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccg 103  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||||||| |||| |||||||    
T  42320316 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcggagttcgaaccccg 42320383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 42525399 - 42525470
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||| |||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  42525399 ccccgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 42525470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 25400433 - 25400367
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||| ||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  25400433 tgagcatagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 25400367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 34436852 - 34436914
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccg 103  Q
    ||||||||||||||||||||| | || |||| |||||||||| | | |||||||| |||||||    
T  34436852 tgagcttagctcagttggtagggacaatgcataatatatgcaagggccggggttcaaaccccg 34436914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 16386808 - 16386743
Alignment:
Q  40 atgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    |||||||||||||||||||||| |  |||||| | |||||||| |||  ||||||| |||||||||    
T  16386808 atgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccgga 16386743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 26902620 - 26902691
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggc-attgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||||| | | |||| ||| |||||| | |||||||||| |||||||||||    
T  26902620 ccccgtgagcttagctcagttggtagcgacaaatgcataat-tatgcaggggtcggggttcgaaccccggaca 26902691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 22653715 - 22653644
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  22653715 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggaca 22653644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 23405195 - 23405266
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| | ||||||| |||||||||| | |||||||||| ||||| |||||    
T  23405195 ccccgtgagcttagctcagttggtagggacattgcataatatatgcaggggtcggggttcgaaccctggaca 23405266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 3438947 - 3439018
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||| ||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  3438947 ccccgtgagcgtagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggaca 3439018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 4183175 - 4183242
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccg 103  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||||    
T  4183175 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccg 4183242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 41509520 - 41509586
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  41509520 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 41509586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 17078456 - 17078533
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatttcac 113  Q
    |||| ||||||||||||||||||||| |  |||| | | |||||||| |||||||||||| || |||||||| |||||    
T  17078456 ccccgtgagcttagctcagttggtagggatattgtatattatatgcaggagtcggggttcgaatcccggacacttcac 17078533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 34613976 - 34614049
Alignment:
Q  34 tcccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  34613976 tcccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 34614049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 2643696 - 2643767
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||| ||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  2643696 ccccgtgagcatagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 2643767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 3446729 - 3446800
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| || ||||| |||||||||||    
T  3446729 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccgaggttcgaaccccggaca 3446800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 4562823 - 4562752
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||| |||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  4562823 ccccgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 4562752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 8250372 - 8250293
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatttcacct 115  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||| |||| |||||||    
T  8250372 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccagacacttcacct 8250293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 17034734 - 17034805
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||| ||||||| |  |||||| | |||||||| |||||||||||| || ||||||||    
T  17034734 ccccgtgagcttagctcaattggtagggatattgcatattatatgcaggagtcggggttcgaatcccggaca 17034805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 19281607 - 19281678
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||  ||||||| |||||||||||    
T  19281607 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccggaca 19281678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 20919609 - 20919680
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| | ||||||| ||| |||||  | | |||||||| |||||||||||    
T  20919609 ccccgtgagcttagctcagttggtagggacattgcataatttatgctggggccggggttcgaaccccggaca 20919680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 33229004 - 33228933
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  33229004 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 33228933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 23919543 - 23919489
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttc 95  Q
    ||||||||||||||||||||| | ||||||| |||||||| | | ||||||||||    
T  23919543 tgagcttagctcagttggtagggacattgcataatatatggaggggtcggggttc 23919489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 30392898 - 30392832
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||| | |||||||||||| |||||| ||||    
T  30392898 tgagcttagctcagttggtagggatattgcatattatatgtaggagtcggggttcgaaccccagaca 30392832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 32609253 - 32609187
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||| |||||||||||| |  |||||| | |||||||| |||||||||||| ||| |||||||    
T  32609253 tgagcttaactcagttggtagggatattgcatattatatgcaagagtcggggttcgaactccggaca 32609187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 36182646 - 36182712
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| |||  ||||||| |||||||||||    
T  36182646 tgagcttagctcagttggtagggatattgcatattatatgcaggagcaggggttcgaaccccggaca 36182712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 3596255 - 3596320
Alignment:
Q  42 gagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||| |||||| || | ||||||| ||| |||||| | |||||||||| |||||||||||    
T  3596255 gagcttagcttagttggcagagacattgcataatttatgcaggggtcggggttcgaaccccggaca 3596320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 30390430 - 30390369
Alignment:
Q  46 ttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  30390430 ttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 30390369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 32190067 - 32190002
Alignment:
Q  42 gagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||| ||||||||||| | ||||||| ||| |||||| | | |||||||| |||||||||||    
T  32190067 gagcttagttcagttggtagggacattgcataatttatgcaggggccggggttcgaaccccggaca 32190002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 8322809 - 8322877
Alignment:
Q  40 atgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacat 108  Q
    |||||||||| ||||||||||| || |||||| | ||||| || | |||||||||| ||||| ||||||    
T  8322809 atgagcttagttcagttggtaggggtattgcatattatatacaggggtcggggttcgaaccctggacat 8322877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 28195200 - 28195136
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    ||||||||||||||||||||| |  |||||| | |||||||| | |  |||||||||||||||||    
T  28195200 tgagcttagctcagttggtagggatattgcatattatatgcaagggcaggggttctaaccccgga 28195136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 32594250 - 32594321
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  32594250 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggaca 32594321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 36666648 - 36666576
Alignment:
Q  35 cccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||| ||||||||||||||||||||| | ||||||| ||| |||||| | | |||||||| |||||||||||    
T  36666648 cccccgtgagcttagctcagttggtagggacattgcataatttatgcaggggccggggttcgaaccccggaca 36666576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 1570263 - 1570192
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  1570263 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 1570192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 6438135 - 6438064
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  6438135 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 6438064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 6702575 - 6702646
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||| ||||    
T  6702575 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccagaca 6702646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 10664865 - 10664795
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  10664865 ccccgtgagcttagctcagttggtagggatattgcatattatatgca-gagtcggggttcgaaccccggaca 10664795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 15819672 - 15819601
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  15819672 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 15819601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 16343027 - 16343098
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  16343027 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 16343098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 33254727 - 33254798
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||  |||||||||||    
T  33254727 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttggaaccccggaca 33254798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 33274899 - 33274970
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||  |||||||||||    
T  33274899 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttggaaccccggaca 33274970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 42490481 - 42490410
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | |||||||||| |||||||||||    
T  42490481 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccccggaca 42490410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 46965739 - 46965810
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  46965739 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 46965810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 50899581 - 50899510
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  50899581 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 50899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 18534005 - 18534071
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||| | |||||||||||| |||||||||||    
T  18534005 tgagcttagctcagttggtagagatattgcatattatatgtaggagtcggggttcgaaccccggaca 18534071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 32660906 - 32660948
Alignment:
Q  108 tttcaccttaggaggtgaatttctagccactaggctatttgac 150  Q
    |||||||||| |||||||||||||||||||||||||| |||||    
T  32660906 tttcaccttaagaggtgaatttctagccactaggctacttgac 32660948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 32635217 - 32635258
Alignment:
Q  109 ttcaccttaggaggtgaatttctagccactaggctatttgac 150  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  32635217 ttcaccttaagaggtgaatttctagccactaggctacttgac 32635258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 2277758 - 2277822
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||    
T  2277758 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccgga 2277822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 6130104 - 6130033
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||| ||||||||||||||| |  |||||| | |||||||| |||||||||||| ||| |||||||    
T  6130104 ccccgtgagcgtagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaactccggaca 6130033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 21265655 - 21265726
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  21265655 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 21265726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 22563385 - 22563456
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  22563385 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 22563456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 25999849 - 25999920
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||  ||||||| |||||||||||    
T  25999849 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccggaca 25999920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 26550493 - 26550564
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||||||| |||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  26550493 ccccgtgagcttaactcagttggtagggatattgcatactatatgcaggagccggggttcgaaccccggaca 26550564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 26584817 - 26584750
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccg 103  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||    
T  26584817 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaaccccg 26584750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 33207204 - 33207275
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  33207204 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 33207275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 31401311 - 31401245
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||| ||| | ||||||| ||| |||||| ||| || ||||| |||||||||||    
T  31401311 tgagcttagctcagttgatagggacattgcataatttatgcaggagccgaggttcaaaccccggaca 31401245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 34058218 - 34058284
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| || ||||| |||||||||||    
T  34058218 tgagcttagctcagttggtagggatattgcatattatatgcaggagccgaggttcgaaccccggaca 34058284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 37662623 - 37662557
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| | |||||||| | |||||||||||    
T  37662623 tgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggtacgaaccccggaca 37662557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 4482669 - 4482600
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| ||| |||| |||||||||    
T  4482669 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggagttcgaaccccgga 4482600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 15595729 - 15595770
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgca 82  Q
    ||||||||||||||||||||| | ||||||| ||||||||||    
T  15595729 tgagcttagctcagttggtagggacattgcataatatatgca 15595770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 35605694 - 35605629
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccc 101  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | |||||||||| |||||    
T  35605694 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccc 35605629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 12502314 - 12502254
Alignment:
Q  47 tagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||| |  |||||| | |||||||| |||||||||||| || ||||||||    
T  12502314 tagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaacccggaca 12502254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 17350150 - 17350178
Alignment:
Q  122 gtgaatttctagccactaggctatttgac 150  Q
    |||||||||||||||||||||||||||||    
T  17350150 gtgaatttctagccactaggctatttgac 17350178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 29491558 - 29491586
Alignment:
Q  122 gtgaatttctagccactaggctatttgac 150  Q
    |||||||||||||||||||||||||||||    
T  29491558 gtgaatttctagccactaggctatttgac 29491586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 40519615 - 40519543
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtc-ggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| | ||||||| |||||||||||    
T  40519615 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccgggggttcgaaccccggaca 40519543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 32611624 - 32611554
Alignment:
Q  37 cccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  32611624 cccatgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 32611554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 7207843 - 7207914
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  7207843 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 7207914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 10934598 - 10934669
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  10934598 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 10934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 17441910 - 17441839
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  17441910 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 17441839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 17454816 - 17454745
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||||||| |||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  17454816 ccccgtgagcttatctcagttggtagagatattgcatattatatgcaggagtcggggttcgaaccccggaca 17454745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 19953899 - 19953828
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  19953899 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 19953828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 20568356 - 20568289
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccg 103  Q
    |||| ||||||||||||||||||||  | ||||||| |||||||||| | |||||||||| |||||||    
T  20568356 ccccgtgagcttagctcagttggtaaggacattgcataatatatgcaggggtcggggttcgaaccccg 20568289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 3294768 - 3294834
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| | |||||||||| |||||||||||    
T  3294768 tgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccccggaca 3294834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 32283542 - 32283614
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatttcac 113  Q
    ||||||||||||| ||||||| | ||||||| ||| |||||| | |||||||||| |||||| |||| |||||    
T  32283542 tgagcttagctcaattggtagggacattgcataatttatgcaagggtcggggttcgaaccccagacacttcac 32283614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 2251837 - 2251908
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  2251837 ccccgtgagcttagctcagttggtagggatattgcatactatatgcaggggccggggttcgaaccccggaca 2251908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 3794244 - 3794177
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccg 103  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||    
T  3794244 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaaccccg 3794177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 9246453 - 9246386
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccg 103  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||    
T  9246453 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaaccccg 9246386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 9372272 - 9372201
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | |||||||||| ||||| |||||    
T  9372272 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccctggaca 9372201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 31802052 - 31802123
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||||||| |||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  31802052 ccccgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 31802123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 33573816 - 33573887
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| ||||| |||||    
T  33573816 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccctggaca 33573887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 743567 - 743633
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | || ||||| ||| |||||||| |||||||||||    
T  743567 tgagcttagctcagttggtagggatattgcatattagatgcaggagccggggttcgaaccccggaca 743633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 23610385 - 23610331
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttc 95  Q
    ||||||||||||||||||||| | ||||||| ||| |||||| | ||||||||||    
T  23610385 tgagcttagctcagttggtagggacattgcataatttatgcaggggtcggggttc 23610331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 31935103 - 31935169
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  ||||||   |||||||| | |||||||||| |||||||||||    
T  31935103 tgagcttagctcagttggtagggatattgcattttatatgcaggggtcggggttcgaaccccggaca 31935169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 39164977 - 39165098
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacat--------ttcaccttaggaggtgaat 127  Q
    |||||||||||||||||||||||||| | ||||||| || ||||||| | | |||| ||| ||| |||||||         ||||||||| |||||||||    
T  39164977 ccccatgagcttagctcagttggtagagacattgcataacatatgcaagggccggg-ttcgaacaccggacaccccacttattcaccttaagaggtgaat 39165075  T
Q  128 ttctagccactaggctatttgac 150  Q
    ||||||||||||||||| |||||    
T  39165076 ttctagccactaggctacttgac 39165098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 10736945 - 10736874
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  10736945 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 10736874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 12770367 - 12770438
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||||||||| ||| | ||||||| ||| |||||| | | |||||||| |||||||||||    
T  12770367 ccccatgagcttagctcagttgatagggacattgcataatttatgcaggggccggggttcgaaccccggaca 12770438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 29716859 - 29716930
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  29716859 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 29716930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 34413061 - 34413132
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  34413061 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 34413132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 38219639 - 38219568
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||| ||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  38219639 ccccgtgagcatagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggaca 38219568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 2787147 - 2787081
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  2787147 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 2787081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 10200747 - 10200681
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  10200747 tgagcttagctcagttggtagagatattgcatattatatgcaggagccggggttcgaaccccggaca 10200681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 22274681 - 22274611
Alignment:
Q  37 cccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||| |||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  22274681 cccatgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 22274611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 8402326 - 8402285
Alignment:
Q  109 ttcaccttaggaggtgaatttctagccactaggctatttgac 150  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  8402326 ttcaccttaagaggtgaatttctagccactaggctacttgac 8402285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 94582 - 94511
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| ||| |||| |||||||||||    
T  94582 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggagttcgaaccccggaca 94511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 481010 - 481081
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| | ||||||| ||| |||||| | | || ||||| |||||||||||    
T  481010 ccccgtgagcttagctcagttggtagggacattgcataatttatgcaggggccgcggttcgaaccccggaca 481081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 1937309 - 1937376
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccg 103  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||    
T  1937309 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaaccccg 1937376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 6280479 - 6280550
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||| | | |||||||| ||| |||||||| |||||||||||    
T  6280479 ccccgtgagcttagctcagttggtagggatattgaatattatatgcaggagccggggttcgaaccccggaca 6280550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 6659288 - 6659359
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||| |||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  6659288 ccccgtgagattagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 6659359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 6739690 - 6739761
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||| |||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  6739690 ccccgtgagattagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 6739761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 8265267 - 8265338
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | ||| |||||| |||||||||||    
T  8265267 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggtcagggttcgaaccccggaca 8265338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 11231419 - 11231490
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||||  || | ||||||| ||| |||||| | | |||||||| |||||||||||    
T  11231419 ccccatgagcttagctcagttgaaagggacattgcataatttatgcaggggccggggttcgaaccccggaca 11231490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 11875885 - 11875956
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||  ||||||| |||||||||||    
T  11875885 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccggaca 11875956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 11890892 - 11890963
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||  ||||||| |||||||||||    
T  11890892 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccggaca 11890963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 14876673 - 14876602
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||| ||||||    
T  14876673 ccccgtgagcttagctcagttggtagggaaattgcatattatatgcaggagccggggttcgaacctcggaca 14876602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 17698521 - 17698592
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| || ||||||||    
T  17698521 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaatcccggaca 17698592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 23178962 - 23178891
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  23178962 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 23178891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 26567319 - 26567248
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||| ||| |  |||||| | |||||||| |||||||| ||| |||||||||||    
T  26567319 ccccgtgagcttagctcagttgatagggatattgcatattatatgcaggagtcgggattcgaaccccggaca 26567248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 28909464 - 28909535
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | || ||||| ||| |||||||| |||||||||||    
T  28909464 ccccgtgagcttagctcagttggtagggatattgcatattacatgcaggagccggggttcgaaccccggaca 28909535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 37717362 - 37717433
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||||||| |||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  37717362 ccccgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 37717433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 43284037 - 43283966
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||| |||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  43284037 ccccgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 43283966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 1632506 - 1632440
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||||||||    ||| || | |||||||| |||||||||||| |||||||||||    
T  1632506 tgagcttagctcagttggtaggaatattacatattatatgcaggagtcggggttcgaaccccggaca 1632440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 5332920 - 5332986
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||  | | |||||||| |||||||||||| |||||||||||    
T  5332920 tgagcttagctcagttggtagagatattatatattatatgcaggagtcggggttcgaaccccggaca 5332986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 7194266 - 7194332
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||| ||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  7194266 tgagcttagttcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 7194332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 8953935 - 8953869
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||| | |||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  8953935 tgagcttaacacagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggaca 8953869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 25890470 - 25890404
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||| ||||||||| | ||||||| ||| |||||| | | |||||||| |||||||||||    
T  25890470 tgagcttagcttagttggtagggacattgcataatttatgcaagggccggggttcgaaccccggaca 25890404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 27077163 - 27077097
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| | |||||||||| || ||||||||    
T  27077163 tgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaatcccggaca 27077097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 34158723 - 34158661
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccg 103  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||    
T  34158723 tgagcttagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaaccccg 34158661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 13647518 - 13647457
Alignment:
Q  46 ttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||| |  |||||| | |||||||| |||||| ||||| |||||||||||    
T  13647518 ttagctcagttggtagagatattgcatattatatgcaggagtcgtggttcgaaccccggaca 13647457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 13747943 - 13747882
Alignment:
Q  46 ttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||| |  |||||| | |||||||| |||||| ||||| |||||||||||    
T  13747943 ttagctcagttggtagagatattgcatattatatgcaggagtcgtggttcgaaccccggaca 13747882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 107
Target Start/End: Original strand, 34266017 - 34266082
Alignment:
Q  42 gagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||||||| |  |||||| | |||||||| |||| ||||||| |||| ||||||    
T  34266017 gagcttagctcagttggtagggatattgcatattatatgcaggagttggggttcgaacctcggaca 34266082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 43656035 - 43656108
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatt 109  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||| | | |||||||||| |||| ||||||||    
T  43656035 ccccgtgagcttagctcagttggtagggatattgcatattatatgtaggggtcggggttcgaacctcggacatt 43656108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 5328631 - 5328567
Alignment:
Q  43 agcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  5328631 agcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 5328567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 7797136 - 7797200
Alignment:
Q  43 agcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||| |  |||| | | |||||||| ||| |||||||| |||||||||||    
T  7797136 agcttagctcagttggtagggatattgaatattatatgcaggagccggggttcgaaccccggaca 7797200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 23435299 - 23435235
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    ||||||||||||||||| ||| |  |||||| | |||||||| ||| |||||||| |||||||||    
T  23435299 tgagcttagctcagttgatagggatattgcatattatatgcaggagccggggttcgaaccccgga 23435235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 29260623 - 29260695
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatttcac 113  Q
    |||||||| ||||| |||||| |  |||||| | |||||||| ||||||||| || ||||||||||| |||||    
T  29260623 tgagcttaactcagctggtagggatattgcatattatatgcaggagtcggggctcgaaccccggacacttcac 29260695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 34894375 - 34894439
Alignment:
Q  43 agcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  34894375 agcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 34894439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 4085 - 4014
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||| ||||    
T  4085 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccagaca 4014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 59782 - 59853
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  59782 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 59853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 4958627 - 4958556
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||| ||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  4958627 ccccgtgagcttagttcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggaca 4958556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 6371113 - 6371184
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  6371113 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 6371184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 10417292 - 10417221
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||||||||||||| |  ||| || | |||||||| ||||| |||||| |||||||||||    
T  10417292 ccccatgagcttagctcagttggtagggatattacatattatatgcaggagtcagggttcgaaccccggaca 10417221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 43147455 - 43147384
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  43147455 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 43147384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 43596894 - 43596965
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  43596894 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 43596965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 46105534 - 46105605
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  46105534 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 46105605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 46775101 - 46775030
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  46775101 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 46775030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 55251422 - 55251351
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  55251422 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 55251351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 22230500 - 22230434
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  22230500 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 22230434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 46206581 - 46206647
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| | |||||||  ||||||||| | |||||| ||| |||||||||||    
T  46206581 tgagcttagctcagttggtagggacattgcattatatatgcaggggtcgggattcgaaccccggaca 46206647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 3847680 - 3847751
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| | |||||||||    
T  3847680 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgatccccggaca 3847751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 8965093 - 8965164
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  8965093 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 8965164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 33933810 - 33933751
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttc 95  Q
    |||| ||||||||||||||||||||| | ||||||| |||||||||| | | ||||||||    
T  33933810 ccccgtgagcttagctcagttggtagggacattgcataatatatgcaggggccggggttc 33933751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 35219571 - 35219501
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | || ||||| |||||||||||| |||||||||||    
T  35219571 ccccgtgagcttagctcagttggtagggatattgcatatta-atgcaggagtcggggttcgaaccccggaca 35219501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 39023174 - 39023245
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | |||||||||| ||||| |||||    
T  39023174 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccctggaca 39023245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 45112182 - 45112111
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||||||| |||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  45112182 ccccgtgagcttacctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 45112111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 49901481 - 49901552
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  49901481 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 49901552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 51890796 - 51890867
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||||||||||||||||| || | ||||||| ||| |||||| | | |||||||| |||||||||||    
T  51890796 ccccgtgagcttagctcagttggcagggacattgcataatttatgcaggggccggggttcgaaccccggaca 51890867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 13578531 - 13578465
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||| |||||||||||| |  |||||| | |||||||| | |||||||||| |||||||||||    
T  13578531 tgagcttaactcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccccggaca 13578465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 16975078 - 16975140
Alignment:
Q  43 agcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    ||||||||||| ||||||| | ||||||| ||| |||||||| ||| |||||| |||||||||    
T  16975078 agcttagctcaattggtagggacattgcataatttatgcatgggtcagggttcgaaccccgga 16975140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 29406361 - 29406427
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||| ||||||| | ||||||| ||| |||||| | |||||||||| ||| |||||||    
T  29406361 tgagcttagctcaattggtagggacattgcataatttatgcaggggtcggggttcgaactccggaca 29406427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 45139947 - 45139881
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| | ||||| | ||| |||||| | | |||||||| |||||||||||    
T  45139947 tgagcttagctcagttggtagggacattgtataatttatgcaggggccggggttcgaaccccggaca 45139881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 9761114 - 9761191
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatttcac 113  Q
    |||| |||||||| |||||||||||| |  |||||| | |||||||| |||  ||||||| ||||||||||| |||||    
T  9761114 ccccgtgagcttacctcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccggacacttcac 9761191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 23705224 - 23705147
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatttcac 113  Q
    |||| ||||||||||||||||||||| |  |||||| | || ||||| |||  ||||||| ||||||||||| |||||    
T  23705224 ccccgtgagcttagctcagttggtagggatattgcatattacatgcaggagctggggttcgaaccccggacacttcac 23705147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 1458082 - 1458018
Alignment:
Q  43 agcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||| ||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  1458082 agcttagctcagttgatagggatattgcatattatatgcaggagccggggttcgaaccccggaca 1458018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 12504709 - 12504645
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    |||||||| |||||||||||| |  |||||| | |||||||| |||||| ||||| |||||||||    
T  12504709 tgagcttatctcagttggtagggatattgcatattatatgcaggagtcgaggttcgaaccccgga 12504645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 21935483 - 21935547
Alignment:
Q  43 agcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  21935483 agcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 21935547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 30057232 - 30057292
Alignment:
Q  47 tagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||| |  |||||| | |||||||| | |||||||||| |||||||||||    
T  30057232 tagctcagttggtagggatattgcatattatatgcaggggtcggggttcaaaccccggaca 30057292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 37677720 - 37677760
Alignment:
Q  109 ttcaccttaggaggtgaatttctagccactaggctatttga 149  Q
    ||||||||| | |||||| ||||||||||||||||||||||    
T  37677720 ttcaccttaaggggtgaacttctagccactaggctatttga 37677760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 43978012 - 43978072
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccc 101  Q
    ||||||||||||||||||||| |  |||||| | |||||||| | |||||||||| |||||    
T  43978012 tgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccc 43978072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 46206665 - 46206705
Alignment:
Q  109 ttcaccttaggaggtgaatttctagccactaggctatttga 149  Q
    ||||||||| ||||||||||||||||||||| |||| ||||    
T  46206665 ttcaccttaagaggtgaatttctagccactatgctacttga 46206705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 7920319 - 7920390
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  7920319 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaagagccggggttcgaaccccggaca 7920390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 17218487 - 17218558
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  17218487 ccccatgagcttagctcagttggtagggatattgcatattatatgcaagggccggggttcaaaccccggaca 17218558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 28689743 - 28689672
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||| ||||||||||||||||| |  |||||| | |||||||| |||||||||||| |||||||||||    
T  28689743 ccccgtgaacttagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggaca 28689672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 31327789 - 31327718
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  31327789 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 31327718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 31529029 - 31528958
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||| | | |||||||| |||||||||||| |||||||||||    
T  31529029 ccccgtgagcttagctcagttggtagggatattgaatattatatgcaggagtcggggttcgaaccccggaca 31528958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 32144583 - 32144654
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||| ||||||||| || |||||| | |||||||| ||| |||||||| |||||||||||    
T  32144583 ccccgtgagcttagcttagttggtaggggtattgcatattatatgcaggagccggggttcgaaccccggaca 32144654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 37800682 - 37800611
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  37800682 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 37800611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 40548302 - 40548373
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  40548302 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 40548373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 40933902 - 40933831
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  40933902 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 40933831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 50496885 - 50496814
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  50496885 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 50496814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 4139004 - 4139070
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  4139004 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 4139070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 9176652 - 9176586
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  9176652 tgagcttagctcagttggtagggatattgcatattatatgcaagagccggggttcgaaccccggaca 9176586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 32776215 - 32776281
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| | ||||||| ||| |||||| | | |||||||| |||||||||||    
T  32776215 tgagcttagctcagttggtagggacattgcataatttatgcaggggccggggttcgaaccccggaca 32776281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 144
Target Start/End: Original strand, 45118639 - 45118755
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga-----ca---tttcaccttaggaggtgaat 127  Q
    |||||||||||||||||||||||||| | |||||||  ||||||||| | | |||||||| ||||| |||     ||    ||||| ||| |||||||||    
T  45118639 ccccatgagcttagctcagttggtagggacattgcattatatatgcaggggccggggttcgaacccgggattccccacttattcactttaagaggtgaat 45118738  T
Q  128 ttctagccactaggcta 144  Q
    |||||||||||||||||    
T  45118739 ttctagccactaggcta 45118755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 31327572 - 31327503
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||    
T  31327572 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccgga 31327503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 45701343 - 45701412
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||    
T  45701343 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccgga 45701412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 50234122 - 50234194
Alignment:
Q  35 cccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||| |||||||| |||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  50234122 cccccgtgagcttacctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 50234194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 52309182 - 52309110
Alignment:
Q  35 cccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||| |||||||| |||||||||||| |  |||||| | |||||||| |||||||||||| |||||| ||||    
T  52309182 cccccgtgagcttaactcagttggtagggatattgcatactatatgcaggagtcggggttcgaaccccagaca 52309110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 6920034 - 6919967
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccg 103  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||    
T  6920034 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccg 6919967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 10176974 - 10176903
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||| |||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  10176974 ccccgtgaggttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 10176903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 14795110 - 14795181
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||| ||||||||| | ||||||| |||||||||| | | | |||||| |||||||||||    
T  14795110 ccccgtgagcttagcttagttggtagtgacattgcataatatatgcaggtgccagggttcaaaccccggaca 14795181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 18194337 - 18194408
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||| |||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  18194337 ccccgtgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 18194408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 19996523 - 19996452
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||| ||||||||||||||| |  |||||| | |||||||| |||| ||||||| |||||||||||    
T  19996523 ccccgtgagcgtagctcagttggtagggatattgcatattatatgcaggagttggggttcgaaccccggaca 19996452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 22472385 - 22472314
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||||||| |||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  22472385 ccccgtgagcttaactcagttggtagagatattgcatattatatgcaagagccggggttcgaaccccggaca 22472314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 24303389 - 24303460
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||||||||||||||||| || | ||||||| ||| |||||| | | |||||||| |||||||||||    
T  24303389 ccccgtgagcttagctcagttggcagggacattgcataatttatgcaggggccggggttcgaaccccggaca 24303460  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 31586946 - 31587017
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||||||||||||| |  |||||| | |||||||| | ||||| |||| || ||||||||    
T  31586946 ccccatgagcttagctcagttggtagggatattgcatattatatgcaggggtcggagttcgaatcccggaca 31587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 52974124 - 52974053
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||||||| |||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  52974124 ccccgtgagcttaactcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 52974053  T

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Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 4227810 - 4227744
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| |||||||||||||||| | ||||||| ||| |||||| | |||||||||| ||| |||||||    
T  4227810 tgagtttagctcagttggtagggacattgcataatttatgcaggggtcggggttcgaactccggaca 4227744  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 5326102 - 5326036
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||||||||||  |||||| | || |||||||||   |||||| |||||||||||    
T  5326102 tgagcttagctcagttggtagcgatattgcatattacatgcatgagcaagggttcgaaccccggaca 5326036  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 5636865 - 5636799
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| ||||| |||||    
T  5636865 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccctggaca 5636799  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 15975156 - 15975222
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||| ||||||    
T  15975156 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaacctcggaca 15975222  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 30779633 - 30779567
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| | |||||||||| ||||| |||||    
T  30779633 tgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccctggaca 30779567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 52984014 - 52984080
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | | |||||| | |||||||||| |||||||||||    
T  52984014 tgagcttagctcagttggtagggatattgcatattgtatgcaagggtcggggttcgaaccccggaca 52984080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 53577959 - 53578025
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |   ||||| | |||||||| ||| |||||||| |||||||||||    
T  53577959 tgagcttagctcagttggtagggatgttgcatattatatgcaagagccggggttcgaaccccggaca 53578025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 3748673 - 3748596
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatttcac 113  Q
    |||| ||||||||||||||||||||| |  |||| | | |||||||| | || ||||||| |||||||||||| ||||    
T  3748673 ccccgtgagcttagctcagttggtagggatattgtatattatatgcaggggttggggttcgaaccccggacatctcac 3748596  T

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Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 11820003 - 11820072
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    |||| ||||||||||||||||||||| |  ||||||   |||||| | |||||||||||| |||||||||    
T  11820003 ccccgtgagcttagctcagttggtagggatattgcatgttatatgtaggagtcggggttcgaaccccgga 11820072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 36408008 - 36407979
Alignment:
Q  121 ggtgaatttctagccactaggctatttgac 150  Q
    ||||||||||||||||||||||||||||||    
T  36408008 ggtgaatttctagccactaggctatttgac 36407979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 44652053 - 44651984
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| || ||||| |||||||||    
T  44652053 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccgaggttcgaaccccgga 44651984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 52945894 - 52945959
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccc 101  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | |||||||||| |||||    
T  52945894 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggtcggggttcgaaccc 52945959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 25884060 - 25883988
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcat-tgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||| ||||||||| | ||  |||| |||||||||| | |||||||||| |||||||||||    
T  25884060 ccccgtgagcttagcttagttggtagggacaaatgcataatatatgcaggggtcggggttcgaaccccggaca 25883988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 41936471 - 41936407
Alignment:
Q  43 agcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  41936471 agcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 41936407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 45647309 - 45647373
Alignment:
Q  43 agcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||| | ||||| | || ||||||| | | |||||||| |||||||||||    
T  45647309 agcttagctcagttggtagggacattgtataaaatatgcagggggcggggttcgaaccccggaca 45647373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 49447148 - 49447208
Alignment:
Q  47 tagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  49447148 tagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 49447208  T

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Target: scaffold0366 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 926 - 860
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  926 tgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 91 - 20
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| |||||||| ||||| |||||    
T  91 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccctggaca 20  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 3033 - 2962
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    ||||||||||||||||||||||  || | ||||||| ||| |||||| | | |||||||| |||||||||||    
T  3033 ccccatgagcttagctcagttgaaagggacattgcataatttatgcaggggccggggttcgaaccccggaca 2962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 17619 - 17690
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| |||  ||||||| |||||||||||    
T  17619 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaaccccggaca 17690  T

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Target: scaffold0088 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 10897 - 10826
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| | | |||||||| |||||||||||    
T  10897 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggccggggttcgaaccccggaca 10826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 8965 - 9034
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    |||| ||||||||||||||||||||| |  |||||| | |||||||| ||| ||| |||| |||||||||    
T  8965 ccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggagttcgaaccccgga 9034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 12458 - 12531
Alignment:
Q  36 ccccatgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggacatt 109  Q
    |||| ||||| ||||||||||||||| |  |||||| | |||||||| ||| |||||||| ||||||| |||||    
T  12458 ccccgtgagcgtagctcagttggtagggatattgcatattatatgcaggaggcggggttcgaaccccgcacatt 12531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 11181 - 11120
Alignment:
Q  46 ttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  11181 ttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 11120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 21509 - 21448
Alignment:
Q  46 ttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccggaca 107  Q
    |||||||||||||||| |  |||||| | |||||||| ||| |||||||| |||||||||||    
T  21509 ttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggaca 21448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 15768 - 15832
Alignment:
Q  41 tgagcttagctcagttggtagcggcattgcaaaatatatgcatgagtcggggttctaaccccgga 105  Q
    |||||||| |||||||||||| |  |||||| | |||||||| |||||| ||||| |||||||||    
T  15768 tgagcttatctcagttggtagggatattgcatattatatgcaggagtcgaggttcgaaccccgga 15832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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