View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12826_low_11 (Length: 260)

Name: NF12826_low_11
Description: NF12826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12826_low_11
NF12826_low_11
[»] chr8 (51 HSPs)
chr8 (1-90)||(43932046-43932135)
chr8 (1-89)||(34604843-34604931)
chr8 (1-88)||(29690498-29690585)
chr8 (6-89)||(43409832-43409915)
chr8 (1-89)||(35583945-35584033)
chr8 (1-89)||(43292630-43292718)
chr8 (1-91)||(13831871-13831961)
chr8 (1-90)||(40645707-40645796)
chr8 (6-90)||(9420584-9420668)
chr8 (38-90)||(43932148-43932200)
chr8 (1-88)||(7548496-7548583)
chr8 (7-78)||(24599737-24599808)
chr8 (40-91)||(34745253-34745304)
chr8 (1-79)||(9633143-9633221)
chr8 (1-71)||(38298517-38298587)
chr8 (11-89)||(45372777-45372855)
chr8 (40-89)||(43292566-43292615)
chr8 (11-88)||(45180111-45180188)
chr8 (22-90)||(34604778-34604846)
chr8 (4-88)||(41624737-41624821)
chr8 (9-91)||(9550105-9550187)
chr8 (40-89)||(13831976-13832025)
chr8 (1-82)||(34745319-34745400)
chr8 (22-79)||(9633089-9633146)
chr8 (22-90)||(30734515-30734583)
chr8 (38-90)||(43409933-43409985)
chr8 (40-88)||(45372704-45372752)
chr8 (1-76)||(27108000-27108075)
chr8 (38-89)||(35794625-35794676)
chr8 (12-90)||(8793792-8793870)
chr8 (1-79)||(38494301-38494379)
chr8 (38-79)||(5356801-5356842)
chr8 (40-89)||(29690434-29690483)
chr8 (38-90)||(7693132-7693184)
chr8 (36-88)||(8242137-8242189)
chr8 (24-92)||(42122961-42123029)
chr8 (11-90)||(7693030-7693109)
chr8 (28-91)||(16448785-16448848)
chr8 (12-70)||(5031537-5031595)
chr8 (1-83)||(5356855-5356937)
chr8 (40-89)||(7548598-7548648)
chr8 (24-82)||(24599674-24599732)
chr8 (36-90)||(24822820-24822874)
chr8 (40-90)||(44579994-44580044)
chr8 (37-90)||(1223120-1223173)
chr8 (40-89)||(35583881-35583930)
chr8 (1-90)||(44579890-44579979)
chr8 (24-88)||(3236415-3236479)
chr8 (47-75)||(9550217-9550245)
chr8 (38-90)||(12958874-12958926)
chr8 (38-70)||(38298600-38298632)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-90)||(112820-112909)
scaffold0023 (46-89)||(112930-112973)
[»] chr4 (68 HSPs)
chr4 (4-90)||(29686397-29686483)
chr4 (1-88)||(52136698-52136785)
chr4 (6-87)||(56491072-56491153)
chr4 (1-85)||(54864126-54864210)
chr4 (1-88)||(25756711-25756798)
chr4 (1-83)||(27587250-27587332)
chr4 (1-91)||(43141762-43141852)
chr4 (1-90)||(31853129-31853218)
chr4 (1-90)||(33622877-33622966)
chr4 (4-88)||(4418162-4418246)
chr4 (1-89)||(33615841-33615929)
chr4 (1-77)||(54673372-54673448)
chr4 (1-88)||(7086193-7086280)
chr4 (10-88)||(25874771-25874849)
chr4 (10-88)||(37895254-37895332)
chr4 (1-90)||(28460808-28460897)
chr4 (11-88)||(32193474-32193551)
chr4 (20-84)||(1100899-1100963)
chr4 (1-73)||(52966409-52966481)
chr4 (38-89)||(25756811-25756862)
chr4 (1-88)||(36196364-36196451)
chr4 (1-91)||(1205144-1205234)
chr4 (11-89)||(38208321-38208399)
chr4 (1-80)||(8347498-8347578)
chr4 (1-73)||(40592726-40592798)
chr4 (1-88)||(42160035-42160122)
chr4 (22-88)||(8347575-8347641)
chr4 (1-90)||(35929072-35929160)
chr4 (1-90)||(43556688-43556777)
chr4 (40-89)||(54864062-54864111)
chr4 (1-89)||(22019932-22020020)
chr4 (12-92)||(36132630-36132710)
chr4 (1-81)||(50511251-50511331)
chr4 (38-82)||(54673315-54673359)
chr4 (1-88)||(35877376-35877463)
chr4 (40-90)||(36196466-36196516)
chr4 (40-90)||(37895356-37895406)
chr4 (24-90)||(48195975-48196041)
chr4 (36-89)||(29686497-29686550)
chr4 (40-89)||(35877312-35877361)
chr4 (40-80)||(52966496-52966536)
chr4 (37-84)||(50511391-50511438)
chr4 (38-89)||(53225743-53225794)
chr4 (1-89)||(9813452-9813542)
chr4 (38-88)||(24100758-24100808)
chr4 (38-88)||(33615778-33615828)
chr4 (40-90)||(33622981-33623031)
chr4 (38-91)||(9813555-9813608)
chr4 (2-91)||(19350608-19350696)
chr4 (40-89)||(43141867-43141916)
chr4 (48-84)||(4418100-4418136)
chr4 (40-87)||(43556792-43556840)
chr4 (38-90)||(48361049-48361101)
chr4 (24-88)||(48361137-48361201)
chr4 (38-89)||(27587345-27587396)
chr4 (38-85)||(56491171-56491218)
chr4 (24-74)||(23208647-23208697)
chr4 (24-90)||(30191981-30192047)
chr4 (47-88)||(17316588-17316629)
chr4 (37-74)||(22210874-22210911)
chr4 (46-91)||(38688018-38688063)
chr4 (24-89)||(44111743-44111808)
chr4 (16-89)||(55190743-55190816)
chr4 (22-90)||(3345400-3345468)
chr4 (24-84)||(20215566-20215626)
chr4 (1-33)||(24100821-24100853)
chr4 (48-88)||(42159972-42160012)
chr4 (11-91)||(47943799-47943879)
[»] chr2 (56 HSPs)
chr2 (1-88)||(27311576-27311663)
chr2 (4-88)||(6971635-6971719)
chr2 (1-83)||(40534517-40534599)
chr2 (6-91)||(25795234-25795319)
chr2 (1-91)||(3365271-3365361)
chr2 (1-91)||(28143739-28143831)
chr2 (13-82)||(45076416-45076485)
chr2 (38-89)||(25795337-25795388)
chr2 (40-91)||(28143846-28143897)
chr2 (1-88)||(36103392-36103479)
chr2 (40-91)||(45076338-45076389)
chr2 (40-90)||(15239793-15239843)
chr2 (1-89)||(15239690-15239778)
chr2 (22-89)||(40534596-40534663)
chr2 (6-76)||(11687486-11687556)
chr2 (40-90)||(36103494-36103544)
chr2 (1-79)||(38448946-38449024)
chr2 (1-78)||(41464776-41464853)
chr2 (12-88)||(30761451-30761527)
chr2 (39-91)||(38449038-38449090)
chr2 (4-71)||(14329203-14329270)
chr2 (47-80)||(6971503-6971536)
chr2 (20-89)||(9152460-9152529)
chr2 (1-90)||(9373391-9373480)
chr2 (24-89)||(12486077-12486142)
chr2 (11-88)||(12962777-12962854)
chr2 (37-77)||(21424911-21424951)
chr2 (47-78)||(6971579-6971610)
chr2 (22-88)||(7943522-7943589)
chr2 (58-89)||(21795034-21795065)
chr2 (39-90)||(27964277-27964328)
chr2 (24-87)||(41824341-41824404)
chr2 (39-89)||(12873721-12873771)
chr2 (58-88)||(16621870-16621900)
chr2 (46-88)||(27311684-27311726)
chr2 (38-76)||(44283632-44283670)
chr2 (37-90)||(27306807-27306860)
chr2 (24-89)||(29988977-29989042)
chr2 (38-90)||(4063370-4063422)
chr2 (11-83)||(10204998-10205070)
chr2 (1-76)||(11724332-11724408)
chr2 (1-61)||(23464522-23464582)
chr2 (24-88)||(38982998-38983062)
chr2 (16-88)||(45571029-45571101)
chr2 (16-88)||(45574696-45574768)
chr2 (16-88)||(45578363-45578435)
chr2 (16-88)||(45582030-45582102)
chr2 (16-88)||(45585697-45585769)
chr2 (16-88)||(45589364-45589436)
chr2 (16-88)||(45593031-45593103)
chr2 (16-88)||(45596698-45596770)
chr2 (16-88)||(45600365-45600437)
chr2 (16-88)||(45604032-45604104)
chr2 (16-88)||(45607699-45607771)
chr2 (16-88)||(45611366-45611438)
chr2 (16-88)||(45615033-45615105)
[»] chr1 (46 HSPs)
chr1 (87-158)||(534746-534817)
chr1 (1-90)||(51590492-51590581)
chr1 (1-88)||(22182764-22182851)
chr1 (1-90)||(13321776-13321865)
chr1 (1-85)||(15699526-15699610)
chr1 (1-81)||(19998473-19998553)
chr1 (1-90)||(18038750-18038839)
chr1 (1-89)||(34174884-34174972)
chr1 (1-89)||(48565589-48565677)
chr1 (1-91)||(44224331-44224421)
chr1 (1-83)||(45977098-45977180)
chr1 (4-77)||(31050315-31050388)
chr1 (38-87)||(22182864-22182913)
chr1 (40-89)||(25238674-25238723)
chr1 (40-89)||(51590428-51590477)
chr1 (1-90)||(52279231-52279320)
chr1 (1-89)||(27687839-27687927)
chr1 (11-90)||(37178982-37179061)
chr1 (24-90)||(26924298-26924364)
chr1 (1-83)||(52030872-52030954)
chr1 (38-91)||(18038684-18038737)
chr1 (38-91)||(19998407-19998460)
chr1 (11-88)||(29438210-29438287)
chr1 (7-79)||(5966943-5967015)
chr1 (1-89)||(13320301-13320389)
chr1 (1-89)||(13770771-13770859)
chr1 (38-90)||(15699461-15699513)
chr1 (1-89)||(43850947-43851035)
chr1 (37-88)||(31050249-31050300)
chr1 (10-76)||(20486728-20486794)
chr1 (39-88)||(5966873-5966922)
chr1 (39-88)||(29892230-29892279)
chr1 (24-88)||(519832-519896)
chr1 (40-88)||(52279335-52279383)
chr1 (24-83)||(44939070-44939129)
chr1 (49-91)||(9552689-9552731)
chr1 (39-89)||(9675960-9676010)
chr1 (24-90)||(26760170-26760236)
chr1 (24-90)||(34332561-34332627)
chr1 (11-88)||(29043449-29043526)
chr1 (10-90)||(29064144-29064226)
chr1 (28-89)||(38040274-38040335)
chr1 (38-91)||(50155397-50155450)
chr1 (38-90)||(26760272-26760324)
chr1 (38-90)||(26924210-26924262)
chr1 (13-89)||(38834605-38834681)
[»] chr7 (59 HSPs)
chr7 (1-89)||(22618225-22618313)
chr7 (1-90)||(47612352-47612441)
chr7 (1-88)||(40234765-40234852)
chr7 (1-82)||(7456424-7456505)
chr7 (1-90)||(24164578-24164667)
chr7 (1-89)||(33901100-33901188)
chr7 (1-89)||(41487853-41487941)
chr7 (1-85)||(10674185-10674269)
chr7 (6-88)||(29559436-29559518)
chr7 (6-83)||(41088919-41088996)
chr7 (1-81)||(3633197-3633277)
chr7 (1-89)||(27320356-27320444)
chr7 (1-89)||(41395660-41395748)
chr7 (1-89)||(45025656-45025744)
chr7 (40-90)||(12806905-12806955)
chr7 (38-88)||(41088851-41088901)
chr7 (40-90)||(41487788-41487838)
chr7 (36-85)||(13860314-13860363)
chr7 (21-90)||(39413910-39413979)
chr7 (11-91)||(18064794-18064874)
chr7 (40-88)||(40198603-40198651)
chr7 (22-89)||(3633274-3633341)
chr7 (24-91)||(28677313-28677380)
chr7 (1-88)||(47280173-47280259)
chr7 (38-88)||(10674122-10674172)
chr7 (5-75)||(33039572-33039642)
chr7 (24-90)||(36245373-36245439)
chr7 (38-88)||(47612289-47612339)
chr7 (40-85)||(24164518-24164563)
chr7 (40-89)||(24932381-24932430)
chr7 (38-91)||(28248427-28248480)
chr7 (9-74)||(31902963-31903028)
chr7 (40-89)||(45025592-45025641)
chr7 (4-76)||(13860229-13860300)
chr7 (24-88)||(24932454-24932518)
chr7 (1-73)||(45123307-45123379)
chr7 (1-81)||(47484027-47484107)
chr7 (22-88)||(10007659-10007725)
chr7 (1-88)||(28248493-28248584)
chr7 (28-89)||(11668013-11668074)
chr7 (40-89)||(47484122-47484171)
chr7 (1-85)||(14543330-14543414)
chr7 (40-88)||(27320293-27320341)
chr7 (38-78)||(29559536-29559576)
chr7 (48-88)||(33901037-33901077)
chr7 (10-78)||(37006465-37006533)
chr7 (11-70)||(2399969-2400028)
chr7 (38-89)||(2523869-2523920)
chr7 (38-88)||(36245475-36245525)
chr7 (12-70)||(39153304-39153362)
chr7 (24-90)||(40599998-40600064)
chr7 (24-90)||(41850681-41850747)
chr7 (48-81)||(19372732-19372765)
chr7 (43-88)||(33039666-33039711)
chr7 (24-89)||(34840608-34840673)
chr7 (39-88)||(38940215-38940264)
chr7 (38-90)||(4826860-4826912)
chr7 (40-88)||(18064721-18064769)
chr7 (37-73)||(35100346-35100382)
[»] chr6 (26 HSPs)
chr6 (6-90)||(2913400-2913484)
chr6 (1-88)||(23916189-23916276)
chr6 (1-88)||(9343182-9343269)
chr6 (1-83)||(8265034-8265116)
chr6 (10-88)||(30438814-30438892)
chr6 (1-89)||(28605568-28605656)
chr6 (38-89)||(2913331-2913382)
chr6 (1-90)||(10145212-10145301)
chr6 (7-76)||(12240168-12240237)
chr6 (41-77)||(359647-359683)
chr6 (1-88)||(12217489-12217577)
chr6 (1-84)||(26484288-26484370)
chr6 (24-91)||(31632188-31632255)
chr6 (48-90)||(12605607-12605649)
chr6 (1-88)||(359542-359631)
chr6 (40-88)||(10145316-10145364)
chr6 (12-92)||(17265716-17265796)
chr6 (24-76)||(24986017-24986069)
chr6 (1-56)||(29284529-29284584)
chr6 (13-83)||(8029509-8029579)
chr6 (36-90)||(17599552-17599606)
chr6 (24-70)||(28630838-28630884)
chr6 (40-90)||(30438740-30438790)
chr6 (40-85)||(12605711-12605756)
chr6 (47-88)||(17598110-17598151)
chr6 (11-88)||(33119903-33119980)
[»] chr3 (54 HSPs)
chr3 (1-91)||(31376171-31376261)
chr3 (1-88)||(39616910-39616997)
chr3 (1-89)||(53703792-53703881)
chr3 (1-92)||(2544520-2544612)
chr3 (38-88)||(2544436-2544486)
chr3 (1-75)||(50100206-50100280)
chr3 (11-88)||(43901653-43901730)
chr3 (1-90)||(53284378-53284467)
chr3 (1-89)||(8769196-8769283)
chr3 (10-90)||(27302076-27302156)
chr3 (6-82)||(48643609-48643685)
chr3 (40-92)||(53703725-53703777)
chr3 (1-88)||(45113733-45113820)
chr3 (8-82)||(19899682-19899756)
chr3 (1-90)||(16123818-16123907)
chr3 (1-90)||(25313275-25313364)
chr3 (22-89)||(42896140-42896207)
chr3 (4-83)||(44118187-44118266)
chr3 (40-90)||(39617012-39617062)
chr3 (40-89)||(19227409-19227458)
chr3 (40-89)||(31376276-31376325)
chr3 (40-89)||(45113835-45113884)
chr3 (24-89)||(51517042-51517107)
chr3 (1-89)||(8764294-8764381)
chr3 (1-69)||(19227326-19227394)
chr3 (1-89)||(48346448-48346536)
chr3 (38-89)||(28406566-28406617)
chr3 (21-88)||(50659948-50660015)
chr3 (24-90)||(42896227-42896293)
chr3 (39-89)||(44118283-44118333)
chr3 (38-88)||(48643703-48643753)
chr3 (40-81)||(21944295-21944336)
chr3 (26-90)||(8266318-8266382)
chr3 (38-89)||(14197801-14197852)
chr3 (43-89)||(27330036-27330082)
chr3 (24-90)||(53441904-53441970)
chr3 (1-78)||(27363170-27363247)
chr3 (1-78)||(36191539-36191616)
chr3 (38-90)||(21662883-21662935)
chr3 (40-88)||(27302180-27302228)
chr3 (46-90)||(28406464-28406508)
chr3 (40-76)||(36191485-36191521)
chr3 (49-88)||(16123756-16123795)
chr3 (39-82)||(25313641-25313684)
chr3 (46-89)||(50660045-50660088)
chr3 (13-91)||(4190621-4190699)
chr3 (11-88)||(13622486-13622563)
chr3 (25-70)||(43343532-43343577)
chr3 (24-89)||(43449043-43449108)
chr3 (47-88)||(46220365-46220406)
chr3 (39-88)||(48346550-48346599)
chr3 (24-88)||(12064908-12064972)
chr3 (24-88)||(21662971-21663035)
chr3 (12-88)||(39964290-39964366)
[»] scaffold0059 (2 HSPs)
scaffold0059 (1-89)||(26584-26672)
scaffold0059 (38-89)||(26685-26736)
[»] scaffold0767 (2 HSPs)
scaffold0767 (1-74)||(3871-3944)
scaffold0767 (38-89)||(3807-3858)
[»] chr5 (48 HSPs)
chr5 (21-89)||(73782-73850)
chr5 (1-88)||(13932523-13932610)
chr5 (11-90)||(29874314-29874393)
chr5 (11-88)||(29002741-29002818)
chr5 (1-85)||(20502149-20502233)
chr5 (1-89)||(33247290-33247378)
chr5 (10-89)||(7537092-7537171)
chr5 (37-88)||(8680639-8680690)
chr5 (1-88)||(38978804-38978891)
chr5 (1-90)||(5355613-5355702)
chr5 (1-90)||(29451955-29452043)
chr5 (38-89)||(73883-73934)
chr5 (1-91)||(32455137-32455225)
chr5 (1-83)||(13278948-13279030)
chr5 (38-88)||(13932460-13932510)
chr5 (36-88)||(30132885-30132937)
chr5 (11-89)||(24173418-24173496)
chr5 (38-91)||(19211276-19211329)
chr5 (46-91)||(30132838-30132883)
chr5 (12-89)||(33478180-33478257)
chr5 (1-73)||(35204985-35205057)
chr5 (1-73)||(35212102-35212174)
chr5 (43-90)||(7537018-7537065)
chr5 (13-88)||(10228141-10228216)
chr5 (24-90)||(29299442-29299509)
chr5 (24-90)||(13789729-13789795)
chr5 (40-90)||(33247392-33247442)
chr5 (40-89)||(20502085-20502134)
chr5 (40-89)||(29451891-29451940)
chr5 (38-90)||(13278883-13278935)
chr5 (40-88)||(27600758-27600805)
chr5 (16-88)||(29031113-29031185)
chr5 (40-88)||(38978741-38978789)
chr5 (39-86)||(17225159-17225206)
chr5 (1-88)||(27600820-27600907)
chr5 (1-79)||(35318522-35318600)
chr5 (38-88)||(38394427-38394477)
chr5 (24-85)||(5002142-5002203)
chr5 (24-89)||(7313911-7313976)
chr5 (37-70)||(8680588-8680621)
chr5 (24-85)||(13654507-13654568)
chr5 (27-88)||(18473563-18473624)
chr5 (11-88)||(33970656-33970733)
chr5 (46-90)||(1643451-1643495)
chr5 (14-70)||(4527722-4527778)
chr5 (46-90)||(7945834-7945878)
chr5 (37-77)||(9630245-9630285)
chr5 (37-88)||(11931968-11932020)
[»] scaffold0533 (2 HSPs)
scaffold0533 (8-76)||(3251-3319)
scaffold0533 (38-90)||(3339-3390)
[»] scaffold0287 (2 HSPs)
scaffold0287 (1-81)||(12808-12888)
scaffold0287 (22-89)||(12744-12811)
[»] scaffold0200 (2 HSPs)
scaffold0200 (1-83)||(25618-25700)
scaffold0200 (48-89)||(25724-25765)
[»] scaffold0110 (2 HSPs)
scaffold0110 (1-88)||(40189-40277)
scaffold0110 (38-90)||(40290-40342)
[»] scaffold0460 (2 HSPs)
scaffold0460 (1-76)||(12275-12350)
scaffold0460 (10-76)||(7717-7783)
[»] scaffold0474 (1 HSPs)
scaffold0474 (2-77)||(11858-11934)
[»] scaffold0015 (1 HSPs)
scaffold0015 (38-88)||(17384-17434)
[»] scaffold0221 (1 HSPs)
scaffold0221 (46-90)||(11027-11071)
[»] scaffold0027 (1 HSPs)
scaffold0027 (38-74)||(5513-5549)


Alignment Details
Target: chr8 (Bit Score: 82; Significance: 8e-39; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 43932135 - 43932046
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43932135 atcttgttataaatatagattagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 43932046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 34604843 - 34604931
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| || ||||||||| |||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  34604843 atcttattgtaaatatagactagatacatcacttatacaatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagtat 34604931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29690498 - 29690585
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| |||||||||||| |||||||||||| || ||||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  29690498 atcttattataaatatagactagatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccggaggaagta 29690585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 43409915 - 43409832
Alignment:
Q  6 gttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||||| |||||||||| | || ||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  43409915 gttataaatatagactagatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccggagggagtat 43409832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35583945 - 35584033
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| || |||||||||  ||||||||||| || ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  35583945 atcttattgtaaatatagattagatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccggagggagtat 35584033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43292630 - 43292718
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||| |||||||||||| ||  | ||||||||||||||||||| |||||||||||||||||||| || |||||||    
T  43292630 atcttgttataaatatagactagatacatcacttacataatgaacctaaaaagtcaaatgtttcttataataaggaccagatggagtat 43292718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13831961 - 13831871
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||| || ||||||||| ||| |||||||| || ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||    
T  13831961 atcttattgtaaatatagactatatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccgaagggagtattt 13831871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 40645796 - 40645707
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||||||||||||| |||||||||||| ||  | ||||||| ||||||||||| ||||||||||||||||||| ||||| ||||||    
T  40645796 atcttgttataaatatagactagatacatcacttacataatgaacttaaaaagtcaaatgtttcttataataaggactggaggaagtatt 40645707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 9420668 - 9420584
Alignment:
Q  6 gttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||||| | |||||||| | || ||||||||| |||||| |||||||| | |||||||||||||||||||||||||||    
T  9420668 gttataaatatagaccagatacattacttatacaatgaatctaaaacgtcaattgctgcttataataaggaccggagggagtatt 9420584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 43932148 - 43932200
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43932148 caatgaatctaaaaagtcaattgtttcttataataaggaccggagggagtatt 43932200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7548583 - 7548496
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| || ||||||||| ||| |||||||| ||  |||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  7548583 atcttattgtaaatatagtctaaatacatcacttacacaatgaaccaaaaaaattaattgtttcttataataaggaccggagggagta 7548496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 24599737 - 24599808
Alignment:
Q  7 ttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggacc 78  Q
    ||||||||||||| ||||||||||| || ||||||||| ||||||| ||||||||||||||| |||||||||    
T  24599737 ttataaatataggttagatacatcagttatacaatgaatctaaaaaatcaattgtttcttattataaggacc 24599808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 34745304 - 34745253
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34745304 atgaaccaaaaaagtcaattgtttcttataataaggaccggagggagtattt 34745253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9633143 - 9633221
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccg 79  Q
    |||||||||||||||||| ||||||||||  |||  ||||||||| ||||||||||| |||||||||||| ||||||||    
T  9633143 atcttgttataaatatagactagatacattgtttacacaatgaacttaaaaagtcaaatgtttcttataagaaggaccg 9633221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38298587 - 38298517
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataat 71  Q
    |||| |||||||||||||||||||||||||| ||  ||||||||| ||||||||||||| |||||||||||    
T  38298587 atctcgttataaatataggctagatacatcacttacacaatgaacttaaaaagtcaattatttcttataat 38298517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 45372777 - 45372855
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||| |||||||||||| ||  ||| |||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  45372777 aaatatagactagatacatcacttacacattgaatcaaaaaagtcaattgttacttataataaggaccggagggagtat 45372855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 43292615 - 43292566
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43292615 atgaaccaaaaaagtcaattgtttcttataataaggaccggagggagtat 43292566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 45180111 - 45180188
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| |||||||||||| ||  |||||||||| |||||||||||||||| ||||||||| ||||| ||||||||    
T  45180111 aaatatagactagatacatcacttacacaatgaaccaaaaaagtcaattgttttttataataaagaccgaagggagta 45180188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 34604846 - 34604778
Alignment:
Q  22 agatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||| |||| | | |||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  34604846 agatacattatttattctatgaacctaaaaagtcaactttttcttataataaggaccggagggagtatt 34604778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 41624821 - 41624737
Alignment:
Q  4 ttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||||||| ||| |||||||| || || || |||||||||||||||  ||||||||||||||| || |||||||||||    
T  41624821 ttgttataaatatagactaaatacatcacttatataaggaacctaaaaagtcatatgtttcttataataaagatcggagggagta 41624737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 9550187 - 9550105
Alignment:
Q  9 ataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    |||||||||| |||||||||||| ||   |||||||  |||||| |||||| ||||||||||||| |||||||||||||||||    
T  9550187 ataaatatagactagatacatcacttacccaatgaatttaaaaaatcaattatttcttataataaagaccggagggagtattt 9550105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 13831976 - 13832025
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||    
T  13831976 atgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 13832025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 34745319 - 34745400
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggag 82  Q
    |||||||||||||||||| |||||||||||| ||  | |||||| ||||||| |||| ||||||||||||||| || |||||    
T  34745319 atcttgttataaatatagactagatacatcacttacataatgaatctaaaaaatcaaatgtttcttataataaagatcggag 34745400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 9633146 - 9633089
Alignment:
Q  22 agatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccg 79  Q
    |||||||| | || ||||||||| |||||| |||||||||||||||||||||||||||    
T  9633146 agatacattaattatacaatgaatctaaaacgtcaattgtttcttataataaggaccg 9633089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 30734583 - 30734515
Alignment:
Q  22 agatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||||| ||  |||||||| ||||||| | | |||||||||||||||||||||| ||||||||||    
T  30734583 agatacatcaattacacaatgaatctaaaaaataatttgtttcttataataaggaccgaagggagtatt 30734515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 43409933 - 43409985
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||| ||||||||| ||||| || ||||||||||||||||||||||||    
T  43409933 caatgaaccgaaaaagtcatttgttgctaataataaggaccggagggagtatt 43409985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 45372752 - 45372704
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  45372752 atgaacctaaaaagtcaactttttcttatattaaggaccggagggagta 45372704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27108075 - 27108000
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagga 76  Q
    |||| |||||||||| ||  ||||||||||||||  | ||||||| ||||| | ||||||||||||||||||||||    
T  27108075 atctcgttataaatacagattagatacatcatttacataatgaacataaaatgacaattgtttcttataataagga 27108000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 35794625 - 35794676
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||||||||||    
T  35794625 caatgaatctaaaaagtaaaaagtttcttataataaggaccggagggagtat 35794676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 8793792 - 8793870
Alignment:
Q  12 aatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||| ||| ||||||||||| | ||||||| | |||||||||| | ||||||||||  |||||||||| |||||||    
T  8793792 aatatagactaaatacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaataggaccggagagagtatt 8793870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38494301 - 38494379
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccg 79  Q
    |||||||||||||||||   |||||||| || ||  ||||| |||||||||| |||||| |||||||||||||| ||||    
T  38494301 atcttgttataaatataaattagatacaccacttacacaataaacctaaaaaatcaattttttcttataataagaaccg 38494379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 5356842 - 5356801
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccg 79  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  5356842 caatgaatctaaaaagtcaattgttgcttataataaggaccg 5356801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 29690483 - 29690434
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||||||||| || |||||||||||||||||  ||||||||||    
T  29690483 atgaacctaaaaagtcagttttttcttataataaggactagagggagtat 29690434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 7693132 - 7693184
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||| |||||||||||||| ||||||||||  ||||||||| ||||||||    
T  7693132 caatgaatctaaaaagtcaattttttcttataaataggaccggaaggagtatt 7693184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 8242189 - 8242137
Alignment:
Q  36 tacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||| |||||||||| |||||||||||||||| ||| ||| |||||    
T  8242189 tacaatgaaccaaaaaagtcaactgtttcttataataagaaccagagagagta 8242137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 42123029 - 42122961
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatttg 92  Q
    ||||||||||| | ||||||| | ||||||||||  |||||||||||  ||||| ||||||||||||||    
T  42123029 atacatcatttatgcaatgaatcaaaaaagtcaaacgtttcttataaataggactggagggagtatttg 42122961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 7693109 - 7693030
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||| ||| ||||||||||| | ||||||| | ||||||| || ||||||||||||  ||||  ||||||||||||    
T  7693109 aaatatagactaaatacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggattggagggagtatt 7693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 16448848 - 16448785
Alignment:
Q  28 atcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||||| | ||||||| | |||||||||| ||||||||||||  ||||||||||| |||||||    
T  16448848 atcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggaggaagtattt 16448785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 5031537 - 5031595
Alignment:
Q  12 aatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataa 70  Q
    ||||||| ||| ||||||||||| | ||||||| | |||||||||| ||||||||||||    
T  5031537 aatatagactaaatacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataa 5031595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 5356855 - 5356937
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    |||| ||||||||||| |  ||||||||||| || |||||| || ||||||||| || |||| |||||||||| ||| |||||    
T  5356855 atctcgttataaatatggattagatacatcacttatacaataaatctaaaaagttaactgttgcttataataaagacgggagg 5356937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 7548598 - 7548648
Alignment:
Q  40 atgaacctaaaaag-tcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||  |||| | |||||||||||||||||||||||||||||    
T  7548598 atgaacctaaaaaaatcaactttttcttataataaggaccggagggagtat 7548648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 24599732 - 24599674
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggag 82  Q
    |||||| |||| | |||||||  ||||||||||||| ||||||||||||| ||||||||    
T  24599732 atacattatttattcaatgaatttaaaaagtcaattatttcttataataaagaccggag 24599674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 24822820 - 24822874
Alignment:
Q  36 tacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||| || |||||||||||||| ||||||||||  ||||||||||||| ||||    
T  24822820 tacaataaatctaaaaagtcaattttttcttataaataggaccggagggaatatt 24822874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 44579994 - 44580044
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||| ||||||||||| | ||||||||||||||||| | ||||||||||    
T  44579994 atgaacttaaaaagtcaactttttcttataataaggactgaagggagtatt 44580044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 1223173 - 1223120
Alignment:
Q  37 acaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||| ||||||||||| || ||||||||||  | ||||||||||||||||    
T  1223173 acaatgaatctaaaaagtcacttttttcttataaatatgaccggagggagtatt 1223120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 35583930 - 35583881
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||| ||||  | ||||||||||||||||| |||||||||||    
T  35583930 atgaacctaaaaggtcatatttttcttataataaggactggagggagtat 35583881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 44579979 - 44579890
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| || ||||||||| ||||||| || | || |||||| || | ||||||| |||||||||||||||||| ||| ||  ||||||||    
T  44579979 atcttattgtaaatatagactagatatattacttatacaataaatcaaaaaagttaattgtttcttataataaagactggttggagtatt 44579890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 3236415 - 3236479
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||| |||||||||   |||||||||| | ||||||||||  | ||||||||||||||    
T  3236415 atacatcatttatacaatgaattaaaaaagtcaaatatttcttataaatatgaccggagggagta 3236479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 75
Target Start/End: Original strand, 9550217 - 9550245
Alignment:
Q  47 taaaaagtcaattgtttcttataataagg 75  Q
    |||||||||||||||||||||||||||||    
T  9550217 taaaaagtcaattgtttcttataataagg 9550245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 12958874 - 12958926
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||| | ||||||| ||||||||||||||   ||||||||||||||||||    
T  12958874 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtatt 12958926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 38298600 - 38298632
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataa 70  Q
    ||||||||||||||| |||||||||||||||||    
T  38298600 caatgaacctaaaaaatcaattgtttcttataa 38298632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 112909 - 112820
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  112909 atcttgttataaatatagattagatacatcatttgtacaatgaacctaaaacgtcaattgtttcttataataaggacccgagggagtatt 112820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 112930 - 112973
Alignment:
Q  46 ctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  112930 ctaaaaagtcaattgtttcttatgttaaggaccggagggagtat 112973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 29686483 - 29686397
Alignment:
Q  4 ttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29686483 ttgttataaatatagactagatacatcatttacacaatgaacctaaaaagtcaaatgtttcttataataaggaccggagggagtatt 29686397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 52136785 - 52136698
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||| ||| |||||||| ||  |||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  52136785 atcttgttataaatatagactaaatacatcacttacacaatgaacctaaaaagttaattttttcttataataaggaccggagggagta 52136698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 56491153 - 56491072
Alignment:
Q  6 gttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagt 87  Q
    ||||||||||||| |||||||||| | || ||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  56491153 gttataaatatagactagatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccggagggagt 56491072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 54864126 - 54864210
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggaggga 85  Q
    ||||| || ||||||||| |||||||||||| || ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  54864126 atcttattgtaaatatagactagatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccggaggga 54864210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 25756798 - 25756711
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||| |||||||||| || |||||||||||| ||  ||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25756798 atctcgttataaatagagactagatacatcacttacacagtgaacctaaaaagtcaattatttcttataataaggaccggagggagta 25756711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27587332 - 27587250
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    |||| ||||||||||||  ||||||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  27587332 atctcgttataaatatacactagatacatcatttatataataaatctaaaaagtcaattgtttcttataataaggaccggagg 27587250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 43141852 - 43141762
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||| || |||||||||  ||||||||||| || ||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||    
T  43141852 atcttattgtaaatatagattagatacatcacttatacaatgaaccaaaaaagttaattgtttcttataataaggaccggagggaatattt 43141762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31853129 - 31853218
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||||||||||||| |||||||||||| ||  ||||||||||||||||||||| | ||||||||||||| |||| || ||||||||    
T  31853129 atcttgttataaatatagactagatacatcacttacacaatgaacctaaaaagtcaaatttttcttataataaagaccagaaggagtatt 31853218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 33622966 - 33622877
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| || ||||||||  ||||||||||||  | ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  33622966 atcttattgtaaatataaactagatacatcacctatacaatgaaccaaaaaagttaattgtttcttataataaggaccggagggagtatt 33622877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 4418162 - 4418246
Alignment:
Q  4 ttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||||||  ||| |||||||| ||  |||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  4418162 ttgttataaatataaactaaatacatcacttacacaatgaacctaaaaaatcaattttttcttataataaggaccggagggagta 4418246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33615841 - 33615929
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| || ||||||||| |||||||||||| ||  |||||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  33615841 atcttattgtaaatatagactagatacatcacttacacaatgaatctaaaaattcaattgttttttataataaggaccggagggagtat 33615929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 54673372 - 54673448
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggac 77  Q
    |||| ||||||||||||| |||||||||||| ||  | |||||||||||||||||||||||||||||||||||||||    
T  54673372 atctcgttataaatatagactagatacatcacttacataatgaacctaaaaagtcaattgtttcttataataaggac 54673448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 7086193 - 7086280
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||| ||||||||| ||| | |||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  7086193 atctcgttataaatgtagaccagatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccggaaggagta 7086280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 25874771 - 25874849
Alignment:
Q  10 taaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||| |||||||||||| || ||||||||||| ||||| | |||| ||||||||||||||||||||||||||||    
T  25874771 taaatatagactagatacatcacttatacaatgaaccaaaaaaattaattctttcttataataaggaccggagggagta 25874849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 37895332 - 37895254
Alignment:
Q  10 taaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| ||| |||||||||||| || ||||||||||| ||||| |||| ||||||||||||||||||||||||||||||    
T  37895332 taaatgtagactagatacatcacttatacaatgaaccaaaaaaatcaactgtttcttataataaggaccggagggagta 37895254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 28460808 - 28460897
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||| ||||||||| ||| |||||||| || || |||||| |||||||| |||||||||||||||||||| | |||||||||||||    
T  28460808 atcttgttgtaaatatagactaaatacatcacttatataatgaatctaaaaagccaattgtttcttataataagaatcggagggagtatt 28460897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 32193551 - 32193474
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| |||||||||| | ||  | |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32193551 aaatatagactagatacattacttacataatgaaccaaaaaagtcaattgtttcttataataaggaccggagggagta 32193474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 1100963 - 1100899
Alignment:
Q  20 ctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggaggg 84  Q
    |||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1100963 ctagatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccggaggg 1100899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 52966481 - 52966409
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataa 73  Q
    |||||||||||||||||| |||||||||||| || |||||||||| ||||||||||| | |||||||||||||    
T  52966481 atcttgttataaatatagactagatacatcacttatacaatgaacttaaaaagtcaaatttttcttataataa 52966409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 25756811 - 25756862
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25756811 caatgaacataaaaagtcaattgtttcttataataaggaccggagggagtat 25756862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36196451 - 36196364
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| || ||||| ||| ||| |||||||| || || |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  36196451 atcttattgtaaatgtagactatatacatcacttataaaatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagta 36196364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1205144 - 1205234
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||| |||||||||||| |||||||||||| ||  ||||||||  |||||| |||||| ||||||||||||| || ||||||||||||||    
T  1205144 atcttattataaatatagactagatacatcacttagacaatgaatataaaaaatcaattttttcttataataaagatcggagggagtattt 1205234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 38208321 - 38208399
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||| |||||||||||| ||  |||||||||  |||| ||||||||||||||||| |||||||||||||||||||    
T  38208321 aaatatagactagatacatcacttaaacaatgaactaaaaatgtcaattgtttcttatattaaggaccggagggagtat 38208399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8347578 - 8347498
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacc-taaaaagtcaattgtttcttataataaggaccgg 80  Q
    ||||| || ||||||||| ||||||||||||||| |||||||||||  ||||| |||| ||||||||||||||||||||||    
T  8347578 atcttattgtaaatatagactagatacatcatttatacaatgaaccaaaaaaaatcaaatgtttcttataataaggaccgg 8347498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 40592798 - 40592726
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataa 73  Q
    |||||||||||||||||  |||||||||||| || ||||||||| | ||||||| ||||||||||||||||||    
T  40592798 atcttgttataaatataaactagatacatcacttatacaatgaatccaaaaagttaattgtttcttataataa 40592726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 42160035 - 42160122
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||| ||| |||||||| ||  | |||||  |||||||||||| ||||||||||||||| ||||||||| ||||    
T  42160035 atcttgttataaatatagactaaatacatcacttacataatgattctaaaaagtcaaatgtttcttataataaagaccggaggaagta 42160122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 8347575 - 8347641
Alignment:
Q  22 agatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| |||| | | |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  8347575 agatacattatttattctatgaacctaaaaagtcaactttttcttataataaggaccggagggagta 8347641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 35929072 - 35929160
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| ||||||||||||  ||||||||||| ||  |||||||||| ||||| |||||||||||||||||||| ||||| || |||||||    
T  35929072 atcttattataaatatagattagatacatcacttacacaatgaaccaaaaaa-tcaattgtttcttataataatgaccgaagagagtatt 35929160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 43556777 - 43556688
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| || ||||| ||| |||||||| ||| ||  |||| ||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  43556777 atcttattgtaaatgtagactagatacgtcacttacacaacgaactaaaaaaatcaattgtttcttataataaggaccggagggagtatt 43556688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 54864111 - 54864062
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||    
T  54864111 atgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 54864062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 22020020 - 22019932
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||| |||||||||||||  |||| |||||| ||  | |||||| ||||||||| ||||||| |||||||||||||||||| |||||||    
T  22020020 atctcgttataaatatagattagacacatcacttacagaatgaatctaaaaagttaattgttacttataataaggaccggatggagtat 22019932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 36132710 - 36132630
Alignment:
Q  12 aatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatttg 92  Q
    ||||||| ||| ||||||||||| ||||||||| | |||||||||| | ||||||||||  ||||| ||||||||||||||    
T  36132710 aatatagactaaatacatcatttatacaatgaatcaaaaaagtcaaatatttcttataaataggactggagggagtatttg 36132630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 50511331 - 50511251
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccgga 81  Q
    ||||| || ||||||||| ||| |||||||| ||  |||||||||| ||||||| |||||||||||||||||| |||||||    
T  50511331 atcttattgtaaatatagtctaaatacatcacttacacaatgaaccaaaaaagttaattgtttcttataataaagaccgga 50511251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 54673359 - 54673315
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggag 82  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  54673359 caatgaacctaaaaagtcaaatgtttcttataataaggaccggag 54673315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35877376 - 35877463
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| || ||||||||| ||| |||||||| ||  |||||||||| ||||| | ||||||||||||||||||||| ||| |||||||    
T  35877376 atcttattgtaaatatagtctaaatacatcacttacacaatgaaccaaaaaaattaattgtttcttataataaggatcggtgggagta 35877463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 36196466 - 36196516
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  36196466 atgaatctaaaaaatcaattttttcttataataaggaccggagggagtatt 36196516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 37895356 - 37895406
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||||||||    
T  37895356 atgaatctaaaaagtcaactttttcttataataaggaccggagggagtatt 37895406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 48195975 - 48196041
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||| | ||||||||| |||||||||| ||||||||||||  ||||||||||| ||||||    
T  48195975 atacatcatttatgcaatgaaccaaaaaagtcaaatgtttcttataaataggaccggaggaagtatt 48196041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 29686497 - 29686550
Alignment:
Q  36 tacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||  |||||| | ||||||||||||||||||||||||||||||||||    
T  29686497 tacaatgaatttaaaaaattaattgtttcttataataaggaccggagggagtat 29686550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 35877361 - 35877312
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| |||||||||||| | |||||||||||||||||||||||||||||    
T  35877361 atgaatctaaaaagtcaactttttcttataataaggaccggagggagtat 35877312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 52966496 - 52966536
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccgg 80  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  52966496 atgaaccaaaaaagtcaattgtttcttataataaggaccgg 52966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 50511438 - 50511391
Alignment:
Q  37 acaatgaacctaaaaagtcaattgtttcttataataaggaccggaggg 84  Q
    |||||||||  |||||||||| ||||||||||||||||||||||||||    
T  50511438 acaatgaactaaaaaagtcaagtgtttcttataataaggaccggaggg 50511391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 53225743 - 53225794
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| |||||||||||||| ||||||||||  |||||||||||||||||    
T  53225743 caatgaatctaaaaagtcaattttttcttataaataggaccggagggagtat 53225794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 9813542 - 9813452
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaaccta-aaaagt-caattgtttcttataataaggaccggagggagtat 89  Q
    |||| ||||||||||||| |||||||||||| ||  |||||||||||| |||||| ||||||||  ||||||||| |||  ||||||||||    
T  9813542 atctcgttataaatatagactagatacatcacttacacaatgaacctaaaaaagtacaattgttgattataataaagactagagggagtat 9813452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 24100808 - 24100758
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||| ||||||||| |||| |||||||||||||||| |||||||||||    
T  24100808 caatgaatctaaaaagttaattatttcttataataaggatcggagggagta 24100758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 33615828 - 33615778
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||| ||||||| ||||  |||||||||||||||||||||||||||||    
T  33615828 caatgaatctaaaaaatcaaaagtttcttataataaggaccggagggagta 33615778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 33622981 - 33623031
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||| ||||||||||||| |||||||||||| ||| |||||||||||||    
T  33622981 atgaacgtaaaaagtcaattttttcttataatagggatcggagggagtatt 33623031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 9813555 - 9813608
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    |||| |||||||||||||||||||| ||||| ||||||| |||||| |||||||    
T  9813555 caataaacctaaaaagtcaattgttgcttattataaggatcggaggaagtattt 9813608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 19350696 - 19350608
Alignment:
Q  2 tcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    |||| ||||||||| || |||||||| ||| ||  |||||||||| ||||| | |||||||||||||||||| || |||||| |||||||    
T  19350696 tcttattataaataaagactagatac-tcacttacacaatgaaccaaaaaaattaattgtttcttataataaagatcggaggaagtattt 19350608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 43141867 - 43141916
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||| | ||||||||||||| ||||||||| |||||    
T  43141867 atgaacctaaaaagtcaactttttcttataataaagaccggaggaagtat 43141916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 4418136 - 4418100
Alignment:
Q  48 aaaaagtcaattgtttcttataataaggaccggaggg 84  Q
    ||||| |||||||||||||||||||||||||||||||    
T  4418136 aaaaaatcaattgtttcttataataaggaccggaggg 4418100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 43556792 - 43556840
Alignment:
Q  40 atgaacctaaaaagtcaattgttt-cttataataaggaccggagggagt 87  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||||||    
T  43556792 atgaacctaaaaaatcaatttttttcttataataaggaccggagggagt 43556840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 48361101 - 48361049
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||| |||||||||||| | ||||||||||  ||||||||||||||||||    
T  48361101 caatgaatctaaaaagtcaaatttttcttataaataggaccggagggagtatt 48361049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 48361137 - 48361201
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||| | ||||||| | |||||||||| ||||||||||||  ||||| ||||||||||    
T  48361137 atacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggacaggagggagta 48361201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 27587345 - 27587396
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||||||| | |||| |||||||||||||||| |||||| |||||    
T  27587345 caatgaacctaaaaaataaattatttcttataataaggatcggaggtagtat 27587396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 56491171 - 56491218
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggaggga 85  Q
    |||||||| |||||||||| ||||| ||||||||||||||| ||||||    
T  56491171 caatgaacttaaaaagtcatttgttgcttataataaggacccgaggga 56491218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 23208697 - 23208647
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataag 74  Q
    |||||||| || ||||||||||||||||||| |||||||| | ||||||||    
T  23208697 atacatcaattatacaatgaacctaaaaagttaattgtttttcataataag 23208647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 30191981 - 30192047
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||| | ||||||| | ||||||| || ||||||||||||  | ||||||||||||||||    
T  30191981 atacatcatttatgcaatgaatcaaaaaagttaaatgtttcttataaatacgaccggagggagtatt 30192047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 17316588 - 17316629
Alignment:
Q  47 taaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| || | ||||||||||||||||||||||||||||    
T  17316588 taaaaagttaactttttcttataataaggaccggagggagta 17316629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 22210874 - 22210911
Alignment:
Q  37 acaatgaacctaaaaagtcaattgtttcttataataag 74  Q
    |||||||||||||||| | |||||||||||||||||||    
T  22210874 acaatgaacctaaaaaataaattgtttcttataataag 22210911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 38688018 - 38688063
Alignment:
Q  46 ctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||||||| ||||||||||| |||  |||||||||||||||||||    
T  38688018 ctaaaaagtaaattgtttcttgtaaataggaccggagggagtattt 38688063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 44111808 - 44111743
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||| |  ||| || | |||||||||| ||||||||||||  |||||||||||||||||    
T  44111808 atacatcatttatgtaattaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtat 44111743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 55190743 - 55190816
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||| || |  ||||||  |||||| |||||| ||||||||||  ||||||||||| |||||    
T  55190743 taggctagatacatcaattattgaatgaatataaaaaatcaattttttcttataaataggaccggaggtagtat 55190816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 3345400 - 3345468
Alignment:
Q  22 agatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||||| || | ||||||||||||||||| |||| | |||||| | ||||||| ||| |||||||    
T  3345400 agatacatcaattattcaatgaacctaaaaagtgaattatgtcttattacaaggaccagagagagtatt 3345468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 20215626 - 20215566
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggaggg 84  Q
    ||||||||||| |  ||||||||||||| ||||||| || |||||||||  ||||||||||    
T  20215626 atacatcatttattgaatgaacctaaaatgtcaatttttgcttataatagtgaccggaggg 20215566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24100821 - 24100853
Alignment:
Q  1 atcttgttataaatataggctagatacatcatt 33  Q
    |||||||||||||||||| ||||||||||||||    
T  24100821 atcttgttataaatatagactagatacatcatt 24100853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 42160012 - 42159972
Alignment:
Q  48 aaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| |||||| |||||||||||||||||||||| |||||    
T  42160012 aaaaaatcaattatttcttataataaggaccggagtgagta 42159972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 47943799 - 47943879
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    |||||||| ||| ||||||||||| | ||||||| | |||| ||||| ||||  ||||||  | |||||||||||||||||    
T  47943799 aaatatagactaaatacatcatttatgcaatgaatcaaaaatgtcaaatgttatttataaataagaccggagggagtattt 47943879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27311663 - 27311576
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||    
T  27311663 atcttgttataaatatagactagatatatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagaatccgagggagta 27311576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 6971635 - 6971719
Alignment:
Q  4 ttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||  ||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  6971635 ttgttataaatatagattagatacatcatttacacaatgaacctaaaaagtcaaatgtttcttataataaggacaggaggaagta 6971719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 40534599 - 40534517
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    ||||| || ||||||||| ||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  40534599 atcttattgtaaatatagactagatacatcatttatacaatgaactaaaaaaatcaattgtttcttataataaggaccggagg 40534517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 25795319 - 25795234
Alignment:
Q  6 gttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||||||||||| |||||||||| | ||  || || ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25795319 gttataaatatagactagatacattacttacacgattaacctaaaaagtcaattgtttcttataataaggaccggaggtagtattt 25795234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3365361 - 3365271
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||||||||||||||||  ||||||||||| || ||||||||||||||||||| || | ||||||||||||| |||| |||| |||||||    
T  3365361 atcttgttataaatatagattagatacatcacttatacaatgaacctaaaaagttaaatttttcttataataaagaccagaggtagtattt 3365271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 28143831 - 28143739
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttct--tataataaggaccggagggagtattt 91  Q
    ||||| |||||||||||| |||||||||||| ||  |||||||||| ||||| ||||||||||||  ||||||||||||| | ||||||||||    
T  28143831 atcttattataaatatagactagatacatcacttacacaatgaaccaaaaaaatcaattgtttctaatataataaggaccagtgggagtattt 28143739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 45076416 - 45076485
Alignment:
Q  13 atataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggag 82  Q
    |||||| |||||||||||| ||  |||||||||| |||||||||||||||| ||||||||||||||||||    
T  45076416 atatagactagatacatcacttacacaatgaaccaaaaaagtcaattgttttttataataaggaccggag 45076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 25795337 - 25795388
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  25795337 caatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggagtat 25795388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 28143846 - 28143897
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  28143846 atgaacctaaaaagtcaactttttcttataataaggaccggagggagtattt 28143897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36103479 - 36103392
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| || ||||||||| |||||||||||| ||  |||||||||  |||| || |||||||| ||||||||||||||||||||||||    
T  36103479 atcttattgtaaatatagtctagatacatcacttacacaatgaactaaaaatgttaattgtttattataataaggaccggagggagta 36103392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 45076389 - 45076338
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  45076389 atgaacctaaaaaatcaattttttcttataataaggaccggagggagtattt 45076338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 15239793 - 15239843
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  15239793 atgaacctaaaaagtcaactttttcttataataaggaccggagggagtatt 15239843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15239778 - 15239690
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| || ||||||||| |||||||||||| ||  |||||||||| | ||| ||||||||||||||||||||||| | |||| |||||    
T  15239778 atcttattgtaaatatagactagatacatcacttacacaatgaaccaacaaaatcaattgtttcttataataaggatcagaggaagtat 15239690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 40534596 - 40534663
Alignment:
Q  22 agatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||| |||| | | |||||||||||||||||| | | |||||||||||||||||||||||||||    
T  40534596 agatacattatttattctatgaacctaaaaagtcaactttatcttataataaggaccggagggagtat 40534663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 11687556 - 11687486
Alignment:
Q  6 gttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagga 76  Q
    ||||||||||||| |||||||||||| ||  ||||| ||  || |||||||||||||||||||||||||||    
T  11687556 gttataaatatagactagatacatcacttacacaataaatttataaagtcaattgtttcttataataagga 11687486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 36103494 - 36103544
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  36103494 atgaacctaaaaaatcaactttttcttataataaggaccggagggagtatt 36103544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 38449024 - 38448946
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccg 79  Q
    ||||||| ||||||||||   |||||||||| ||  ||||||||| ||||||||||||||||| |||| ||||||||||    
T  38449024 atcttgtgataaatatagatcagatacatcacttacacaatgaacataaaaagtcaattgttttttatgataaggaccg 38448946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 41464776 - 41464853
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggacc 78  Q
    |||| ||||||||||||| |||||||||||| ||  |||||||||||||||| |||||| ||| |||||  |||||||    
T  41464776 atctcgttataaatatagactagatacatcacttacacaatgaacctaaaaaatcaattattttttatagcaaggacc 41464853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 30761451 - 30761527
Alignment:
Q  12 aatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||| ||| ||||||  ||||| ||||||| | |||||||||| ||||||||||||  ||||||||||||||||    
T  30761451 aatatagactaaatacatattttgtgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagta 30761527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 38449038 - 38449090
Alignment:
Q  39 aatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||||||||||||||||||||||||||| |||||| ||||| || |||||||    
T  38449038 aatgaacctaaaaagtcaattgtttcttaaaataagaaccggtggaagtattt 38449090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 14329203 - 14329270
Alignment:
Q  4 ttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataat 71  Q
    |||||||||||||||   |||||||||| ||  ||||||||||||| ||||||||||| |||||||||    
T  14329203 ttgttataaatatagatcagatacatcacttacacaatgaacctaacaagtcaattgtctcttataat 14329270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 6971536 - 6971503
Alignment:
Q  47 taaaaagtcaattgtttcttataataaggaccgg 80  Q
    ||||||||||||||||||||||||||||||||||    
T  6971536 taaaaagtcaattgtttcttataataaggaccgg 6971503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 9152460 - 9152529
Alignment:
Q  20 ctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||| ||   ||||||| ||||||||||||||||||||| |||  | |||||||||||||||    
T  9152460 ctagatacatcaattactcaatgaatctaaaaagtcaattgtttcttgtaaataagaccggagggagtat 9152529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 9373480 - 9373391
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||| ||||||||| ||| |||||||| ||  | ||| ||| |||||| ||||||||||||||||| ||||||  |||| ||||||    
T  9373480 atcttgttgtaaatatagactacatacatcacttacataataaacttaaaaactcaattgtttcttataacaaggacatgaggaagtatt 9373391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 12486077 - 12486142
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||| || | ||||||| ||||||||||||||||||||| |||  |||||| ||||||||||    
T  12486077 atacatcaattattcaatgaatctaaaaagtcaattgtttcttgtaaataggaccagagggagtat 12486142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 12962777 - 12962854
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| | | ||||||||||| | ||||||| | |||||||||| ||||||||||||  |||||| |||||||||    
T  12962777 aaatatagaccaaatacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccagagggagta 12962854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 21424951 - 21424911
Alignment:
Q  37 acaatgaacctaaaaagtcaattgtttcttataataaggac 77  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  21424951 acaatgaaactaaaaagtaaattgtttcttataataaggac 21424911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 78
Target Start/End: Complemental strand, 6971610 - 6971579
Alignment:
Q  47 taaaaagtcaattgtttcttataataaggacc 78  Q
    ||||||||||||||||||||||||||||||||    
T  6971610 taaaaagtcaattgtttcttataataaggacc 6971579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 7943522 - 7943589
Alignment:
Q  22 agatacatcatttgtacaatgaacctaaaaagtcaa-ttgtttcttataataaggaccggagggagta 88  Q
    |||||||||| || | ||||||| |||||||||||| || ||||||||||  ||||||||||||||||    
T  7943522 agatacatcaattattcaatgaatctaaaaagtcaatttttttcttataaataggaccggagggagta 7943589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 89
Target Start/End: Original strand, 21795034 - 21795065
Alignment:
Q  58 ttgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||||||||||||||||||||||||    
T  21795034 ttgtttcttataataaggaccggagggagtat 21795065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 27964328 - 27964277
Alignment:
Q  39 aatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||||||||||||| || ||||||| |  ||||||||||||||||    
T  27964328 aatgaacctaaaaagtcaatttttgcttataaaagtgaccggagggagtatt 27964277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 41824341 - 41824404
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagt 87  Q
    ||||||||||| |  ||||||||||||||||||||| || |||||| ||  |||||||||||||    
T  41824341 atacatcatttattgaatgaacctaaaaagtcaatttttacttatagtagtgaccggagggagt 41824404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 12873771 - 12873721
Alignment:
Q  39 aatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||| |||||||||||| | |||||||||| ||||| ||||||||||||    
T  12873771 aatgaatctaaaaagtcaactttttcttataaaaaggatcggagggagtat 12873721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 88
Target Start/End: Complemental strand, 16621900 - 16621870
Alignment:
Q  58 ttgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||||||||||||||||    
T  16621900 ttgtttcttataataaggaccggagggagta 16621870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 27311684 - 27311726
Alignment:
Q  46 ctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||| ||||||||||||| | |||||||||||||||||||    
T  27311684 ctaaaaaatcaattgtttcttgtgataaggaccggagggagta 27311726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 44283632 - 44283670
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataagga 76  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  44283632 caatgaatctaaaaagtcaattatttcttataataagga 44283670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 27306807 - 27306860
Alignment:
Q  37 acaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| |||| ||||| |||||||||||||||||||| || |||| ||||||||    
T  27306807 acaataaaccaaaaaaatcaattgtttcttataataatgatcggatggagtatt 27306860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 29988977 - 29989042
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||| | ||||||| | |||||||||| |||||||| |||  ||||| |||||||||||    
T  29988977 atacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttctaaataggactggagggagtat 29989042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 4063370 - 4063422
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||| | ||||||| ||||||||||||||   ||||||||||||||||||    
T  4063370 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtatt 4063422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 10204998 - 10205070
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    |||||||| ||| ||||||||||| ||||||||| | ||| |||||| | ||||||||||  |||| ||||||    
T  10204998 aaatatagactaaatacatcatttatacaatgaatcaaaagagtcaaatatttcttataaataggatcggagg 10205070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11724332 - 11724408
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtc-aattgtttcttataataagga 76  Q
    |||| ||||||||||||| ||||||| || | ||  ||||| || ||| |||||| |||||||||||||||||||||    
T  11724332 atctcgttataaatatagactagatatattacttacacaataaatctataaagtctaattgtttcttataataagga 11724408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23464582 - 23464522
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgt 61  Q
    ||||| || ||||||||| |||||||||||  || ||||||||||| ||||||| ||||||    
T  23464582 atcttattgtaaatatagactagatacatctcttatacaatgaaccaaaaaagttaattgt 23464522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 38983062 - 38982998
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||| | ||||||| | |||||||||| | ||| ||||||  ||||||||||||||||    
T  38983062 atacatcatttatgcaatgaatcaaaaaagtcaaatattttttataaataggaccggagggagta 38982998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45571101 - 45571029
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45571101 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45574768 - 45574696
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45574768 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45574696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45578435 - 45578363
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45578435 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45578363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45582102 - 45582030
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45582102 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45582030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45585769 - 45585697
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45585769 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45585697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45589436 - 45589364
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45589436 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45589364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45593103 - 45593031
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45593103 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45593031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45596770 - 45596698
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45596770 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45596698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45600437 - 45600365
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45600437 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45600365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45604104 - 45604032
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45604104 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45604032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45607771 - 45607699
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45607771 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45607699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45611438 - 45611366
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45611438 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45611366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 45615105 - 45615033
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| || |  |||||| ||||||||| |||| ||||||||||  ||||||||||| ||||    
T  45615105 taggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccggaggtagta 45615033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 534817 - 534746
Alignment:
Q  87 tatttgggatggtcactcaatagaccgttagattgctcacaggtccctcaacatatcggattgtaaatcccg 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  534817 tatttgggatggtcactcaatagaccgttagattgctcacaggtccctcaacatatcggattgtaactcccg 534746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 51590492 - 51590581
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||||||||||||| |||||||||||| ||  |||||||| |||||| ||||| | ||||||||||||||||||||||||||||||    
T  51590492 atcttgttataaatatagactagatacatcacttacacaatgaatctaaaaggtcaactttttcttataataaggaccggagggagtatt 51590581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 22182851 - 22182764
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||| ||||||||||| |||||||||||||| ||  ||||| || ||||||||||||||||| |||||||||||||||||||||||||    
T  22182851 atctcgttataaatatgggctagatacatcacttacacaataaatctaaaaagtcaattgttacttataataaggaccggagggagta 22182764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 13321776 - 13321865
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||||||||||||| |||||||||||| ||  | |||||| ||||||| |||| |||||||||||||||||||| |||||||||||    
T  13321776 atcttgttataaatatagactagatacatcacttacataatgaatctaaaaaatcaaatgtttcttataataaggaccagagggagtatt 13321865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 15699526 - 15699610
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggaggga 85  Q
    |||||||| ||||||||| |||||||||||| || |||||| |||||||||| ||||||||||| |||||||||||| |||||||    
T  15699526 atcttgttgtaaatatagactagatacatcacttatacaataaacctaaaaattcaattgtttcatataataaggacgggaggga 15699610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19998473 - 19998553
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccgga 81  Q
    |||||||| ||||||||| |||||||||||| ||  |||||||| ||||||| ||||||||||||||||||||||||||||    
T  19998473 atcttgttgtaaatatagactagatacatcacttacacaatgaatctaaaaattcaattgtttcttataataaggaccgga 19998553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 18038750 - 18038839
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||| ||||||||| |||  ||||||||||| ||  |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  18038750 atctcgttataaatgtagattagatacatcacttaaacaatgaatctaaaaagtcaaatgttttttataataaggaccggagggagtatt 18038839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34174972 - 34174884
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||  |||||||  ||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  34174972 atcttgttgcaaatataaactaaatacatcacttacacaatgaacctaaaaagtcaattgtttcttataataaggatcggatggagtat 34174884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48565589 - 48565677
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||| ||| ||||||||  |  ||||||||| |||||||| || | |||||||||||||||||||||||||||||    
T  48565589 atcttgttataaatatagactaaatacatcacctacacaatgaacttaaaaagttaactttttcttataataaggaccggagggagtat 48565677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 44224331 - 44224421
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||| || ||||||||| |||||||||||| |||||||||||||| ||||| | |||| ||| ||||||||||| ||||| |||||||||    
T  44224331 atcttattgtaaatatagtctagatacatcacttgtacaatgaaccaaaaaaattaattattttttataataagggccggacggagtattt 44224421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 45977180 - 45977098
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    ||||| || ||||||||| ||||||||||||  | |||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  45977180 atcttattgtaaatatagactagatacatcacctatacaataaaccaaaaaagttaattgtttcttataataaggaccggagg 45977098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 31050315 - 31050388
Alignment:
Q  4 ttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggac 77  Q
    ||||| ||||||||| ||| |||||||| ||  ||||| |||||||||||||||||||||||||||||||||||    
T  31050315 ttgttgtaaatatagactaaatacatcacttacacaataaacctaaaaagtcaattgtttcttataataaggac 31050388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 22182864 - 22182913
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagt 87  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  22182864 caatgaacttaaaaagtcaattgttgcttataataaggaccggagggagt 22182913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 25238674 - 25238723
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  25238674 atgaacctaaaaagtcaattgttttttataataaggacaggagggagtat 25238723  T

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Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 51590477 - 51590428
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  51590477 atgaaccaaaaaagtcaattgttttttataataaggaccggagggagtat 51590428  T

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Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 52279320 - 52279231
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| || ||||||||| || ||||||||| ||  |||||||||| ||||| ||||||| |||| |||||||||||| |||||||||||    
T  52279320 atcttattgtaaatatagacttgatacatcacttacacaatgaaccaaaaaaatcaattgcttctaataataaggaccagagggagtatt 52279231  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 27687927 - 27687839
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| || ||||||||| |||||||||||| ||  | |||||||  ||||| |||||| |||||||||||||| ||||||||||||||    
T  27687927 atcttattgtaaatatagactagatacatcacttacataatgaactaaaaaattcaattatttcttataataagaaccggagggagtat 27687839  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 37178982 - 37179061
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||| ||| ||||||||||| |||||| || | |||||||||| ||||||||||||| ||| ||||||| ||||||    
T  37178982 aaatatagactaaatacatcatttatacaataaatcaaaaaagtcaaatgtttcttataattagggccggaggaagtatt 37179061  T

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Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 26924298 - 26924364
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||| | ||||||| | |||||||||| ||||||||||||  ||||||||||||||||||    
T  26924298 atacatcatttattcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtatt 26924364  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 52030954 - 52030872
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    ||||| |||||||||||   ||||||||||| ||  || ||||| ||||||| |||||| |||||||||||||||||||||||    
T  52030954 atcttattataaatataaattagatacatcacttacacgatgaaactaaaaaatcaattttttcttataataaggaccggagg 52030872  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 18038737 - 18038684
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    |||||||||||||||||||| | |||||||||||||||||  ||||||||||||    
T  18038737 caatgaacctaaaaagtcaaatatttcttataataaggactagagggagtattt 18038684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 19998460 - 19998407
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    |||||||  |||||||||||  ||||||||||||||||||||||||||||||||    
T  19998460 caatgaatataaaaagtcaaaagtttcttataataaggaccggagggagtattt 19998407  T

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Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 29438210 - 29438287
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| |||||||||||| ||  |||||||||  ||||||||||||||||||||||| || || |||||| ||||    
T  29438210 aaatatagactagatacatcacttacacaatgaactaaaaaagtcaattgtttcttataacaatgagcggaggtagta 29438287  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 5966943 - 5967015
Alignment:
Q  7 ttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccg 79  Q
    ||||||||||||  ||||||||||| ||  ||||| |||||||||| | | ||||||||||||||||||||||    
T  5966943 ttataaatatagattagatacatcaattacacaataaacctaaaaaataatttgtttcttataataaggaccg 5967015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13320389 - 13320301
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| || |||||||||  || |||||||||||  ||||| |||  ||||| | ||||||||||||||||||| ||||||||||||||    
T  13320389 atcttattgtaaatatagtttaaatacatcatttacacaataaacaaaaaaaattaattgtttcttataataagaaccggagggagtat 13320301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13770771 - 13770859
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| || ||||||||| |||||||||||| ||  ||||| ||   ||||||| || |||||||||||||||| ||||||||||||||    
T  13770771 atcttattgtaaatatagactagatacatcacttacacaataaattaaaaaagtaaactgtttcttataataagaaccggagggagtat 13770859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 15699513 - 15699461
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||| ||||||| ||||  |||||||||||||||||||||||||||||||    
T  15699513 caatgaatctaaaaaatcaaaagtttcttataataaggaccggagggagtatt 15699461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43851035 - 43850947
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||   ||||||||||| ||  | ||| || ||||||||||||  |||||||||||||| ||||||||| |||||    
T  43851035 atcttgttataaatatatattagatacatcacttacataataaatctaaaaagtcaaaagtttcttataataaagaccggaggaagtat 43850947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 31050300 - 31050249
Alignment:
Q  37 acaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||||||||  ||||||||||||||||||| |||||||||    
T  31050300 acaatgaatctaaaaagtcaaaagtttcttataataaggaccagagggagta 31050249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 20486728 - 20486794
Alignment:
Q  10 taaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagga 76  Q
    ||||||||||||||||| |||| |   ||||| ||||||||||||||||| ||| ||||||||||||    
T  20486728 taaatataggctagatatatcactaacacaataaacctaaaaagtcaattattttttataataagga 20486794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 5966922 - 5966873
Alignment:
Q  39 aatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||||||| ||| |||||||| ||||||||| |||||||||||    
T  5966922 aatgaacctaaaaagccaactgtttcttgtaataaggatcggagggagta 5966873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 29892230 - 29892279
Alignment:
Q  39 aatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||| ||||||||||||||||||| |||||  ||||||||||||||||    
T  29892230 aatgaatctaaaaagtcaattgtttcctataaataggaccggagggagta 29892279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 519896 - 519832
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||| |||||| || | |||||||||| ||||| ||||||  ||||||||||||||||    
T  519896 atacatcatttatacaataaatcaaaaaagtcaaatgtttattataaataggaccggagggagta 519832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 52279335 - 52279383
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| |||||||||||| | |||||||||||||||| |||||||||||    
T  52279335 atgaatctaaaaagtcaactttttcttataataaggatcggagggagta 52279383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 44939129 - 44939070
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    ||||||||||| |||||||||   |||||||||| ||||||||||||  |||||||||||    
T  44939129 atacatcatttatacaatgaataaaaaaagtcaaatgtttcttataaataggaccggagg 44939070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 91
Target Start/End: Original strand, 9552689 - 9552731
Alignment:
Q  49 aaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    |||||| ||||||||||||||||||||| | ||||||||||||    
T  9552689 aaaagttaattgtttcttataataaggatcagagggagtattt 9552731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 9676010 - 9675960
Alignment:
Q  39 aatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||| |||| || |||||||||  |||||||||||||||    
T  9676010 aatgaacctaaaaagttaatttttacttataatagtgaccggagggagtat 9675960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 26760236 - 26760170
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||| | ||||||| | |||||||||| ||||||||||||  |||||| |||||| ||||    
T  26760236 atacatcatttattcaatgaatcaaaaaagtcaaatgtttcttataaataggacccgagggaatatt 26760170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 34332561 - 34332627
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||| | ||||||| | |||||||||| ||||||||||||  |||||| ||||| |||||    
T  34332561 atacatcatttatccaatgaatcaaaaaagtcaaatgtttcttataaataggaccagagggggtatt 34332627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 29043526 - 29043449
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||| |||| |||||| |  ||||||||||||||||  ||| || |||||||||| || |||||||||||    
T  29043526 aaatatagactaaatacgtcatttattgaatgaacctaaaaagttgatttttgcttataataatgagcggagggagta 29043449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 29064226 - 29064144
Alignment:
Q  10 taaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttctta---taataaggaccggagggagtatt 90  Q
    |||||||||  || ||||||||||| ||||||||| ||||||| | |||| |||||||   |||||||||| ||||||||||||    
T  29064226 taaatatagattaaatacatcatttatacaatgaatctaaaaaat-aattttttcttatagtaataaggacgggagggagtatt 29064144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 38040335 - 38040274
Alignment:
Q  28 atcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| | ||||||| | |||||||||| ||||||||||||  ||||||| |||||||||    
T  38040335 atcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccgaagggagtat 38040274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 50155397 - 50155450
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||||| |||||||||||| | ||||||||||  ||||||||||| |||||||    
T  50155397 caatgaatctaaaaagtcaactttttcttataaataggaccggaggaagtattt 50155450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 26760272 - 26760324
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||  |||||| |||||| ||||||||||  ||||||||||||||||||    
T  26760272 caatgaatttaaaaaatcaattttttcttataaataggaccggagggagtatt 26760324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 26924262 - 26924210
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||  ||||||||||| | ||||||||||  ||||||||||||||||||    
T  26924262 caatgaatttaaaaagtcaactttttcttataaataggaccggagggagtatt 26924210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 38834681 - 38834605
Alignment:
Q  13 atataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||| ||| ||||||||||| |  |||||| ||||||| | |||| || |||||||||  |||||||||||||||    
T  38834681 atatagactatatacatcatttatttaatgaatctaaaaaataaatttttgcttataatagtgaccggagggagtat 38834605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22618225 - 22618313
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||| ||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22618225 atcttgttgtaaatatagactagatacatcacttacacaatgaacctaaaaagtcaattgtttcttataataaggaccggagtgagtat 22618313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 47612352 - 47612441
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||| ||||||||||||| |||||||||| | || ||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  47612352 atctcgttataaatatagactagatacattacttatacaatgaacctaaaaagtcaattgctgcttataataaggaccggagggagtatt 47612441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40234852 - 40234765
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||||| |||||||||||| ||  |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  40234852 atcttgttgtaaatatagactagatacatcagttacacaatgaatctaaaaagtcaattgtttcttataataagaaccggagggagta 40234765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7456505 - 7456424
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggag 82  Q
    |||||||| ||||||||| ||||||||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||    
T  7456505 atcttgttgtaaatatagactagatacatcatttatacaatgaatctaaaaagtcaaatatttcttataataaggaccggag 7456424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 24164578 - 24164667
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||| |||||||| |||||||||||| ||  | ||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  24164578 atcttgttagaaatatagactagatacatcacttacataatgaacctaaaaagtcaaatgtttcttataataaggatcggagggagtatt 24164667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33901100 - 33901188
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||| |||||||||||||||  | |||||| |||||||||||| ||||||||||||||| ||||||||| |||||    
T  33901100 atcttgttataaatatagactagatacatcatttacataatgaatctaaaaagtcaaatgtttcttataataaagaccggaggaagtat 33901188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41487853 - 41487941
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| || ||||||||| |||||||||||| ||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  41487853 atcttattgtaaatatagactagatacatcacttacacaatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagtat 41487941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 10674185 - 10674269
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggaggga 85  Q
    ||||||||||||||||||  ||||||||||| ||  | |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  10674185 atcttgttataaatatagattagatacatcacttacataatgaatctaaaaagtcaattgtttcttataataaggatcggaggga 10674269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 29559518 - 29559436
Alignment:
Q  6 gttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||||| |||||||||| | ||  || ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  29559518 gttataaatatagactagatacattacttacacgatgaacctaaaaagtcaattgtttcttataataaggatcggaggtagta 29559436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 41088919 - 41088996
Alignment:
Q  6 gttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    ||||||||||||| |||||||||| | ||  || || |||||||||||||||||||||||||||||||||||||||||    
T  41088919 gttataaatatagactagatacattacttacacgattaacctaaaaagtcaattgtttcttataataaggaccggagg 41088996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3633277 - 3633197
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccgga 81  Q
    |||| ||||||||| ||| |||||||||||| ||  | ||||||||||||||||||| |||||||||||||||||||||||    
T  3633277 atctcgttataaatgtagactagatacatcacttaaataatgaacctaaaaagtcaaatgtttcttataataaggaccgga 3633197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 27320356 - 27320444
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| || ||||||||| ||||| |||| | || ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  27320356 atcttattgtaaatatagactagaaacattacttatacaatgaaccaaaaaaatcaattgtttcttataataaggaccagagggagtat 27320444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 41395748 - 41395660
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| |||||||||||| |||||||||||| || |||||||||   ||||||| ||||||||||||||||||||| |||| |||||||    
T  41395748 atcttattataaatatagactagatacatcacttatacaatgaattaaaaaagttaattgtttcttataataaggatcggaaggagtat 41395660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 45025656 - 45025744
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||| |||||||||||| ||  | |||||| ||||||| |||| ||||||||||||||| ||||||||| |||||    
T  45025656 atcttgttataaatatagactagatacatcacttacataatgaatctaaaaaatcaaatgtttcttataataaagaccggaggaagtat 45025744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 12806955 - 12806905
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  12806955 atgaacctaaaaagtcaactttttcttataataaggaccggagggagtatt 12806905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 41088901 - 41088851
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  41088901 caatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggagta 41088851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 41487838 - 41487788
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  41487838 atgaacctaaaaagtcaactttttcttataataaggaccggagggagtatt 41487788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 13860314 - 13860363
Alignment:
Q  36 tacaatgaacctaaaaagtcaattgtttcttataataaggaccggaggga 85  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  13860314 tacaatgaatctaaaaagtcaattgtttcttataataaggatcggaggga 13860363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 39413910 - 39413979
Alignment:
Q  21 tagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||| || |||||||||| |||||| |||||||||||||||||| ||||| ||| ||||||||    
T  39413910 tagatacatcacttatacaatgaacttaaaaaatcaattgtttcttataattaggactggaaggagtatt 39413979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 18064794 - 18064874
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    |||||||| |||||||||||| ||  |||||||||  |||| ||||| ||||||||||| ||||||||||| |||||||||    
T  18064794 aaatatagactagatacatcacttaaacaatgaactaaaaatgtcaactgtttcttatattaaggaccggatggagtattt 18064874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 40198651 - 40198603
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  40198651 atgaacctaaaaagtcaactttttcttataataaggaccggagggagta 40198603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 3633274 - 3633341
Alignment:
Q  22 agatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||| ||  ||||||||||||||||||||| | |||||||||||||||||| || |||||||    
T  3633274 agatacatcacttaaacaatgaacctaaaaagtcaaatatttcttataataaggaccagaaggagtat 3633341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 28677380 - 28677313
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||||||||| | ||||||| | |||||||||| ||||||||||||  |||||||||||||||||||    
T  28677380 atacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtattt 28677313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 47280259 - 47280173
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| || ||||||||| ||| |||||| |||| ||||||||||  ||||||| |||||||||||||||||| || |||||||||||    
T  47280259 atcttattgtaaatatagactaaatacattatttatacaatgaaca-aaaaagttaattgtttcttataataaagatcggagggagta 47280173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 10674172 - 10674122
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||||||    
T  10674172 caatgaacctaaaaagtcaaatgttttttataataagtaccggagggagta 10674122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 33039642 - 33039572
Alignment:
Q  5 tgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagg 75  Q
    |||| ||||||||| |||||||||||  |   |||||||||||||||||||||||||||||| ||||||||    
T  33039642 tgttgtaaatatagactagatacatccctaacacaatgaacctaaaaagtcaattgtttcttttaataagg 33039572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 36245439 - 36245373
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||| | ||||||| | |||||||||| ||||||||||||  ||||||||||||||||||    
T  36245439 atacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaacaggaccggagggagtatt 36245373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 47612339 - 47612289
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||||||||    
T  47612339 caatgaacctaaaaagtcatttgttgctaataataaggaccggagggagta 47612289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 24164563 - 24164518
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggaggga 85  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  24164563 atgaaccaaaaaaatcaattgtttcttataataaggaccggaggga 24164518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 24932430 - 24932381
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| |||||    
T  24932430 atgaacctaaaaagtcaattttttcttataataaggaccgaaggaagtat 24932381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 28248480 - 28248427
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||||| |||||| |||||||||||||||||||||||||  ||||||||||||    
T  28248480 caatgaatctaaaatgtcaattgtttcttataataaggactcgagggagtattt 28248427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 31903028 - 31902963
Alignment:
Q  9 ataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataag 74  Q
    |||||||||| |||||||||||||||  | ||| ||| |||||||||| |||||||||||||||||    
T  31903028 ataaatatagactagatacatcatttacataataaacttaaaaagtcagttgtttcttataataag 31902963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 45025641 - 45025592
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  45025641 atgaaccaaaaaaatcaattgtttcttataataaggaccggagtgagtat 45025592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 13860300 - 13860229
Alignment:
Q  4 ttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagga 76  Q
    ||||||||||||||| |||||||||||| ||  ||||| ||| |||||||| || ||||||||||||||||||    
T  13860300 ttgttataaatatagactagatacatca-ttacacaataaacttaaaaagtaaaatgtttcttataataagga 13860229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 24932454 - 24932518
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| || ||||||||||  ||||||| |||||| |||||||||||||| |||||||||||    
T  24932454 atacatcacttatacaatgaactaaaaaagttaattgtctcttataataaggatcggagggagta 24932518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 45123307 - 45123379
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataa 73  Q
    ||||| ||||||||||||  ||||||||||| || ||||||||| | ||||||| |||| |||||||||||||    
T  45123307 atcttattataaatatagattagatacatcacttatacaatgaatcaaaaaagttaattatttcttataataa 45123379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 47484107 - 47484027
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccgga 81  Q
    ||||| || ||||||||| |||||||||||| ||   |||||||   ||||| ||||||||||||||||||||||||||||    
T  47484107 atcttattgtaaatatagactagatacatcacttacgcaatgaataaaaaaaatcaattgtttcttataataaggaccgga 47484027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 10007659 - 10007725
Alignment:
Q  22 agatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| | || ||||||||| |||||||||||| | ||||||||||  ||||||||||||||||    
T  10007659 agatacattaattatacaatgaatctaaaaagtcaactttttcttataaataggaccggagggagta 10007725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 28248493 - 28248584
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtac----aatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||| ||||||||||||| ||| |||||||| ||  ||    |||||||||||||||| ||||||||||| |||||| ||||||||| ||||    
T  28248493 atctcgttataaatatagactatatacatcacttacacaattaatgaacctaaaaagttaattgtttcttgtaataatgaccggaggaagta 28248584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 11668074 - 11668013
Alignment:
Q  28 atcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| | ||||||| | |||||||||| ||||||||||||  |||||||||||||||||    
T  11668074 atcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtat 11668013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 47484122 - 47484171
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||| | || |||||||||||||| |||||||||||    
T  47484122 atgaacctaaaaagtcaacttttacttataataaggacaggagggagtat 47484171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14543330 - 14543414
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggaggga 85  Q
    |||||| | ||||||||| |||||||||||| ||  | ||| ||| |||| | ||||||||||||||||||||||| || |||||    
T  14543330 atcttgatgtaaatatagactagatacatcacttacataataaacttaaacaatcaattgtttcttataataaggatcgaaggga 14543414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 27320341 - 27320293
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||| ||||||||||| | ||||||||||||||||| ||||||||||    
T  27320341 atgaacttaaaaagtcaactttttcttataataaggacgggagggagta 27320293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 29559536 - 29559576
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggacc 78  Q
    ||||||| ||||||||||||||||||||| |||||||||||    
T  29559536 caatgaatctaaaaagtcaattgtttcttgtaataaggacc 29559576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 33901077 - 33901037
Alignment:
Q  48 aaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  33901077 aaaaaatcaattgtttcttataataaggacaggagggagta 33901037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 37006533 - 37006465
Alignment:
Q  10 taaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggacc 78  Q
    ||||||||  || ||||||||| || |||||| |||  |||||||||||||||||||||||||| ||||    
T  37006533 taaatataaactggatacatcacttatacaataaactaaaaaagtcaattgtttcttataataacgacc 37006465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 2400028 - 2399969
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataa 70  Q
    ||||||||  || ||||||||||| ||||||||| | |||||||||| ||||||||||||    
T  2400028 aaatatagattaaatacatcatttatacaatgaatcaaaaaagtcaaatgtttcttataa 2399969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 2523869 - 2523920
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| |||||||||||| | ||||||||||  |||||||||||||||||    
T  2523869 caatgaatctaaaaagtcaactttttcttataaataggaccggagggagtat 2523920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 36245475 - 36245525
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||| |||||||||||||| ||||||||||  ||||| ||||||||||    
T  36245475 caatgaatctaaaaagtcaattttttcttataaataggacaggagggagta 36245525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 39153362 - 39153304
Alignment:
Q  12 aatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataa 70  Q
    ||||||| ||| ||||||||||| | ||||||| | |||||||||| ||||||||||||    
T  39153362 aatatagactaaatacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataa 39153304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 40599998 - 40600064
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||| ||  |||||||||||||||||| ||||||| |||||||||| || ||||  |||||||    
T  40599998 atacatcacttacacaatgaacctaaaaagttaattgttgcttataataaagatcggaaagagtatt 40600064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 41850681 - 41850747
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||| | ||||||| | ||||||| || ||||||||||||  ||||||||| ||||||||    
T  41850681 atacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggaccggatggagtatt 41850747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 81
Target Start/End: Complemental strand, 19372765 - 19372732
Alignment:
Q  48 aaaaagtcaattgtttcttataataaggaccgga 81  Q
    ||||||||||||||||||||||||||||| ||||    
T  19372765 aaaaagtcaattgtttcttataataaggatcgga 19372732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 33039666 - 33039711
Alignment:
Q  43 aacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||||| |||| |||||||| || ||||||||    
T  33039666 aacctaaaaagtcaattgttccttaaaataaggaacgaagggagta 33039711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 34840673 - 34840608
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||| |  |||||| ||||||||| || | || |||||||||| |||||||||||||||    
T  34840673 atacatcatttattgaatgaatctaaaaagtgaacttttgcttataataatgaccggagggagtat 34840608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 38940264 - 38940215
Alignment:
Q  39 aatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||| |||||| ||||||| || |||||||||| ||||||||||||||    
T  38940264 aatgaatctaaaatgtcaatttttgcttataataatgaccggagggagta 38940215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 4826860 - 4826912
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||| | ||||||| ||||||||||||||   ||||||||||||||||||    
T  4826860 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtatt 4826912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 18064769 - 18064721
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||| |||||||| || | ||||||||| ||||||||||||||||||    
T  18064769 atgaacttaaaaagttaactttttcttatattaaggaccggagggagta 18064721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 35100346 - 35100382
Alignment:
Q  37 acaatgaacctaaaaagtcaattgtttcttataataa 73  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  35100346 acaatgaacttaaaaactcaattgtttcttataataa 35100382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 2913400 - 2913484
Alignment:
Q  6 gttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||||| |||||||||| | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2913400 gttataaatatagactagatacattacttatacaatgaacctaaaaagtcaattgttgcttataataaggaccggagggagtatt 2913484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 23916189 - 23916276
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||| |||||||||||||  |||||| ||||  |  |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23916189 atctcgttataaatatagattagatatatcacatacacaatgaatctaaaaagtcaattgtttcttataataaggaccggagggagta 23916276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9343182 - 9343269
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||| |||||||||| ||||  ||||| ||  | |||||||||||||||| |||||||||||||||| ||||||    
T  9343182 atcttgttataaatatagactagatacattatttacacaataaatttgaaaagtcaattgtttcctataataaggaccggaaggagta 9343269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8265034 - 8265116
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    |||||||||||||||||| |||||||||||| ||  ||||||||| |||||| |||| | |||||||||||||||| ||||||    
T  8265034 atcttgttataaatatagactagatacatcacttacacaatgaacttaaaaaatcaactttttcttataataaggaacggagg 8265116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 30438814 - 30438892
Alignment:
Q  10 taaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||| |||||||||||| || |||||| |||| ||||||| |||| |||||||||||||||| |||||||||||    
T  30438814 taaatatagactagatacatcacttatacaataaaccaaaaaagttaattatttcttataataaggatcggagggagta 30438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 28605656 - 28605568
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| || |||||||||  || |||||||| ||  |||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  28605656 atcttattgtaaatatagtttaaatacatcacttacacaatgaaccaaaaaagttaattgtttcttataataaggaccagagggagtat 28605568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 2913382 - 2913331
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||||||||||    
T  2913382 caatgaatctaaaaagtcaaatgttgcttataataaggaccggagggagtat 2913331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 10145301 - 10145212
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| || ||||||||| |||||||||||| || ||  ||||| | ||||| |||||| |||||||||||||||| ||||||| |||||    
T  10145301 atcttattgtaaatatagactagatacatcacttatatgatgaatcaaaaaaatcaattatttcttataataaggatcggagggggtatt 10145212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 12240168 - 12240237
Alignment:
Q  7 ttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagga 76  Q
    |||||||||||   ||||||||||||||  |||||||||||||||| |||||| |||||| |||||||||    
T  12240168 ttataaatataaattagatacatcatttacacaatgaacctaaaaaatcaattatttcttgtaataagga 12240237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 359647 - 359683
Alignment:
Q  41 tgaacctaaaaagtcaattgtttcttataataaggac 77  Q
    |||||||||||||||||||||||||||||||||||||    
T  359647 tgaacctaaaaagtcaattgtttcttataataaggac 359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 12217577 - 12217489
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaag-tcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| || ||||||||| |||||||||||| || |||||| |||| |||||  |||||||||| |||||||||||| |||||| ||||    
T  12217577 atcttattgtaaatatagactagatacatcacttatacaataaaccaaaaaaaatcaattgttttttataataaggatcggaggaagta 12217489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26484370 - 26484288
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggaggg 84  Q
    |||||||||||||||||| ||| |||||||||||  ||||  ||  ||||||||| ||||||||||||||||| | ||||||||    
T  26484370 atcttgttataaatatagactacatacatcatttacacaacaaatataaaaagtc-attgtttcttataataacggccggaggg 26484288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 31632188 - 31632255
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||||||||| |  ||||||||||||||||||| | || |||||||||  |||||||||||||||||    
T  31632188 atacatcatttattaaatgaacctaaaaagtcaacttttacttataatagtgaccggagggagtattt 31632255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 12605649 - 12605607
Alignment:
Q  48 aaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| ||||||||||||||||||||||| |||||||||||||    
T  12605649 aaaaaatcaattgtttcttataataaggaacggagggagtatt 12605607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 359631 - 359542
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattg-tttcttat-aataaggaccggagggagta 88  Q
    |||| |||||||||||||  ||||||||||| ||  ||||||||| |||||| ||||||| ||| |||| ||||||||| ||||||||||    
T  359631 atctcgttataaatatagattagatacatcacttacacaatgaacataaaaaatcaattgtttttttataaataaggacaggagggagta 359542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 10145316 - 10145364
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||||| ||| ||||||||| ||||| ||||||||    
T  10145316 atgaacctaaaaagtcaatttttttttataataaagaccgaagggagta 10145364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 17265796 - 17265716
Alignment:
Q  12 aatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatttg 92  Q
    ||||||| ||| |||| |||||| | ||||||| | |||||||||| ||||||||||||  |||| |||| ||||||||||    
T  17265796 aatatagactaaatacgtcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggatcggaaggagtatttg 17265716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 24986017 - 24986069
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagga 76  Q
    |||||||| || | ||||||||||||||||| |||||| ||||||||||||||    
T  24986017 atacatcaattatccaatgaacctaaaaagtgaattgtctcttataataagga 24986069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29284584 - 29284529
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtca 56  Q
    |||| ||||||||||||| |||||||||||| ||  | ||||||||||||||||||    
T  29284584 atctcgttataaatatagactagatacatcacttacataatgaacctaaaaagtca 29284529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 8029579 - 8029509
Alignment:
Q  13 atataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    |||||| ||| ||||||||||| | |||||||  ||||| || | |||||||||||||||| |||||||||    
T  8029579 atatagtctaaatacatcatttattcaatgaatttaaaatgtgatttgtttcttataataatgaccggagg 8029509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 17599552 - 17599606
Alignment:
Q  36 tacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||| | |||||||||||| ||| || |||||||||||| ||||||||||    
T  17599552 tacaatgaatcaaaaaagtcaattatttattgtaataaggaccgaagggagtatt 17599606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 28630838 - 28630884
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataa 70  Q
    |||||| |||| | ||||||| |||||||||||||||||||||||||    
T  28630838 atacataatttatgcaatgaatctaaaaagtcaattgtttcttataa 28630884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 30438790 - 30438740
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| |||||||||||| | |||||||||||||||| || ||||||||||    
T  30438790 atgaatctaaaaagtcaactttttcttataataaggatcgaagggagtatt 30438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 12605711 - 12605756
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggaggga 85  Q
    |||||||||||| ||||| | ||||||||||||| |||||||||||    
T  12605711 atgaacctaaaatgtcaactttttcttataataaagaccggaggga 12605756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 17598151 - 17598110
Alignment:
Q  47 taaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||||| |||||||||| |||||||||||| ||||    
T  17598151 taaaaagtcaattttttcttataagaaggaccggaggaagta 17598110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 33119980 - 33119903
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| | | ||||| ||||| ||||||||| | || ||||||| ||||||||||||  ||||||| ||||||||    
T  33119980 aaatatagaccaaatacaacatttatacaatgaatcaaagaagtcaaatgtttcttataaataggaccgaagggagta 33119903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31376261 - 31376171
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||| |||||||||||| |||||||||||| ||  | ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31376261 atcttcttataaatatagactagatacatcacttacataatgaacctaaaaagtcaaatgtttcttataataaggaccggagggagtattt 31376171  T

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Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 39616997 - 39616910
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||| |||||||||||| ||  | ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  39616997 atcttgttataaatatagactagatacatcacttacataatgaaccttaaaagtcaaatgtttcttataataaggaccggagggagta 39616910  T

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Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 53703792 - 53703881
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaa-ttgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||| |||||||||||| ||  ||||||||||||||| ||||| || |||||||||||||||||||||||||||||    
T  53703792 atcttgttataaatatagactagatacatcacttacacaatgaacctaaaaggtcaacttttttcttataataaggaccggagggagtat 53703881  T

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Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 2544520 - 2544612
Alignment:
Q  1 atcttgttataaat-ataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatttg 92  Q
    |||||||||||||| |||| | | |||||||| || ||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2544520 atcttgttataaattatagaccaaatacatcacttatacaatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggagcatttg 2544612  T

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Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 2544486 - 2544436
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2544486 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 2544436  T

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Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 50100280 - 50100206
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagg 75  Q
    ||||| |||||||||||| |||||||||||| || ||||||||||  ||||||||||||||||||||||||||||    
T  50100280 atcttattataaatatagactagatacatcacttatacaatgaactaaaaaagtcaattgtttcttataataagg 50100206  T

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Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 43901653 - 43901730
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| |||| ||||||||||  |||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  43901653 aaatatagactaggtacatcatttacacaatgaaccaaaaaagttaattgtttcttataataaggaccggaggtagta 43901730  T

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Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 53284378 - 53284467
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| || ||||| ||| |||||||||||| || |||||| |||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  53284378 atcttattgtaaatgtagactagatacatcacttatacaataaaccaaaaaaatcaattgtttcttataataaggaccggaggaagtatt 53284467  T

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Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8769196 - 8769283
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||||||||||  ||||||||||| ||  ||||||||| |||||||| || | |||||||||||||||||||||||||||||    
T  8769196 atcttgttataaatatagattagatacatcacttacacaatgaacttaaaaagttaact-tttcttataataaggaccggagggagtat 8769283  T

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Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 27302156 - 27302076
Alignment:
Q  10 taaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||| |||||||||||| || ||||||||||| ||||||| |||| ||||||||||||| |||||||| |||||||    
T  27302156 taaatatagactagatacatcacttatacaatgaaccaaaaaagttaattctttcttataataaagaccggagagagtatt 27302076  T

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Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 48643685 - 48643609
Alignment:
Q  6 gttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggag 82  Q
    ||||||||||||| |||||||||| | ||  || || ||||||||||||||||||||||||||||||||||||||||    
T  48643685 gttataaatatagactagatacattacttacacgattaacctaaaaagtcaattgtttcttataataaggaccggag 48643609  T

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Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 53703777 - 53703725
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatttg 92  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  53703777 atgaaccaaaaaagtcaattgtttcttataataaggaccggagggagtatttg 53703725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 45113820 - 45113733
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| || ||||||||| |||||||||||| ||  |||||||||| ||||| ||||||||||||||||||||||| | |||||||||    
T  45113820 atcttattgtaaatatagactagatacatcacttacacaatgaaccaaaaaaatcaattgtttcttataataaggatcagagggagta 45113733  T

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Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 19899682 - 19899756
Alignment:
Q  8 tataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggag 82  Q
    |||| |||||| |||||||||||||||  |||||||||||| | |||||||||||| ||||||||||||||||||    
T  19899682 tatatatatagactagatacatcatttacacaatgaacctatagagtcaattgttttttataataaggaccggag 19899756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16123818 - 16123907
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| || ||||||||| |||||||||| | || ||||||||||| ||||||| |||||||| ||||||||||||||| | ||||||||    
T  16123818 atcttattgtaaatatagactagatacattacttatacaatgaaccaaaaaagttaattgttttttataataaggaccgaacggagtatt 16123907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 25313364 - 25313275
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||| ||||||||||||| ||| |||||||| ||  |||||||||||||||| |||||| ||| ||||||||||||||| || |||||||    
T  25313364 atctcgttataaatatagactaaatacatcacttacacaatgaacctaaaaaatcaattattttttataataaggaccgaagagagtatt 25313275  T

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Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 42896207 - 42896140
Alignment:
Q  22 agatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||| || | ||||||||||||||||| ||||| |||||||||||| |||||||||||||||    
T  42896207 agatacatcagttattcaatgaacctaaaaagtgaattgcttcttataataaagaccggagggagtat 42896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 44118266 - 44118187
Alignment:
Q  4 ttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    ||||||||||||||| |||||||||||||||  |||||||| |||||||||||| | |||| ||||||||  ||||||||    
T  44118266 ttgttataaatatagactagatacatcatttacacaatgaatctaaaaagtcaaatatttcctataataaaaaccggagg 44118187  T

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Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 39617012 - 39617062
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  39617012 atgaaccaaaaaagtcaattgtttcttgtaataaggaccggagggagtatt 39617062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 19227409 - 19227458
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  19227409 atgaaccaaaaaaatcaattgtttcttataataaggaccggagggagtat 19227458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 31376276 - 31376325
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  31376276 atgaaccaaaaaagtcaattgtttcttgtaataaggaccggagggagtat 31376325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 45113835 - 45113884
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||    
T  45113835 atgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 45113884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 51517042 - 51517107
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||| | ||||||||| |||||||||| ||||||||||||  |||||||||||||||||    
T  51517042 atacatcatttatgcaatgaaccaaaaaagtcaaatgtttcttataaataggaccggagggagtat 51517107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8764294 - 8764381
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||||||||||  ||||||||||| ||  ||||| ||| |||||| |||| | |||||||||||||||| ||||||||||||    
T  8764294 atcttgttataaatatagattagatacatcacttacacaataaacttaaaaaatcaact-tttcttataataaggatcggagggagtat 8764381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19227394 - 19227326
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttata 69  Q
    |||||||||||||||||| |||||||||||||||  | ||| ||| ||||||||||| |||||||||||    
T  19227394 atcttgttataaatatagactagatacatcatttacataataaacttaaaaagtcaaatgtttcttata 19227326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48346536 - 48346448
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||||| |||||||||||| ||  | ||| ||| |||||||||||  |||| |||||||||| || |||||||||||    
T  48346536 atcttgttataaatatagactagatacatcacttacataataaacttaaaaagtcaaaagttttttataataagaacgggagggagtat 48346448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 28406566 - 28406617
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  28406566 caatgaacctaaaaagtcaattgtttcttgtaaataggaccggagggagtat 28406617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 50660015 - 50659948
Alignment:
Q  21 tagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||| ||  |||||||||| ||||| |||||||||||| |||||||||||| |||||||||    
T  50660015 tagatacatcacttacacaatgaaccaaaaaaatcaattgtttctaataataaggaccagagggagta 50659948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 42896227 - 42896293
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||| || | |||||||| |||||||| ||||||||||||||||||||||| || ||||||||    
T  42896227 atacatcagttattcaatgaacgtaaaaagtgaattgtttcttataataaggaccagaaggagtatt 42896293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 44118283 - 44118333
Alignment:
Q  39 aatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| |||||    
T  44118283 aatgaatctaaaaagtcaattgtttcttataataaggaccagaggaagtat 44118333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 48643703 - 48643753
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  48643703 caatgaatctaaaaagtcaattgtttcttgtaataaggactggagggagta 48643753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 21944336 - 21944295
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccgga 81  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  21944336 atgaacctaaaaagtcaattttttcttataataaggaccgga 21944295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 8266318 - 8266382
Alignment:
Q  26 acatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||| |||| ||||||||| | |||||||||| ||||||||||||  ||||||||||||||||||    
T  8266318 acattatttatacaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtatt 8266382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 14197801 - 14197852
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| |||||||||||||||||||||| ||| ||||| |||||||||||    
T  14197801 caatgaatctaaaaagtcaattgtttcttaaaattaggactggagggagtat 14197852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 27330082 - 27330036
Alignment:
Q  43 aacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||    
T  27330082 aacctaaaaagtcaaaagtttcttataataaggatcggagggagtat 27330036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 53441970 - 53441904
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||| | ||||||| | ||||||| || ||||||||||||  ||||||||||||||||||    
T  53441970 atacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggaccggagggagtatt 53441904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27363247 - 27363170
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggacc 78  Q
    ||||||||||||||||||  ||||||||||| ||  | | |||| ||||||| ||||  |||||||||||||||||||    
T  27363247 atcttgttataaatatagattagatacatcacttacatattgaatctaaaaaatcaaaagtttcttataataaggacc 27363170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36191539 - 36191616
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggacc 78  Q
    ||||||||||| |||||| |||||||||||| ||  | |||||||||||||  |||| |  |||||||||||||||||    
T  36191539 atcttgttatatatatagactagatacatcacttacataatgaacctaaaagatcaaataattcttataataaggacc 36191616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 21662935 - 21662883
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||| |||||||||||| | ||||||||||  ||||||||||||||||||    
T  21662935 caatgaatctaaaaagtcaactttttcttataaataggaccggagggagtatt 21662883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 27302180 - 27302228
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||||||||||||| | ||||||||||||| ||||||||| ||||    
T  27302180 atgaacctaaaaagtcaactttttcttataataaagaccggaggaagta 27302228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 28406508 - 28406464
Alignment:
Q  46 ctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||    
T  28406508 ctaaaaagtcaattgtttcttgtaaataggaccggagggagtatt 28406464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 36191521 - 36191485
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataagga 76  Q
    ||||||| |||||||||||||||||||||||||||||    
T  36191521 atgaaccaaaaaagtcaattgtttcttataataagga 36191485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 16123795 - 16123756
Alignment:
Q  49 aaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  16123795 aaaagtcaattttttcttataataaggaccggaggaagta 16123756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 25313641 - 25313684
Alignment:
Q  39 aatgaacctaaaaagtcaattgtttcttataataaggaccggag 82  Q
    ||||||| ||||||||||||||||||||||||||| || |||||    
T  25313641 aatgaacttaaaaagtcaattgtttcttataataaagatcggag 25313684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 89
Target Start/End: Original strand, 50660045 - 50660088
Alignment:
Q  46 ctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||||| | |||||||||||||||||||||| ||||||    
T  50660045 ctaaaaagtcaactttttcttataataaggaccggagagagtat 50660088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 4190699 - 4190621
Alignment:
Q  13 atataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    |||||||||| |||||| |||| |  |||||| ||||||| | |||| ||||||||||||  ||||||||| |||||||    
T  4190699 atataggctacatacataatttattgaatgaaactaaaaaatgaattttttcttataatagtgaccggaggaagtattt 4190621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 13622563 - 13622486
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| | | ||| ||||||| | ||||||||  |||||||||| ||||||||||||  |||||||| |||||||    
T  13622563 aaatatagaccaaatatatcatttatgcaatgaactaaaaaagtcaaatgtttcttataaataggaccggtgggagta 13622486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 43343532 - 43343577
Alignment:
Q  25 tacatcatttgtacaatgaacctaaaaagtcaattgtttcttataa 70  Q
    |||||||||| ||||||||| | |||||||||| ||||||||||||    
T  43343532 tacatcatttatacaatgaatcaaaaaagtcaaatgtttcttataa 43343577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 43449043 - 43449108
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||| ||||||||||| ||||| |||| | ||||||||||  |||| || |||||||||    
T  43449043 atacatcatttatacaatgaaccaaaaaaatcaaatatttcttataaataggatcgaagggagtat 43449108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 46220406 - 46220365
Alignment:
Q  47 taaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||| |||||| ||||||||||||||||||||| ||||||    
T  46220406 taaaaaatcaattttttcttataataaggaccggatggagta 46220365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 48346550 - 48346599
Alignment:
Q  39 aatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||| ||||||||| ||  ||||||||||||||||| |||||||||||    
T  48346550 aatgaatctaaaaagtaaaaagtttcttataataaggatcggagggagta 48346599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 12064972 - 12064908
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||  | ||||||| | ||||||| || ||||||||||||  ||||||||||||||||    
T  12064972 atacatcattaatgcaatgaatcaaaaaagtaaaatgtttcttataagtaggaccggagggagta 12064908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 21662971 - 21663035
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||| | ||||||| | ||||||| || ||||||||||||  | ||||||||||||||    
T  21662971 atacatcatttatgcaatgaatcaaaaaagttaaatgtttcttataaataagaccggagggagta 21663035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 39964366 - 39964290
Alignment:
Q  12 aatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||| ||| |||||| |||| | ||||||| |||||||||   || || |||||||||| ||||||||||||||    
T  39964366 aatatagactacatacataatttattcaatgaatctaaaaagtagttttttgcttataataatgaccggagggagta 39964290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26672 - 26584
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||| ||||||||| |||||||||||| ||  | ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  26672 atcttgttgtaaatatagactagatacatcacttacataatgaacctaaaaagtcaatcctttcttataataaggaccggagggagtat 26584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 26685 - 26736
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| ||||||| ||||  ||||||||||||||||||||||||||||||    
T  26685 caatgaatctaaaaaatcaaaagtttcttataataaggaccggagggagtat 26736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3871 - 3944
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataag 74  Q
    |||| ||||||||||||| |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  3871 atctcgttataaatatagactagatacatcacttacacaatgaacctaaaaagtcaattgtttcttataataag 3944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 3858 - 3807
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  3858 caatgaatcaaaaaagtcaattgtttcttataataaggaccggagggagtat 3807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 73850 - 73782
Alignment:
Q  21 tagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||||||  |||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  73850 tagatacatcatttacacaatgaatctaaaaagtcaattgttttttataataaggaccggagggagtat 73782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 13932523 - 13932610
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||| |||||||||| || |||||||||||| ||  ||| ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  13932523 atctcgttataaatagagactagatacatcacttacacagtgaacctaaaaagtcaattatttcttataataaggaccagagggagta 13932610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 29874393 - 29874314
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||| |||||||||||| ||  |||||||||| |||||||||||||||||||||| |||| |||||||||||||||    
T  29874393 aaatatagactagatacatcacttaaacaatgaaccaaaaaagtcaattgtttcttatattaagaaccggagggagtatt 29874314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 29002818 - 29002741
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| |||||||||||| ||  |||||||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  29002818 aaatatagactagatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataacaaggatcggagggagta 29002741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20502149 - 20502233
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggaggga 85  Q
    ||||| || ||||||||| |||||||||||| ||  |||||||||| ||||| | ||||||||||||||||||||||||||||||    
T  20502149 atcttattgtaaatatagactagatacatcacttacacaatgaaccaaaaaaattaattgtttcttataataaggaccggaggga 20502233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 33247378 - 33247290
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| || ||||||||| ||||||| |||| || || |||||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  33247378 atcttattgtaaatatagactagatatatcacttatagaatgaaccaaaaaagttaattgtctcttataataaggaccggagggagtat 33247290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 7537092 - 7537171
Alignment:
Q  10 taaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||  |||||||||||| ||  |||||||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  7537092 taaatatatactagatacatcacttacacaatgaaccaaaaaaatcaattgttttttataataaggaccggagggagtat 7537171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 8680639 - 8680690
Alignment:
Q  37 acaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8680639 acaatgaacctaaaaagtcaaatgtttcttataataaggaccggagggagta 8680690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 38978804 - 38978891
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| || ||||||||| |||||||||||| ||  |||||||||| ||||| | ||||||||||||||||||||| |||||||||||    
T  38978804 atcttattgtaaatatagactagatacatcacttacacaatgaaccaaaaaaattaattgtttcttataataaggatcggagggagta 38978891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5355613 - 5355702
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| || ||||||||  ||| |||||||| ||  |||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  5355613 atcttattgtaaatataaactaaatacatcacttacacaatgaactaaaaaagtcaactgtttcttataataaggaccggagggagtatt 5355702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 29451955 - 29452043
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||| || ||||||||  |||||||||||| ||  |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  29451955 atcttattgtaaatatatactagatacatcacttacacaatgaaccaaaaaa-tcaattgtttcttataataaggatcggagggagtatt 29452043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 73883 - 73934
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  73883 caatgaacctgaaaagtcaattgtttcttataataaagaccggagggagtat 73934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 32455225 - 32455137
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||| || ||||||||| |||||||||||| ||  |||||||| | ||||||||||||  ||||||||| ||||||||||||||||||||    
T  32455225 atcttattgtaaatatagactagatacatcacttccacaatgaatcaaaaaagtcaatt--ttcttataacaaggaccggagggagtattt 32455137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13278948 - 13279030
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    |||| ||||||||||||   ||||||||||| ||  ||||| || |||||||||||| |||||||||||||||||||||||||    
T  13278948 atctcgttataaatataaattagatacatcacttacacaataaatctaaaaagtcaactgtttcttataataaggaccggagg 13279030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 13932510 - 13932460
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  13932510 caatgaacataaaaagtcaattgtttcttataacaaggaccggagggagta 13932460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30132885 - 30132937
Alignment:
Q  36 tacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||||||||||    
T  30132885 tacaatgaatcaaaaaagttaattgtttcttataataaggaccggagggagta 30132937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 24173496 - 24173418
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||  ||||||||||| ||  |||||||||  ||||| |||||| ||||||||||||||||| |||||||||||    
T  24173496 aaatatagattagatacatcacttacacaatgaactaaaaaaatcaattatttcttataataaggactggagggagtat 24173418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 19211329 - 19211276
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    |||||||  |||||||||||  ||||||||||||||||||||||||||||||||    
T  19211329 caatgaatataaaaagtcaaaagtttcttataataaggaccggagggagtattt 19211276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 30132883 - 30132838
Alignment:
Q  46 ctaaaaagtcaattgtttcttataataaggaccggagggagtattt 91  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||    
T  30132883 ctaaaaagttaattttttcttataataaggaccggagggagtattt 30132838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 33478180 - 33478257
Alignment:
Q  12 aatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||| | ||||||||||| | ||||||| | |||| ||||| ||||||||||||  |||||||||||||||||    
T  33478180 aatataggccaaatacatcatttatgcaatgaatcaaaaatgtcaaatgtttcttataaataggaccggagggagtat 33478257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35204985 - 35205057
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataa 73  Q
    ||||| || ||||||||| |||||||||||  ||  |||||||||  ||||||||||||||||||||||||||    
T  35204985 atcttattgtaaatatagtctagatacatcccttacacaatgaactaaaaaagtcaattgtttcttataataa 35205057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35212174 - 35212102
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataa 73  Q
    ||||| || ||||||||| |||||||||||  ||  |||||||||  ||||||||||||||||||||||||||    
T  35212174 atcttattgtaaatatagtctagatacatcccttacacaatgaactaaaaaagtcaattgtttcttataataa 35212102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 7537065 - 7537018
Alignment:
Q  43 aacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  7537065 aacctaagaagtcaattttttcttataataagaaccggagggagtatt 7537018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 10228141 - 10228216
Alignment:
Q  13 atataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||| | ||||||||||||| ||||||||| | |||||||||| ||||||| ||||  | ||||||||||||||    
T  10228141 atatagacgagatacatcatttatacaatgaatcaaaaaagtcaaatgtttctaataaataagaccggagggagta 10228216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 29299442 - 29299509
Alignment:
Q  24 atacatcatttgtacaatgaac-ctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||| |||||||||  | |||||||||| ||||||||||||  ||||||||||||||||||    
T  29299442 atacatcatttatacaatgaattcaaaaaagtcaaatgtttcttataactaggaccggagggagtatt 29299509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 13789795 - 13789729
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||||| | ||||||| | ||||||| || ||||||||||||  ||||||||||||||||||    
T  13789795 atacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggaccggagggagtatt 13789729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 33247392 - 33247442
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||||||||||||| | |||||||||| |||||||||||| ||||||    
T  33247392 atgaacctaaaaagtcaactttttcttataacaaggaccggaggaagtatt 33247442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 20502134 - 20502085
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| |||||||||||| | ||||||||||||||||||||||| |||||    
T  20502134 atgaatctaaaaagtcaactttttcttataataaggaccggaggaagtat 20502085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 29451940 - 29451891
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||| ||||||| |||| | |||||||||||||||||||||||||||||    
T  29451940 atgaatctaaaaaatcaactttttcttataataaggaccggagggagtat 29451891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 13278935 - 13278883
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||| |||||||||| ||||||||||||||||| || ||||| ||||||||||    
T  13278935 caataaacctaaaaaatcaattgtttcttataacaaagaccgaagggagtatt 13278883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 27600805 - 27600758
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  27600805 atgaacttaaaaagtcaatt-tttcttataataaagaccggagggagta 27600758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 29031113 - 29031185
Alignment:
Q  16 taggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||| ||||  |||||| ||||||||| || | ||||||||||  ||||||||||||||||    
T  29031113 taggctaggtacatcaattgttgaatgaatctaaaaagttaactttttcttataaataggaccggagggagta 29031185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 38978789 - 38978741
Alignment:
Q  40 atgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| |||||||||||| | ||||||||||||||||| ||||||||||    
T  38978789 atgaatctaaaaagtcaactttttcttataataaggactggagggagta 38978741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 17225206 - 17225159
Alignment:
Q  39 aatgaacctaaaaagtcaattgtttcttataataaggaccggagggag 86  Q
    ||||||||||||||||||| | || |||||||||| ||||||||||||    
T  17225206 aatgaacctaaaaagtcaacttttgcttataataacgaccggagggag 17225159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27600820 - 27600907
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||| || |||||||||  |||||| |||| ||  |||||||| | ||||| |||||| |||||||||||||||| |||| ||||||    
T  27600820 atcttattgtaaatatagattagataaatcacttacacaatgaatcaaaaaaatcaattatttcttataataaggatcggatggagta 27600907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 35318600 - 35318522
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccg 79  Q
    |||| ||||||||||| | |||||||||| |||| |||||  ||| |||| ||| |||| |||||||||||||| ||||    
T  35318600 atctcgttataaatatggactagatacattatttatacaacaaacttaaatagttaattatttcttataataagtaccg 35318522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 38394477 - 38394427
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||| |||||||||||||| ||||||||||  |||| |||||||||||    
T  38394477 caatgaatctaaaaagtcaattttttcttataaataggatcggagggagta 38394427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 5002203 - 5002142
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggaggga 85  Q
    ||||||||||| | |||| || | |||||||||| ||||||||||||  |||||||||||||    
T  5002203 atacatcatttatgcaattaatcaaaaaagtcaaatgtttcttataaataggaccggaggga 5002142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 7313911 - 7313976
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    ||||||||||| |  | ||||||||||||||||| | || |||||||||  |||||||||||||||    
T  7313911 atacatcatttattgattgaacctaaaaagtcaacttttgcttataatagtgaccggagggagtat 7313976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 8680621 - 8680588
Alignment:
Q  37 acaatgaacctaaaaagtcaattgtttcttataa 70  Q
    ||||||||||||||||||||| ||||||||||||    
T  8680621 acaatgaacctaaaaagtcaaatgtttcttataa 8680588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 13654568 - 13654507
Alignment:
Q  24 atacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggaggga 85  Q
    ||||||||||| |  ||||||||||||||||||||  || |||||||||  |||||||||||    
T  13654568 atacatcatttattgaatgaacctaaaaagtcaatatttacttataatagtgaccggaggga 13654507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 18473563 - 18473624
Alignment:
Q  27 catcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||||| | |||||||||| ||||||||||||  ||||||  ||||||||    
T  18473563 catcatttatacaatgaatcaaaaaagtcaaatgtttcttataaataggaccaaagggagta 18473624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 33970733 - 33970656
Alignment:
Q  11 aaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    |||||||  ||| ||||||||||| |||||| ||   ||||||| |||||||||||||||||| ||| ||| ||||||    
T  33970733 aaatatatactaaatacatcatttatacaataaaataaaaaagttaattgtttcttataataaagactggatggagta 33970656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 1643451 - 1643495
Alignment:
Q  46 ctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||||||||||| ||| ||||||||  ||||||||||||||||||    
T  1643451 ctaaaaagtcaactgtctcttataaataggaccggagggagtatt 1643495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 4527778 - 4527722
Alignment:
Q  14 tataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataa 70  Q
    ||||| |||||||||||| ||  ||||| ||| ||||||||||||||||||| ||||    
T  4527778 tatagactagatacatcacttacacaataaacttaaaaagtcaattgtttctaataa 4527722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 7945878 - 7945834
Alignment:
Q  46 ctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||||    
T  7945878 ctaaaaagtaaattgtttcttgtaaataggaccggagggagtatt 7945834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 9630285 - 9630245
Alignment:
Q  37 acaatgaacctaaaaagtcaattgtttcttataataaggac 77  Q
    |||||||||| ||||| | ||||||||||||||||||||||    
T  9630285 acaatgaaccaaaaaaattaattgtttcttataataaggac 9630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 11932020 - 11931968
Alignment:
Q  37 acaatgaacctaaaaagtcaattgttt-cttataataaggaccggagggagta 88  Q
    |||||||| |||||||||||||| ||| |||||||  ||||||||||||||||    
T  11932020 acaatgaatctaaaaagtcaatttttttcttataaataggaccggagggagta 11931968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 3319 - 3251
Alignment:
Q  8 tataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagga 76  Q
    ||||||||||| |||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||    
T  3319 tataaatatagactagatacatcacttacacaatgaacataaaaagtcaattgtttcttataataagga 3251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 3339 - 3390
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    |||| ||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  3339 caattaacttaaaaagttaattgtttcttataataaggaccgg-gggagtatt 3390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 12808 - 12888
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccgga 81  Q
    |||| ||||||||| ||| |||||||||||| ||  | ||||||||||||||||||| |||||||||||||||||||||||    
T  12808 atctcgttataaatgtagactagatacatcacttaaataatgaacctaaaaagtcaaatgtttcttataataaggaccgga 12888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 12811 - 12744
Alignment:
Q  22 agatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||| ||  ||||||||||||||||||||| | |||||||||||||||||| || |||||||    
T  12811 agatacatcacttaaacaatgaacctaaaaagtcaaatatttcttataataaggaccagaaggagtat 12744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 25700 - 25618
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataaggaccggagg 83  Q
    ||||| |||||||||||| |||||||||||| || || ||| |||| ||||||| |||||||| |||||||||||||||||||    
T  25700 atcttattataaatatagactagatacatcacttatataataaaccaaaaaagttaattgttttttataataaggaccggagg 25618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 25724 - 25765
Alignment:
Q  48 aaaaagtcaattgtttcttataataaggaccggagggagtat 89  Q
    |||||||||| | ||||||||||||||||||||||| |||||    
T  25724 aaaaagtcaactttttcttataataaggaccggaggaagtat 25765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 40277 - 40189
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaa-ttgtttcttataataaggaccggagggagta 88  Q
    |||||||| ||||||||| |||||||||||| ||  |||||||||||||||| |||| || ||| |||||||||||||||||| |||||    
T  40277 atcttgttgtaaatatagactagatacatcacttacacaatgaacctaaaaaatcaattttttttttataataaggaccggagagagta 40189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 90
Target Start/End: Original strand, 40290 - 40342
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||||||||    
T  40290 caatgaatctaaaaagtcaaaagtttcttataataaggaccggagggagtatt 40342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12275 - 12350
Alignment:
Q  1 atcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagga 76  Q
    ||||| || |||||||||||||||||||||| |   ||||| ||||||||||||||||| ||| ||||||||||||    
T  12275 atcttcttgtaaatataggctagatacatcactaacacaataaacctaaaaagtcaattattttttataataagga 12350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 7717 - 7783
Alignment:
Q  10 taaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattgtttcttataataagga 76  Q
    ||||||||||||||||| |||| |   ||||| ||||||||||||||||| ||| ||||||||||||    
T  7717 taaatataggctagatatatcactaacacaataaacctaaaaagtcaattattttttataataagga 7783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 11858 - 11934
Alignment:
Q  2 tcttgttataaatataggctagatacatcatttgtacaatgaacctaaaaagtcaattg-tttcttataataaggac 77  Q
    ||||||||||||||||  |||||||||||| ||| | ||| ||||||||||||||  || |||||||||| ||||||    
T  11858 tcttgttataaatataaactagatacatcagttgcataataaacctaaaaagtcacctgttttcttataacaaggac 11934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 17434 - 17384
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 88  Q
    ||||||| ||||||| ||||  |||||||||||||| ||||||||||||||    
T  17434 caatgaatctaaaaaatcaaaagtttcttataataaagaccggagggagta 17384  T

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Target: scaffold0221 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 11071 - 11027
Alignment:
Q  46 ctaaaaagtcaattgtttcttataataaggaccggagggagtatt 90  Q
    ||||||||| |||||| |||| ||| |||||||||||||||||||    
T  11071 ctaaaaagtaaattgtctcttgtaaaaaggaccggagggagtatt 11027  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 5513 - 5549
Alignment:
Q  38 caatgaacctaaaaagtcaattgtttcttataataag 74  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  5513 caatgaatctaaaaagtcaattatttcttataataag 5549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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