View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12826_low_15 (Length: 243)
Name: NF12826_low_15
Description: NF12826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12826_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 12 - 225
Target Start/End: Original strand, 8474196 - 8474409
Alignment:
| Q |
12 |
agcacagatgaagttgacgaaaacatatgaaatgcaatttagctgcaagtctctgatcttgatagtcgttttttcttgggaagctccaaagtttagatgg |
111 |
Q |
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| T |
8474196 |
agcacagatgaagttgacgaaaacatatgaaatgcaatttagctgcaagtatctgatcttgatagtcgttttttcttgggaagctccaaagtttagatgg |
8474295 |
T |
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| Q |
112 |
cactagaaatttatttactcatgttattctgatattcatcaatgtgaatgttttcaatgcggcttgtttgttcacatgaaagacataattcactggtttc |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
8474296 |
cactagaaatttatttactcatgttattctgatattcatcaatgtgaatgttttcaatgcggcttgtttgtacacatgaaagacataattcactggtttc |
8474395 |
T |
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| Q |
212 |
atcatcttagatgt |
225 |
Q |
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||||||||| |||| |
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| T |
8474396 |
atcatcttatatgt |
8474409 |
T |
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