View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12828_high_7 (Length: 215)
Name: NF12828_high_7
Description: NF12828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12828_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 46419926 - 46420130
Alignment:
| Q |
1 |
ttcagtaatggtagcatctgtttaacaataaaggattccccaaaaataccccctgggaagtcaagnnnnnnnnttaaagggggttagaactgaagatctc |
100 |
Q |
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| T |
46419926 |
ttcagtaatggtagcatctgtttaacaataaaggattccccaaaaataccccctgggaagtcaagaaaaaaaattaaagggggttagaactgaagatctc |
46420025 |
T |
|
| Q |
101 |
agtaatgaaaatatggaaaaatacaaaattcaattaattaaaaataccaattctgaccagcacatcaatgccatctacacatagtcctttcccaaagcag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46420026 |
agtaatgaaaatatggaaaaatacaaaattcaattaattaaaaataccaattctgaccagcacatcaatgccatctacacatagtcctttcccaaagcag |
46420125 |
T |
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| Q |
201 |
tgaac |
205 |
Q |
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||||| |
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| T |
46420126 |
tgaac |
46420130 |
T |
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