View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12832_high_26 (Length: 230)
Name: NF12832_high_26
Description: NF12832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12832_high_26 |
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Alignment Details
Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 6624374 - 6624164
Alignment:
| Q |
1 |
ctattaatagtcttggaatctctgtttccacagctaactgggcattctgctgatctgtctttgaaaggaagtccatattggatggctccagaggtatatt |
100 |
Q |
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| T |
6624374 |
ctattaatagtcttggaatctctgtttccacagctaactgggcattctgctgatctgtctttgaaaggaagtccatattggatggctccagaggtatatt |
6624275 |
T |
|
| Q |
101 |
tgtatatatttgaactctacattactcttttatgtatcacgtgttctttactcaaacttgcttctcatacagcttatgcaagcggtcatacataaagata |
200 |
Q |
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||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6624274 |
tgt--atatttgaactctaaattactctcttatgtatcacgtgttctttactcaaacttgcttctcatacagcttatgcaagcggtcatacataaagata |
6624177 |
T |
|
| Q |
201 |
acagctctgatct |
213 |
Q |
| |
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||||||||||||| |
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| T |
6624176 |
acagctctgatct |
6624164 |
T |
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