View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12832_low_20 (Length: 312)

Name: NF12832_low_20
Description: NF12832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12832_low_20
NF12832_low_20
[»] chr2 (44 HSPs)
chr2 (38-287)||(9400885-9401119)
chr2 (127-213)||(33827572-33827659)
chr2 (134-213)||(28668991-28669071)
chr2 (127-213)||(35171911-35171998)
chr2 (127-213)||(44946052-44946139)
chr2 (127-212)||(11941210-11941296)
chr2 (126-212)||(25293268-25293356)
chr2 (146-213)||(18692091-18692158)
chr2 (134-213)||(34516413-34516492)
chr2 (155-212)||(27269344-27269401)
chr2 (134-213)||(15038077-15038157)
chr2 (146-213)||(2140485-2140552)
chr2 (127-213)||(3943851-3943938)
chr2 (127-205)||(36242319-36242398)
chr2 (127-213)||(24196115-24196200)
chr2 (127-212)||(30466830-30466916)
chr2 (146-212)||(44929846-44929912)
chr2 (139-213)||(14486948-14487023)
chr2 (146-213)||(18976454-18976521)
chr2 (146-213)||(19054157-19054224)
chr2 (158-213)||(43374329-43374384)
chr2 (127-212)||(714125-714211)
chr2 (134-212)||(29361667-29361745)
chr2 (127-213)||(41314103-41314189)
chr2 (127-212)||(41329953-41330039)
chr2 (135-212)||(4852649-4852726)
chr2 (127-212)||(13266601-13266686)
chr2 (139-212)||(19174886-19174959)
chr2 (126-205)||(45132397-45132477)
chr2 (127-208)||(5608038-5608120)
chr2 (155-213)||(8192351-8192409)
chr2 (171-213)||(27290730-27290772)
chr2 (155-213)||(39957898-39957956)
chr2 (5-46)||(9401386-9401427)
chr2 (127-212)||(17324877-17324961)
chr2 (127-193)||(44976172-44976240)
chr2 (127-213)||(5394128-5394215)
chr2 (134-212)||(44610157-44610236)
chr2 (142-212)||(19605846-19605916)
chr2 (127-212)||(36390569-36390654)
chr2 (164-213)||(1501463-1501511)
chr2 (129-213)||(8259010-8259095)
chr2 (127-212)||(13599325-13599410)
chr2 (161-213)||(4567428-4567480)
[»] chr6 (28 HSPs)
chr6 (127-213)||(3222635-3222721)
chr6 (127-213)||(21148510-21148596)
chr6 (127-213)||(15360097-15360184)
chr6 (127-213)||(1345046-1345133)
chr6 (127-213)||(34147457-34147544)
chr6 (127-213)||(34160073-34160160)
chr6 (127-212)||(654146-654232)
chr6 (127-212)||(9690638-9690724)
chr6 (127-213)||(21982320-21982406)
chr6 (127-212)||(5360071-5360157)
chr6 (134-211)||(9239093-9239171)
chr6 (127-212)||(11448982-11449068)
chr6 (134-213)||(14213000-14213080)
chr6 (134-212)||(28672185-28672264)
chr6 (129-213)||(9844051-9844136)
chr6 (135-212)||(11841020-11841097)
chr6 (127-213)||(17081053-17081140)
chr6 (139-212)||(17225790-17225863)
chr6 (135-203)||(33718478-33718547)
chr6 (134-213)||(11007283-11007363)
chr6 (129-212)||(15730495-15730579)
chr6 (127-210)||(10377826-10377911)
chr6 (146-212)||(14504082-14504148)
chr6 (109-213)||(21903618-21903724)
chr6 (174-212)||(4797256-4797294)
chr6 (180-213)||(7491665-7491698)
chr6 (127-213)||(12390536-12390620)
chr6 (148-212)||(33499608-33499672)
[»] chr5 (47 HSPs)
chr5 (127-213)||(19456210-19456296)
chr5 (127-213)||(41351103-41351189)
chr5 (127-213)||(7085625-7085712)
chr5 (127-213)||(8484660-8484747)
chr5 (127-213)||(27498730-27498817)
chr5 (125-213)||(33709502-33709591)
chr5 (135-212)||(22693054-22693132)
chr5 (127-213)||(38684319-38684405)
chr5 (129-213)||(18207320-18207405)
chr5 (127-212)||(11926501-11926588)
chr5 (128-207)||(11464913-11464992)
chr5 (127-213)||(15641105-15641191)
chr5 (129-212)||(28614486-28614569)
chr5 (127-213)||(32059439-32059526)
chr5 (127-213)||(35425124-35425211)
chr5 (131-212)||(13659245-13659327)
chr5 (128-213)||(21236361-21236447)
chr5 (155-213)||(37495194-37495252)
chr5 (127-212)||(19145412-19145497)
chr5 (129-204)||(13108458-13108534)
chr5 (127-213)||(4603888-4603975)
chr5 (127-213)||(10869564-10869651)
chr5 (134-204)||(13038463-13038534)
chr5 (127-213)||(22392799-22392886)
chr5 (146-213)||(30485959-30486026)
chr5 (146-213)||(38630978-38631045)
chr5 (127-212)||(5049248-5049333)
chr5 (155-212)||(27487554-27487611)
chr5 (161-213)||(10631288-10631340)
chr5 (134-212)||(23270522-23270601)
chr5 (131-213)||(31287945-31288028)
chr5 (127-212)||(34310253-34310339)
chr5 (127-213)||(12317154-12317240)
chr5 (127-212)||(6014280-6014366)
chr5 (146-212)||(9659311-9659377)
chr5 (127-212)||(34049922-34050008)
chr5 (155-213)||(42006873-42006931)
chr5 (144-201)||(5067390-5067447)
chr5 (127-212)||(10813851-10813936)
chr5 (155-212)||(41084123-41084180)
chr5 (165-213)||(3599997-3600045)
chr5 (127-213)||(12398447-12398534)
chr5 (166-212)||(7151454-7151500)
chr5 (155-213)||(33737882-33737939)
chr5 (127-183)||(15971151-15971208)
chr5 (179-212)||(25750613-25750646)
chr5 (155-212)||(36895565-36895622)
[»] chr3 (59 HSPs)
chr3 (127-213)||(24165714-24165800)
chr3 (127-212)||(49258262-49258348)
chr3 (127-212)||(52821636-52821721)
chr3 (127-213)||(8097278-8097365)
chr3 (127-213)||(10083818-10083905)
chr3 (127-213)||(46576459-46576546)
chr3 (127-213)||(15566499-15566585)
chr3 (127-212)||(24407372-24407458)
chr3 (127-213)||(10190741-10190828)
chr3 (127-213)||(40133448-40133535)
chr3 (127-213)||(45272415-45272502)
chr3 (134-213)||(53424176-53424255)
chr3 (134-212)||(54475799-54475878)
chr3 (127-213)||(8456149-8456236)
chr3 (146-213)||(26174244-26174311)
chr3 (127-213)||(48977499-48977586)
chr3 (146-213)||(53848433-53848500)
chr3 (127-213)||(1178283-1178368)
chr3 (134-212)||(4462751-4462829)
chr3 (127-212)||(18176887-18176973)
chr3 (127-212)||(32151535-32151621)
chr3 (127-212)||(35493022-35493108)
chr3 (127-212)||(39041852-39041938)
chr3 (127-211)||(25379872-25379957)
chr3 (127-211)||(48104988-48105073)
chr3 (127-213)||(2511296-2511383)
chr3 (127-213)||(25289714-25289800)
chr3 (127-213)||(30257735-30257822)
chr3 (127-213)||(45529754-45529840)
chr3 (127-213)||(52455648-52455735)
chr3 (127-213)||(53233910-53233996)
chr3 (127-212)||(21363054-21363140)
chr3 (126-212)||(50731237-50731323)
chr3 (126-212)||(50781531-50781617)
chr3 (159-212)||(4048094-4048147)
chr3 (127-213)||(30807152-30807239)
chr3 (127-212)||(6041670-6041757)
chr3 (134-212)||(33398468-33398547)
chr3 (127-213)||(33698705-33698792)
chr3 (126-204)||(55371302-55371381)
chr3 (127-212)||(34492575-34492661)
chr3 (164-213)||(3747730-3747779)
chr3 (146-207)||(26158942-26159003)
chr3 (144-212)||(25017618-25017685)
chr3 (129-212)||(7485531-7485613)
chr3 (146-213)||(8958034-8958101)
chr3 (127-213)||(40940936-40941023)
chr3 (146-204)||(4252404-4252462)
chr3 (127-212)||(1692945-1693030)
chr3 (128-212)||(31537838-31537923)
chr3 (126-213)||(7195917-7196005)
chr3 (134-194)||(29915288-29915348)
chr3 (134-194)||(29964441-29964501)
chr3 (151-207)||(32414581-32414637)
chr3 (127-181)||(1242085-1242139)
chr3 (171-213)||(11390758-11390800)
chr3 (127-197)||(14343304-14343374)
chr3 (134-212)||(53288713-53288791)
chr3 (159-213)||(55287929-55287983)
[»] chr1 (42 HSPs)
chr1 (109-211)||(37351454-37351558)
chr1 (127-212)||(26513148-26513233)
chr1 (127-213)||(4621236-4621323)
chr1 (127-213)||(8254751-8254838)
chr1 (127-212)||(24122134-24122220)
chr1 (127-213)||(7766726-7766813)
chr1 (134-211)||(34778457-34778535)
chr1 (127-213)||(7578520-7578607)
chr1 (127-213)||(15059401-15059488)
chr1 (127-213)||(32729655-32729742)
chr1 (127-212)||(24674504-24674590)
chr1 (127-211)||(17935880-17935965)
chr1 (127-213)||(2272455-2272542)
chr1 (127-213)||(22909982-22910069)
chr1 (127-212)||(7197247-7197333)
chr1 (155-213)||(27454863-27454921)
chr1 (134-213)||(48699877-48699957)
chr1 (134-204)||(8779744-8779815)
chr1 (146-213)||(46607941-46608008)
chr1 (127-212)||(9500355-9500441)
chr1 (134-207)||(21726847-21726921)
chr1 (146-212)||(35138119-35138185)
chr1 (127-208)||(1379009-1379090)
chr1 (127-212)||(40802069-40802154)
chr1 (166-213)||(14603947-14603994)
chr1 (161-212)||(23041668-23041719)
chr1 (162-212)||(5315478-5315528)
chr1 (146-212)||(9926146-9926212)
chr1 (135-213)||(27159205-27159283)
chr1 (128-202)||(43769975-43770049)
chr1 (127-207)||(18646964-18647045)
chr1 (155-212)||(36155888-36155945)
chr1 (134-212)||(45331621-45331701)
chr1 (129-212)||(18533724-18533808)
chr1 (146-213)||(30677307-30677374)
chr1 (134-212)||(45859043-45859122)
chr1 (134-213)||(23734234-23734315)
chr1 (134-213)||(23741426-23741507)
chr1 (151-212)||(809358-809419)
chr1 (129-213)||(33905509-33905594)
chr1 (127-210)||(8077758-8077841)
chr1 (148-204)||(40145889-40145945)
[»] scaffold0576 (1 HSPs)
scaffold0576 (127-213)||(5081-5168)
[»] chr7 (44 HSPs)
chr7 (127-213)||(2751386-2751473)
chr7 (127-212)||(3851872-3851958)
chr7 (134-213)||(21217832-21217912)
chr7 (127-213)||(22120003-22120090)
chr7 (127-213)||(40542909-40542996)
chr7 (127-213)||(654704-654790)
chr7 (127-213)||(21835266-21835353)
chr7 (127-213)||(23092211-23092298)
chr7 (127-213)||(29861785-29861872)
chr7 (127-212)||(7275392-7275478)
chr7 (127-212)||(17196950-17197036)
chr7 (128-213)||(27312268-27312354)
chr7 (127-211)||(22638403-22638488)
chr7 (134-213)||(16374116-16374196)
chr7 (127-213)||(11997964-11998051)
chr7 (127-213)||(42913512-42913599)
chr7 (127-212)||(18044222-18044308)
chr7 (127-213)||(28089935-28090021)
chr7 (127-211)||(19421346-19421431)
chr7 (155-212)||(31712902-31712959)
chr7 (146-213)||(7175861-7175928)
chr7 (127-213)||(10091303-10091389)
chr7 (127-213)||(22703601-22703688)
chr7 (127-213)||(31274029-31274115)
chr7 (134-213)||(31197712-31197792)
chr7 (127-213)||(23012507-23012594)
chr7 (127-212)||(27009474-27009561)
chr7 (135-213)||(43785298-43785377)
chr7 (128-212)||(25333519-25333603)
chr7 (127-211)||(32849706-32849791)
chr7 (139-207)||(1766149-1766217)
chr7 (134-213)||(2344421-2344501)
chr7 (128-211)||(9683942-9684026)
chr7 (146-213)||(21574101-21574168)
chr7 (146-204)||(8943409-8943467)
chr7 (127-212)||(41907514-41907599)
chr7 (127-212)||(39145652-39145737)
chr7 (127-213)||(2103170-2103255)
chr7 (127-213)||(9717986-9718073)
chr7 (146-212)||(27704136-27704202)
chr7 (127-212)||(28950986-28951072)
chr7 (127-212)||(36772303-36772389)
chr7 (160-205)||(17212202-17212247)
chr7 (157-210)||(30345511-30345564)
[»] chr8 (41 HSPs)
chr8 (127-212)||(264400-264485)
chr8 (127-212)||(651436-651521)
chr8 (127-212)||(837171-837256)
chr8 (127-211)||(28193589-28193674)
chr8 (127-213)||(2639410-2639497)
chr8 (127-213)||(3734622-3734709)
chr8 (127-213)||(4718760-4718847)
chr8 (127-213)||(8765525-8765612)
chr8 (127-213)||(32879394-32879481)
chr8 (127-213)||(39349371-39349458)
chr8 (127-212)||(21603345-21603431)
chr8 (127-213)||(34237654-34237741)
chr8 (127-212)||(10292169-10292255)
chr8 (148-213)||(14633091-14633156)
chr8 (127-213)||(2618301-2618388)
chr8 (127-213)||(42328119-42328206)
chr8 (142-212)||(42643118-42643188)
chr8 (127-213)||(20306023-20306110)
chr8 (127-213)||(21092656-21092743)
chr8 (127-213)||(19471724-19471812)
chr8 (127-213)||(19542648-19542736)
chr8 (127-213)||(19589960-19590048)
chr8 (127-212)||(25248463-25248547)
chr8 (127-203)||(28088401-28088478)
chr8 (127-213)||(4698722-4698809)
chr8 (134-212)||(12312968-12313046)
chr8 (127-212)||(18128628-18128714)
chr8 (127-211)||(15259407-15259492)
chr8 (127-213)||(34610686-34610773)
chr8 (127-212)||(6953008-6953093)
chr8 (129-211)||(7557952-7558034)
chr8 (155-213)||(16990727-16990785)
chr8 (176-213)||(18532263-18532300)
chr8 (127-213)||(27746334-27746421)
chr8 (146-212)||(2166831-2166897)
chr8 (178-212)||(9713621-9713655)
chr8 (146-212)||(20470052-20470117)
chr8 (129-213)||(1219466-1219551)
chr8 (129-213)||(28964150-28964234)
chr8 (159-211)||(8387460-8387512)
chr8 (181-213)||(10544924-10544956)
[»] chr4 (49 HSPs)
chr4 (127-213)||(19660531-19660618)
chr4 (127-213)||(34844757-34844844)
chr4 (127-213)||(40058851-40058938)
chr4 (127-211)||(52983730-52983815)
chr4 (127-213)||(5609201-5609288)
chr4 (127-213)||(32986308-32986395)
chr4 (127-213)||(44343625-44343712)
chr4 (127-213)||(27528794-27528881)
chr4 (127-213)||(18875516-18875602)
chr4 (127-212)||(34723910-34723996)
chr4 (127-213)||(55961753-55961839)
chr4 (127-212)||(35229278-35229365)
chr4 (134-213)||(46714511-46714591)
chr4 (127-213)||(32990546-32990633)
chr4 (127-213)||(45787703-45787790)
chr4 (127-213)||(54127341-54127428)
chr4 (129-213)||(22488027-22488112)
chr4 (159-212)||(23639768-23639821)
chr4 (159-212)||(23645426-23645479)
chr4 (126-212)||(51535730-51535818)
chr4 (155-212)||(52494628-52494685)
chr4 (127-210)||(20077986-20078070)
chr4 (146-212)||(4064991-4065057)
chr4 (146-212)||(9978509-9978575)
chr4 (127-212)||(20566461-20566547)
chr4 (127-212)||(51595133-51595219)
chr4 (127-203)||(9517650-9517727)
chr4 (128-211)||(13550320-13550404)
chr4 (149-213)||(23131435-23131499)
chr4 (127-213)||(4912037-4912124)
chr4 (131-213)||(36131509-36131592)
chr4 (155-213)||(7391964-7392022)
chr4 (127-212)||(33696279-33696365)
chr4 (155-213)||(43719086-43719144)
chr4 (134-212)||(49287976-49288054)
chr4 (147-212)||(37302619-37302684)
chr4 (127-213)||(21387486-21387571)
chr4 (127-213)||(13584253-13584340)
chr4 (127-213)||(27574429-27574516)
chr4 (127-213)||(53787056-53787143)
chr4 (162-212)||(25852362-25852412)
chr4 (150-212)||(33289189-33289251)
chr4 (126-211)||(41621583-41621669)
chr4 (155-212)||(17637852-17637908)
chr4 (129-213)||(6427102-6427185)
chr4 (155-211)||(9646217-9646273)
chr4 (135-211)||(20527035-20527111)
chr4 (180-212)||(24672305-24672337)
chr4 (127-211)||(25969504-25969587)
[»] scaffold0217 (1 HSPs)
scaffold0217 (128-212)||(7309-7394)
[»] scaffold0102 (1 HSPs)
scaffold0102 (129-213)||(39205-39290)
[»] scaffold0328 (1 HSPs)
scaffold0328 (133-212)||(13047-13127)
[»] scaffold0070 (1 HSPs)
scaffold0070 (127-213)||(40436-40522)
[»] scaffold0049 (1 HSPs)
scaffold0049 (127-212)||(66865-66951)
[»] scaffold0019 (1 HSPs)
scaffold0019 (146-213)||(161940-162007)
[»] scaffold0459 (1 HSPs)
scaffold0459 (127-213)||(10694-10779)
[»] scaffold0051 (1 HSPs)
scaffold0051 (127-213)||(52870-52957)
[»] scaffold1175 (1 HSPs)
scaffold1175 (127-212)||(2426-2512)
[»] scaffold0199 (1 HSPs)
scaffold0199 (155-212)||(8451-8508)
[»] scaffold0366 (2 HSPs)
scaffold0366 (127-213)||(9299-9385)
scaffold0366 (127-213)||(12000-12086)
[»] scaffold0068 (1 HSPs)
scaffold0068 (127-213)||(41644-41730)
[»] scaffold0016 (1 HSPs)
scaffold0016 (146-213)||(32419-32485)
[»] scaffold0623 (1 HSPs)
scaffold0623 (127-212)||(1057-1142)
[»] scaffold0026 (1 HSPs)
scaffold0026 (127-212)||(97366-97452)
[»] scaffold0020 (1 HSPs)
scaffold0020 (143-212)||(123066-123134)


Alignment Details
Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 38 - 287
Target Start/End: Complemental strand, 9401119 - 9400885
Alignment:
Q  38 taattgaaattgaccggcatcaggggaaccagtcatgtacgtaactcatggagtcaatacttgacagtgatatacagagcttgctctgagctctgacttt 137  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||                 ||||||| ||||    
T  9401119 taattgaaattgaccagcatcagaggaacaagtcatgtacgtaactcatggagtcaatacttgacagtgat-----------------agctctggcttt 9401037  T
Q  138 aaac-ggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt-cnnnnnnnnnnnnnnntacttga 235  Q
    |||| ||| |||| ||| ||||| ||||||||| |  |||| ||||||| |||||||||||||||||| |||||||                 |||||||    
T  9401036 aaacagggcccccgcaagtgggcagtgggattggtttccttagattagtcgattcttggatcggatactgagttttaaaaaaaaaaaaaaaaatacttga 9400937  T
Q  236 cagtgaaaaatgagtcctcgttgttgaatgtgaatgatttaacttaactatt 287  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9400936 cagtgaaaaatgagtcctcattgttgaatgtgaatgatttaacttaactatt 9400885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 33827659 - 33827572
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  33827659 gctctggctttaaacgggacccctgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccgagttttc 33827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 28668991 - 28669071
Alignment:
Q  134 ctttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||||| |||| ||||||||||||||| |||||| |||||||| |||| ||||||||||||||||||||||    
T  28668991 ctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggataccgagttttc 28669071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 35171911 - 35171998
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||||    
T  35171911 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 35171998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 44946139 - 44946052
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  44946139 gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 44946052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 11941296 - 11941210
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  11941296 gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 25293268 - 25293356
Alignment:
Q  126 agctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||| |||||||||||||||| |  || |||||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  25293268 agctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 25293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 18692091 - 18692158
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||| ||||||||||||||| |||||| | |||||| |||||||||||||||||||||||||||    
T  18692091 ccccacaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgagttttc 18692158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 34516492 - 34516413
Alignment:
Q  134 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||| |||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||||    
T  34516492 ctttaaacgggcccctgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagttttc 34516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 27269401 - 27269344
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  27269401 tgggcggtgggattgatcccctcggattagtcgattcttggataggataccgagtttt 27269344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 15038077 - 15038157
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||| |||||  ||| ||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||||    
T  15038077 ctttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 15038157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 2140552 - 2140485
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| ||||||||||||||| |||||| |||||||| |||| ||||||||||||||||||||||    
T  2140552 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagttttc 2140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 3943851 - 3943938
Alignment:
Q  127 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||| ||| ||| |||| |||||||||| ||||||||||||||| | || |||||||||||||| |||||||    
T  3943851 gctctggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggattagtcggttattggatcggataccaagttttc 3943938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 36242398 - 36242319
Alignment:
Q  127 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggatacc 205  Q
    |||||| |||||||||||| |||| ||| ||||||||||||||| |||||| |||||| | |||||||||||||||||||    
T  36242398 gctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggatacc 36242319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 24196115 - 24196200
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| |||| ||| ||||||||||||||| |||||| |||||||| |||| || ||| |||||||||||||||    
T  24196115 gctctggctttaaacggg-ccccgcaagtgggcggtgggattggtcccctcggattagtcgattttttgattggataccgagttttc 24196200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 30466916 - 30466830
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||| |||||||  ||| ||||| ||||||||| |||| | |||||||| ||||||||||||||||||||||||||    
T  30466916 gctctggctttaaaccgggcccccgcaagtgggcagtgggattggtcccttcggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 44929912 - 44929846
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| ||| ||| ||||||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  44929912 ccccgcaagtggacggtgggattggtccccttgaattagtcgattcttggatcggataccgagtttt 44929846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 14486948 - 14487023
Alignment:
Q  139 aacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||  ||| ||||||||||||||| |||||| |||||||| | | |||||||||||||||||||||||    
T  14486948 aacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 14487023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 18976521 - 18976454
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| ||||||||||||||| |||||| | |||||| ||||||||||||||||||||| |||||    
T  18976521 ccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaattttc 18976454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 19054157 - 19054224
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| ||||||||||||||| ||| || |||||||| |||||||||||| ||||||||||||||    
T  19054157 ccccgcaagtgggcggtgggattggtccgctcggattagtcgattcttggatcagataccgagttttc 19054224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 43374384 - 43374329
Alignment:
Q  158 gcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||| |||| | |||||||| |||||||||||||||||||||||||||    
T  43374384 gcggtgggattggtcccttcggattagtcgattcttggatcggataccgagttttc 43374329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 714211 - 714125
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||||||||| |||||  ||||||||||||||| ||  ||||||  ||||||| ||||||| ||| ||||||||||||||    
T  714211 gctctgactttaaacggagcccccgcaaatgggcggtgggtttcgtcccctcagattagtcgattcttagattggataccgagtttt 714125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 29361667 - 29361745
Alignment:
Q  134 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||| ||||| ||| ||||| |||||||||||| ||| |||||| | ||||| ||||||||||| ||||||||    
T  29361667 ctttaaacggagccccgcaagtgggcagtgggattgatctcctcggattaattgattcctggatcggatatcgagtttt 29361745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 41314103 - 41314189
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||||||  ||| ||| ||| ||||||||||| ||||||  ||||| | ||||||| ||||||||||| |||||||    
T  41314103 gctctgactttaaacgggatcccgcaagtggacggtgggattggtcccctcagattaatcgattcttcgatcggataccaagttttc 41314189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 41329953 - 41330039
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||| |||||||| |||| ||||||||| ||||| ||||||  ||||||| | |||||||| |||||||||||||||    
T  41329953 gctctggctttaaatggggcccccacaagtgggcggtgagattggtcccctcagattagtcggttcttggaccggataccgagtttt 41330039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 4852649 - 4852726
Alignment:
Q  135 tttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||||||| ||| ||| |||||| |||| |||||| |||||| | |||||||||||||||| || ||||||    
T  4852649 tttaaacggggccccgcaagtggacggtggaattggtcccctcggattaatcgattcttggatcggatgccaagtttt 4852726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 13266601 - 13266686
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||||||||||| ||| ||||   |||||||| ||||||   |||||| ||||||||||||||||| ||||||||    
T  13266601 gctctggctttaaacggggccccgcaagtgggtaatgggattggtcccctcaaattagtcgattcttggatcggatatcgagtttt 13266686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 19174886 - 19174959
Alignment:
Q  139 aacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||| |||||  ||||||||||||||||||||||||| |||||| | | | ||||||||||||||||| ||||    
T  19174886 aacggagccccgtaaatgggcggtgggattgatcccctcggattaatcggtccttggatcggataccgaatttt 19174959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 45132397 - 45132477
Alignment:
Q  126 agctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggatacc 205  Q
    ||||||| |||||||||||||||| |||| ||||| || |||||| ||| || |||||| | |||||||||||||||||||    
T  45132397 agctctggctttaaacggggcccccacaagtgggcagtaggattggtcctctcggattaatcgattcttggatcggatacc 45132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 5608120 - 5608038
Alignment:
Q  127 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgag 208  Q
    ||||||||||||||||| || ||||||||||| ||| |||||||||||| |  ||| ||| |||| ||| |||||||||||||    
T  5608120 gctctgactttaaacggagctcccacaaatggtcggcgggattgatcccttcagatgagtcgattattgaatcggataccgag 5608038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 8192409 - 8192351
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||||  ||||| |||||||| | | |||||||||||||||||||||||    
T  8192409 tgggcggtgggattgggcccctcggattagtcggtccttggatcggataccgagttttc 8192351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 27290730 - 27290772
Alignment:
Q  171 tccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  27290730 tcccctcggattagtcgattcttggatcggataccgagttttc 27290772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 39957898 - 39957956
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||| | |||| |||||||| ||||||||||| |||||||||||||||    
T  39957898 tgggcgatgggattggttccctcggattagtcgattcttggattggataccgagttttc 39957956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 9401427 - 9401386
Alignment:
Q  5 acactattgggagctaaggtaagtaacttatcgtaattgaaa 46  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  9401427 acaccattgggagctaaggtaagtaacttattgtaattgaaa 9401386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 17324877 - 17324961
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||| ||| |||||||| ||||||||||||||  ||||||   |||||| ||||||| ||||||||| ||||||||    
T  17324877 gctctggctttaaatgggcccccacaagtgggcggtgggattagtcccctcaaattagtcgattctt-gatcggatatcgagtttt 17324961  T

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Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 44976240 - 44976172
Alignment:
Q  127 gctctgactttaaacggggc--cccacaaatgggcggtgggattgatccccttggattagtagattctt 193  Q
    |||||| |||||||||||||  ||| ||| |||||||||||||||||||| | |||||||| |||||||    
T  44976240 gctctggctttaaacggggctccccgcaagtgggcggtgggattgatcccttcggattagtcgattctt 44976172  T

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Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 5394128 - 5394215
Alignment:
Q  127 gctctgactttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||| |||||| || ||| ||||||||||||||| |||  | |||||||| | | ||| ||||||||||||| |||||    
T  5394128 gctctgactttaaatggggccgccgcaagtgggcggtgggattggtccgttcggattagtcggtccttagatcggataccgaattttc 5394215  T

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Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 44610157 - 44610236
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||| ||||||||  ||| ||||||||||||||| |||| | |||||||| | |||||||| || ||||||||||||    
T  44610157 ctttaaatggggcccctgcaagtgggcggtgggattggtcccatcggattagtcggttcttggaccgaataccgagtttt 44610236  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 19605916 - 19605846
Alignment:
Q  142 ggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| ||||||| ||||||||| ||||| |||||| | |||||| ||  ||||||||||||| ||||||||    
T  19605916 gggggcccacaagtgggcggtgagattggtcccctcgaattagttgacacttggatcggatatcgagtttt 19605846  T

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Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 36390654 - 36390569
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||| ||| ||||  ||| ||||||||||||||| |||| | |||| ||| ||| |||| |||||||||||||||||    
T  36390654 gctctgactttaaatgggacccccgcaagtgggcggtgggattggtccc-tcggatcagtcgatacttgaatcggataccgagtttt 36390569  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 1501511 - 1501463
Alignment:
Q  164 ggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||| |||||||| |||||||| ||||||||||||||||||    
T  1501511 ggattggtcccctcggattagtcgattcttg-atcggataccgagttttc 1501463  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 8259010 - 8259095
Alignment:
Q  129 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| |||||| |||||||||  ||| | ||||||||||||  | || | |||||||| |||||||||||||||||| ||||||||    
T  8259010 tctggctttaatcggggcccccgcaagtaggcggtgggattagttccttcggattagtcgattcttggatcggatactgagttttc 8259095  T

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Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 13599410 - 13599325
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||  ||||||||||| ||| ||| ||||| ||||||||||||   |||||| | |  |||||||||||||||| ||||    
T  13599410 gctctgacttagaacggggccccgcaagtggacggtgagattgatcccctcatattagtgggtcattggatcggataccgaatttt 13599325  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 4567480 - 4567428
Alignment:
Q  161 gtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||| ||| || ||||||||  |||||||||||||||||| |||||||    
T  4567480 gtgggattggtcctctcggattagtcaattcttggatcggatacccagttttc 4567428  T

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Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 3222721 - 3222635
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||||||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  3222721 gctctgtctttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3222635  T

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Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 21148596 - 21148510
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||||    
T  21148596 gctctgactttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 21148510  T

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Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 15360184 - 15360097
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  15360184 gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 15360097  T

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Target: chr6; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 1345046 - 1345133
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| ||||  ||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  1345046 gctctggctttaaacgggccccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttttc 1345133  T

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Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 34147457 - 34147544
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  34147457 gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34147544  T

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Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 34160073 - 34160160
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  34160073 gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34160160  T

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Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 654232 - 654146
Alignment:
Q  127 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||| ||| ||| ||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||||    
T  654232 gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattattggatcggataccgagtttt 654146  T

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Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 9690724 - 9690638
Alignment:
Q  127 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||| ||||| ||| ||||||||||| ||| || |||||||| ||||||||||||||||||||||||||    
T  9690724 gctctggctttaaacggggccctcacaagtggacggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttt 9690638  T

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Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 21982406 - 21982320
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||| | |||||||| |||||||||||||||||||||||||||    
T  21982406 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccc-tcggattagtcgattcttggatcggataccgagttttc 21982320  T

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Target: chr6; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 5360157 - 5360071
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||||  |||| |||| ||||||||||||||| |||||| | |||||| ||||||| ||||||||||||||||||    
T  5360157 gctctgactttaaacggaacccccacaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgagtttt 5360071  T

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Target: chr6; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 9239093 - 9239171
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    ||||||| ||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  9239093 ctttaaatggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 9239171  T

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Target: chr6; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 11448982 - 11449068
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||| |||||||| ||||||||    
T  11448982 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagtttt 11449068  T

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Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 14213000 - 14213080
Alignment:
Q  134 ctttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||| |||| ||| |||| |||||||||| ||| || |||||||| |||||||||||||||||||||||||||    
T  14213000 ctttaaacgggggccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagttttc 14213080  T

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Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 28672185 - 28672264
Alignment:
Q  134 ctttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||| ||| | ||| ||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||||    
T  28672185 ctttaaacgggcccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagtttt 28672264  T

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Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 9844051 - 9844136
Alignment:
Q  129 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||||||||||||||||  ||| ||||||||| ||||| |||| | |||||||| ||||||||||||||||| |||||||||    
T  9844051 tctggctttaaacggggccccctcaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggatatcgagttttc 9844136  T

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Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 11841020 - 11841097
Alignment:
Q  135 tttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||| || ||| ||||||||||  |||||| | |||||| |||| |||||||||||||||||||||    
T  11841020 tttaaacggggccccataagtggacggtgggattagtcccctcgaattagtcgattattggatcggataccgagtttt 11841097  T

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Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 17081140 - 17081053
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||| |||||| | || ||| | ||||||||||| |||||||||||||    
T  17081140 gctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcgaataagttgtttcttggatcgaataccgagttttc 17081053  T

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Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 17225790 - 17225863
Alignment:
Q  139 aacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||| |||||||||||||||||||||| |||  ||||||| | | ||| ||||||||| ||||||||    
T  17225790 aacggggccccgcaaatgggcggtgggattgatctcctcagattagtcggtccttagatcggatatcgagtttt 17225863  T

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Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 33718547 - 33718478
Alignment:
Q  135 tttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggata 203  Q
    ||||||||||||| |  ||| ||| |||||||||||||||||| |||||||| |||||||||||||||||    
T  33718547 tttaaacggggcctctgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggata 33718478  T

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Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 11007283 - 11007363
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||  ||| |||||||||||||||  ||||| |||||||| ||||||| ||||||||||| |||||||    
T  11007283 ctttaagcggggcccccgcaagtgggcggtgggattggccccctcggattagtcgattctttgatcggatacctagttttc 11007363  T

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Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 15730579 - 15730495
Alignment:
Q  129 tctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| ||||||||| |||||| |||  ||||||||||||||| || ||| |||||||| ||||||| ||||||||| ||||||||    
T  15730579 tctggctttaaacgtggcccccacacgtgggcggtgggattggtcacctcggattagtcgattctttgatcggatatcgagtttt 15730495  T

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Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 10377826 - 10377911
Alignment:
Q  127 gctctgactttaaacggggcccc--acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtt 210  Q
    |||||||||| ||||||||||||  |||| |||||||||| |||| |||||| ||| |||| | | ||||||| ||||||||||||    
T  10377826 gctctgacttaaaacggggccccccacaagtgggcggtggcattggtcccctcggagtagtcggtccttggattggataccgagtt 10377911  T

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Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 14504148 - 14504082
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| ||| ||||||||||||||||||| || | |||||| ||| |||| |||||||||||||||||    
T  14504148 ccccgcaagtgggcggtgggattgatcctctcgaattagtcgatccttgtatcggataccgagtttt 14504082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 213
Target Start/End: Complemental strand, 21903724 - 21903618
Alignment:
Q  109 atacagagctt-gctctgagctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttg-gattagtagattcttggatcggatacc 205  Q
    ||||||||||| |||||| |||||| ||||||| ||||| ||| ||| |||||||||||| || ||||| |  ||||||| |||||||||||||||| |     
T  21903724 atacagagctttgctctg-gctctggctttaaatggggcaccagcaagtgggcggtgggaatggtccccctcagattagtcgattcttggatcggatgca 21903626  T
Q  206 gagttttc 213  Q
    ||||||||    
T  21903625 gagttttc 21903618  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 4797256 - 4797294
Alignment:
Q  174 ccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  4797256 ccttggattagtcgattcttggatcggataacgagtttt 4797294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 7491698 - 7491665
Alignment:
Q  180 attagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||||||||||||||||||    
T  7491698 attagtcgattcttggatcggataccgagttttc 7491665  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 12390536 - 12390620
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||| |||||||  ||| ||||||||||||||| |||||| |||||||| ||   ||  ||||||||||||||||||    
T  12390536 gctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcga---ttaaatcggataccgagttttc 12390620  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 33499608 - 33499672
Alignment:
Q  148 ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||| |||||| ||||||||   ||  |||| |||||||||||||||    
T  33499608 ccacaagtgggcggtgggattggtcccctcggattagtcagttgatggaccggataccgagtttt 33499672  T

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Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 19456296 - 19456210
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||||||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  19456296 gctctggctttaaacggggccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 19456210  T

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Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 41351189 - 41351103
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||| || ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  41351189 gctctggctttaaacggggctccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 41351103  T

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Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 7085712 - 7085625
Alignment:
Q  127 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||||    
T  7085712 gctctgactttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 7085625  T

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Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 8484747 - 8484660
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  8484747 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8484660  T

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Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 27498817 - 27498730
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  27498817 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 27498730  T

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Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 33709591 - 33709502
Alignment:
Q  125 gagctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||| ||||||||||| |||| |||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||    
T  33709591 gagctctggctttaaacgggacccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgtgttttc 33709502  T

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Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 22693054 - 22693132
Alignment:
Q  135 tttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  22693054 tttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 22693132  T

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Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 38684319 - 38684405
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| |||| ||| || |||||||||||| |||||| |||||||| ||||||||||||||||||||| |||||    
T  38684319 gctctggctttaaacgggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgatttttc 38684405  T

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Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 18207320 - 18207405
Alignment:
Q  129 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||||||||| ||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  18207320 tctggctttaaacgaggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 18207405  T

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Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 11926588 - 11926501
Alignment:
Q  127 gctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||||||||||| |  || |||| |||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  11926588 gctctggctttaaacggggccccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 11926501  T

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Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 11464992 - 11464913
Alignment:
Q  128 ctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccga 207  Q
    ||||| |||||||||||||||| ||| |||| |||||||||| |||||| | |||||| |||||||||||||||||||||    
T  11464992 ctctggctttaaacggggccccgcaagtgggtggtgggattggtcccctcgaattagtcgattcttggatcggataccga 11464913  T

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Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 15641191 - 15641105
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||    
T  15641191 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 15641105  T

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Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 28614569 - 28614486
Alignment:
Q  129 tctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||||||||  ||| || |||| |||||||||||||||||| | |||||| |||| |||||||||||||||||||||    
T  28614569 tctgactttaaacgggatcccgcagatggacggtgggattgatcccctcgaattagtcgatttttggatcggataccgagtttt 28614486  T

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Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 32059526 - 32059439
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| | | |||||||||||||||||||||||    
T  32059526 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 32059439  T

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Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 35425124 - 35425211
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| ||| || |||||||| ||||||||||||||||||||| |||||    
T  35425124 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcggattagtcgattcttggatcggataccgaattttc 35425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 131 - 212
Target Start/End: Complemental strand, 13659327 - 13659245
Alignment:
Q  131 tgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||| ||||  ||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||| ||||    
T  13659327 tgactttaaacgggacccccgcaagtgggcggtgggattgatcccctcggattaatcgattcttggatcggataccgaatttt 13659245  T

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Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 21236447 - 21236361
Alignment:
Q  128 ctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||||||||||  ||| ||||||||||||||  ||||||  ||||||| |||||||| ||||||||||||||||||    
T  21236447 ctctgactttaaacggggcccccgcaagtgggcggtgggattagtcccctcagattagtcgattcttgaatcggataccgagttttc 21236361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 37495194 - 37495252
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  37495194 tgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 37495252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 19145497 - 19145412
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||| ||  |||| ||| ||||||||||||||| |||||| |||||||| | ||||||||||||||||||||||||    
T  19145497 gctctggctttaaatggtcccccgcaagtgggcggtgggattggtcccctcggattagttggttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 13108534 - 13108458
Alignment:
Q  129 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 204  Q
    |||| ||||||||||||||||  ||| |||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  13108534 tctgcctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13108458  T

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Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 4603888 - 4603975
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||| ||||||||||| |||||| |||||||| | | |||||||||||||||||||||||    
T  4603888 gctctggctttaaacggggcccctgcaagtggacggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 4603975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 10869651 - 10869564
Alignment:
Q  127 gctctgactttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| |||||| || ||| ||||||||||||||| |||||| |||||||| | ||||||||||||||||| |||||||    
T  10869651 gctctggctttaaatggggcctccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccaagttttc 10869564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 13038534 - 13038463
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 204  Q
    ||||||||||||||||  ||| |||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  13038534 ctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttggatcggatac 13038463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 22392799 - 22392886
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| |||||||||| |||| ||||||  ||||||| |||| ||||||||||||||||||||||    
T  22392799 gctctggctttaaacggggcccccgcaagtgggcggtggaattggtcccctcagattagtcgatttttggatcggataccgagttttc 22392886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 30485959 - 30486026
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| ||||||||||||||| |||||| ||||||||  ||||||||||||||||||||||||||    
T  30485959 ccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttggatcggataccgagttttc 30486026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 38631045 - 38630978
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| ||||||||||||||| |||||| |||||| | |||||||||||||||||||||||||||    
T  38631045 ccccgcaagtgggcggtgggattggtcccctcggattaatcgattcttggatcggataccgagttttc 38630978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 5049248 - 5049333
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||| |||| ||||||| ||||||||||| |||| | | |||||| ||||||||||||| ||||| ||||||    
T  5049248 gctctggctttaaacgggcccccgcaaatggacggtgggattggtcccatcgaattagtcgattcttggatcgaataccaagtttt 5049333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 27487611 - 27487554
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||||| |||||||    
T  27487611 tgggcggtgggattggtcccctcggattagtcgattcttggatcggatacagagtttt 27487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 10631340 - 10631288
Alignment:
Q  161 gtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  10631340 gtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10631288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 23270601 - 23270522
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||| |||||  ||||||| ||||||||||| |||||| |||||||| ||||||||||| ||||||| ||||||    
T  23270601 ctttaaacggagcccccgcaaatggacggtgggattggtcccctcggattagttgattcttggattggataccaagtttt 23270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 31288028 - 31287945
Alignment:
Q  131 tgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||||||||  ||| ||||||||||||||| || ||| | |||||| | |||||||| ||||||||||||||||    
T  31288028 tgactttaaacggggcccccgcaagtgggcggtgggattggtctcctcgaattagtcggttcttggaccggataccgagttttc 31287945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 34310253 - 34310339
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||| |||| | || ||| ||||||||||| |||||| | |||| | ||||||||||||||||||||||||||    
T  34310253 gctctggctttaaacgggacccccataagtggacggtgggattggtcccctcgaattaatcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 12317240 - 12317154
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||| |||| ||||  ||| |||| ||||||||||||||| | ||||||||  |||||| |||||||||||||||||||    
T  12317240 gctctgactttaagcgggccccccgcaagtgggtggtgggattgatccc-tcggattagtcaattcttagatcggataccgagttttc 12317154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 6014366 - 6014280
Alignment:
Q  127 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||||||| || | ||| ||||||||| ||||  |||||| | |||||| ||||||||||||||||| ||||||||    
T  6014366 gctctggctttaaacggggtccacgcaagtgggcggtgagattagtcccctcgaattagtcgattcttggatcggatatcgagtttt 6014280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 9659377 - 9659311
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| ||| ||| ||||||||||| |||| | |||||||| ||||||||||| ||||||||||||||    
T  9659377 ccccgcaagtggacggtgggattggtcccttcggattagttgattcttggatgggataccgagtttt 9659311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 34049922 - 34050008
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| ||| |||| |||||| |||||| |||||||| ||||||   |||||||||||||||||    
T  34049922 gctctggctttaaacggggcccccgcaagtggtcggtaggattggtcccctcggattagttgattctcaaatcggataccgagtttt 34050008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 42006873 - 42006931
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||| |||| ||| ||||||||||| ||||||| ||||||||||||| |||||    
T  42006873 tgggcggtggaattgttccacttggattagttgattctttgatcggataccgaattttc 42006931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 5067390 - 5067447
Alignment:
Q  144 ggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcgga 201  Q
    |||||| ||| ||||||||||||||| ||||||  ||||||| |||||||||||||||    
T  5067390 ggccccgcaagtgggcggtgggattggtcccctctgattagtcgattcttggatcgga 5067447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 10813936 - 10813851
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||| ||||||||||| | || |||||||||  |||||||||||||||   |||||| | || ||||||||||||    
T  10813936 gctctggctttaaacagggccccacaagtaggtggtgggatttgtccccttggattagtcagttcttgaaccgaataccgagtttt 10813851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 41084123 - 41084180
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||| ||||||||||| | |||||||| | |||||| |||||||||||||||||    
T  41084123 tgggcggtaggattgatcccttcggattagtcggttcttgaatcggataccgagtttt 41084180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 3600045 - 3599997
Alignment:
Q  165 gattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||| |||||||| |||||||||||| ||||||||| ||||    
T  3600045 gattgatcccctcggattagtcgattcttggatctgataccgagatttc 3599997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 12398534 - 12398447
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| ||||||||  ||||||| ||||| ||||||||| ||   |||||| | ||||||||| |||||||||||||||    
T  12398534 gctctggctttaaatggggcccccgcaaatggacggtgagattgatcctctcaaattagtcggttcttggattggataccgagttttc 12398447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 7151454 - 7151500
Alignment:
Q  166 attgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| |||||| | |||||| ||||||||||||||||||||||||||    
T  7151454 attggtcccctagaattagtcgattcttggatcggataccgagtttt 7151500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 33737882 - 33737939
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||| ||||| |||||| || ||||| |||||||| ||||||||||||||||||    
T  33737882 tgggcggtgagattggtcccctcgg-ttagttgattcttgaatcggataccgagttttc 33737939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 15971208 - 15971151
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggatta 183  Q
    |||||||||||||||||| ||||  ||| ||||||||| |||||||||||| ||||||    
T  15971208 gctctgactttaaacgggacccccgcaagtgggcggtgagattgatcccctcggatta 15971151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 25750646 - 25750613
Alignment:
Q  179 gattagtagattcttggatcggataccgagtttt 212  Q
    ||||||| ||||||||||||||||||||||||||    
T  25750646 gattagtcgattcttggatcggataccgagtttt 25750613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 36895565 - 36895622
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||| ||||||| || ||| | |||||| | ||||||||||||||||||||||||    
T  36895565 tgggcggggggattgttctcctcgaattagtcggttcttggatcggataccgagtttt 36895622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 24165800 - 24165714
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||||||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  24165800 gctctggctttaaacggggccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagttttc 24165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 49258348 - 49258262
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||||||||||| |||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  49258348 gctctggctttaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 52821721 - 52821636
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  || ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  52821721 gctctggctttaaacggggccccgtaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 8097365 - 8097278
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  8097365 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 10083905 - 10083818
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||||||| |||| ||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  10083905 gctctggctttaaacggggcccccacaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10083818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 46576459 - 46576546
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| |||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  46576459 gctctggctttaaacggggcccccgcaagtgggcggtcggattggtccccttggattagtcgattcttggatcggataccgagttttc 46576546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 15566585 - 15566499
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| |||| ||| ||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||||    
T  15566585 gctctggctttaaacgggcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 15566499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 24407372 - 24407458
Alignment:
Q  127 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||||||||  | ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  24407372 gctctgactttaaacggggccatcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 10190828 - 10190741
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  10190828 gctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 10190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 40133535 - 40133448
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| | |||||| |||||||||||||||||||||||||||    
T  40133535 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 40133448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 45272502 - 45272415
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||||    
T  45272502 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagttgactcttggatcggataccgagttttc 45272415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 53424255 - 53424176
Alignment:
Q  134 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||| |||| ||| || |||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  53424255 ctttaaacgggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53424176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 54475799 - 54475878
Alignment:
Q  134 ctttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||| || ||| ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  54475799 ctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagtttt 54475878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 8456236 - 8456149
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||| ||||||||| |||||| |||||||| |||||||| ||||||||||||||||||    
T  8456236 gctctggctttaaacggggcccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttgaatcggataccgagttttc 8456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 26174244 - 26174311
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  26174244 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 26174311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 48977499 - 48977586
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| | | |||||||||||||||||||||||    
T  48977499 gctctggctttaaacggggcccctgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 48977586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 53848500 - 53848433
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  53848500 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 53848433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 1178283 - 1178368
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| |||||||||||  ||||||||||||||| |||| | |||||||| || ||||||||||||||||||||||||    
T  1178283 gctctggctttaaatggggccccacacgtgggcggtgggattggtccc-tcggattagtcgaatcttggatcggataccgagttttc 1178368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 4462751 - 4462829
Alignment:
Q  134 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||| ||| ||| ||||||||||||||| || ||||||||  |||||||||| ||||||||||||||    
T  4462751 ctttaaacggggccccgcaagtggacggtgggattgatccactcggattagtttattcttggattggataccgagtttt 4462829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 18176973 - 18176887
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||| | |||||||| |||||||||||||||||| |||||||    
T  18176973 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccatcggattagtcgattcttggatcggatacagagtttt 18176887  T

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Target: chr3; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 32151535 - 32151621
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| ||||||||| ||||| |||||| | |||||| ||||||||||||||||||||||||||    
T  32151535 gctctggctttaaacggggcccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 35493022 - 35493108
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||| | ||||||||||||    
T  35493022 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggattgaataccgagtttt 35493108  T

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Target: chr3; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 39041938 - 39041852
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| |||| |||||||||| ||| || |||||||| ||||||||||||||||||||||||||    
T  39041938 gctctggctttaaacggggcccccgcaagtgggtggtgggattggtccactcggattagtcgattcttggatcggataccgagtttt 39041852  T

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Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 25379872 - 25379957
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    |||||| ||||||||||||||||  |||  |||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||    
T  25379872 gctctggctttaaacggggcccccgcaagcgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttt 25379957  T

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Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 48104988 - 48105073
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    |||||| |||||||| ||||||| |||| ||||||||| ||||| |||| | |||||||| |||||||||||||||||||||||||    
T  48104988 gctctggctttaaacagggcccccacaagtgggcggtgagattggtcccttcggattagtcgattcttggatcggataccgagttt 48105073  T

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Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 2511383 - 2511296
Alignment:
Q  127 gctctgactttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||||||| || || ||| ||||||||||||||| || ||| | ||||||||||||||| |||||||||| |||||||    
T  2511383 gctctgactttaaacgggacctccgcaagtgggcggtgggattggtctcctcgaattagtagattcttgaatcggataccaagttttc 2511296  T

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Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 25289800 - 25289714
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||| | | |||||| |||||||||||||||||||||||||||    
T  25289800 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccc-tcgaattagtcgattcttggatcggataccgagttttc 25289714  T

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Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 30257735 - 30257822
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| ||||||||  ||| |||||||||| |||| |||||| |||||||| ||||||||||||||||||||| |||||    
T  30257735 gctctggctttaaatggggcccccgcaagtgggcggtggcattggtcccctcggattagtcgattcttggatcggataccgaattttc 30257822  T

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Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 45529840 - 45529754
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||    
T  45529840 gctctggctttaaacgggccccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 45529754  T

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Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 52455735 - 52455648
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||||||||||||  ||| ||   |||||||||| |||||| |||||||| ||||||||||| |||||||||||||||    
T  52455735 gctctgactttaaacggggcccccgcaagtgactggtgggattggtcccctcggattagtcgattcttggattggataccgagttttc 52455648  T

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Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 53233996 - 53233910
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| || |||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||    
T  53233996 gctctggctctaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattctt-gatcggataccgagttttc 53233910  T

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Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 21363054 - 21363140
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||||| |||||  ||| ||||||||||||||| | |||| |||||| | ||||||||||||||||||||||||||    
T  21363054 gctctggctttaaacggagcccccgcaagtgggcggtgggattggttccctcggattaatcgattcttggatcggataccgagtttt 21363140  T

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Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 50731323 - 50731237
Alignment:
Q  126 agctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||  || ||| || ||||| ||||||||||||||| ||||||  ||||||| ||| ||||||||||||||||||||||    
T  50731323 agctctgacttataaggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 50781531 - 50781617
Alignment:
Q  126 agctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||  || ||| || ||||| ||||||||||||||| ||||||  ||||||| ||| ||||||||||||||||||||||    
T  50781531 agctctgacttataaggggcccacacaagtgggcggtgggattggtcccctcagattagtcgatccttggatcggataccgagtttt 50781617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 4048094 - 4048147
Alignment:
Q  159 cggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  4048094 cggtgggattggtcccctcggattagttgattcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 30807239 - 30807152
Alignment:
Q  127 gctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||||||| |  || |||||||| |||||| |||| | |||||||| |||||||||||||||||||||||||||    
T  30807239 gctctggctttaaacggggccccccgcaagtgggcggtaggattggtccc-tcggattagtcgattcttggatcggataccgagttttc 30807152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 6041757 - 6041670
Alignment:
Q  127 gctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||||||||  ||||| |  |||||||||||| ||||| ||||||| ||||||| | |||||||||| |||||||||||||    
T  6041757 gctctgactttaaacgaagcccccctcaaatgggcggtgagattgttccccttagattagtcggttcttggatcagataccgagtttt 6041670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 33398547 - 33398468
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||||||||  ||| ||||||||||||||| | |||| | |||||| ||||||||||||||||||||| ||||    
T  33398547 ctttaaacggggcccccgcaagtgggcggtgggattggttccctcgaattagtcgattcttggatcggataccgaatttt 33398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 33698792 - 33698705
Alignment:
Q  127 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||| ||| |||||||| |||||||||| ||||||   |||||| |||||| ||||||||| ||||||||||    
T  33698792 gctctggctttaaacggggctcccgcaaatgggtggtgggattggtcccctcaaattagtcgattctcggatcggatgccgagttttc 33698705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 55371381 - 55371302
Alignment:
Q  126 agctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 204  Q
    ||||||| ||| ||||||||||| | ||| ||||||||||||||| |||||| |||||||| ||| ||||||||||||||    
T  55371381 agctctggcttaaaacggggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatccttggatcggatac 55371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 34492661 - 34492575
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||  |  ||||||| |||||||||||| |||||||||||||    
T  34492661 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccattcagattagttgattcttggatctgataccgagtttt 34492575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 3747730 - 3747779
Alignment:
Q  164 ggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  3747730 ggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3747779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 26158942 - 26159003
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccga 207  Q
    |||| ||| |||||||||||||||||||||| |||||||| | | |||||||||||||||||    
T  26158942 ccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggataccga 26159003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 212
Target Start/End: Original strand, 25017618 - 25017685
Alignment:
Q  144 ggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||| ||||||||||||||| | || |||||||||| ||||||||||||| ||||||||||||    
T  25017618 ggccccgcaagtgggcggtgggattggttcc-ttggattagtcgattcttggatcgaataccgagtttt 25017685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 7485613 - 7485531
Alignment:
Q  129 tctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| |||||||| || |||  ||| ||| ||||||||||| |||| | |||||||| ||||||||||||||||||||||||||    
T  7485613 tctggctttaaacaggcccctgcaagtggccggtgggattggtccc-tcggattagtcgattcttggatcggataccgagtttt 7485531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 8958101 - 8958034
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| ||||||||||||||| ||||||  ||||| | |||||||||||| ||||||||||||||    
T  8958101 ccccgcaagtgggcggtgggattggtcccctctgattaatcgattcttggatcagataccgagttttc 8958034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 40940936 - 40941023
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||||||||||| |||| |||| ||| |||||| |||||| | |||| |  ||||||| ||| ||||||||||||||    
T  40940936 gctctgactttaaacggggcccccacaagtgggtggtaggattggtcccctcgaattactcaattcttgaatcagataccgagttttc 40941023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 4252462 - 4252404
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 204  Q
    |||||||| ||| ||||||||||| |||||| |||||||| ||| ||||||||||||||    
T  4252462 ccccacaagtggacggtgggattggtcccctcggattagtcgatccttggatcggatac 4252404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 1692945 - 1693030
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||| || || |||| ||| ||||||||||||||   |||||  ||||||| |||||||| |||||||||||||||||    
T  1692945 gctctggctttagacaggcccccgcaagtgggcggtgggatttgccccctcagattagtcgattcttgaatcggataccgagtttt 1693030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 31537923 - 31537838
Alignment:
Q  128 ctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||| |||||||||| |||||  ||| ||||||||| ||||| |||||| | ||||||  |||||||||||||||| ||||||||    
T  31537923 ctctggctttaaacggagcccctgcaagtgggcggtgagattggtcccctcgaattagtcaattcttggatcggatatcgagtttt 31537838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 7195917 - 7196005
Alignment:
Q  126 agctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||| ||| |||| |||  ||||| ||||||||| ||||||  ||||||| ||||||| |||  ||||||||||||||    
T  7195917 agctctgactttaaatgggccccccacatgtgggcagtgggattggtcccctcagattagtcgattctttgattagataccgagttttc 7196005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 29915348 - 29915288
Alignment:
Q  134 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttg 194  Q
    ||||||||||| |||| ||| |||||||||||||||||||| | | |||||| ||||||||    
T  29915348 ctttaaacgggcccccgcaagtgggcggtgggattgatcccatcgaattagtcgattcttg 29915288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 29964501 - 29964441
Alignment:
Q  134 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttg 194  Q
    ||||||||||| |||| ||| |||||||||||||||||||| | | |||||| ||||||||    
T  29964501 ctttaaacgggcccccgcaagtgggcggtgggattgatcccatcgaattagtcgattcttg 29964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 32414637 - 32414581
Alignment:
Q  151 caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccga 207  Q
    |||||| |||||| |||||||||||||  |||||| ||||||| |||||||||||||    
T  32414637 caaatgagcggtgagattgatccccttaaattagtcgattcttagatcggataccga 32414581  T

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Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 1242085 - 1242139
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggat 181  Q
    |||||| |||||||||||| ||| ||| |||||||||| |||| |||||||||||    
T  1242085 gctctggctttaaacggggtcccgcaagtgggcggtggaattggtccccttggat 1242139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 11390758 - 11390800
Alignment:
Q  171 tccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||| |||||||||||||||||| ||||||||    
T  11390758 tcccctcggattagtcgattcttggatcggatactgagttttc 11390800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 14343374 - 14343304
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggat 197  Q
    |||||| ||||||||||   ||||||| || ||||| | |||||||||||| ||||||| |||||||||||    
T  14343374 gctctgcctttaaacggtatcccacaagtgagcggtagaattgatccccttagattagtcgattcttggat 14343304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 53288791 - 53288713
Alignment:
Q  134 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||| |||| || ||||| ||||  |||||| | |||||| |||| ||||||||| |||| ||||||    
T  53288791 ctttaaacggggccccgcaaacggacggtgagattagtcccctcgaattagtcgattattggatcggttaccaagtttt 53288713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 55287929 - 55287983
Alignment:
Q  159 cggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||  |||||||| |||||| |||| |||||||||||||||| |||||    
T  55287929 cggtgggattagtccccttgaattagtcgattattggatcggataccgaattttc 55287983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 9e-27; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 37351558 - 37351454
Alignment:
Q  109 atacagagcttgctctg--agctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccg 206  Q
    |||||||||||||||||  ||||||| ||||||||||| |||||||| ||||||||||||||| |||||| |||||||| | | ||||||||||||||||    
T  37351558 atacagagcttgctctggaagctctggctttaaacgggcccccacaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccg 37351459  T
Q  207 agttt 211  Q
    |||||    
T  37351458 agttt 37351454  T

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Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 26513233 - 26513148
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||||| |||||||| |||||||||||| || |||||| |||||||| ||||||||||||| ||||||||||||    
T  26513233 gctctgactttaaacgggcccccacaagtgggcggtgggaatggtcccctcggattagtcgattcttggatcgaataccgagtttt 26513148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 4621323 - 4621236
Alignment:
Q  127 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||| |||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  4621323 gctctggctttaaacggggtccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 4621236  T

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Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 8254838 - 8254751
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| |||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  8254838 gctctggctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcggataccgagttttc 8254751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 24122134 - 24122220
Alignment:
Q  127 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||| ||| ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  24122134 gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 7766813 - 7766726
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||| |||||||| |||||||||    
T  7766813 gctctgactttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttgaatcggatatcgagttttc 7766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 34778457 - 34778535
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    ||||||||||||||||  ||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  34778457 ctttaaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 7578520 - 7578607
Alignment:
Q  127 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||||||||||| | ||| |||| |||||||||| | |||| |||||||| |||| ||||||||||||||||||||||    
T  7578520 gctctgactttaaacggggccctcgcaagtgggtggtgggattggttccctcggattagttgatttttggatcggataccgagttttc 7578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 15059488 - 15059401
Alignment:
Q  127 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||| |||| ||| ||||||||| ||||| |||||| | |||||| |||||||||||||||||||||||||||    
T  15059488 gctctggctttaaacggggtccccgcaagtgggcggtgagattggtcccctcgaattagtcgattcttggatcggataccgagttttc 15059401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 32729655 - 32729742
Alignment:
Q  127 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| |||| |||| ||| ||||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  32729655 gctctggctttaaatggggtccccgcaagtgggcggtgggattgatccccttggattagtcggtctttggatcggataccgagttttc 32729742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 24674504 - 24674590
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| | |||||| ||||||||||||||||||||| ||||    
T  24674504 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgtattagtcgattcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 17935880 - 17935965
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    |||||| ||||||||||||||||  ||| |||||| |||||||| ||| || |||||||| |||||||||||||||||||||||||    
T  17935880 gctctggctttaaacggggcccccgcaagtgggcgatgggattggtccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 2272455 - 2272542
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||||||||||| ||||  ||||||| ||||||||||| | |||||||| ||||||  |||||||||| ||||||||    
T  2272455 gctctgactttaaacggggcccctacaagggggcggtaggattgatcccatcggattagtcgattctaagatcggatactgagttttc 2272542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 22909982 - 22910069
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||||| |||||  ||| ||||||||||||||  |||||| |||||||| ||| ||| |||||||||||||||||||    
T  22909982 gctctgactttaaacggagcccccgcaagtgggcggtgggatttgtcccctcggattagtcgatacttcgatcggataccgagttttc 22910069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 7197333 - 7197247
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||| ||||||  ||| ||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||||||    
T  7197333 gctctggctttaaacgaggcccctgcaagtgggcggtgagattggtcccctcggattagtcgattcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 27454921 - 27454863
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||||    
T  27454921 tgggcggtgggattggtcccctcggattagtcgattcttggatcggatacctagttttc 27454863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 48699877 - 48699957
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||| |||||  ||| ||||||||||||||| |||| | |||||||| ||||||||||||||||| |||||||||    
T  48699877 ctttaaacggagcccccgcaagtgggcggtgggattgttcccttcggattagtcgattcttggatcggatatcgagttttc 48699957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 8779815 - 8779744
Alignment:
Q  134 ctttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 204  Q
    |||||||||||||||| |||| | ||||||||||||| |||||| |||||||| ||||||| ||||||||||    
T  8779815 ctttaaacggggcccccacaagtaggcggtgggattggtcccctcggattagtcgattcttagatcggatac 8779744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 46607941 - 46608008
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| |||||||||||||||||||||| |||||||| | | ||||||||||||| |||||||||    
T  46607941 ccccgcaagtgggcggtgggattgatcccctcggattagtcggtccttggatcggatatcgagttttc 46608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 9500441 - 9500355
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||||| ||||| |||| ||||||||| ||||| || | | |||||||| ||||||||||||||||| ||||||||    
T  9500441 gctctggctttaaacggagcccccacaagtgggcggtgagattggtctcttcggattagtcgattcttggatcggatatcgagtttt 9500355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 21726847 - 21726921
Alignment:
Q  134 ctttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccga 207  Q
    ||||||||||| |||| |||| ||||||||||| ||||||||||  ||||| | |||||||||||||||||||||    
T  21726847 ctttaaacgggtcccccacaagtgggcggtggggttgatcccctcagattaatcgattcttggatcggataccga 21726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 35138119 - 35138185
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| ||| ||||||||||||||||| |||| |||||||| | | ||||||||||||||||||||||    
T  35138119 ccccgcaagtgggcggtgggattgattccctcggattagtcggtccttggatcggataccgagtttt 35138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 1379009 - 1379090
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgag 208  Q
    |||||| ||||||||||| |||| ||| ||| ||||| ||||| ||||||  ||||||| ||||||| ||||||||||||||    
T  1379009 gctctggctttaaacgggcccccgcaagtggacggtgagattggtcccctcagattagtcgattcttagatcggataccgag 1379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 40802154 - 40802069
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||||| |||| ||| |||| |||| ||||| ||| || | |||||| |||||||| |||| ||||||||||||    
T  40802154 gctctgactttaaacgggtccccgcaagtgggtggtgagattggtcctctagaattagtcgattcttgaatcgaataccgagtttt 40802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 14603947 - 14603994
Alignment:
Q  166 attgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| |||||| |||||||| |||||||||||||||||||||||||||    
T  14603947 attggtcccctcggattagtcgattcttggatcggataccgagttttc 14603994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 23041668 - 23041719
Alignment:
Q  161 gtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||| |||||| | |||||| ||||||||||||||||||||||||||    
T  23041668 gtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 5315478 - 5315528
Alignment:
Q  162 tgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||| |||||| |||| ||| ||||||||||||||||||||||||||    
T  5315478 tgggattggtcccctcggataagtcgattcttggatcggataccgagtttt 5315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 9926212 - 9926146
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| ||| |||||||||||||||||||| || ||||||| | | ||| ||||||||||||||||||    
T  9926212 ccccgcaactgggcggtgggattgatccctttagattagtcggtccttcgatcggataccgagtttt 9926146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 27159205 - 27159283
Alignment:
Q  135 tttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||| |||| ||| ||| ||||||||||| ||||||  ||||||| |||  |||||||||||| |||||||||    
T  27159205 tttaaacgggcccccgcaagtggacggtgggattggtcccctcagattagtcgatctttggatcggatatcgagttttc 27159283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 43770049 - 43769975
Alignment:
Q  128 ctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggat 202  Q
    ||||||| || || ||| |||||||||||||||||||||||| |||| | | |||||| |||||| |||||||||    
T  43770049 ctctgaccttgaatgggaccccacaaatgggcggtgggattggtcccttcgaattagtcgattctaggatcggat 43769975  T

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Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 18646964 - 18647045
Alignment:
Q  127 gctctgactttaaacggggccccacaaa-tgggcggtgggattgatccccttggattagtagattcttggatcggataccga 207  Q
    |||||| |||||||||| |||||   || ||||||||| |||||||||||| | |||||| |||||||| ||||||||||||    
T  18646964 gctctggctttaaacggagcccctgtaagtgggcggtgagattgatcccctcgaattagtcgattcttgaatcggataccga 18647045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 36155945 - 36155888
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||||||| |||| |   |||||| ||||||||||||||||||||||||||    
T  36155945 tgggcggtgggattggtcccttcaaattagtcgattcttggatcggataccgagtttt 36155888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 45331701 - 45331621
Alignment:
Q  134 ctttaaacggggc--cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||  ||| ||| ||| |||||||||| |||||||  ||||| | |||||||| |||||||||||||||||    
T  45331701 ctttaaacggggctccccgcaagtggacggtgggattaatcccctcagattaatcgattcttgaatcggataccgagtttt 45331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 18533808 - 18533724
Alignment:
Q  129 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||||||||  ||| ||||| ||||||||| ||||||   |||| | ||||||| ||||||||||| ||||||    
T  18533808 tctgactttaaacggggcccctgcaagtgggccgtgggattggtcccctcatattaatcgattcttagatcggataccaagtttt 18533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 30677307 - 30677374
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| ||||||||||||||| ||||||  ||||||| | |||||||| |||||| |||||||||    
T  30677307 ccccgcaagtgggcggtgggattggtcccctcagattagtcggttcttggaccggatatcgagttttc 30677374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 45859122 - 45859043
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||| |||||||  ||| |||| ||| |||||| |||||| |||||||| |||| |||||||||||||||| ||||    
T  45859122 ctttaaacagggcccccgcaagtgggtggtaggattggtcccctcggattagttgattattggatcggataccgaatttt 45859043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 23734234 - 23734315
Alignment:
Q  134 ctttaaacgggg--ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||  |||| ||| |||||||||  |||| ||||||  ||||||| |||||||| |||||||||| |||||||    
T  23734234 ctttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttc 23734315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 23741426 - 23741507
Alignment:
Q  134 ctttaaacgggg--ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||  |||| ||| |||||||||  |||| ||||||  ||||||| |||||||| |||||||||| |||||||    
T  23741426 ctttaaacggggccccccgcaagtgggcggtgaaattggtcccctcagattagtcgattcttgaatcggataccaagttttc 23741507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 809358 - 809419
Alignment:
Q  151 caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||||||||||| | || | ||| |||| ||||||||||| |||||| |||||||    
T  809358 caaatgggcggtgggattggttccttcggagtagtcgattcttggattggatactgagtttt 809419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 33905594 - 33905509
Alignment:
Q  129 tctgactttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| |||||||||||||| ||  || ||| ||||||||||||||||||   |||  | ||||||| |||||||||||||||||||    
T  33905594 tctggctttaaacggggcctccgtaagtggacggtgggattgatcccctcaaatttatcgattctttgatcggataccgagttttc 33905509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 8077758 - 8077841
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtt 210  Q
    |||||| |||||||| |||||||  ||| ||||||||||||||| ||||| | ||||| | |||| |||||||||| ||||||||    
T  8077758 gctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccc-tcgattaatcgattattggatcggagaccgagtt 8077841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 40145945 - 40145889
Alignment:
Q  148 ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 204  Q
    |||||| |||| |||| | ||| |||||| |||||||| ||||||||||||||||||    
T  40145945 ccacaagtgggtggtgagtttggtcccctcggattagtcgattcttggatcggatac 40145889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 5168 - 5081
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  5168 gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 5081  T

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Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 2751386 - 2751473
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  2751386 gctctggctttaaacggggcccccgcaaatgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 3851872 - 3851958
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  3851872 gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 21217912 - 21217832
Alignment:
Q  134 ctttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||| |||| |||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  21217912 ctttaaacgggccccccacaagtgggcggtgggattgatcccctcggattagttgattcttggatcggataccgagttttc 21217832  T

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Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 22120003 - 22120090
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  22120003 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 22120090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 40542996 - 40542909
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  40542996 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 40542909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 654790 - 654704
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| |||| ||| ||||||||||||||| |||||| |||||||| | |||||||||||||||||||||||||    
T  654790 gctctggctttaaacgggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggatcggataccgagttttc 654704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 21835266 - 21835353
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||||    
T  21835266 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatatcgagttttc 21835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 23092211 - 23092298
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||||||| ||||||||||| |||||| |||||||| ||||| |||||||||||||||||||||    
T  23092211 gctctggctttaaacggggcccccgcaaatggacggtgggattggtcccctcggattagtcgattcatggatcggataccgagttttc 23092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 29861785 - 29861872
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| |||||||||||||||||||||| | |||||| ||||||| |||||||||||||||||||    
T  29861785 gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcgaattagtcgattcttagatcggataccgagttttc 29861872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 7275392 - 7275478
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||| |||||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  7275392 gctctggctttaaacagggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 17197036 - 17196950
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||    
T  17197036 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 27312268 - 27312354
Alignment:
Q  128 ctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||||| |||||  ||| ||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||||||    
T  27312268 ctctgactttaaacggagcccccgcaagtgggcggtgggattggtcccctcagattagtcgattcttggatcggataccgagttttc 27312354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 22638403 - 22638488
Alignment:
Q  127 gctctgactttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    |||||| |||||||||||||| || ||| |||||||||||||||||| ||| | |||||| |||||||||||||||||||||||||    
T  22638403 gctctggctttaaacggggcctccgcaagtgggcggtgggattgatctcctcgaattagtcgattcttggatcggataccgagttt 22638488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 16374116 - 16374196
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||| ||||  ||||||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  16374116 ctttaaacgggacccccgcaaatggacggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 16374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 11997964 - 11998051
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||| |||||||  ||| ||||||||||||||| |||||| | |||||| |||||||||||||||||||||||||||    
T  11997964 gctctggctttaaactgggcccccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 11998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 42913599 - 42913512
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||| ||||||||||| |||||| |||||||| ||||||| |||||||||||||||||||    
T  42913599 gctctggctttaaacggggcccccgcaagtggacggtgggattggtcccctcggattagttgattcttagatcggataccgagttttc 42913512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 18044222 - 18044308
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||||||||||| |||| |||| ||||| |||| ||||||  ||||||| ||||||||||||||||||||||||||    
T  18044222 gctctggctttaaacggggcccccacaagtgggtggtggaattggtcccctcagattagtcgattcttggatcggataccgagtttt 18044308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 28089935 - 28090021
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| ||| |||| ||| |||||| || ||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  28089935 gctctggctttaaatgggcccccgcaagtgggcgatgagattggtcccctcggattagtcgattcttggatcggataccgagttttc 28090021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 19421346 - 19421431
Alignment:
Q  127 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||| || ||| |||||||| |||||||| ||| ||||||||||||    
T  19421346 gctctgactttaaatggggcgcccacaagtgggcggtgggattggtctcctcggattagtcgattcttgaatcagataccgagttt 19421431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 31712959 - 31712902
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  31712959 tgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 7175928 - 7175861
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||    
T  7175928 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggatactgagttttc 7175861  T

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Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 10091303 - 10091389
Alignment:
Q  127 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| |||| |||| ||| |||||||||||||||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  10091303 gctctggctttaaatggggtccccgcaagtgggcggtgggattgatcccctcggattagtcgattctt-gatccgataccgagttttc 10091389  T

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Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 22703601 - 22703688
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| |||||||| ||||||| ||||||||||| |||||||    
T  22703601 gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattctttgatcggatacccagttttc 22703688  T

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Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 31274029 - 31274115
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||| || ||| ||||| ||| ||||| |||||| | |||||| |||||||||| ||||||||||||||||    
T  31274029 gctctggctttaaacggggctccgcaagtgggcagtgagattggtcccctcgaattagtcgattcttggaccggataccgagttttc 31274115  T

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Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 31197712 - 31197792
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||||  ||| ||| ||||||||||| ||||||  ||||||| ||||||||||||||||| |||||||||    
T  31197712 ctttaaacggggcccccgcaagtggtcggtgggattggtcccctcagattagtcgattcttggatcggatatcgagttttc 31197792  T

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Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 23012594 - 23012507
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| |||||||| |||| ||||||||||||||| |||||| | ||||||  |||| | |||||||||||||||||||    
T  23012594 gctctggctttaaatggggcccccacaagtgggcggtgggattggtcccctcgtattagtcaattcattgatcggataccgagttttc 23012507  T

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Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 27009474 - 27009561
Alignment:
Q  127 gctctgactttaaacggggcccca-caaa-tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||||||||||  |||| ||| ||||||||||| ||||||   |||||| ||||||||||| ||||||||||||||    
T  27009474 gctctgactttaaacggggcccctgcaaagtggacggtgggattggtcccctcaaattagtcgattcttggattggataccgagtttt 27009561  T

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Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 43785377 - 43785298
Alignment:
Q  135 tttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||| || ||| ||| ||||| ||||| ||||||||||||||| |||| ||||||||||||||||| ||||    
T  43785377 tttaaacggggcctccgcaagtggacggtgagattggtccccttggattagtcgatttttggatcggataccgagctttc 43785298  T

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Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 25333519 - 25333603
Alignment:
Q  128 ctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||| || ||||  ||| ||||| ||||||||| |||||| |||||||| ||||||||||||||| ||||||||||    
T  25333519 ctctgactttaaacaggccccccgcaagtgggcagtgggattggtcccctcggattagtcgattcttggatcgga-accgagtttt 25333603  T

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Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 32849706 - 32849791
Alignment:
Q  127 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    |||||| ||||||| ||| | |||| || ||||| ||||||||| ||||||  ||||||| |||||||||||||||||||||||||    
T  32849706 gctctggctttaaatgggactcccataagtgggcagtgggattggtcccctcagattagtcgattcttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 1766217 - 1766149
Alignment:
Q  139 aacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccga 207  Q
    ||||||||||||||| |||||||| |||||| |||||| |||||||| | | |||| ||||||||||||    
T  1766217 aacggggccccacaagtgggcggttggattggtcccctcggattagtcggtacttgaatcggataccga 1766149  T

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Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 2344421 - 2344501
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||| ||||  ||| || |||||||||||| |||||| |||||||| | | |||||||||||||||||||||||    
T  2344421 ctttaaacgggacccccgcaagtgagcggtgggattggtcccctcggattagtcggtccttggatcggataccgagttttc 2344501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 9683942 - 9684026
Alignment:
Q  128 ctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    ||||| |||||||||||| |||||||| |||||||| |||| | |||||| |||||| | |||||||||||||  ||||||||||    
T  9683942 ctctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcgattcttggatcgattaccgagttt 9684026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 21574168 - 21574101
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||| | ||||||| ||||| |||||| |||||||| | | |||||||||||||||||||||||    
T  21574168 ccccacaagtaggcggtgagattggtcccctcggattagtcggtccttggatcggataccgagttttc 21574101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 8943467 - 8943409
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggatac 204  Q
    |||| ||| ||||||||| ||||| |||||||| |||||| ||||||||||||||||||    
T  8943467 ccccgcaagtgggcggtgtgattggtccccttgaattagtcgattcttggatcggatac 8943409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 41907599 - 41907514
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||| ||||||  ||| |||| |||||||||| |||||  | |||||| ||||||||||||||||||||||||||    
T  41907599 gctctggctttaaacgtggcccccgcaagtgggtggtgggattggtcccccag-attagtcgattcttggatcggataccgagtttt 41907514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 39145737 - 39145652
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||| |||  ||| ||| ||||||||||| |||||| | |||||| |||||||| ||| |||||| ||||||    
T  39145737 gctctggctttaaacgggcccctgcaagtggacggtgggattggtcccctcgaattagtcgattcttgaatcagataccaagtttt 39145652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 2103170 - 2103255
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| ||||||||  ||| ||||||||||||||| |||| | |||||||| ||||| || ||||||||||||||||||    
T  2103170 gctctggctttaaatggggcccccgcaagtgggcggtgggattggtccc-tcggattagtcgattcatg-atcggataccgagttttc 2103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 9718073 - 9717986
Alignment:
Q  127 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||| |||||||| ||||||| |||| || ||| | |||||| | |||||| |||| |||| ||||||||    
T  9718073 gctctggctttaaacggggccctcacaaatgagcggtggaattggtctcctcgaattagtcggttcttgaatcgaatactgagttttc 9717986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 27704136 - 27704202
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| ||| |||| |||| ||||||||||||  ||||||| |||||||| ||| |||||||||||||    
T  27704136 ccccgcaagtgggtggtgtgattgatcccctcagattagtcgattcttgaatcagataccgagtttt 27704202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 28950986 - 28951072
Alignment:
Q  127 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||| ||| | ||| | ||||||||||||| |||||| | | |||   |||||||||||||||||||||||||    
T  28950986 gctctggctttaaacgggtccctcgcaagtcggcggtgggattggtcccctcgaactagacaattcttggatcggataccgagtttt 28951072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 36772389 - 36772303
Alignment:
Q  127 gctctgactttaaacggggccccacaaa-tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||    | |||||||||| |||  ||| || |||||||| ||||||| ||||||||||||||||||    
T  36772389 gctctggctttaaacggggcccccgggagtgggcggtggaattagtcctctcggattagtcgattctttgatcggataccgagtttt 36772303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 17212202 - 17212247
Alignment:
Q  160 ggtgggattgatccccttggattagtagattcttggatcggatacc 205  Q
    |||||||||| |||||| |||||||| |||||||||||| ||||||    
T  17212202 ggtgggattggtcccctcggattagtcgattcttggatcagatacc 17212247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 30345564 - 30345511
Alignment:
Q  157 ggcggtgggattgatccccttggattagtagattcttggatcggataccgagtt 210  Q
    ||||||||||||| |||||| || ||||| | ||||| ||||||||||||||||    
T  30345564 ggcggtgggattggtcccctcgggttagtcggttcttagatcggataccgagtt 30345511  T

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Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 264485 - 264400
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  264485 gctctggctttaaacgggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaatttt 264400  T

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Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 651436 - 651521
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  651436 gctctggctttaaacgggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaatttt 651521  T

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Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 837171 - 837256
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  837171 gctctggctttaaacgggcccccacaaatgggcggtgagattgatcccctcgaattagtcgattcttggatcggataccgaatttt 837256  T

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Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 28193589 - 28193674
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    |||||| |||||||||||||||| |||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  28193589 gctctggctttaaacggggcccctacaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 2639497 - 2639410
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  2639497 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 2639410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 3734709 - 3734622
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||||||||| ||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  3734709 gctctggctttaaacggggcccccgcaaatgggcagtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 3734622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 4718760 - 4718847
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  4718760 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 4718847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 8765612 - 8765525
Alignment:
Q  127 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||| ||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  8765612 gctctggctttaaacggggctcccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 8765525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 32879394 - 32879481
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||| |||||||||||||| |||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||||||||||    
T  32879394 gctctgacattaaacggggcccccacaagtgggcggtgggattggtcccctcggattagtcgattcttggattggataccgagttttc 32879481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 39349371 - 39349458
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  39349371 gctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccaagttttc 39349458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 21603345 - 21603431
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  21603345 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 34237741 - 34237654
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| || |||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  34237741 gctctggctttaaacggggcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34237654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 10292169 - 10292255
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||||||||||| |||| ||||||||||||||| |||| | |||||||| ||||||||||||| ||||||||||||    
T  10292169 gctctggctttaaacggggcccccacaagtgggcggtgggattggtcccttcggattagttgattcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 14633091 - 14633156
Alignment:
Q  148 ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  14633091 ccacaagtgggcggtgggattggtccccttggattagtcgattcttggatcggataccaagttttc 14633156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 2618301 - 2618388
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||| |||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||| ||||||||||    
T  2618301 gctctggctttaaacggagcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggattccgagttttc 2618388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 42328119 - 42328206
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||||||| |||| ||| || |||||||| |||||| | |||||| |||||||||||||||||||||||||||    
T  42328119 gctctggctttaaacggggcccccacaagtggacgatgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 42328206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 42643188 - 42643118
Alignment:
Q  142 ggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||| ||| ||||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||    
T  42643188 ggggccccgcaagtgggcggtgggattggtcccctcgcattagttgattcttggatcggataccgagtttt 42643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 20306023 - 20306110
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| | |||||| ||| |||||||||||||||||||||||    
T  20306023 gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttc 20306110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 21092656 - 21092743
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| ||||  ||| ||||||||||||||| |||||| | |||||| ||| |||||||||||||||||||||||    
T  21092656 gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcgaattagtcgatccttggatcggataccgagttttc 21092743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 19471724 - 19471812
Alignment:
Q  127 gctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||||||| |  || |||||| |||||||| |||||| | |||||| ||| |||||||||||||||||||||||    
T  19471724 gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19471812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 19542648 - 19542736
Alignment:
Q  127 gctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||||||| |  || |||||| |||||||| |||||| | |||||| ||| |||||||||||||||||||||||    
T  19542648 gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19542736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 19590048 - 19589960
Alignment:
Q  127 gctctgactttaaacggggccccac--aaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||||||| |  || |||||| |||||||| |||||| | |||||| ||| |||||||||||||||||||||||    
T  19590048 gctctggctttaaacggggccccccgcaagtgggcgatgggattggtcccctcgaattagtcgatacttggatcggataccgagttttc 19589960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 25248463 - 25248547
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||| || | ||| ||||||||||||||| |||||| |||||||| |||| || ||||||||||||||||||    
T  25248463 gctctggctttaaacgggccctcgcaagtgggcggtgggattggtcccctcggattagtcgatt-tttgatcggataccgagtttt 25248547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 28088401 - 28088478
Alignment:
Q  127 gctctgactttaaacggggcc-ccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggata 203  Q
    |||||||||||||| |||||| || ||| ||||||||||||||||||||||  || |||| |||||||||||||||||    
T  28088401 gctctgactttaaatggggcctccgcaagtgggcggtgggattgatcccctcagaatagtcgattcttggatcggata 28088478  T

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Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 4698809 - 4698722
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||| |||||  ||| || |||||||||||| |||||| |||||||| ||||| ||||| |||||||||||||||    
T  4698809 gctctggctttaaacggagcccccgcaagtgagcggtgggattggtcccctcggattagtcgattcatggattggataccgagttttc 4698722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 12312968 - 12313046
Alignment:
Q  134 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||| ||| |||||||| |||||||||||||||||||||| | |||||| | ||||| || |||| ||||||||||    
T  12312968 ctttaaatgggcccccacaagtgggcggtgggattgatcccctcgaattagtcggttcttagagcggaaaccgagtttt 12313046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 18128628 - 18128714
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| ||| ||  ||||||| | ||||||||||| ||||||||||||    
T  18128628 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcctctcagattagtcggttcttggatcgaataccgagtttt 18128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 15259492 - 15259407
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    |||||| ||||||||||||||||  ||| |||||||||  |||| |||||| | |||||| |||||||||||||||| ||||||||    
T  15259492 gctctggctttaaacggggcccccgcaagtgggcggtgtaattggtcccctcgaattagtcgattcttggatcggatgccgagttt 15259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 34610773 - 34610686
Alignment:
Q  127 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||| | ||| | ||| |||||||| | |||| |||||| | |||||| |||||||||||||||||||||||||||    
T  34610773 gctctggctttaaacgagcccctcgcaagtgggcggtagaattggtcccctcgaattagtcgattcttggatcggataccgagttttc 34610686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 6953093 - 6953008
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||| |||||||  ||| | ||||||||||||| |||| | |||||||| ||||||||||||| ||||||||||||    
T  6953093 gctctggctttaaacagggcccccgcaagttggcggtgggattggtccc-tcggattagtcgattcttggatcgaataccgagtttt 6953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 7558034 - 7557952
Alignment:
Q  129 tctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    |||| ||||||||||  |||| ||| ||| ||||||||||| |||||| | |||||| |||| ||| ||||||||||||||||    
T  7558034 tctggctttaaacggacccccgcaagtggacggtgggattggtcccctcgaattagtcgatttttgcatcggataccgagttt 7557952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 16990727 - 16990785
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||| || ||||||||||||||| | | ||||||||||||||| |||||||    
T  16990727 tgggcggtgggactggtccccttggattagtcggtccttggatcggataccaagttttc 16990785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 18532263 - 18532300
Alignment:
Q  176 ttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||| |||||||||||||||||||||||||||    
T  18532263 ttggattagtcgattcttggatcggataccgagttttc 18532300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 27746421 - 27746334
Alignment:
Q  127 gctctgactttaaacggggccccacaaatggg-cggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| |||||||||||| |||| || ||| |||  |||||| |||||||| ||||||||||||| ||| ||| |||||    
T  27746421 gctctggctttaaaaggggccccacaagtggggcgatggaattagtcccctcggattagtcgattcttggatcgaatatcgatttttc 27746334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 2166831 - 2166897
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| ||| ||||||||||||||| ||||||  ||||||| |||| || ||| ||||||||||||||    
T  2166831 ccccgcaagtgggcggtgggattggtcccctcagattagtcgattttttgattggataccgagtttt 2166897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 9713621 - 9713655
Alignment:
Q  178 ggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||| ||||||||||||||||||||||||||    
T  9713621 ggattagtcgattcttggatcggataccgagtttt 9713655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 20470052 - 20470117
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| ||| ||||||||||||||| | || | |||||||| |||| |||||||||||||||||||||    
T  20470052 ccccgcaagtgggcggtgggattggttcc-tcggattagtcgatttttggatcggataccgagtttt 20470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 1219466 - 1219551
Alignment:
Q  129 tctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| |||||||||||| ||||| || |||||||| |||| | |||| | |||||||| ||||||| ||||| ||||||| |||||    
T  1219466 tctggctttaaacggggcccccataagtgggcggtaggatcggtcccttcggattagtcgattcttagatcgaataccgaattttc 1219551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 28964150 - 28964234
Alignment:
Q  129 tctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| |||||||||||| |||| ||| ||||| ||||||||| |||||| | |||||| ||||||| ||||| |||| ||||||||    
T  28964150 tctggctttaaacggggcccccgcaagtgggc-gtgggattggtcccctcgaattagtcgattcttagatcgaatactgagttttc 28964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 8387512 - 8387460
Alignment:
Q  159 cggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    |||||||||||||| ||| |||||||| ||| ||| |||||||||| ||||||    
T  8387512 cggtgggattgatctcctcggattagttgatccttagatcggatactgagttt 8387460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 10544956 - 10544924
Alignment:
Q  181 ttagtagattcttggatcggataccgagttttc 213  Q
    ||||| |||||||||||||||||||||||||||    
T  10544956 ttagtcgattcttggatcggataccgagttttc 10544924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 19660618 - 19660531
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||| |||||||  ||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  19660618 gctctggctttaaacagggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttc 19660531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 34844844 - 34844757
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  34844844 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 34844757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 40058938 - 40058851
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  40058938 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttc 40058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 52983730 - 52983815
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  52983730 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 5609288 - 5609201
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| ||||||||  ||| ||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  5609288 gctctggctttaaatggggcccccgcaagtggacggtgggattgatcccctcggattagtcgattcttggatcggataccgagttttc 5609201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 32986308 - 32986395
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||| |||||| ||| |||| |||||||||||||||||||||||||||    
T  32986308 gctctgactttaaatggggcccccgcaagtgggcggtgggattggtcccctcggaatagtcgattcttggatcggataccgagttttc 32986395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 44343625 - 44343712
Alignment:
Q  127 gctctgactttaaacggggc-cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||| |||||| | |||||| |||||||| ||||||||||||||||||    
T  44343625 gctctgactttaaacggggctcccgcaagtgggcggtgggattggtcccctcgaattagtcgattcttgaatcggataccgagttttc 44343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 27528881 - 27528794
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||| ||||||||||  ||| ||||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  27528881 gctctggctttatacggggcccccgcaagtgggcggtgagattggtcccctcggattagtcgattcttggatcggataccgagttttc 27528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 18875602 - 18875516
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||| |||||||| ||||  |||||||||||||||| ||||||||  ||| ||||||| ||||||||||||||    
T  18875602 gctctggctttaaacgggcccccacaagtgggtagtgggattgatcccctcggattagtcaatttttggatcagataccgagttttc 18875516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 34723910 - 34723996
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| |||| |||||||||| ||| || |||||||| ||||||||||||||||||||||||||    
T  34723910 gctctggctttaaacggggcccccgcaagtgggtggtgggattggtcctctcggattagtcgattcttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 55961839 - 55961753
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | || | |||||| | |||||||| |||| ||||||| |||||    
T  55961839 gctctgactttaaacggggccccacaagtgggcggtgggattggttccttcggattaatcgattcttgaatcgaataccgaattttc 55961753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 35229278 - 35229365
Alignment:
Q  127 gctctgactttaaacggggcccc--acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||||| ||||  |||| || |||||||||||| |||||| | |||||| ||||||||||||||||||||| ||||    
T  35229278 gctctgactttaaacgggtccccccacaagtgagcggtgggattggtcccctcgaattagtcgattcttggatcggataccgaatttt 35229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 46714511 - 46714591
Alignment:
Q  134 ctttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||||  ||| ||||||||||||||| |||||| ||||||||  ||||||| ||||||||||||||||||    
T  46714511 ctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcaattcttgaatcggataccgagttttc 46714591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 32990546 - 32990633
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| ||| |||| ||||||||||||| |||| ||||||||    
T  32990546 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggactagtcgattcttggatcgaatactgagttttc 32990633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 45787790 - 45787703
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||| |||||||  ||| ||| ||||||||||| |||||| | |||||| |||||||||||||||||||||||||||    
T  45787790 gctctggctttaaacagggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattcttggatcggataccgagttttc 45787703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 54127428 - 54127341
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| | |||||||| ||||||| ||||||||    
T  54127428 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggttcttggaccggatactgagttttc 54127341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 22488112 - 22488027
Alignment:
Q  129 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||||||   |||||| | | ||||||||||||||| |||||||    
T  22488112 tctggctttaaacggggcccccgcaaatgggcggtgggattgatcccctcaaattagtcggtccttggatcggataccaagttttc 22488027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 23639768 - 23639821
Alignment:
Q  159 cggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  23639768 cggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 23645426 - 23645479
Alignment:
Q  159 cggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||    
T  23645426 cggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 126 - 212
Target Start/End: Original strand, 51535730 - 51535818
Alignment:
Q  126 agctctgactttaaacggggcccca--caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||| ||||||||||||||||   ||| ||||||||||||||| |||||| | |||||| ||||||| ||||||||||||| ||||    
T  51535730 agctctggctttaaacggggcccccagcaagtgggcggtgggattggtcccctcgaattagtcgattcttagatcggataccgaatttt 51535818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 52494628 - 52494685
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||    
T  52494628 tgggcggtgggattggtcccctcgaattagtcgattcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 20078070 - 20077986
Alignment:
Q  127 gctctgactttaaacggggccccacaaa-tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtt 210  Q
    |||||| ||||||||||||||||   || ||||||||||||||  | |||| |||||||| ||||||||||||||||||||||||    
T  20078070 gctctggctttaaacggggcccccgtaagtgggcggtgggattagttccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 4064991 - 4065057
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||| ||||||||||||||| |||||| |||||||| |||| |||||||||||| ||| ||||    
T  4064991 ccccacaagtgggcggtgggattggtcccctcggattagtcgatttttggatcggatatcgaatttt 4065057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 9978575 - 9978509
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| ||| ||||||||||||||| |||| | |||||||| ||||||| ||||||||||||||||||    
T  9978575 ccccgcaagtgggcggtgggattggtcccatcggattagttgattcttagatcggataccgagtttt 9978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 20566461 - 20566547
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| |||||||||| |||||  ||| |||||| |||||||| ||||||  ||||||| ||||||||||||||||| ||||||||    
T  20566461 gctctggctttaaacggagcccccgcaagtgggcgctgggattggtcccctcagattagtcgattcttggatcggatatcgagtttt 20566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 51595133 - 51595219
Alignment:
Q  127 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||||||||||  |||| ||| ||| |||||| ||||||| | | |||||| | ||||||||||||||||||||||||||    
T  51595133 gctctgactttaaacgggatccccgcaagtggacggtggaattgatctcttcggattaatcgattcttggatcggataccgagtttt 51595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 9517727 - 9517650
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggata 203  Q
    |||||||||||||||||||||||  ||  |||| |||| ||||| |||||| |||||||| |||||||||||||||||    
T  9517727 gctctgactttaaacggggcccccgcaggtgggtggtgagattggtcccctcggattagtcgattcttggatcggata 9517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 13550320 - 13550404
Alignment:
Q  128 ctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    ||||| |||||||||||| |||||||| |||||||| |||| | |||||| |||||| | |||||||||||||  ||||||||||    
T  13550320 ctctggctttaaacggggtccccacaagtgggcggtaggataggtcccctcggattaatcgattcttggatcgattaccgagttt 13550404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 23131499 - 23131435
Alignment:
Q  149 cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||| |||||||| |||||| |||||| | |||||| ||||||| |||||||||||||||||||    
T  23131499 cacaagtgggcggtaggattggtcccctcgaattagtcgattcttcgatcggataccgagttttc 23131435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 4912037 - 4912124
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||| |||||  ||| |||| |||| |||||||||||  | |||||| |||||||||||| ||||||||||||||    
T  4912037 gctctggctttaaacggagcccccgcaagtgggtggtgtgattgatccccccgaattagtcgattcttggatcagataccgagttttc 4912124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 36131592 - 36131509
Alignment:
Q  131 tgactttaaacggggccccacaaa-tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||||||||||| ||||   || ||||||||||||||| |||||| |||||||| |||| || |||| ||||||||||||||    
T  36131592 tgactttaaacgggacccccgtaagtgggcggtgggattggtcccctcggattagtcgattattagatcagataccgagttttc 36131509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 7392022 - 7391964
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||| |||||| |||||||| | ||||| ||| |||||||||||||||    
T  7392022 tgggcggtgggattgttcccctcggattagtcggttcttcgattggataccgagttttc 7391964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 33696365 - 33696279
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||| ||||||||  ||| ||||||||| ||||| ||| || ||||||||  |||||||||||||||| ||||||||    
T  33696365 gctctggctttaaatggggcccccgcaagtgggcggtgagattggtcctctcggattagtcaattcttggatcggatatcgagtttt 33696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 43719144 - 43719086
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    ||||||||||||||| ||  || |||||||| ||||||||||||||||||||| |||||    
T  43719144 tgggcggtgggattggtcatctcggattagtcgattcttggatcggataccgaattttc 43719086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 212
Target Start/End: Original strand, 49287976 - 49288054
Alignment:
Q  134 ctttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||  ||| ||| |||||| || ||||| |||||| |||||||| |||||||||||| ||||| |||||||    
T  49287976 ctttaaacgggctcccgcaagtgggcgctgagattggtcccctcggattagtcgattcttggatcagatactgagtttt 49288054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 37302619 - 37302684
Alignment:
Q  147 cccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||| |||||| |||||||| |||| | |||||||| |||||||| |||||||||||| ||||    
T  37302619 cccacaagtgggcgatgggattggtcccttcggattagtcgattcttgaatcggataccgaatttt 37302684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 21387571 - 21387486
Alignment:
Q  127 gctctgactttaaacgggg-ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||||  |||| ||| |||||||||||  || |||||| |||||||| |||| |||||||||||||| |||||||    
T  21387571 gctctggctttaaacgggatccccgcaagtgggcggtggg--tggtcccctcggattagtcgattattggatcggataccaagttttc 21387486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 13584340 - 13584253
Alignment:
Q  127 gctctgactttaaacggggccc-cacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||| |||||||| ||||||| |||| || ||| | |||||| | |||||| |||| |||| ||||||||    
T  13584340 gctctggctttaaacggggccctcacaaatgagcggtggaattggtctcctcgaattagtcggttcttgaatcgaatactgagttttc 13584253  T

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Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 27574429 - 27574516
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| ||||||||  ||| ||||||||| | ||| |||||| |||||| |  ||||||||||||||||| ||||||||    
T  27574429 gctctggctttaaaaggggcccccgcaagtgggcggtgagtttggtcccctcggattaatcaattcttggatcggatactgagttttc 27574516  T

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Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 53787143 - 53787056
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| |||||||||| |||||  ||||||||||||||||||  ||||||  ||||||| | || |||||||| |||||| ||||||    
T  53787143 gctctggctttaaacggagcccccgcaaatgggcggtgggattagtcccctcagattagtcggtttttggatcgaataccgggttttc 53787056  T

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Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 25852362 - 25852412
Alignment:
Q  162 tgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||| |||||| |||||||| | |||||||| |||||||||||||||    
T  25852362 tgggattggtcccctcggattagtcggttcttggaccggataccgagtttt 25852412  T

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Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 33289189 - 33289251
Alignment:
Q  150 acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||| ||| ||||| ||||  |||||| |||||||| |||||||||||||||||||| |||||    
T  33289189 acaagtggacggtgagattagtcccctcggattagtcgattcttggatcggataccgggtttt 33289251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 41621669 - 41621583
Alignment:
Q  126 agctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    ||||||||||||||| |||| ||| |||| |||| ||||||| | |||||||  ||||||| | | ||||||||||||| |||||||    
T  41621669 agctctgactttaaatggggtccctacaagtgggtggtgggactaatcccctcagattagtcggtccttggatcggataacgagttt 41621583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 17637908 - 17637852
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||  |||| |||||| |||||||| |||||||| |||||||||||||||||    
T  17637908 tgggcggtgatattggtcccctcggattagtcgattcttg-atcggataccgagtttt 17637852  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 6427102 - 6427185
Alignment:
Q  129 tctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||||||| |||||||||||| ||| | ||||||||||  |||| |||||||| | | |||||  ||||||||||||||||    
T  6427102 tctggctttaaatggggccccacaagtggacagtgggattgaatccctcggattagtcggtccttgg-ccggataccgagttttc 6427185  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 9646273 - 9646217
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    ||||| |||||||||||||||| |||||||| | |  ||||||||| ||||||||||    
T  9646273 tgggcagtgggattgatcccctcggattagtcggtcattggatcgggtaccgagttt 9646217  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 20527111 - 20527035
Alignment:
Q  135 tttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    ||||||| |||||||  || |||||||| |||||| || ||| |||||||| |||| |||||||  |||||||||||    
T  20527111 tttaaacagggccccgtaagtgggcggtaggattggtctcctcggattagtcgatttttggatcaaataccgagttt 20527035  T

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Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 24672337 - 24672305
Alignment:
Q  180 attagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||||||||||||    
T  24672337 attagtcgattcttggatcggataccgagtttt 24672305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 25969587 - 25969504
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttt 211  Q
    |||||| ||||||||||| ||||  || || |||||||||||| | |||| | |||||| |||||||| ||||||||| ||||||    
T  25969587 gctctggctttaaacgggcccccgtaagtgagcggtgggattggt-ccctcgaattagtcgattcttgaatcggatactgagttt 25969504  T

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Target: scaffold0217 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 7394 - 7309
Alignment:
Q  128 ctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||| ||||||    
T  7394 ctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccaagtttt 7309  T

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Target: scaffold0102 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 39205 - 39290
Alignment:
Q  129 tctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||    
T  39205 tctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttc 39290  T

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Target: scaffold0328 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 133 - 212
Target Start/End: Complemental strand, 13127 - 13047
Alignment:
Q  133 actttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||||  ||| ||| ||||||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  13127 actttaaacggggcccccgcaagtggacggtgggattgatcccctcagattagttgattcttggatcggataccgagtttt 13047  T

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Target: scaffold0070 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 40436 - 40522
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||| | |||||||| |||||||||||||||||||||||||||    
T  40436 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtccc-tcggattagtcgattcttggatcggataccgagttttc 40522  T

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Target: scaffold0049 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 66865 - 66951
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| |||||||| | | ||||||||||||||||||||||    
T  66865 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcggtccttggatcggataccgagtttt 66951  T

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Target: scaffold0019 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 161940 - 162007
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| ||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||    
T  161940 ccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcagataccgagttttc 162007  T

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Target: scaffold0459 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 10779 - 10694
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| |||||||||||| ||| ||||||||||| |||||| | ||||||  |||||| |||||||||||||||||||    
T  10779 gctctggctttaaatggggccccacaagtggacggtgggattggtcccctcgaattagtcaattctt-gatcggataccgagttttc 10694  T

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Target: scaffold0051 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 52957 - 52870
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||  |||||||| |||||| ||| || |||||||| |||||||| ||||||||||||||||||    
T  52957 gctctggctttaaacggggcccccgcaggtgggcggtaggattggtcctctcggattagtcgattcttgaatcggataccgagttttc 52870  T

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Target: scaffold1175 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 2512 - 2426
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||||||||||||  ||| ||||||||||||||| |||||| ||||||||   | |||| |||||||||||||||||    
T  2512 gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtccgtccttgaatcggataccgagtttt 2426  T

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Target: scaffold0199 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 8508 - 8451
Alignment:
Q  155 tgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||||||| ||| || |||||||| ||||||| ||||||||||||||||||    
T  8508 tgggcggtgggattggtccgctcggattagtcgattcttagatcggataccgagtttt 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 9385 - 9299
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||| ||||||||  ||| ||| ||||||||||| |||||| | |||||| ||||||| |||||||||||||||||||    
T  9385 gctctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagttttc 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 12086 - 12000
Alignment:
Q  127 gctctgactttaaacggggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatc-ggataccgagttttc 213  Q
    |||||| ||||||| |||||||||||| ||| ||||||||||| |||||| | ||||||  |||||| |||| |||||||||||||||    
T  12086 gctctggctttaaatggggccccacaagtggacggtgggattggtcccctcgaattagtcaattctt-gatcgggataccgagttttc 12000  T

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Target: scaffold0068 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 41730 - 41644
Alignment:
Q  127 gctctgactttaaacggggcccc-acaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||||| ||||||||||||||||  ||| |||||  |||||||| |||||| |||||||| ||||||| |||||||||| ||||||||    
T  41730 gctctggctttaaacggggcccctgcaagtgggcaatgggattggtcccctcggattagtcgattctt-gatcggatacagagttttc 41644  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 32419 - 32485
Alignment:
Q  146 ccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagttttc 213  Q
    |||| ||| |||| |||||||||| |||||| |||||||| |||||||| ||||||||||||||||||    
T  32419 ccccgcaagtgggtggtgggattggtcccctcggattagtcgattcttg-atcggataccgagttttc 32485  T

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Target: scaffold0623 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 1142 - 1057
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||| ||||||| ||||||||  ||| ||| ||||||||||| |||||| | |||||| ||||||| ||||||||||||||||||    
T  1142 gctctggctttaaatggggcccccgcaagtggacggtgggattggtcccctcgaattagtcgattctt-gatcggataccgagtttt 1057  T

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Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 212
Target Start/End: Complemental strand, 97452 - 97366
Alignment:
Q  127 gctctgactttaaacggggcccca-caaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    |||||||||||||||||| ||||  ||| ||||||||||||||| ||| || | |||||| | || ||||| |||||||||||||||    
T  97452 gctctgactttaaacgggacccccgcaagtgggcggtgggattggtcctctcgtattagtcggtttttggaccggataccgagtttt 97366  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 123134 - 123066
Alignment:
Q  143 gggccccacaaatgggcggtgggattgatccccttggattagtagattcttggatcggataccgagtttt 212  Q
    ||||||||||| || | |||||||||| |||||| |||||| | || |||||||||||||||| ||||||    
T  123134 gggccccacaagtgtgtggtgggattggtcccctcggattaatcga-tcttggatcggataccaagtttt 123066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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