View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12835_low_29 (Length: 222)
Name: NF12835_low_29
Description: NF12835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12835_low_29 |
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Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 15 - 206
Target Start/End: Original strand, 26578841 - 26579032
Alignment:
| Q |
15 |
cagagataaagatcaaaagtgactccaacattgaaagagtaattacttccacatctcttaacaaactaaccaaagtcactttttcatgatccttattgtt |
114 |
Q |
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| T |
26578841 |
cagagataaagatcaaaagtgactctaacattgaaagagtaattacttccacatctcttaacaaactaaccaaactcactttttcatgatccttattgtt |
26578940 |
T |
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| Q |
115 |
gctaggagataatagttttcctttacctttcttcacattagccttcaaattctccaaagctttgaggattgctttctttactaccttcctag |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26578941 |
gctaggagataatagttttcctttacctttcttcacattagccttcaaattctccaaagctttgaggattgctttctttactaccttcctag |
26579032 |
T |
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