View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12836_low_14 (Length: 249)
Name: NF12836_low_14
Description: NF12836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12836_low_14 |
 | |
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| [»] chr5 (7 HSPs) |
| |
|
| [»] chr1 (3 HSPs) |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 7 - 249
Target Start/End: Original strand, 1492507 - 1492749
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1492507 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
1492606 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1492607 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagctgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
1492706 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttccaaccatt |
249 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1492707 |
caaaaaatataaataaagcattagttgaggctttccaaccatt |
1492749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 249
Target Start/End: Original strand, 1478338 - 1478580
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||| |||||||| ||||| || ||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
1478338 |
tgttggacaagcactatttggagatggtgctgctgcactcattgttggttctgacccaataccagaaattgagaaacctatatttgagatggtttggact |
1478437 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||||||||| || ||||| || |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
1478438 |
gcacaaacaattgctccagacagtgagggagccattgatggtcaccttcgtgaagctggtctaacatttcaccttcttaaagatgttcctgggattgttt |
1478537 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttccaaccatt |
249 |
Q |
| |
|
|||| || || |||||||||| || ||||||||||||||||| |
|
|
| T |
1478538 |
caaagaacattgataaagcattggtcgaggctttccaaccatt |
1478580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 249
Target Start/End: Original strand, 1482532 - 1482774
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||| |||||||| ||||| || ||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
1482532 |
tgttggacaagcactctttggagatggagctgctgcactcattgttggttctgacccaataccagaaattgagaaacctatatttgagatggtttggact |
1482631 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||||||||| || ||||| || |||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
1482632 |
gcacaaacaattgctccagacagtgagggggccattgacggtcatcttcgtgaagctggtctaacatttcaccttcttaaagatgttcctgggattgttt |
1482731 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttccaaccatt |
249 |
Q |
| |
|
|||| || || |||||||||| | || |||||||||||||| |
|
|
| T |
1482732 |
caaagaacattgataaagcattgatcgatgctttccaaccatt |
1482774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 7 - 249
Target Start/End: Original strand, 1505316 - 1505558
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||| |||||||| || ||||| ||||||||||||| |||||||||||||| ||| ||||||| |
|
|
| T |
1505316 |
tgttggacaagctctatttggagatggagctgctgcactaattgttggttcagatccaataccagaaattgagaaacctatatttgaaatggtttggact |
1505415 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||| || |||||||| ||||| |||||||| ||||| |||||||||| ||| |||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
1505416 |
gcacaaacaatcgcgcctgatagcgaaggagccattgacggtcaccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgaaattgttt |
1505515 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttccaaccatt |
249 |
Q |
| |
|
|||| || || ||||||||||| ||||| |||||||||||||| |
|
|
| T |
1505516 |
caaagaacatcaataaagcattggttgatgctttccaaccatt |
1505558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 7 - 192
Target Start/End: Original strand, 1509463 - 1509648
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||||| |||||||| |||| || |||||||||||||| ||| |||||||||||||| ||||||| |
|
|
| T |
1509463 |
tgttggacaagcattatttggagatggagctgctgcactcattgttggtactgaccctgtaccagaaattgagaaatctatatttgagatggtttggact |
1509562 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgt |
192 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
1509563 |
gcacaaacaattgctccaaatagtgaaggtgccattgacggtcaccttcgtgaagttggactaacatttcgtcttcttaaagatgt |
1509648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 249
Target Start/End: Original strand, 1499579 - 1499821
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
||||||||||||| |||||||||||||||| || ||| | |||||||| ||||| | ||||| |||||||| |||||| |||||||| | ||||||| |
|
|
| T |
1499579 |
tgttggacaagcaatatttggagatggagctgcggcagtcattgttggctctgacctagtacctgaaattgagaaacctttatttgagttagtttggact |
1499678 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||||||| ||||||||||||| || ||| |||||| ||||||||||||||| |||||| | | ||| ||| ||||| ||| |||||| | |
|
|
| T |
1499679 |
gcacaaacaattgcttctgatagtgaaggagctatttgtggtcaacttcgtgaagttgggctaacatataatattcgtaaggatgtctctgagattgtct |
1499778 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttccaaccatt |
249 |
Q |
| |
|
|||| ||||| |||||| | |||||||||| || |||||||| |
|
|
| T |
1499779 |
caaagaatattgataaagtactagttgaggcatttcaaccatt |
1499821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 249
Target Start/End: Original strand, 1487009 - 1487251
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
||||||||||||| ||||||| |||||||| | || | | |||||||| || |||||| || || ||||||| |||||| | |||||| | ||||||| |
|
|
| T |
1487009 |
tgttggacaagcattatttggtgatggagctgttgtagtcattgttggctccgatccgatatcaaaaattgagaaacctctctttgagcttgtttggact |
1487108 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||| |||| |||||||||| || ||| || || |||||||||||||| |||||||| | |||| ||||||||| |||| ||| | | |
|
|
| T |
1487109 |
gcacaaacaatagctctagatagtgaagaagcaattagcggccaacttcgtgaagttggactaacatttaatcttcgtaaagatgtccctgaaattatct |
1487208 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttccaaccatt |
249 |
Q |
| |
|
|||| || || |||||| | ||||| |||| ||||||||||| |
|
|
| T |
1487209 |
caaagaacatcgataaagaactagttaaggcattccaaccatt |
1487251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 7 - 241
Target Start/End: Original strand, 5315450 - 5315684
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||||||| || |||||||||||||||||| ||||||| |
|
|
| T |
5315450 |
tgttggacaagcactatttggagatggagcggctgctcttattgttggctctgacccagtaccagaaatagagaaacctatatttgagatggtttggact |
5315549 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5315550 |
gcacaaacaattgctcctgatagtgaaggagccattgatggtcaccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgttt |
5315649 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttc |
241 |
Q |
| |
|
|||| || || | ||||||||| |||||||||||| |
|
|
| T |
5315650 |
caaagaacattactaaagcattggttgaggctttc |
5315684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 7 - 240
Target Start/End: Original strand, 5302835 - 5303068
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
5302835 |
tgttggacaagcactatttggagatggagctgctgctcttattgttggctctgaccccgtaccagaaattgagaaacctatatttgagatggtttggact |
5302934 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5302935 |
gcacaaacaattgctcctgatagtgaaggagccattgatggtcaccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgttt |
5303034 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggcttt |
240 |
Q |
| |
|
|||| || || | ||||||||| ||||| ||||| |
|
|
| T |
5303035 |
caaagaacattactaaagcattggttgacgcttt |
5303068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 7 - 240
Target Start/End: Original strand, 5284647 - 5284880
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||||||||| | |||||||||||||||| ||||||| |
|
|
| T |
5284647 |
tgttggacaagcactatttggagatggagctgctgctcttattgttggctctgacccaataccagaaattgagagacctatatttgagatggtttggact |
5284746 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5284747 |
gcacaaacaattgctcctgatagtgaaggagccattgatggtcaccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgttt |
5284846 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggcttt |
240 |
Q |
| |
|
|||| || || | ||||||||| ||||||||||| |
|
|
| T |
5284847 |
caaagaacattactaaagcattggttgaggcttt |
5284880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 241
Target Start/End: Original strand, 5310736 - 5310970
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
|||||| |||||| | |||||||||||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
5310736 |
tgttgggcaagcattgtttggagatggagctgctgctcttattgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggact |
5310835 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5310836 |
gcacaaacaattgctcctgatagtgaaggagccattgatggtcaccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgtct |
5310935 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttc |
241 |
Q |
| |
|
|||| || || | ||||||||| |||||||||||| |
|
|
| T |
5310936 |
caaagaacattactaaagcattggttgaggctttc |
5310970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 241
Target Start/End: Complemental strand, 5289480 - 5289246
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
|||||| |||||||| |||||||||||||| ||||| ||||||||||| ||||| || |||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
5289480 |
tgttgggcaagcactgtttggagatggagctgctgctcttattgttggttctgacccagtaccagaaattgagaaacctatatttgagatggtttggact |
5289381 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||| || |||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5289380 |
gcacaaacaattgctccggatagtgaaggagccattgatggccaccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgttt |
5289281 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttc |
241 |
Q |
| |
|
|||| || || | ||||||||| |||||||||||| |
|
|
| T |
5289280 |
caaagaacatcactaaagcattggttgaggctttc |
5289246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 249
Target Start/End: Complemental strand, 46706771 - 46706529
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
|||||| |||||||| ||||||| |||| ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
46706771 |
tgttgggcaagcactgtttggagtcagagctgctgcacttattgttggttctgatccagtaccagaaattgagaaacctatatttgagatggtttggact |
46706672 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||| ||||||| |||||||| |||||||||||||||||||| | |
|
|
| T |
46706671 |
tcacaaacaattgctccagatagtgaaggagccattgatggtcaccttcgtgaagctggactaacattccaccttctaaaagatgttcctgggattgttt |
46706572 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttccaaccatt |
249 |
Q |
| |
|
|||| || || ||||||||||||||||||||||||||||||| |
|
|
| T |
46706571 |
caaagaacattgataaagcattagttgaggctttccaaccatt |
46706529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 32530658 - 32530582
Alignment:
| Q |
140 |
attgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgtcaaaaaatat |
216 |
Q |
| |
|
||||| || ||||| |||||||||||| | || ||||| ||||| |||||||||||||| ||| | ||||| ||||| |
|
|
| T |
32530658 |
attgacggacatctccgtgaagttgggctcacttttcatcttctcaaagatgttcctggaattatctcaaagaatat |
32530582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 155; Significance: 2e-82; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 7 - 249
Target Start/End: Original strand, 44141540 - 44141782
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||| || ||||| |||||||||||||| ||||| |||||||||||| ||||||| |
|
|
| T |
44141540 |
tgttggacaagcactatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggact |
44141639 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
44141640 |
gcacaaacaattgctccagatagtgaaggggccattgacggtcaccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgttt |
44141739 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttccaaccatt |
249 |
Q |
| |
|
|||| || || ||||||||||| |||||||||||| ||||||| |
|
|
| T |
44141740 |
caaagaacatcaataaagcattggttgaggctttcgaaccatt |
44141782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 7 - 249
Target Start/End: Original strand, 44133118 - 44133360
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
||||||||| || ||||||||||||||||| |||||||| |||||||| || ||||| |||||||||||||| ||||| |||||||||||| ||||||| |
|
|
| T |
44133118 |
tgttggacaggccctatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggact |
44133217 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
44133218 |
gcacaaacaattgctccagatagtgaaggagccattgatggtcaccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgttt |
44133317 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttccaaccatt |
249 |
Q |
| |
|
|||| || || ||||||||||| |||||||||||| ||||||| |
|
|
| T |
44133318 |
caaagaacatcaataaagcattggttgaggctttcgaaccatt |
44133360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 249
Target Start/End: Original strand, 44128913 - 44129155
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
||||||||| || ||||||||||||||||| |||||||| |||||||| || ||||| |||||||||||||| ||||| |||||||||||| ||||||| |
|
|
| T |
44128913 |
tgttggacaggccctatttggagatggagctgctgcactaattgttggttcagatccagtaccagaaattgagaaaccaatatttgagatggtttggact |
44129012 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
44129013 |
gcacaaacaattgctccagatagtgaaggagccattgatggtcaccttcgtgaagctggactaacatttcaccttcttaaagatgttcctgggattgttt |
44129112 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttccaaccatt |
249 |
Q |
| |
|
|||| || || |||||||| || |||||||||||| ||||||| |
|
|
| T |
44129113 |
caaagaacatcaataaagctttggttgaggctttcgaaccatt |
44129155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 249
Target Start/End: Complemental strand, 24163573 - 24163331
Alignment:
| Q |
7 |
tgttggacaagcactatttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggaca |
106 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||| | |||||||| ||||| || ||| |||||||| |||||| |||||||| | |||||||| |
|
|
| T |
24163573 |
tgttggacaagctctatttggagatggagctgctgcagtcattgttggctctgacccaatacaggaaattgagaaacctctatttgagttagtttggaca |
24163474 |
T |
|
| Q |
107 |
gcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgttcctgggattgtgt |
206 |
Q |
| |
|
||||||||||| ||||| |||||||||| || ||| ||| || ||||||||| ||||| || ||||||| ||| ||| |||||||| | ||||| | |
|
|
| T |
24163473 |
gcacaaacaatcgctccaaatagtgaaggagctatttgtggccaacttcgtgaatttgggctatcatttcatctttgtaaggatgttccagacattgtct |
24163374 |
T |
|
| Q |
207 |
caaaaaatataaataaagcattagttgaggctttccaaccatt |
249 |
Q |
| |
|
|||| ||||| |||||||||| ||||||| ||||||||||| |
|
|
| T |
24163373 |
caaagaatattgataaagcattgtttgaggcattccaaccatt |
24163331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 37863157 - 37863019
Alignment:
| Q |
23 |
tttggagatggagcagctgcacttattgttgggtctgatccggtaccagaaattgaaaaacctatatttgagatgatttggacagcacaaacaattgctc |
122 |
Q |
| |
|
||||||||||| ||||| || | |||||||| || |||||| | |||||| |||| || ||| | ||||| || ||||||| ||||||||||| | || |
|
|
| T |
37863157 |
tttggagatggtgcagcagctgtgattgttggttcagatccgttgccagaagttgagaagcctttgtttgaattggtttggactgcacaaacaatcgttc |
37863058 |
T |
|
| Q |
123 |
ctgatagtgaaggtgccattgatggtcatcttcgtgaag |
161 |
Q |
| |
|
| ||||||||||| || ||||||||||| ||||| |||| |
|
|
| T |
37863057 |
cagatagtgaaggagctattgatggtcaccttcgagaag |
37863019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 35251251 - 35251342
Alignment:
| Q |
101 |
tggacagcacaaacaattgctcctgatagtgaaggtgccattgatggtcatcttcgtgaagttgggttaacatttcaccttcttaaagatgt |
192 |
Q |
| |
|
||||| ||||||||||| |||||||||| |||| || ||||||||||| |||||||| ||||| ||||||| || ||||| || ||||| |
|
|
| T |
35251251 |
tggactgcacaaacaatccttcctgatagtcaaggagctattgatggtcaccttcgtgaggttggactaacattccatcttctcaaggatgt |
35251342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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