View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12838_low_12 (Length: 270)

Name: NF12838_low_12
Description: NF12838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12838_low_12
NF12838_low_12
[»] chr8 (9 HSPs)
chr8 (9-267)||(24691769-24692029)
chr8 (223-270)||(31654690-31654737)
chr8 (216-270)||(6552732-6552786)
chr8 (216-270)||(33289260-33289314)
chr8 (217-270)||(54612-54665)
chr8 (217-270)||(2890162-2890215)
chr8 (217-270)||(7785778-7785831)
chr8 (217-270)||(15888352-15888405)
chr8 (217-270)||(39571203-39571256)
[»] chr5 (9 HSPs)
chr5 (207-270)||(11795245-11795308)
chr5 (217-270)||(6126901-6126954)
chr5 (217-270)||(9395427-9395480)
chr5 (217-270)||(13103101-13103154)
chr5 (217-270)||(17025701-17025754)
chr5 (217-270)||(36563538-36563591)
chr5 (217-270)||(37148955-37149008)
chr5 (217-270)||(41989407-41989460)
chr5 (238-270)||(583066-583098)
[»] chr2 (12 HSPs)
chr2 (217-270)||(41492896-41492949)
chr2 (217-270)||(3055635-3055688)
chr2 (217-270)||(6648519-6648572)
chr2 (217-270)||(9047755-9047808)
chr2 (217-270)||(12337937-12337990)
chr2 (217-270)||(13197710-13197763)
chr2 (217-270)||(15372303-15372356)
chr2 (217-270)||(15896919-15896972)
chr2 (217-270)||(37990013-37990066)
chr2 (217-270)||(38917522-38917575)
chr2 (217-270)||(41478639-41478692)
chr2 (217-270)||(44398763-44398816)
[»] chr1 (12 HSPs)
chr1 (217-270)||(11897131-11897184)
chr1 (207-270)||(44668084-44668146)
chr1 (216-270)||(27159357-27159411)
chr1 (217-270)||(11796010-11796063)
chr1 (217-270)||(12483628-12483681)
chr1 (217-270)||(14984914-14984967)
chr1 (217-270)||(16448185-16448238)
chr1 (217-270)||(17556830-17556883)
chr1 (217-270)||(25694396-25694449)
chr1 (217-270)||(31842795-31842848)
chr1 (217-270)||(39401966-39402019)
chr1 (217-270)||(47777481-47777534)
[»] chr7 (8 HSPs)
chr7 (206-270)||(38441537-38441601)
chr7 (217-270)||(1738447-1738500)
chr7 (217-270)||(7240826-7240879)
chr7 (217-270)||(7482302-7482355)
chr7 (217-270)||(9268833-9268886)
chr7 (217-270)||(22285776-22285829)
chr7 (217-270)||(46840937-46840990)
chr7 (222-270)||(33418453-33418501)
[»] chr6 (11 HSPs)
chr6 (215-270)||(8186444-8186499)
chr6 (217-270)||(2830412-2830465)
chr6 (217-270)||(6330192-6330245)
chr6 (217-270)||(8099607-8099660)
chr6 (217-270)||(8382969-8383022)
chr6 (217-270)||(9644773-9644826)
chr6 (217-270)||(9650790-9650843)
chr6 (217-270)||(11572145-11572198)
chr6 (217-270)||(13853593-13853646)
chr6 (217-270)||(26602400-26602453)
chr6 (217-270)||(28747134-28747187)
[»] chr4 (7 HSPs)
chr4 (216-270)||(6121892-6121946)
chr4 (216-270)||(47833688-47833742)
chr4 (228-270)||(52756752-52756794)
chr4 (217-270)||(3422137-3422190)
chr4 (217-270)||(5986953-5987006)
chr4 (217-270)||(17236865-17236918)
chr4 (217-270)||(51894582-51894635)
[»] scaffold0009 (1 HSPs)
scaffold0009 (217-270)||(49582-49635)
[»] chr3 (7 HSPs)
chr3 (217-270)||(10298056-10298109)
chr3 (217-270)||(19557052-19557105)
chr3 (217-270)||(34080030-34080083)
chr3 (217-270)||(40690996-40691049)
chr3 (217-270)||(48340474-48340527)
chr3 (217-270)||(49823381-49823434)
chr3 (158-202)||(1860185-1860229)


Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 9 - 267
Target Start/End: Original strand, 24691769 - 24692029
Alignment:
Q  9 aaaacaatctcacatcacatagcacaaatttataacatcttttg---acccaaaatagttgaagtcttgaacatttcttgtgttatttgaaaatcaaaat 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24691769 aaaacaatctcacatcacatagcacaaatttataacatctcttgttgacccaaaatagttgaagtcttgaacatctcttgtgttatttgaaaatcaaaat 24691868  T
Q  106 atagacatctcaaagtgacactttgtttatgtttctatctatctctcttctattttttatcttctacaacaaacacacatttggaaaatacacgtaaatt 205  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  24691869 atagacatctcaa-gtgacactttgtttatgtttctatctatctctcttctactttttatcttctacaacaaacacacatttggaaaatacacataaatt 24691967  T
Q  206 aacaaatatggtactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgat 267  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||    
T  24691968 aacaaatatggtactcgttccggtcctatttttaaaagaaatttgggtcaacaaaagttgat 24692029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 31654737 - 31654690
Alignment:
Q  223 ctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    |||| ||||| ||| |||||||| ||||||||||||||||||||||||    
T  31654737 ctccggtcctatttataaaagaattttgggtcaacaaaagttgatgta 31654690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 6552786 - 6552732
Alignment:
Q  216 gtactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    |||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  6552786 gtactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 6552732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 33289260 - 33289314
Alignment:
Q  216 gtactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    |||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  33289260 gtactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 33289314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 54612 - 54665
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  54612 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 54665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 2890162 - 2890215
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  2890162 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 2890215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 7785778 - 7785831
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  7785778 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 7785831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 15888352 - 15888405
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| ||||||| || ||| ||| |||| ||||||||||||||||||||||||    
T  15888352 tactccctccagttctatttataagagaattttgggtcaacaaaagttgatgta 15888405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 39571203 - 39571256
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  39571203 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 39571256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 11795308 - 11795245
Alignment:
Q  207 acaaatatggtactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||||||  ||||| |||||||||| ||| ||| |||| ||||||||||||||||||||||||    
T  11795308 acaaatattatactccctccagtcctatttataagagaattttgggtcaacaaaagttgatgta 11795245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 6126954 - 6126901
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  6126954 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 6126901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 9395480 - 9395427
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  9395480 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 9395427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 13103154 - 13103101
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  13103154 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 13103101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 17025754 - 17025701
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  17025754 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 17025701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 36563538 - 36563591
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  36563538 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 36563591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 37148955 - 37149008
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  37148955 tactccctccggtcctatttataatagaattttgggtcaacaaaagttgatgta 37149008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 41989407 - 41989460
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  41989407 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 41989460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 583098 - 583066
Alignment:
Q  238 taaaagaaatttgggtcaacaaaagttgatgta 270  Q
    |||||||| ||||||||||||||||||||||||    
T  583098 taaaagaattttgggtcaacaaaagttgatgta 583066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 41492896 - 41492949
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||||||||||||||||||||||||||||    
T  41492896 tactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgta 41492949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 3055688 - 3055635
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  3055688 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 3055635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 6648519 - 6648572
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  6648519 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 6648572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 9047755 - 9047808
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  9047755 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 9047808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 12337937 - 12337990
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  12337937 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 12337990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 13197710 - 13197763
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  13197710 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 13197763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 15372356 - 15372303
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  15372356 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 15372303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 15896972 - 15896919
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  15896972 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 15896919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 37990013 - 37990066
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  37990013 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 37990066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 38917522 - 38917575
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  38917522 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 38917575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 41478639 - 41478692
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  41478639 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 41478692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 44398816 - 44398763
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  44398816 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 44398763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 11897184 - 11897131
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||||||||||||||||||||||||||||    
T  11897184 tactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgta 11897131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 44668084 - 44668146
Alignment:
Q  207 acaaatatggtactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||||||| ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  44668084 acaaatatg-tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 44668146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 27159357 - 27159411
Alignment:
Q  216 gtactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    |||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  27159357 gtactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 27159411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 11796063 - 11796010
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  11796063 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 11796010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 12483628 - 12483681
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  12483628 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 12483681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 14984967 - 14984914
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  14984967 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 14984914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 16448238 - 16448185
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| ||||| |||||||||||||||||||||||    
T  16448238 tactccctccggtcctatttataagagaaagttgggtcaacaaaagttgatgta 16448185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 17556883 - 17556830
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| ||||| |||||||||||||||||||||||    
T  17556883 tactccctccggtcctatttataagagaaacttgggtcaacaaaagttgatgta 17556830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 25694449 - 25694396
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  25694449 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 25694396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 31842795 - 31842848
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  31842795 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 31842848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 39401966 - 39402019
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  39401966 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 39402019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 47777481 - 47777534
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  47777481 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 47777534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 38441601 - 38441537
Alignment:
Q  206 aacaaatatggtactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||||||| |||||  |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  38441601 aacaaatatagtacttcctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 38441537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 1738447 - 1738500
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  1738447 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 1738500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 7240879 - 7240826
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  7240879 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 7240826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 7482355 - 7482302
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  7482355 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 7482302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 9268886 - 9268833
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  9268886 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 9268833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 22285829 - 22285776
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  22285829 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 22285776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 46840990 - 46840937
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  46840990 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 46840937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 33418501 - 33418453
Alignment:
Q  222 gctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  33418501 gctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 33418453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 8186499 - 8186444
Alignment:
Q  215 ggtactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||||| | || ||||| ||| |||||||||||||| ||||||||||||||||||    
T  8186499 ggtactccccccggtcctatttataaaagaaatttggatcaacaaaagttgatgta 8186444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 2830465 - 2830412
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  2830465 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 2830412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 6330245 - 6330192
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  6330245 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 6330192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 8099660 - 8099607
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  8099660 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 8099607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 8382969 - 8383022
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  8382969 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 8383022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 9644826 - 9644773
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  9644826 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 9644773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 9650843 - 9650790
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  9650843 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 9650790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 11572145 - 11572198
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  11572145 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 11572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 13853593 - 13853646
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  13853593 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 13853646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 26602453 - 26602400
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  26602453 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 26602400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 28747134 - 28747187
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| || ||||||| ||| ||| |||| ||||||||||||||||||||||||    
T  28747134 tactcccttcagtcctatttataagagaattttgggtcaacaaaagttgatgta 28747187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 31; Significance: 0.00000002; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 6121892 - 6121946
Alignment:
Q  216 gtactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    |||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  6121892 gtactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 6121946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 47833742 - 47833688
Alignment:
Q  216 gtactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    |||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  47833742 gtactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 47833688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 52756794 - 52756752
Alignment:
Q  228 gtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| ||| |||||||| ||||||||||||||||||||||||    
T  52756794 gtcctatttataaaagaattttgggtcaacaaaagttgatgta 52756752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 3422190 - 3422137
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  3422190 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 3422137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 5987006 - 5986953
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  5987006 tactctctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 5986953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 17236918 - 17236865
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| | |||||||||||||||||||||||||||    
T  17236918 tactctctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgta 17236865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 51894582 - 51894635
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  51894582 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 51894635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 49635 - 49582
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  49635 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 49582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.00000009; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 10298109 - 10298056
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  10298109 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 10298056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 19557052 - 19557105
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  19557052 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 19557105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 34080030 - 34080083
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  34080030 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 34080083  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 40690996 - 40691049
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  40690996 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 40691049  T

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Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 48340527 - 48340474
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  48340527 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 48340474  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 49823381 - 49823434
Alignment:
Q  217 tactcgctccagtcctctttttaaaagaaatttgggtcaacaaaagttgatgta 270  Q
    ||||| |||| ||||| ||| ||| |||| ||||||||||||||||||||||||    
T  49823381 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 49823434  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 1860185 - 1860229
Alignment:
Q  158 ttttttatcttctacaacaaacacacatttggaaaatacacgtaa 202  Q
    |||||||||||||||||| |||||||||||  ||||||| |||||    
T  1860185 ttttttatcttctacaactaacacacatttcaaaaatactcgtaa 1860229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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