View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12838_low_14 (Length: 267)
Name: NF12838_low_14
Description: NF12838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12838_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 51 - 160
Target Start/End: Original strand, 7034991 - 7035100
Alignment:
| Q |
51 |
tagcaacataactgtaatattgactggactaagtcggtactcattagtcaagtcatcaacagggcttaatctgatatctagcttgttgaatgcagctata |
150 |
Q |
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| T |
7034991 |
tagcaacataactgtaatattgactggactaagtcggtactcattagtcaagtcatcaacagggcttaatctgatatctagcttgttgaatgcagctata |
7035090 |
T |
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| Q |
151 |
atttaaagtc |
160 |
Q |
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|||||||||| |
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| T |
7035091 |
atttaaagtc |
7035100 |
T |
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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 7035151 - 7035196
Alignment:
| Q |
218 |
atgcagatatccagtagtagcataagtttatttgttcatctcactc |
263 |
Q |
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|||||||||||| ||||||||||||||||||||||| ||||||||| |
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| T |
7035151 |
atgcagatatcctgtagtagcataagtttatttgtttatctcactc |
7035196 |
T |
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