View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1283_low_31 (Length: 282)

Name: NF1283_low_31
Description: NF1283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1283_low_31
NF1283_low_31
[»] chr6 (20 HSPs)
chr6 (61-234)||(14831226-14831402)
chr6 (52-228)||(33321774-33321953)
chr6 (61-234)||(1073593-1073769)
chr6 (61-234)||(15275399-15275575)
chr6 (61-234)||(18599316-18599492)
chr6 (61-234)||(14888267-14888443)
chr6 (52-214)||(28228832-28228997)
chr6 (61-234)||(2520904-2521080)
chr6 (61-232)||(34855698-34855872)
chr6 (52-226)||(34320841-34321018)
chr6 (61-214)||(17939283-17939439)
chr6 (63-226)||(13457176-13457342)
chr6 (61-214)||(4424247-4424403)
chr6 (61-234)||(22374171-22374347)
chr6 (61-234)||(11935010-11935186)
chr6 (61-226)||(1931782-1931943)
chr6 (61-157)||(18311628-18311723)
chr6 (61-157)||(35040929-35041025)
chr6 (61-108)||(25539943-25539990)
chr6 (157-194)||(7219292-7219330)
[»] scaffold0045 (1 HSPs)
scaffold0045 (52-234)||(13244-13429)
[»] chr7 (31 HSPs)
chr7 (52-234)||(27735366-27735551)
chr7 (52-234)||(9149122-9149307)
chr7 (61-234)||(3795271-3795447)
chr7 (52-233)||(23300037-23300221)
chr7 (52-234)||(33638992-33639177)
chr7 (61-234)||(14308691-14308867)
chr7 (61-226)||(47174245-47174412)
chr7 (61-226)||(9226547-9226715)
chr7 (61-226)||(42245182-42245350)
chr7 (52-226)||(38434867-38435044)
chr7 (61-234)||(23766765-23766941)
chr7 (61-234)||(33030557-33030733)
chr7 (77-226)||(42996222-42996374)
chr7 (61-234)||(17477650-17477826)
chr7 (61-234)||(17575388-17575564)
chr7 (61-213)||(42827701-42827856)
chr7 (61-211)||(47163879-47164031)
chr7 (63-226)||(47573781-47573947)
chr7 (61-234)||(17482097-17482273)
chr7 (61-234)||(17570941-17571117)
chr7 (61-234)||(8926217-8926393)
chr7 (61-234)||(42687313-42687489)
chr7 (63-226)||(6911803-6911969)
chr7 (87-234)||(19520927-19521077)
chr7 (61-214)||(5962478-5962633)
chr7 (64-132)||(4481716-4481784)
chr7 (61-136)||(11499720-11499795)
chr7 (157-226)||(42917619-42917689)
chr7 (61-157)||(17469587-17469684)
chr7 (61-157)||(17583530-17583627)
chr7 (52-96)||(42917696-42917740)
[»] chr3 (33 HSPs)
chr3 (52-234)||(40827348-40827533)
chr3 (61-234)||(48521344-48521520)
chr3 (52-228)||(55295092-55295271)
chr3 (61-234)||(22477464-22477640)
chr3 (61-234)||(11598286-11598462)
chr3 (67-228)||(19893699-19893863)
chr3 (61-234)||(11951297-11951473)
chr3 (52-213)||(36165324-36165488)
chr3 (63-234)||(35088162-35088336)
chr3 (61-234)||(6104448-6104624)
chr3 (61-226)||(8242464-8242632)
chr3 (52-214)||(32755262-32755427)
chr3 (61-234)||(31369339-31369515)
chr3 (61-232)||(23193220-23193394)
chr3 (63-214)||(52840857-52841011)
chr3 (61-226)||(54512543-54512711)
chr3 (69-226)||(54793295-54793455)
chr3 (61-232)||(49112833-49113007)
chr3 (61-232)||(50771569-50771743)
chr3 (52-226)||(2845170-2845347)
chr3 (69-226)||(16495655-16495814)
chr3 (63-226)||(5252698-5252864)
chr3 (61-232)||(50741111-50741285)
chr3 (61-234)||(51248117-51248293)
chr3 (63-226)||(39796797-39796963)
chr3 (52-191)||(52463245-52463387)
chr3 (63-234)||(52853766-52853940)
chr3 (61-231)||(48976444-48976616)
chr3 (115-224)||(35436662-35436774)
chr3 (61-214)||(11325966-11326122)
chr3 (63-194)||(21699897-21700029)
chr3 (161-228)||(11382931-11382999)
chr3 (64-97)||(11383015-11383048)
[»] chr2 (29 HSPs)
chr2 (52-234)||(1515305-1515490)
chr2 (61-234)||(9917013-9917189)
chr2 (52-226)||(16883724-16883901)
chr2 (52-226)||(17041414-17041591)
chr2 (52-226)||(17025392-17025569)
chr2 (52-226)||(17037069-17037246)
chr2 (52-226)||(10821519-10821696)
chr2 (52-226)||(17091577-17091754)
chr2 (61-234)||(21097491-21097667)
chr2 (61-234)||(26821412-26821588)
chr2 (52-228)||(18093037-18093207)
chr2 (61-234)||(30567189-30567365)
chr2 (61-234)||(30570874-30571050)
chr2 (52-226)||(4811347-4811525)
chr2 (52-226)||(14752982-14753159)
chr2 (66-226)||(14323656-14323819)
chr2 (63-226)||(1993381-1993547)
chr2 (63-226)||(6343169-6343335)
chr2 (63-226)||(28501951-28502117)
chr2 (61-232)||(36633410-36633584)
chr2 (52-214)||(45398554-45398719)
chr2 (61-234)||(16724673-16724849)
chr2 (61-234)||(19167967-19168143)
chr2 (61-214)||(42885203-42885359)
chr2 (61-234)||(45205342-45205518)
chr2 (52-214)||(28380318-28380483)
chr2 (61-234)||(33664119-33664295)
chr2 (53-147)||(35286656-35286750)
chr2 (157-233)||(11448159-11448236)
[»] chr5 (28 HSPs)
chr5 (61-234)||(12588600-12588776)
chr5 (61-234)||(10513421-10513597)
chr5 (52-226)||(9701983-9702160)
chr5 (61-234)||(21029831-21030007)
chr5 (61-234)||(7285400-7285576)
chr5 (61-234)||(20996264-20996440)
chr5 (61-234)||(3397458-3397634)
chr5 (61-234)||(20349646-20349822)
chr5 (63-234)||(1852252-1852426)
chr5 (63-226)||(31295996-31296162)
chr5 (61-214)||(3150924-3151080)
chr5 (61-234)||(4881996-4882172)
chr5 (61-234)||(33611460-33611636)
chr5 (63-234)||(30689032-30689206)
chr5 (61-234)||(2194888-2195064)
chr5 (61-214)||(19447746-19447902)
chr5 (61-226)||(3210520-3210686)
chr5 (63-232)||(3028476-3028647)
chr5 (61-234)||(26321395-26321571)
chr5 (52-226)||(19395087-19395264)
chr5 (53-147)||(33929607-33929701)
chr5 (61-214)||(41780571-41780727)
chr5 (115-226)||(290339-290453)
chr5 (108-211)||(287341-287447)
chr5 (61-157)||(17996383-17996479)
chr5 (61-157)||(20757764-20757860)
chr5 (61-157)||(38934280-38934376)
chr5 (61-234)||(27065623-27065797)
[»] chr4 (33 HSPs)
chr4 (61-234)||(35707965-35708141)
chr4 (52-234)||(40621924-40622108)
chr4 (61-234)||(574484-574659)
chr4 (61-222)||(8530618-8530782)
chr4 (52-234)||(17739816-17740000)
chr4 (61-234)||(47720406-47720582)
chr4 (61-234)||(23478686-23478862)
chr4 (52-225)||(3839699-3839875)
chr4 (61-234)||(34056900-34057076)
chr4 (61-226)||(1944275-1944444)
chr4 (61-234)||(54331980-54332156)
chr4 (77-226)||(26870637-26870789)
chr4 (61-234)||(37701936-37702112)
chr4 (61-234)||(38007620-38007796)
chr4 (61-234)||(55999034-55999210)
chr4 (63-234)||(14829850-14830024)
chr4 (61-214)||(36856884-36857040)
chr4 (63-226)||(15520500-15520666)
chr4 (66-226)||(740752-740915)
chr4 (61-214)||(33503335-33503491)
chr4 (61-214)||(35495880-35496036)
chr4 (61-234)||(39743083-39743259)
chr4 (61-231)||(19831734-19831907)
chr4 (61-234)||(28135403-28135579)
chr4 (61-234)||(13627828-13628004)
chr4 (61-234)||(7644129-7644297)
chr4 (61-234)||(53342186-53342360)
chr4 (61-214)||(17698972-17699128)
chr4 (52-191)||(41984561-41984703)
chr4 (63-157)||(22116379-22116473)
chr4 (61-157)||(2776148-2776244)
chr4 (61-144)||(5272612-5272695)
chr4 (61-157)||(21352954-21353051)
[»] chr1 (29 HSPs)
chr1 (61-234)||(10763147-10763323)
chr1 (67-228)||(52309605-52309769)
chr1 (61-234)||(29840996-29841172)
chr1 (52-234)||(51966033-51966218)
chr1 (61-234)||(42682155-42682327)
chr1 (52-234)||(50560807-50560992)
chr1 (61-234)||(31619454-31619630)
chr1 (61-234)||(18813984-18814160)
chr1 (61-234)||(34687352-34687528)
chr1 (52-214)||(45004518-45004683)
chr1 (61-214)||(16031914-16032070)
chr1 (52-226)||(15315023-15315200)
chr1 (52-214)||(17671092-17671256)
chr1 (52-226)||(28566019-28566196)
chr1 (52-214)||(36681029-36681194)
chr1 (61-234)||(41830358-41830534)
chr1 (63-226)||(18111359-18111525)
chr1 (63-226)||(43254996-43255162)
chr1 (63-226)||(50395410-50395576)
chr1 (52-226)||(12714250-12714427)
chr1 (61-234)||(34691880-34692056)
chr1 (61-234)||(48340094-48340270)
chr1 (69-226)||(13662723-13662882)
chr1 (61-234)||(52521877-52522053)
chr1 (61-232)||(41963239-41963413)
chr1 (53-147)||(12246142-12246236)
chr1 (61-214)||(38845533-38845689)
chr1 (61-157)||(44406220-44406316)
chr1 (63-136)||(24294395-24294468)
[»] chr8 (30 HSPs)
chr8 (52-234)||(41156140-41156325)
chr8 (52-226)||(45293878-45294055)
chr8 (52-233)||(12759978-12760161)
chr8 (52-234)||(41976960-41977145)
chr8 (52-226)||(41907367-41907544)
chr8 (52-226)||(19247621-19247798)
chr8 (52-226)||(19320805-19320982)
chr8 (61-234)||(14079140-14079316)
chr8 (77-226)||(12250520-12250672)
chr8 (61-234)||(30825952-30826128)
chr8 (61-226)||(39204140-39204308)
chr8 (77-226)||(39444535-39444687)
chr8 (52-226)||(23626645-23626822)
chr8 (52-226)||(29433548-29433725)
chr8 (63-226)||(6300929-6301095)
chr8 (63-226)||(23966832-23966998)
chr8 (63-226)||(37029347-37029513)
chr8 (63-226)||(44939951-44940117)
chr8 (61-234)||(33424568-33424744)
chr8 (65-214)||(22333435-22333587)
chr8 (61-237)||(41628389-41628568)
chr8 (63-226)||(42061106-42061272)
chr8 (61-234)||(42811246-42811421)
chr8 (61-237)||(38961673-38961852)
chr8 (61-237)||(38992017-38992196)
chr8 (61-199)||(19395873-19396014)
chr8 (61-157)||(23522952-23523048)
chr8 (87-234)||(6477828-6477978)
chr8 (119-234)||(44383308-44383426)
chr8 (53-117)||(22947104-22947168)
[»] scaffold0051 (1 HSPs)
scaffold0051 (61-226)||(49814-49982)
[»] scaffold0171 (1 HSPs)
scaffold0171 (61-226)||(30319-30487)
[»] scaffold0010 (1 HSPs)
scaffold0010 (66-226)||(119805-119968)
[»] scaffold0006 (2 HSPs)
scaffold0006 (61-226)||(64956-65125)
scaffold0006 (69-226)||(152485-152644)
[»] scaffold0122 (1 HSPs)
scaffold0122 (61-234)||(175-351)
[»] scaffold0038 (1 HSPs)
scaffold0038 (52-214)||(29330-29495)
[»] scaffold0047 (1 HSPs)
scaffold0047 (63-234)||(26684-26858)
[»] scaffold0005 (1 HSPs)
scaffold0005 (63-234)||(9685-9859)
[»] scaffold0095 (1 HSPs)
scaffold0095 (77-226)||(1104-1256)
[»] scaffold0385 (1 HSPs)
scaffold0385 (61-146)||(4501-4586)
[»] scaffold0079 (1 HSPs)
scaffold0079 (52-121)||(10923-10992)
[»] scaffold0088 (1 HSPs)
scaffold0088 (77-124)||(53301-53348)
[»] scaffold0016 (1 HSPs)
scaffold0016 (52-98)||(100496-100542)


Alignment Details
Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 14831402 - 14831226
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttga--aa 158  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||    
T  14831402 agatctactttggaacaactcgaacatgcaagttcttcagtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctttgaagaa 14831303  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  14831302 attgaaccactgtccacccaagtatttttcatagctttctctttcggcggtaatgaggtgacacttatattttctct 14831226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 33321774 - 33321953
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  33321774 cagcaacaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttctcgagatcaaagatgaacttaccaccttcttccatcacacgttc 33321873  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatatt 228  Q
    ||||   |||||||||||||| |||||||||||||||||||||||||||| |||| || ||||||| |||||||||||||    
T  33321874 tttgcagaaattgaaccactgcccacccaagtatttttcatagctttctcattcgacgataatgaggcgacacttatatt 33321953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 1073593 - 1073769
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  1073593 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 1073692  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||| |||||||    
T  1073693 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctct 1073769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 15275575 - 15275399
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||| ||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||| |||||| ||   ||    
T  15275575 agatctactttcgaacaactcaaatatgcaagttcttcagtgacttttcgagatcaaagatgagcttaccactttcttccatcactcgttctctgcagaa 15275476  T
Q  159 attgaaccactgc-cacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||  |||| ||||| |||||||    
T  15275475 attgaaccactgctcacccaagtatttttcatagcttgctctatcggcggtaatgaggtgacaattataatgtctct 15275399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 18599316 - 18599492
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  18599316 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 18599415  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||| |||||||    
T  18599416 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctct 18599492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 14888267 - 14888443
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||   |||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  14888267 agatctactttggaacaactcgaatttgcaagttcttctatgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 14888366  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||| |||||||    
T  14888367 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctct 14888443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 52 - 214
Target Start/End: Original strand, 28228832 - 28228997
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||| |  ||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  28228832 cagcaacaaagatctactttggaacaactcgaacgtataagttcttcggtgacttttcgagatcaaagatgagcttatcaccttcttccatcacacgttc 28228931  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    | ||   ||||||||| | || |||||||||||||||||||||||||||||||||| |||||||||    
T  28228932 tctgcagaaattgaactattgtccacccaagtatttttcatagctttctctttcggtggtaatgag 28228997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 2521080 - 2520904
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgt--tctttgaaa 158  Q
    ||||||| ||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||  ||| |  ||    
T  2521080 agatctattttggaacaactcgaatttgcaagttcttatgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgtagaa 2520981  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| |||| |||||||||| |||| ||||| |||||||    
T  2520980 attgaaccactgcccacccaagtaattttcatagcttgctctatcggtggtaatgagatgacagttatactgtctct 2520904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 232
Target Start/End: Complemental strand, 34855872 - 34855698
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||| ||| ||||||||||||||||| |||||||| |||| | ||   ||    
T  34855872 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagataaaaaatgagcttaccaccttcttccatcactcgttatctgcagaa 34855773  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtct 232  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||| |||||    
T  34855772 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtct 34855698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 34321018 - 34320841
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||| ||||||| |||||||||| |||    
T  34321018 cagcaacaaagatctactatggaacaactcgaacatgcaagttctttggtgatttttcgagatcaaagatgagattatcaccttcttccatcacacattc 34320919  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||| || || ||  |||||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  34320918 tatgcagaaattgaatcattgcccttccaagtatttttcacagcatgctctttcggcggtaatgagacgacacttata 34320841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 61 - 214
Target Start/End: Complemental strand, 17939439 - 17939283
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||| ||  ||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||   ||    
T  17939439 agatctactttggaacaactcgaatttgcaagttattctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttctctgcagaa 17939340  T
Q  159 attgaaccactgc-cacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    ||||||||||||| |||||||||| |||||||||||| |||| | ||||||||||||    
T  17939339 attgaaccactgctcacccaagtaattttcatagcttgctctattggcggtaatgag 17939283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 13457176 - 13457342
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  13457176 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 13457275  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  13457276 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 13457342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 214
Target Start/End: Complemental strand, 4424403 - 4424247
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||| || |||||| ||||||||||||||||||||||||||| || ||||| |||| | ||   ||    
T  4424403 agatctactttggaacaactcgaatttgcaagttcttttgtaacttttggagatcaaagatgagcttaccaccttcttctatcactcgttatatgcagaa 4424304  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||    
T  4424303 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgag 4424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 22374171 - 22374347
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||| ||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  22374171 agatctactttggaacaactcaaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgctgaa 22374270  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    | |||||||||| || | ||||||||||||||||||| |||| ||||||||||||||  |||| ||||| |||||||    
T  22374271 aatgaaccactgcccgcgcaagtatttttcatagcttgctctatcggcggtaatgaggtgacagttatactgtctct 22374347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 11935010 - 11935186
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||| |||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  11935010 agatttactttggaacaactcgaatttgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 11935109  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    || |||||| || ||||||||||| |||| ||||||| |||| |||| |||||||||| |||| ||| | |||||||    
T  11935110 atagaaccaatgaccacccaagtaattttaatagcttgctctatcggaggtaatgagatgacagttaaaatgtctct 11935186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 226
Target Start/End: Complemental strand, 1931943 - 1931782
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttga--aa 158  Q
    ||||||||||| ||||||||||||| |||||||||||   ||||||||||||||       ||||||||||||||| || |||||| ||||| ||   ||    
T  1931943 agatctacttttgaacaactcgaacgtgcaagttcttcgatgacttttcgagat-------gagcttaccaccttcttctatcacatgttctctgctgaa 1931851  T
Q  159 attgaaccactgcc-acccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  1931850 attgaaccactgcccacccaaatatttttcatagcttgctctttcggaggtaatgaggcgacacttata 1931782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 18311723 - 18311628
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa 157  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||| |||||| |||||||||| |||||||| |||| ||||||    
T  18311723 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaatatgagc-taccaccttcttccatcactcgttatttgaa 18311628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 35041025 - 35040929
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa 157  Q
    |||||||||||||||||||||| |  |||||||||||   |||||||||||||||||| ||||||||||||||||| |||||||| |||| ||||||    
T  35041025 agatctactttggaacaactcggatttgcaagttcttctctgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgttatttgaa 35040929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 25539990 - 25539943
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgactttt 108  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||    
T  25539990 agatctactttggaacaactcgaacatgcaagttcttcggtgactttt 25539943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 7219292 - 7219330
Alignment:
Q  157 aaattgaaccactgcc-acccaagtatttttcatagctt 194  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  7219292 aaattgaaccactgcccacccaagtatttttcatagctt 7219330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 52 - 234
Target Start/End: Original strand, 13244 - 13429
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  13244 cagcaacaaagatctactttggaacaactcgaacatgcaagttcttcagtgacttttcgagattaaagatgagcttaccaccttcttccatcacacgttc 13343  T
Q  152 tttg--aaaattgaaccactgc-cacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||   ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  13344 tttgcagaaattgaacaactgctcacccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctct 13429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 5e-68; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 52 - 234
Target Start/End: Original strand, 27735366 - 27735551
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27735366 cagcagcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttc 27735465  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||   |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  27735466 tttgcagaaattgaatcactgtccacccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctct 27735551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 52 - 234
Target Start/End: Complemental strand, 9149307 - 9149122
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| || |||||||||||    
T  9149307 cagcagcaaagatctactttggaacaactcgaacatgcaagttcttcgatgacttttcgagatcaaagatgagcttaccaccttcttcaatcacacgttc 9149208  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||   |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  9149207 tttgcagaaattgaaccactgtccacccaagtatttttcatagctttctcttacggcggtaatgaggcgacacttatattttctct 9149122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 3795447 - 3795271
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||| |||||||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||   ||    
T  3795447 agatctattttggaacaactcgaaaatgcaagttcttcggtgacttttcgaaatcaaagatgagcttaccaccttcttccatcacacgttctttgcagaa 3795348  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  3795347 attgaatcactgcccacccaagtatttttcatagttttctctttcgacggtaatgagacgacacttatattttctct 3795271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 52 - 233
Target Start/End: Original strand, 23300037 - 23300221
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||| |||||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  23300037 cagcatcaaagatctactttcgaacaactcgaacatgcaagttcttcgatgatttttcgagatcaaagatgagcttaccaccttcttccatcacacgttc 23300136  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctc 233  Q
    | ||   |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  23300137 tctgcagaaattgaaccactgccctcccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctc 23300221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 52 - 234
Target Start/End: Original strand, 33638992 - 33639177
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||||||||||| || |||||  | ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33638992 cagcagcaaagatctactttggaacaactcgaacatgtaaattcttcggcgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttc 33639091  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||   |||||||| ||||| ||||||||||||||||||||| |||||||||||| || |||||| ||||||||||||| |||||    
T  33639092 tttgtagaaattgaatcactgcccacccaagtatttttcatagatttctctttcggtggcaatgaggcgacacttatattttctct 33639177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 14308867 - 14308691
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  14308867 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 14308768  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||| |||| |||||||||||||    
T  14308767 attgaaccactgcccacccaagtaattttcatagatttctctatcggcggtaatgagatgacaattatattgtctct 14308691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 61 - 226
Target Start/End: Complemental strand, 47174412 - 47174245
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||   ||    
T  47174412 agatctactttggaacaactcgaacgtgcaagtttttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctgcagaa 47174313  T
Q  159 attgaaccactgccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| || |||||||||| ||| |||||||||||||| ||||||| ||||||||||| |||||||||||    
T  47174312 attaaatcactgccacctaagcatttttcatagcttgctctttctgcggtaatgaggcgacacttata 47174245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 226
Target Start/End: Original strand, 9226547 - 9226715
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttcttt--gaaa 158  Q
    ||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||||||||| |    ||    
T  9226547 agatctactttggaacaactcgaacgtgcaagttcttctttgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctactgaa 9226646  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||| ||||| |||||||| ||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  9226647 attgaatcactgcccacccaaatatttttcatagcttgctctttcggtggtaatgaggcgacacttata 9226715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 226
Target Start/End: Original strand, 42245182 - 42245350
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||| || ||||||||  |||||||||| |||| ||||||||||||||||||||| ||||| | ||||||| ||   ||    
T  42245182 agatctactttggaacaactcgaacgtggaagttcttcggtgacttttccagattaaagatgagcttaccaccttcttccattagacgttctctgcagaa 42245281  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  42245282 attgaaccactgcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 42245350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 52 - 226
Target Start/End: Original strand, 38434867 - 38435044
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  38434867 cagcagcaaagatctattttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttc 38434966  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||||||||| ||| |||||||||||||||||| | ||||||||||| |||||||  ||||||||||    
T  38434967 tctgcagaaattgaaccactgcccatccaagtatttttcatagcatgctctttcggcgttaatgaggtgacacttata 38435044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 23766765 - 23766941
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  23766765 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 23766864  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| |||||||||||  ||||||||||| |||| ||||||||||||||| |||| ||||| |||||||    
T  23766865 attgaaccactgcccacccaagtaaatttcatagcttactctatcggcggtaatgagatgacagttatactgtctct 23766941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 33030733 - 33030557
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||  ||| | ||   ||    
T  33030733 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgaacttaccaccttcttccatcacttgttatctgcagaa 33030634  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||  |||| |||||||||||||    
T  33030633 attgaaccactgtccacccaagtatttttcatagcttgctctatcggcggtaatgaggtgacagttatattgtctct 33030557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 77 - 226
Target Start/End: Complemental strand, 42996374 - 42996222
Alignment:
Q  77 aactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattgaaccactg-cca 173  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||   |||||||||||||| |||    
T  42996374 aactcgaacgtgcaagttcttcagtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttctctgcagaaattgaaccactgccca 42996275  T
Q  174 cccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
     |||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  42996274 tccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttata 42996222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 17477826 - 17477650
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| ||   ||    
T  17477826 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttatcaccttcttccatcactcgttctctgcagaa 17477727  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||| ||||||| |||||||||||| |||| | ||||||||||||  |||| ||||| |||||||    
T  17477726 attgaaccactgcccatccaagtaattttcatagcttgctctattggcggtaatgaggtgacagttatactgtctct 17477650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 17575388 - 17575564
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| ||   ||    
T  17575388 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttatcaccttcttccatcactcgttctctgcagaa 17575487  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||| ||||||| |||||||||||| |||| | ||||||||||||  |||| ||||| |||||||    
T  17575488 attgaaccactgcccatccaagtaattttcatagcttgctctattggcggtaatgaggtgacagttatactgtctct 17575564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 42827701 - 42827856
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| ||   ||    
T  42827701 agatctactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttatcaccttcttccatcacatgttctctgcagaa 42827800  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatga 213  Q
    ||||||| | || |||||||||||||||||||||||| || |||||| ||||||||    
T  42827801 attgaacaattgtccacccaagtatttttcatagcttgctgtttcggtggtaatga 42827856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 211
Target Start/End: Original strand, 47163879 - 47164031
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg-aaaa 159  Q
    ||||||| ||||||||||||||||| |||||||||||    ||||||||||||||||||||||||||||||||||| ||||||| ||||||| || | ||    
T  47163879 agatctattttggaacaactcgaacgtgcaagttcttcgaggacttttcgagatcaaagatgagcttaccaccttcttccatcagacgttctctgcagaa 47163978  T
Q  160 ttgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaat 211  Q
    ||||||||||| | |||||||||||||||||||||| |||||||| |||||||    
T  47163979 ttgaaccactgtcaacccaagtatttttcatagcttgctctttcgacggtaat 47164031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 47573781 - 47573947
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  47573781 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 47573880  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  47573881 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 47573947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 17482273 - 17482097
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||   |||||||||||||||||||||||||||| ||||||| |||||||| |||||| ||   ||    
T  17482273 agatctactttggaacaactcgaatttgcaagttcttctatgacttttcgagatcaaagatgagcttatcaccttcttccatcactcgttctctgcagaa 17482174  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| | | ||||||||||  |||| ||||| |||||||    
T  17482173 attgaaccactgcccacccaagtaattttcatagcttgctctattgacggtaatgaggtgacagttatactgtctct 17482097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 17570941 - 17571117
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||   |||||||||||||||||||||||||||| ||||||| |||||||| |||||| ||   ||    
T  17570941 agatctactttggaacaactcgaatttgcaagttcttctatgacttttcgagatcaaagatgagcttatcaccttcttccatcactcgttctctgcagaa 17571040  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| | | ||||||||||  |||| ||||| |||||||    
T  17571041 attgaaccactgcccacccaagtaattttcatagcttgctctattgacggtaatgaggtgacagttatactgtctct 17571117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 8926217 - 8926393
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||| |||||||||||  |||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||| |||| | ||   ||    
T  8926217 agatctactttgaaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagtttaccaccttcttccatcactcgttatctgcagaa 8926316  T
Q  159 attgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||  ||| ||||||| |||||||||||| |||| ||||| ||||||||| |||| ||||| |||||||    
T  8926317 attgaaccactacccatccaagtaattttcatagcttgctctatcggcagtaatgagatgacagttatactgtctct 8926393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 42687489 - 42687313
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  ||||| |||||  |||||||| |||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  42687489 agatctactttggaacaactcgaatttgcaatttcttctgtgactttccgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 42687390  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||| ||||| |||| ||||||| |||| ||||||||||||||  |||| ||||| |||||||    
T  42687389 attgaaccactgcccacctaagtaatttttatagcttgctctatcggcggtaatgaggtgacaattatactgtctct 42687313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 6911803 - 6911969
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa--aat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| || |   ||    
T  6911803 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagtcat 6911902  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| |||||||||| |||||||| | |||||||||    
T  6911903 tgatccatagcccacccaagtatttttcatagcttgctctttcggcagtaatgaggcaacacttata 6911969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 19521077 - 19520927
Alignment:
Q  87 tgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa--aattgaaccactg-ccacccaagtatt 183  Q
    |||||||||||   |||||||||||||| ||||||||||||||||||||| |||||||| |||| | || |  ||||||| ||||| ||||||||||| |    
T  19521077 tgcaagttcttctatgacttttcgagattaaagatgagcttaccaccttcttccatcactcgttatctgcataaattgaatcactggccacccaagtaat 19520978  T
Q  184 tttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||||||||| |||| ||||||||||||||  |||| |||||||||||||    
T  19520977 tttcatagcttgctctatcggcggtaatgagttgacatttatattgtctct 19520927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 61 - 214
Target Start/End: Complemental strand, 5962633 - 5962478
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||| |||||||||||||  | ||| |||||   ||||||||| |||||||||||||||||||||||||| ||||||||  ||| | ||   ||    
T  5962633 agatctactt-ggaacaactcgaatttacaacttcttctatgacttttcaagatcaaagatgagcttaccaccttcttccatcacttgttatctgcagaa 5962535  T
Q  159 attgaaccactgcc-acccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |||||||||||||| ||||||||| |||||||||||| |||| ||||||||||||||    
T  5962534 attgaaccactgccaacccaagtaattttcatagcttgctctatcggcggtaatgag 5962478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 4481716 - 4481784
Alignment:
Q  64 tctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccac 132  Q
    |||||||||||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||||||    
T  4481716 tctactttggaacaactcgaacgtgcaatttcttcggtgacttttcgagatcaaagatgagcttaccac 4481784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 11499795 - 11499720
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttc 136  Q
    ||||||||||||||||||||||||  |||||||||||  ||||| ||||||||||||||| |||||||||||||||    
T  11499795 agatctactttggaacaactcgaatttgcaagttcttctgtgacctttcgagatcaaagacgagcttaccaccttc 11499720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 42917689 - 42917619
Alignment:
Q  157 aaattgaaccactgcc-acccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  42917689 aaattgaatcactgcccaaccaagtatttttcatagctttctctttcggcggtaatgaggcgacgcttata 42917619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 17469684 - 17469587
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttc-gtccatcacacgttctttgaa 157  Q
    ||||||||||||||||| ||||||  ||| | |||||  ||||||||||||||| ||| |||||||||||||||||  |||||||| |||| ||||||    
T  17469684 agatctactttggaacagctcgaatttgctatttcttctgtgacttttcgagataaaatatgagcttaccaccttctttccatcactcgttatttgaa 17469587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 17583530 - 17583627
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttc-gtccatcacacgttctttgaa 157  Q
    ||||||||||||||||| ||||||  ||| | |||||  ||||||||||||||| ||| |||||||||||||||||  |||||||| |||| ||||||    
T  17583530 agatctactttggaacagctcgaatttgctatttcttctgtgacttttcgagataaaatatgagcttaccaccttctttccatcactcgttatttgaa 17583627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 42917740 - 42917696
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttct 96  Q
    ||||| || ||||||||||||||| |||||||| |||||||||||    
T  42917740 cagcagcaaagatctactttggaagaactcgaaaatgcaagttct 42917696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 5e-68; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 52 - 234
Target Start/End: Original strand, 40827348 - 40827533
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  40827348 cagcagcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagatgagcttaccacattcttccatcacacgttc 40827447  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  40827448 tttgcagaaattgaaccactgcccacccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctct 40827533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 48521344 - 48521520
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   ||    
T  48521344 agatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctttgcagaa 48521443  T
Q  159 attgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  48521444 attgaaccactatccacccaagtatttttcatagctttctcttttggcggtaatgaggcgacacttatattttctct 48521520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 55295092 - 55295271
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||| |||||| |||||||    
T  55295092 cagcagcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagataagcttaccaccttcttccatcgcacgttc 55295191  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatatt 228  Q
    ||||   |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  55295192 tttgcagaaattgaaccactgtccacccaagtatttttcatagctttctctttcagcggtaatgaggcgacacttatatt 55295271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 22477640 - 22477464
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||   ||    
T  22477640 agatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgaaatcaaagaggagcataccaccttcttccatcacacgttctttgcagaa 22477541  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  22477540 attgaatcactgcccacccaagtatttttcatagttttctctttcggcggtaatgagacgacacttatattttctct 22477464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 11598286 - 11598462
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||| ||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||   ||    
T  11598286 agatctacttttgaacaactcgaacatgcaagtacttcggtgacttttcgagatcaaagatgagcttaccaccttcttccattacacgttctttgcagaa 11598385  T
Q  159 attgaaccac-tgccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||| | |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  11598386 attgaaccactttccacccaaatatttttcatagctttctctttcggcagtaatgaggcgacacttatattttctct 11598462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 67 - 228
Target Start/End: Original strand, 19893699 - 19893863
Alignment:
Q  67 actttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattgaa 164  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||   ||||||||    
T  19893699 actttggaacaactcgaacatgaaagttcttctgtgacttttcgagatccaagatgagcttaccaccttcttccatcacacgttctttgcagaaattgaa 19893798  T
Q  165 ccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatatt 228  Q
    |||||| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  19893799 ccactgtccacccaagtattcttcatagctttctctttcggtggtaatgaggcgacacttatatt 19893863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 11951297 - 11951473
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||| |||||||||||||||||||||||||||||||  |||| ||||||| ||||||||||||||||||| |||| | ||||||||||||||||   ||    
T  11951297 agatcaactttggaacaactcgaacatgcaagttcttcggtgatttttcgaaatcaaagatgagcttaccaacttctttcatcacacgttctttgcagaa 11951396  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  11951397 attgaatcactgcccaccaaagtatttttcatagctttctctttcggcggtaatgagacgacgcttatattttctct 11951473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 36165324 - 36165488
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||  |||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36165324 cagcaacaaagatctactttggaacaactcgaatgtgcaagttcttcgatgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttc 36165423  T
Q  152 tttg--aaaattgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatga 213  Q
    | ||  ||||||||||||||  |||||||||||||||||||||||| ||||||||| ||||||||    
T  36165424 tatgctaaaattgaaccactacccacccaagtatttttcatagcttgctctttcggtggtaatga 36165488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 63 - 234
Target Start/End: Original strand, 35088162 - 35088336
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgt--tctttgaaaat 160  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||  |||    ||||    
T  35088162 atctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctacagaaat 35088261  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| |||||||||||||    
T  35088262 tgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacaattatattgtctct 35088336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 6104448 - 6104624
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||   ||    
T  6104448 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatttgcagaa 6104547  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| |||| |||||||||| |||| || || |||||||    
T  6104548 attgaaccactgcccacccaagtaattttcatagcttgctctatcggtggtaatgagatgacagttctactgtctct 6104624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 226
Target Start/End: Complemental strand, 8242632 - 8242464
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||| || ||||| ||||||||| ||   ||    
T  8242632 agatccactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccctcttccattacacgttctctgcagaa 8242533  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||| |||||| ||||    
T  8242532 attgaaccactgtccacccaagtatttttcatagcttgctcttttagcggtaatgaggcgacacctata 8242464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 52 - 214
Target Start/End: Complemental strand, 32755427 - 32755262
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||| |||||||||||||||||||| |||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||| ||||     
T  32755427 cagcagcaaagatgtactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgtta 32755328  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    | ||   |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  32755327 tctgcagaaattgaatcactgtccacccaagtatttttcatagcttgctctttcggcggtaatgag 32755262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 31369339 - 31369515
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  31369339 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 31369438  T
Q  159 attgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||  ||||||||||| |||||||||||| |||| |||| |||||||||| |||| ||||| |||||||    
T  31369439 attgaaccactacccacccaagtaattttcatagcttgctctatcggtggtaatgagatgacagttatactgtctct 31369515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 232
Target Start/End: Complemental strand, 23193394 - 23193220
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgt--tctttgaaa 158  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||| | |||  ||| |  ||    
T  23193394 agatctactttggaacaactcgaacgtgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcgctcgttctctatagaa 23193295  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtct 232  Q
    |||||||||||| |||||||||||||||||||| ||| |||  ||||| |||||||| ||||| ||||| |||||    
T  23193294 attgaaccactgcccacccaagtatttttcataacttgctcgatcggctgtaatgaggcgacatttatactgtct 23193220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 214
Target Start/End: Original strand, 52840857 - 52841011
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||| |||||| ||   ||||    
T  52840857 atctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagattaccaccttcttccatcactcgttctctgcagaaat 52840956  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    ||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  52840957 tgaactactgcccacccaagtatttttcatagcttgctctatcggcggtaatgag 52841011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 61 - 226
Target Start/End: Complemental strand, 54512711 - 54512543
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||| |||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||||| |||||||  |||||| ||   ||    
T  54512711 agatctaccttggaacaactcgaacgtgcaagttcttctatgacttttcgagatcaaagatgagcttaccaccttcttccatcattcgttctctgcagaa 54512612  T
Q  159 attgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||||||||  |||||||||||||||||||||| | |||| |||||||||||||| ||||| |||||    
T  54512611 attgaaccactacccacccaagtatttttcatagcctgctctatcggcggtaatgaggcgacagttata 54512543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 54793295 - 54793455
Alignment:
Q  69 tttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattgaacc 166  Q
    ||||||||| ||||||| |||||||||||   | |||||||||||||||||||||||||||||||||| ||||||||||||||| ||   ||||||||||    
T  54793295 tttggaacagctcgaacgtgcaagttcttcgataacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctgcagaaattgaacc 54793394  T
Q  167 actgc-cacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||||| |||| ||||||||||||||||||  |||||||| ||||||||| |||||||||||    
T  54793395 actgcgcacctaagtatttttcatagcttgttctttcggaggtaatgaggcgacacttata 54793455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 61 - 232
Target Start/End: Complemental strand, 49113007 - 49112833
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  |||||||||||||||| |||||||||||||||||||| |||||||| |||| | ||   ||    
T  49113007 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatccaagatgagcttaccaccttcttccatcactcgttatctgcagaa 49112908  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtct 232  Q
     ||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||  |||| ||||| |||||    
T  49112907 gttgaaccactgtccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacagttatactgtct 49112833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 61 - 232
Target Start/End: Original strand, 50771569 - 50771743
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  |||| |||||||||||||||||||||||||||||||| |||||||| | |||| ||   ||    
T  50771569 agatctactttggaacaactcgaatttgcaagttcttctgtgatttttcgagatcaaagatgagcttaccaccttcttccatcactcattctctgcagaa 50771668  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtct 232  Q
    |||||||||||| ||||||||||| |||||||||||| |||| | ||||||||||||  |||| ||||| |||||    
T  50771669 attgaaccactgcccacccaagtaattttcatagcttgctctattggcggtaatgaggtgacagttatactgtct 50771743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 52 - 226
Target Start/End: Original strand, 2845170 - 2845347
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    |||||| | |||| |||||| ||||||||||| | |||||||||||  ||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  2845170 cagcacaaaagatatacttttgaacaactcgatcgtgcaagttcttcggtgactttttgagatcaaagatgagcttaccaccttcttccatcacacgttc 2845269  T
Q  152 tttga---aaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
     | ||   |||||||||||||| ||| |||||| ||||||||||||| |||| |||| ||||||||| |||||||||||    
T  2845270 -tcgacagaaattgaaccactgcccatccaagtttttttcatagcttgctctatcgggggtaatgaggcgacacttata 2845347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 16495814 - 16495655
Alignment:
Q  69 tttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattgaacc 166  Q
    ||||||||| ||||||| |||||||||||   | |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||   ||||| ||||    
T  16495814 tttggaacagctcgaacgtgcaagttcttcgataacttttcgagatcaaagatgagtttaccaccttcttccatcacacgttctctgcagaaattaaacc 16495715  T
Q  167 actgccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||  ||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  16495714 actgcgcccctagtatttttcatagcttgctctttcggaggtaatgaggcgacacttata 16495655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 5252698 - 5252864
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||| ||||| ||   ||||    
T  5252698 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacatgttctctgcagaaat 5252797  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  5252798 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 5252864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 232
Target Start/End: Complemental strand, 50741285 - 50741111
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  |||| |||||||||||||||||||||||||||||||| |||||||| | || | ||   ||    
T  50741285 agatctactttggaacaactcgaatttgcaagttcttctgtgaattttcgagatcaaagatgagcttaccaccttcttccatcactcattatctgcagaa 50741186  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtct 232  Q
    |||||||||||| ||||||||||| |||||||||||| |||| | ||||||||||||  |||| ||||| |||||    
T  50741185 attgaaccactgcccacccaagtaattttcatagcttgctctattggcggtaatgaggtgacagttatactgtct 50741111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 51248293 - 51248117
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  || ||||||||  ||||||||| |||||||||||||| |||||||| ||| |||||||| |||| | ||   ||    
T  51248293 agatctactttggaacaactcgaatgtgaaagttcttctgtgactttttgagatcaaagatgaacttaccacattcttccatcactcgttatctgcagaa 51248194  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||  |||| ||||| |||||||    
T  51248193 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacagttatactgtctct 51248117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 39796797 - 39796963
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  39796797 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcataaat 39796896  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||| | ||||||||||||||||||| | |||||||||    
T  39796897 tgatccatagcccacccaagtatttttcatagcctgctctttcggcggtaatgaggcaacacttata 39796963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 191
Target Start/End: Original strand, 52463245 - 52463387
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||| ||||||||| | || ||||||||||||||||  ||||||||||||||||| ||| |||||| |||    
T  52463245 cagcagcaaagatctactttggaacaactcgaacgtgcaagttcatcagcgacttttcgagatcaataatgagcttaccaccttcttccttcacactttc 52463344  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatag 191  Q
    ||||   |||||||||||||| |||||||||||||||||||||    
T  52463345 tttgcagaaattgaaccactgtccacccaagtatttttcatag 52463387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 234
Target Start/End: Original strand, 52853766 - 52853940
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgt--tctttgaaaat 160  Q
    ||||||||||||||||||||||  |||||||||||  | |||||||| |||||||||||||||||||||||||| |||||||| |||  ||| |  ||||    
T  52853766 atctactttggaacaactcgaatttgcaagttcttctgcgacttttcaagatcaaagatgagcttaccaccttcttccatcactcgttatctgtagaaat 52853865  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||| ||||||||||| ||||||| |||| |||| ||||| ||||||||  |||| ||||| |||||||    
T  52853866 tgaaccactgcccacccaagtaattttcatggcttgctctatcggctgtaatgaggtgacagttatactgtctct 52853940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 231
Target Start/End: Complemental strand, 48976616 - 48976444
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacg-ttctttgaaaa 159  Q
    ||||||||||||||||||||||||  ||||| |||||  ||||||||||||||||||| ||||||||||||||||| |||||||| || ||||    |||    
T  48976616 agatctactttggaacaactcgaatttgcaacttcttctgtgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgtttctgcagaaa 48976517  T
Q  160 ttgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtc 231  Q
    |||||| |||| ||||||||||| |||||||||| | |||| ||||||||||| ||  |||| ||||||||||    
T  48976516 ttgaacgactgcccacccaagtaattttcatagcctgctctatcggcggtaataaggtgacaattatattgtc 48976444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 224
Target Start/End: Complemental strand, 35436774 - 35436662
Alignment:
Q  115 caaagatgagcttaccaccttcgtccatcacacgttctttga--aaattgaaccactgcc-acccaagtatttttcatagctttctctttcggcggtaat 211  Q
    |||||||||||||||||||||| ||||||||||||||| ||   ||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||    
T  35436774 caaagatgagcttaccaccttcttccatcacacgttctctgctgaaattgaaccactacccacccaaatatttttcatagcttgctctttcggcggtaat 35436675  T
Q  212 gagacgacactta 224  Q
    ||| |||||||||    
T  35436674 gaggcgacactta 35436662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 11325966 - 11326122
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||  |||||||||||  |||||||||||  |||||||||||||||||||||| |||||| ||||||| |||||||| |||| | ||   ||    
T  11325966 agatctactttcaaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagataagcttatcaccttcttccatcactcgttatctgctgaa 11326065  T
Q  159 attgaaccac-tgccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |||||||||| | ||||||||||| |||| ||||||| |||| ||| ||||||||||    
T  11326066 attgaaccacttcccacccaagtaattttgatagcttgctctatcgacggtaatgag 11326122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 63 - 194
Target Start/End: Original strand, 21699897 - 21700029
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||||||||||||||||  |||||||| ||  |||||||||||||||||||||||||||  |||||||| |||||||| |||| | ||   ||||    
T  21699897 atctactttggaacaactcgaatttgcaagtttttctgtgacttttcgagatcaaagatgagct--ccaccttcttccatcactcgttatctgcagaaat 21699994  T
Q  161 tgaaccac-tgccacccaagtatttttcatagctt 194  Q
    |||||||| | ||||||||||| ||||||||||||    
T  21699995 tgaaccacttcccacccaagtaattttcatagctt 21700029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 11382999 - 11382931
Alignment:
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatatt 228  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||   |||||||||||||    
T  11382999 tgaaccactgtccacccaagtatttttcatagcttgctctttcggcggtaatgctgcgacacttatatt 11382931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 11383048 - 11383015
Alignment:
Q  64 tctactttggaacaactcgaacatgcaagttctt 97  Q
    |||||||||||||||||||||| |||||||||||    
T  11383048 tctactttggaacaactcgaacgtgcaagttctt 11383015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 5e-68; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 52 - 234
Target Start/End: Original strand, 1515305 - 1515490
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1515305 cagcagcaaagatctactttggaacaactcaaacatgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttc 1515404  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||   |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  1515405 tttgcagaaattgaaccactgtccacccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctct 1515490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 9917013 - 9917189
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||   ||    
T  9917013 agatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgaaatcaaagatgagcttaccaccttcttccatcacacgttctttgcagaa 9917112  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  9917113 attgaatcactgcccacccaagtatttttcatagctttctctttcggcagtaatgagacgacacttatattttctct 9917189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 16883901 - 16883724
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||| | ||||||||||||||| |||||||||||  |||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  16883901 cagcagcaaagatctattgtggaacaactcgaacgtgcaagttcttcggtgactttccgagatcaaagatgagcttaccaccttcttccatcacacgttc 16883802  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16883801 tctgcagaaattgaaccaatgcccacccaagtatttttcatagcttgctctttcggcggtaatgagacgacacttata 16883724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 17041591 - 17041414
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||| | ||||||||||||||| |||||||||||  |||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  17041591 cagcagcaaagatctattgtggaacaactcgaacgtgcaagttcttcggtgactttccgagatcaaagatgagcttaccaccttcttccatcacacgttc 17041492  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   ||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17041491 tctgcagaaattgaaccaatgcccacccaagtatttttcatagcttgctctttcggcggtaatgagacgacacttata 17041414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 17025569 - 17025392
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  17025569 cagcagcaaagatctattttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttc 17025470  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||||||||| ||| |||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  17025469 tctgcagaaattgaaccactgcccatccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttata 17025392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 17037246 - 17037069
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  17037246 cagcagcaaagatctattttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttc 17037147  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||||||||| ||| |||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  17037146 tctgcagaaattgaaccactgcccatccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttata 17037069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 52 - 226
Target Start/End: Original strand, 10821519 - 10821696
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||| ||| ||||||||||||| |||||||||||   ||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  10821519 cagcagcaaagatctattttagaacaactcgaacgtgcaagttcttcgatgacttttcgagatcaaagatgaacttaccaccttcttccatcacacgttc 10821618  T
Q  152 tttg--aaaattgaaccactgcc-acccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  10821619 tctgcagaaattgaaccactgccaacctaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 10821696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 17091754 - 17091577
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  17091754 cagcagcaaagatctattttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttc 17091655  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||||||||| ||| |||||||||||||||||| | ||||||||| ||||||||| |||||||||||    
T  17091654 tctgcagaaattgaaccactgcccatccaagtatttttcatagcatgctctttcggtggtaatgaggcgacacttata 17091577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 21097667 - 21097491
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||   ||    
T  21097667 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatttgcagaa 21097568  T
Q  159 attgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
     ||||||||||  ||||||||||| |||||||||||| |||| |||||| |||||||| |||| |||||||||||||    
T  21097567 tttgaaccactacccacccaagtaattttcatagcttgctctatcggcgataatgagatgacagttatattgtctct 21097491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 26821588 - 26821412
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||||||||||||||   |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  26821588 agatctactttggaacaactcgactttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 26821489  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||| |||||||    
T  26821488 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacaattatactgtctct 26821412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 18093037 - 18093207
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| |         ||||    
T  18093037 cagcaacaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagatgagcttaacaccttctt---------gttc 18093127  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatatt 228  Q
    ||||   |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  18093128 tttgcagaaattgaaccactgtccacccaagtatttttcatagctttctctttcggtggtaatgaggcgacacttatatt 18093207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 30567189 - 30567365
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||| ||||||||||||||||||||||||||||||||| || ||||| |||| | ||   ||    
T  30567189 agatctactttggaacaactcgaatttgcaagttcttctgtgtcttttcgagatcaaagatgagcttaccaccttcttcaatcactcgttatctgcagaa 30567288  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||  |||| |||||||||||||    
T  30567289 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacaattatattgtctct 30567365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 30570874 - 30571050
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||| ||||||||||||||||||||||||||||||||| || ||||| |||| | ||   ||    
T  30570874 agatctactttggaacaactcgaatttgcaagttcttctgtgtcttttcgagatcaaagatgagcttaccaccttcttcaatcactcgttatctgcagaa 30570973  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||  |||| |||||||||||||    
T  30570974 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacaattatattgtctct 30571050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 4811525 - 4811347
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  4811525 cagcagcaaagatctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagatcagagatgagcttaccaccttcttccatcgcacgttc 4811426  T
Q  152 tttg--aaaattgaaccactgcc--acccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||| || ||||   ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||    
T  4811425 tatgtagaaattgaatcattgcccaccccaagtatttttcatagcttgctctttcggcggtaatgaggcgacatttata 4811347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 14753159 - 14752982
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||| |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||  ||||    
T  14753159 cagcaacaaagatttactttggaacaactcgaacgtgcaagttcttcgatgacttttcgagatcaaagatgagcttaccaccttcttccatcactagttc 14753060  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||||||||| |||||||| ||  ||||||||||| ||||||||||||||||||  |||||||||||    
T  14753059 tctgctgaaattgaaccactgtccacccaaataaatttcatagcttgctctttcggcggtaatgaagcgacacttata 14752982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 14323656 - 14323819
Alignment:
Q  66 tactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattga 163  Q
    |||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||  ||||||||    
T  14323656 tactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcaaaaattga 14323755  T
Q  164 accactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
     |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  14323756 tccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 14323819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 1993381 - 1993547
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  1993381 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 1993480  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  1993481 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 1993547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 6343169 - 6343335
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  6343169 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 6343268  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  6343269 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 6343335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 28502117 - 28501951
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  28502117 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 28502018  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  28502017 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 28501951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 61 - 232
Target Start/End: Original strand, 36633410 - 36633584
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||| |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||  ||| | ||   ||    
T  36633410 agatctacgttggaacaactcgaacgtgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcacttgttatctgcagaa 36633509  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtct 232  Q
    ||| |||||||| ||||||||||| |||||||||||| |||| ||||| ||||||||  |||| |||||||||||    
T  36633510 attaaaccactgcccacccaagtaattttcatagcttgctctatcggcagtaatgaggtgacaattatattgtct 36633584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 214
Target Start/End: Complemental strand, 45398719 - 45398554
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  45398719 cagcaacaaagatctactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagttgagcgtaccaccttcttccatcacacgttc 45398620  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    | ||   |||||||| || || |||||||||||||||||||||||| |||| |||| | |||||||    
T  45398619 tctgcagaaattgaatcattgtccacccaagtatttttcatagcttgctctgtcggtgataatgag 45398554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 16724673 - 16724849
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| | || | ||   ||    
T  16724673 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcattatctgcagaa 16724772  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||| ||||||| |||||||||||| |||| || ||| |||||||| |||| ||||| |||||||    
T  16724773 attgaaccactgcccaaccaagtaattttcatagcttgctctatctgcgataatgagatgacagttatactgtctct 16724849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 19167967 - 19168143
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||| ||||||||| ||||||||||||||||| ||  |||| |||| | ||   ||    
T  19167967 agatctactttggaacaactcgaatttgcaagttcttctgtgactttttgagatcaaatatgagcttaccaccttcttctgtcactcgttatctgcataa 19168066  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||  |||| |||||||||||||    
T  19168067 attgaaccactgcccacccaagtacttttcatagcttgctctatcggcggtaatgaggtgacagttatattgtctct 19168143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 214
Target Start/End: Complemental strand, 42885359 - 42885203
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||| ||||||||||||  |||||||||||  |||||||||||||||||||||||||||||||||| || |||||||| |||| | ||   ||    
T  42885359 agatctactttagaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccatcttccatcactcgttatctgccgaa 42885260  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||    
T  42885259 attgaaccactgtccacccaagtaattttcatagcttgctctatcggcggtaatgag 42885203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 45205342 - 45205518
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||||||||||||||||  ||||||||||  ||||||||| |||||||||||||| |||||||||||| |||||||| |||||| ||   ||    
T  45205342 agatctactttggaacaactcgaacgcgcaagttcttctgtgactttttgagatcaaagatgaacttaccaccttcttccatcactcgttctctgcagaa 45205441  T
Q  159 attgaaccactgc-cacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||||||||||| ||||||||||||||||||||||| |||  ||||| |||||| | ||| | ||||| |||||||    
T  45205442 attgaaccactgctcacccaagtatttttcatagcttgctcgatcggctgtaatgtggcgatagttatactgtctct 45205518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 52 - 214
Target Start/End: Original strand, 28380318 - 28380483
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||| |||||||||| |||||||||| |||    
T  28380318 cagcagcaaagatctactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagttgagcgtaccaccttcttccatcacactttc 28380417  T
Q  152 tttg--aaaattgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    | ||   |||||||| || |  |||||||||||||||||||||||| ||||||||| | |||||||    
T  28380418 tctgcagaaattgaatcattacccacccaagtatttttcatagcttgctctttcggtgataatgag 28380483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 33664119 - 33664295
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  |||||||||||||||||| |||||| ||||||||||| |||||||| |||||| ||   ||    
T  33664119 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaggatgagtttaccaccttcttccatcactcgttctctgtagaa 33664218  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||||||| || ||||||||||| |||||||||||| || | | ||||||||||||  |||| ||||| |||||||    
T  33664219 attgaaccattgcccacccaagtaattttcatagcttgctttattggcggtaatgaggtgacagttatactgtctct 33664295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 147
Target Start/End: Original strand, 35286656 - 35286750
Alignment:
Q  53 agcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacac 147  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35286656 agcaccaaagatctacttttgaacaactcgaacgtgcaagttcttccgtgacttttcgagatcaaagatgagcttaccaccttcttccatcacac 35286750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 11448236 - 11448159
Alignment:
Q  157 aaattgaaccactgcc-acccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctc 233  Q
    |||||||||||||||| ||| || ||||||||||||||| |||| ||||||||||||||  |||| ||||| ||||||    
T  11448236 aaattgaaccactgcccacctaaatatttttcatagcttgctctatcggcggtaatgaggtgacaattatactgtctc 11448159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 12588600 - 12588776
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||   ||    
T  12588600 agatctactttggaacaactcgaacatgcaagttcttcggtgacttttcaaaatcaaagatgagcttaccaccttcttccatcacacgttctttgcagaa 12588699  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  12588700 attgaatcactgcccacccaagtatttttcatagttttctctttcggcggtaatgagacgacacttatattttctct 12588776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 10513421 - 10513597
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||  |||    
T  10513421 agatctactttggaacaactcgaatttgcaagttcttttgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttctctgcaaaa 10513520  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| |||||||||||||||||||||||| |||| | ||||||||||||  |||| ||||| |||||||    
T  10513521 attgaaccactgcccacccaagtatttttcatagcttgctctcttggcggtaatgaggtgacagttatactgtctct 10513597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 9702160 - 9701983
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||| ||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  9702160 cagcagcaaagatctattttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccatcttcttccatgacacgttc 9702061  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||||||||| ||| |||||||||||||||||| | |||||| |||||||||||| |||||||||||    
T  9702060 tctgcagaaattgaaccactgcccatccaagtatttttcatagcatgctcttttggcggtaatgaggcgacacttata 9701983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 21030007 - 21029831
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  21030007 agatctactttggaacaactcgaacttgcaagttcttcagtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 21029908  T
Q  159 attgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||  ||||||||||| |||||||||||| | || |||| |||||||||  |||| |||||||||||||    
T  21029907 attgaaccactacccacccaagtaattttcatagcttgcactatcggtggtaatgaggtgacagttatattgtctct 21029831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 7285576 - 7285400
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  7285576 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 7285477  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| |||||| |||||||| |||  ||||| |||||||    
T  7285476 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcgataatgagatgactgttatactgtctct 7285400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 20996264 - 20996440
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||| |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||   ||    
T  20996264 agatctacgttggaacaactcgaacgtgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatttgcagaa 20996363  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||| ||||| ||||||||| || |||| | ||||||||||||  |||| |||||||||||||    
T  20996364 attgaaccactgcccacctaagtaattttcatagtttgctctattggcggtaatgaggtgacagttatattgtctct 20996440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 3397458 - 3397634
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  3397458 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 3397557  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||| ||||||| |||| |||| |||||||||  |||  |||||||||||||    
T  3397558 attgaaccactgcccacccaagtaattttgatagcttgctctatcggtggtaatgaggtgaccgttatattgtctct 3397634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 20349822 - 20349646
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||| ||||||||||||| ||  |||||||||||  ||||||||||||||||||||||||||||||||||||| || ||||| |||||| ||   ||    
T  20349822 agatctattttggaacaactcaaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttctatcactcgttctctgcagaa 20349723  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| | ||||||||||||  |||| |||||||||||||    
T  20349722 attgaaccactgcccacccaagtaattttcatagcttgctctattggcggtaatgaggtgacaattatattgtctct 20349646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 234
Target Start/End: Original strand, 1852252 - 1852426
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||||    
T  1852252 atctactttggaacaactcgaatttgcaagttcttatgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaaat 1852351  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||| ||||| ||||||||||| |||||||||||| |||| || |||||||||||  |||| ||||| |||||||    
T  1852352 tgaatcactgcccacccaagtaattttcatagcttgctctatcagcggtaatgaggtgacagttatactgtctct 1852426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 31295996 - 31296162
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  31295996 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 31296095  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  31296096 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 31296162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 3150924 - 3151080
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| | || | ||   ||    
T  3150924 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactctttatctgcagaa 3151023  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |||||||||||| ||||||||||| |||||||||||| |||  ||||||||||||||    
T  3151024 attgaaccactgcccacccaagtaattttcatagcttgctccatcggcggtaatgag 3151080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 4882172 - 4881996
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||| ||||||||||||||||  | |||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  4882172 agatctaatttggaacaactcgaattttcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 4882073  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    || |||||| || ||||||||||| |||||||||||| |||| ||||||||||||||  |||| |||||||||||||    
T  4882072 atcgaaccattgaccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacagttatattgtctct 4881996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 33611460 - 33611636
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgt--tctttgaaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||  |||    ||    
T  33611460 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctacagaa 33611559  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||| ||||||| |||||||||||| |||| | || |||||||||| |||| ||||| |||||||    
T  33611560 attgaaccactgcccatccaagtaattttcatagcttgctctattggtggtaatgagatgacagttatactgtctct 33611636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 234
Target Start/End: Complemental strand, 30689206 - 30689032
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||||||||||||||||  ||||  |||||  ||||||||||||||||||||||||| ||||||||||| |||||||| |||| | ||   ||||    
T  30689206 atctactttggaacaactcgaatttgcactttcttctgtgacttttcgagatcaaagatgagtttaccaccttcttccatcactcgttatctgcagaaat 30689107  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| || || |||||||    
T  30689106 tgaaccactgaccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttgtactgtctct 30689032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 2195064 - 2194888
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||| |||||||||||||  |||||||||||  |||||||||||||||| |||||||||||||||||||| |||||||| |||| | ||   ||    
T  2195064 agatctacttcggaacaactcgaatttgcaagttcttctgtgacttttcgagatccaagatgagcttaccaccttcttccatcactcgttatctgcagaa 2194965  T
Q  159 attgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||  ||||||||||| |||||||||||| |||  |||||| |||||||| |||| ||||| |||||||    
T  2194964 attgaaccactacccacccaagtaattttcatagcttgctccatcggcgataatgagatgacagttatactgtctct 2194888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 214
Target Start/End: Complemental strand, 19447902 - 19447746
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  |||||||||||| |||||||||||||||| ||||||| |||||||| |||| | ||   ||    
T  19447902 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgaaatcaaagatgagcttatcaccttcttccatcactcgttatctgccgaa 19447803  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |||||||||||| ||||||||||| |||| ||||||| |||| ||||||||||||||    
T  19447802 attgaaccactgcccacccaagtaattttgatagcttgctctatcggcggtaatgag 19447746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 226
Target Start/End: Original strand, 3210520 - 3210686
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||| ||||| ||||||||||| |||||||||||   |||||||| ||||||||||||||||||||||| ||| |||||  || ||||| ||   ||    
T  3210520 agatctattttgggacaactcgaacgtgcaagttcttcgatgactttttgagatcaaagatgagcttaccacattcttccat--catgttctctgcagaa 3210617  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||||||||| |||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||    
T  3210618 attgaaccactgcccacccaagtatttttcatagcttactctttcagcggcaatgaggcgacacttata 3210686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 63 - 232
Target Start/End: Complemental strand, 3028647 - 3028476
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    |||||||||| |||||||||||  |||||||||||  ||| ||||||||||||||||||||||||||||||||| |||||||| |||| | ||  |||||    
T  3028647 atctactttgtaacaactcgaatttgcaagttcttctgtg-cttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcaaaaat 3028549  T
Q  161 tgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtct 232  Q
    |||||||||  ||||||||||| |||||||| ||| |||| ||||||||||||||  |||| ||||| |||||    
T  3028548 tgaaccactccccacccaagtaattttcataacttgctctatcggcggtaatgaggtgacaattatactgtct 3028476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 26321395 - 26321571
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  | |||||||||   |||||||||| ||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  26321395 agatctactttggaacaactcgaatttccaagttcttctatgacttttcgggatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 26321494  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| |||||||| || |||||||||| | | || ||||||||||||||| |||| ||||| |||||||    
T  26321495 attgaaccactgcccacccaaataattttcatagcgtgcactatcggcggtaatgagatgacagttatactgtctct 26321571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 19395264 - 19395087
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||| |||||||| |||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   |||||||||| |    
T  19395264 cagcagcaaagatctactttagaacaacttgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgtgc 19395165  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||||   ||||||| |||  | ||||||||||||||| |||||||| ||||||| ||||||||||| |||| ||||||    
T  19395164 tttgcagaaattgatccatagcccacccaagtattttccatagcttgctctttctgcggtaatgaggcgacgcttata 19395087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 33929701 - 33929607
Alignment:
Q  53 agcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacac 147  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33929701 agcaccaaagatctacttttgaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacac 33929607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 214
Target Start/End: Complemental strand, 41780727 - 41780571
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttcttt--gaaa 158  Q
    ||||||||||||||||||||||||| ||| |||||||   |||||||||||||| ||||||||||||||||||||  ||||||||||| ||| |    ||    
T  41780727 agatctactttggaacaactcgaacgtgctagttcttcgatgacttttcgagataaaagatgagcttaccaccttattccatcacacgctctctccagaa 41780628  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    ||||||||| || ||||| ||||||||||||||| || ||||||||| |||||||||    
T  41780627 attgaaccattgtccaccaaagtatttttcatagtttgctctttcggtggtaatgag 41780571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 290453 - 290339
Alignment:
Q  115 caaagatgagcttaccaccttcgtccatcacacgttctttga--aaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaat 211  Q
    |||||||||||||||||||||| ||||||||| ||||| ||   |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  290453 caaagatgagcttaccaccttcttccatcacatgttctctgctgaaattgaaccactggccacccaaatatttttcatagcttgctctttcggcggtaat 290354  T
Q  212 gagacgacacttata 226  Q
    ||| |||||||||||    
T  290353 gaggcgacacttata 290339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 287341 - 287447
Alignment:
Q  108 tcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcgg 204  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||   |||||||||||||| || ||||| ||||||||||||||||||||||||     
T  287341 tcgagatcaaagatgagcttaccaccttcttccatcacacgttctctgcagaaattgaaccactgccctcccaaatatttttcatagctttctctttcgt 287440  T
Q  205 cggtaat 211  Q
    |||||||    
T  287441 cggtaat 287447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 17996479 - 17996383
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa 157  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||| ||||| ||||||||||| |||||||| |||| ||||||    
T  17996479 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaatatgagtttaccaccttcttccatcactcgttatttgaa 17996383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 20757860 - 20757764
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa 157  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||| |||| |||||||||||| | |||||| |||| ||||||    
T  20757860 agatctactttggaacaactcgaatttgcaagttcttatgtgacttttcgagatcaaatatgatcttaccaccttctttcatcactcgttatttgaa 20757764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 38934376 - 38934280
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa 157  Q
    ||||||||||||||||||||||||  ||||| |||||   |||||||||||||||||| ||||||||||||||||| |||||||| |||| ||||||    
T  38934376 agatctactttggaacaactcgaatttgcaatttcttctatgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgttatttgaa 38934280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 27065797 - 27065623
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||| |||||||||||  || || |||||  ||||||||||||||||||||||  ||||||||||||| |||||||| |||| | ||   ||    
T  27065797 agatctactttgcaacaactcgaatttgtaaattcttctgtgacttttcgagatcaaagat--gcttaccaccttcttccatcactcgttatctgcagaa 27065700  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| ||||| |||||| || | |||| | |||||||  |||| ||||| |||||||    
T  27065699 attgaaccactgtccacccaagtaattttcgtagcttgctttatcggtgataatgaggtgacagttatactgtctct 27065623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 35707965 - 35708141
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||   ||    
T  35707965 agatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgaaatcaaagatgagcataccaccttcttccatcacacgttctttgcagaa 35708064  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  35708065 attgaatcactgcccacccaagtatttttcatagttttctctttcggcggtaatgagacgacacttatattttctct 35708141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 52 - 234
Target Start/End: Complemental strand, 40622108 - 40621924
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  40622108 cagcagcaaagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagatgag-ttaccaccttcttccatcacatgttc 40622010  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    | ||   |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  40622009 tgtgcagaaattgaaacactgtccacccaagtatttttcataactttctctttcggcggtaatgaggcgacacttatattttctct 40621924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 574484 - 574659
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||   ||    
T  574484 agatctactttggaacaactcgaacatgcaagttcttcggtgatttttcgaaatcaaagatgagcttaccaccttcttccatcacatgttctttgcagaa 574583  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||| ||||| ||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||    
T  574584 attgaatcactgcccacccaagtatttttcatagctttctatttcggcgat-atgagacgacacttatattttctct 574659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 61 - 222
Target Start/End: Complemental strand, 8530782 - 8530618
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||   ||    
T  8530782 agatctactttggaacaactcgaacatgcaagttcttcggtgaattttcgagatcaaagatgaacttaccactttcttccatcacacgttctttgcagaa 8530683  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacact 222  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  8530682 attgaaccactgcccacccaaatatttttcatagctttctctttcgacggtaatgaggcgacact 8530618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 52 - 234
Target Start/End: Complemental strand, 17740000 - 17739816
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||| ||||||||||||||||||||||||| ||||||  |||||||||| |||||||| ||||||||||||||||| |||||||||| |||    
T  17740000 cagcagcaaagatatactttggaacaactcgaacatgcatgttcttcggtgacttttccagatcaaatatgagcttaccaccttcttccatcacacattc 17739901  T
Q  152 tttg--aaaattgaaccactgccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||   |||||||||||||  |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  17739900 tttgcagaaattgaaccactatccaccaagtatttttcatagctttctctttcgacggtaatgagacgacacttatattttctct 17739816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 47720406 - 47720582
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||   ||    
T  47720406 agatctacttttgaacaactcgaacgtgcaagttctttgatgacttttcgagatcaaagataagcttaccaccttcttccatcacacgttctctgctgaa 47720505  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| | ||||||||||||| |||||    
T  47720506 attgaaccactgtccatccaagtatttttcatagcttgctctttcggcggtaatggggcgacacttatattttctct 47720582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 23478862 - 23478686
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  23478862 agatctactttggaacaactcgaatttgcaagttcttttgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcataa 23478763  T
Q  159 attgaaccactgc-cacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||| |||||||    
T  23478762 attgaaccactgctcacccaagtaattttcatagcttgctctatcggcggtaatgagatgacatttatactgtctct 23478686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 52 - 225
Target Start/End: Original strand, 3839699 - 3839875
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||| || ||||| ||  |||| ||||| |||||||||||||||||||||||||| ||||||||||| ||    
T  3839699 cagcagcaaagatctactttggaacaactcgaacgtggaagtttttcggtgaattttccagatcaaagatgagcttaccaccttcttccatcacacgctc 3839798  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttat 225  Q
    | ||   |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  3839799 tctgcagaaattgaaccactgcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttat 3839875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 34056900 - 34057076
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  34056900 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 34056999  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||| |||||||    
T  34057000 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctct 34057076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 61 - 226
Target Start/End: Complemental strand, 1944444 - 1944275
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttcttt---gaa 157  Q
    ||||||| |||||| |||||| ||| |||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||||||| | |   |||    
T  1944444 agatctattttggatcaactcaaacgtgcaagttcttcgatgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttttctgcagaa 1944345  T
Q  158 aattgaaccactgcc-acccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  1944344 aattgaaccactgccaaccaaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 1944275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 54331980 - 54332156
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||| ||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  54331980 agatctactttggaacaactcgaatttgcaagttcttctgtgactttttgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 54332079  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||| |||||||    
T  54332080 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacaattatactgtctct 54332156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 77 - 226
Target Start/End: Original strand, 26870637 - 26870789
Alignment:
Q  77 aactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattgaaccactg-cca 173  Q
    ||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||   |||||||||||||| |||    
T  26870637 aactcgaatgtgcaagttcttcagtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttctctgcagaaattgaaccactgccca 26870736  T
Q  174 cccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
     |||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  26870737 tccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttata 26870789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 37701936 - 37702112
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgt--tctttgaaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||  |||    ||    
T  37701936 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctacagaa 37702035  T
Q  159 attgaaccac-tgccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||| | ||||||||||| |||||||||||| |||| ||||||||||||||  |||| |||||||||||||    
T  37702036 attgaaccacttcccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacaattatattgtctct 37702112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 38007796 - 38007620
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  38007796 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 38007697  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||| | ||| ||| |||||||||||||||||||| |||| ||||||||||||||  |||| |||||||||||||    
T  38007696 attgaatcgctgcccatccaagtatttttcatagcttgctctatcggcggtaatgaggtgacagttatattgtctct 38007620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 55999034 - 55999210
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| || ||||| |||| | ||   ||    
T  55999034 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttctatcactcgttatctgcagaa 55999133  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||  |||| ||||| |||||||    
T  55999134 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacagttataatgtctct 55999210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 234
Target Start/End: Original strand, 14829850 - 14830024
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||||||  ||||||| |||| | ||   ||||    
T  14829850 atctactttggaacaactcgaacttgcaagttcttctgtgactttttgagatcaaagatgagcttaccaccttctcccatcactcgttatctgcagaaat 14829949  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||| ||||||||||| |||||||||||| |||| |||||| |||||||| |||| ||||| |||||||    
T  14829950 tgaaccactgcccacccaagtaattttcatagcttgctctatcggcgataatgagatgacaattatactgtctct 14830024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 61 - 214
Target Start/End: Complemental strand, 36857040 - 36856884
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||| |||||||||||||||||||| ||| |||||||| |||| | ||   ||    
T  36857040 agatctactttggaacaactcgaatttgcaagttcttttgtgacttttcgatatcaaagatgagcttaccactttcttccatcactcgttatctgcagaa 36856941  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||    
T  36856940 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgag 36856884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 15520666 - 15520500
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  15520666 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 15520567  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  15520566 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 15520500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 740752 - 740915
Alignment:
Q  66 tactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattga 163  Q
    |||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   |||||||    
T  740752 tactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaattga 740851  T
Q  164 accactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
     |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  740852 tccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 740915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 33503335 - 33503491
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  |||||||||||| |||||||||||||||| ||||||| |||||||| |||| | ||   ||    
T  33503335 agatctactttggaacaactcgaatttgcaagttcttatgtgacttttcgaaatcaaagatgagcttatcaccttcttccatcactcgttatctgcagaa 33503434  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |||||||||||| ||||||||||| ||||| |||||| |||| ||||||||||||||    
T  33503435 attgaaccactgcccacccaagtaattttcgtagcttgctctatcggcggtaatgag 33503491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 35495880 - 35496036
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||| ||||||||||||  |||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||| |||| | ||   ||    
T  35495880 agatctacttttgaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagtttaccaccttcttccatcactcgttatctgcagaa 35495979  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||| ||||||||||    
T  35495980 attgaaccactgtccacccaagtaattttcatagcttgctctatcgtcggtaatgag 35496036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 39743083 - 39743259
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||  ||  |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| |||| | ||   ||    
T  39743083 agatctactttggaacaacttaaatttgcaagttcttttgtgacttttcgagatcaaagatgagcttaccaccttcttccaccactcgttatctgcagaa 39743182  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||| ||||| |||||||| ||| |||| ||||||||||||||  |||| ||||| |||||||    
T  39743183 attgaaccactgcccacctaagtaattttcataacttgctctatcggcggtaatgaggtgacagttatactgtctct 39743259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 231
Target Start/End: Original strand, 19831734 - 19831907
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgt--tctttgaaa 158  Q
    |||| |||||||||||||||||||  |||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||| |||  |||    ||    
T  19831734 agatttactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgttatctacagaa 19831833  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtc 231  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||| ||||||||||  |||| ||||| ||||    
T  19831834 attgaaccactgcccacccaagtaattttcatagcttgctctatcgacggtaatgaggtgacaattatactgtc 19831907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 28135403 - 28135579
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  || ||||||||  |||||||||||||||||||||||||||||||| |||| |||||||| |||| | ||   ||    
T  28135403 agatctactttggaacaactcgaatttgtaagttcttctgtgacttttcgagatcaaagatgagcttaccaacttcttccatcactcgttatatgcagaa 28135502  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||| |||||  |||||||||||  ||| ||| ||||||||||  |||| |||||||||||||    
T  28135503 attgaaccactgcccacctaagtaactttcatagcttgttctatcgacggtaatgaggtgacagttatattgtctct 28135579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 13628004 - 13627828
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||| |||||||||||||||  | |||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||||  ||| | ||   ||    
T  13628004 agatctaccttggaacaactcgaattttcaagttcttctgtgtcttttcgagatcaaagatgagcttaccaccttcttccatcacttgttatctgcagaa 13627905  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||| | ||||| ||||| |||||||||||| |||| ||||||||||||||  |||| ||||| |||||||    
T  13627904 attgaaccaccgcccacctaagtaattttcatagcttgctctatcggcggtaatgaggtgacaattatactgtctct 13627828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 7644129 - 7644297
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaaaat 160  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||| |||| | ||         
T  7644129 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagtttaccaccttcttccatcactcgttatctg----- 7644223  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
      |||||||| |||||||||||||||||||||||| |||| || | ||||||||   |||| ||||| |||||||    
T  7644224 -caaccactgcccacccaagtatttttcatagcttgctctatcagaggtaatgaagtgacagttatactgtctct 7644297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 53342360 - 53342186
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgt--tctttgaaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||| ||||||||||||||||||||||| ||||| |||||||| |||  |||  | ||    
T  53342360 agatctactttggaacaactcgaatttgcaagttcttctgtgacttctcgagatcaaagatgagcttacctccttcttccatcactcgttatctgcggaa 53342261  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| ||||| ||||||   || ||| ||||||||||  |||| ||||| |||||||    
T  53342260 attgaaccactgcccacccaagtaattttcttagctt--gctatcgtcggtaatgaggtgacagttatactgtctct 53342186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 214
Target Start/End: Complemental strand, 17699128 - 17698972
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  ||| |||| ||  |||||||||||||||||||||||||||||| |||||| || ||||| |||| | ||   ||    
T  17699128 agatctactttggaacaactcgaatttgctagtttttctgtgacttttcgagatcaaagatgagcttactaccttcttctatcactcgttatctgcagaa 17699029  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |||||||||||| ||||||||||| |||||||||||| || | ||||| ||||||||    
T  17699028 attgaaccactgcccacccaagtaattttcatagcttgctttatcggccgtaatgag 17698972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 52 - 191
Target Start/End: Original strand, 41984561 - 41984703
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||| ||||||||| |  |||||||||| ||||||| ||||||||||| |||||| ||| |||||| |||    
T  41984561 cagcagcaaagatctactttggaacaactcgaacgtgcaagttcatcggtgacttttcaagatcaatgatgagcttactaccttcttccttcacactttc 41984660  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatag 191  Q
    | ||   |||||||||||||| |||||||||||| ||||||||    
T  41984661 tctgcagaaattgaaccactgcccacccaagtatgtttcatag 41984703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 22116379 - 22116473
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa 157  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||| |||| ||||||    
T  22116379 atctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgttatttgaa 22116473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 2776244 - 2776148
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa 157  Q
    ||||||||||||||||||||||||  ||||| |||||  ||||||||||||||||||| ||||||||||||||||| |||||||| |||| ||||||    
T  2776244 agatctactttggaacaactcgaatttgcaatttcttctgtgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgttatttgaa 2776148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 5272612 - 5272695
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatca 144  Q
    ||||||||||||||||||||||||  |||||||||||  | ||||||||||||||||||||||||||||||||||| |||||||    
T  5272612 agatctactttggaacaactcgaatttgcaagttcttctgcgacttttcgagatcaaagatgagcttaccaccttcttccatca 5272695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 21353051 - 21352954
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttc-gtccatcacacgttctttgaa 157  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||| ||| |||||||||||||  |||||||| |||| ||||||    
T  21353051 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaatatgggcttaccaccttctttccatcactcgttatttgaa 21352954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 1e-62; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 10763323 - 10763147
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||   ||    
T  10763323 agatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgaaatcaaagatgagcttaccaccttcttccatcacacgttctttgtagaa 10763224  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||| ||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  10763223 attgaatcactgcccacccgagtatttttcatagttttctctttcggcggtaatgagacgacacttatattttctct 10763147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 67 - 228
Target Start/End: Complemental strand, 52309769 - 52309605
Alignment:
Q  67 actttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattgaa 164  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||    
T  52309769 actttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctttgcagaaattgaa 52309670  T
Q  165 ccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatatt 228  Q
     ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  52309669 acactgtccacccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatatt 52309605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 29840996 - 29841172
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||   ||    
T  29840996 agatctactttggaacaactcgaacatgcaagttcttcggtgatttttcgaaatcaaagatgagcttaccaccttcttccatcacacgttctttgcagaa 29841095  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  29841096 attgaatcactgcccacccaagtatttttcatagttttctctttcgacggtaatgagacgacacttatattttctct 29841172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 52 - 234
Target Start/End: Original strand, 51966033 - 51966218
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  51966033 cagcaacaaagatctactttggaaaaactcgaacatgcaatttcttcggtgacttttcgagatcaaagatgagcttaccacctt-ttccatcacacgttc 51966131  T
Q  152 tttg--aaaattgaaccactgcc--acccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||   ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  51966132 tttgcagaaattgaaccactgcccaccccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctct 51966218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 42682327 - 42682155
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa--a 158  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||| | ||||    |||||||||||||||| |||||||||||||||||| |  |    
T  42682327 agatctactttggaacaactcgaacatgcaagttcttcggtgacttttcaaaatca----tgagcttaccaccttcttccatcacacgttctttgcagaa 42682232  T
Q  159 attgaaccactgcc-acccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  42682231 attgaatcactgcccacccaagtatttttcatagttttctctttcggcggtaatgagacgacacttatattttctct 42682155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 52 - 234
Target Start/End: Complemental strand, 50560992 - 50560807
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||| |||||||||| ||||||||||||||   ||| |||||||||||||||||||| |||||| |||| ||||||||||||||    
T  50560992 cagcagcaaagatctactttagaacaactcggacatgcaagttcttcgctgaattttcgagatcaaagatgagtttaccatcttcttccatcacacgttc 50560893  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||   |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  50560892 tttgcagaaattgaaccactgcccactcaagtatttttcatagctttctctttcgggggtaatgaggcgacacttatattttctct 50560807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 31619630 - 31619454
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  31619630 agatctactttggaacaactcgaacttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 31619531  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||| |||||||    
T  31619530 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacaattatactgtctct 31619454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 18814160 - 18813984
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  18814160 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 18814061  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||| |||||||    
T  18814060 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctct 18813984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 34687528 - 34687352
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  34687528 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 34687429  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||| |||||||    
T  34687428 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctct 34687352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 52 - 214
Target Start/End: Complemental strand, 45004683 - 45004518
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  45004683 cagcagcaaagatctactttggaacaacttgaacgtgcaagttctttggtgacttttcgagatcaaagatgaacttaccaccttcttccatcacacgttc 45004584  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    | ||   ||||||||||| || |||||||| ||||||||||||||| ||||||||| |||||||||    
T  45004583 tctgtagaaattgaaccattgtccacccaactatttttcatagcttgctctttcggtggtaatgag 45004518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 16031914 - 16032070
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||   ||    
T  16031914 agatctactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctgcagaa 16032013  T
Q  159 attgaaccactgc-cacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    ||||||||| ||| | ||||| ||||||||||||||| ||||||||| |||||||||    
T  16032014 attgaaccattgctcgcccaaatatttttcatagcttgctctttcggtggtaatgag 16032070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 15315200 - 15315023
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||| ||||||||||||||||| ||||| |||||   ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  15315200 cagcagcaaagatctattttggaacaactcgaacgtgcaaattcttcgatgacttttcgagatcaaagatgagctttccaccttcttccatcacacgttc 15315101  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   ||||||||||| || ||||| |||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  15315100 tctgtagaaattgaaccaatgcccacctaagtatttttcatagcttgctctttcggcggtaatgacgcgacacttata 15315023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 52 - 214
Target Start/End: Complemental strand, 17671256 - 17671092
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||  ||||||||||||||| |||  |||||||||||||||| ||||||||||||||    
T  17671256 cagcagcaaagatctactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagataaaatgtgagcttaccaccttcttccatcacacgttc 17671157  T
Q  152 tttg-aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    | ||  ||||||||||| || |||||||||||||||||||||||| ||||||||| | |||||||    
T  17671156 tctgtgaaattgaaccattgcccacccaagtatttttcatagcttgctctttcggtgttaatgag 17671092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 52 - 226
Target Start/End: Original strand, 28566019 - 28566196
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||| || ||||||||| ||||||| ||||||||||| | | |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28566019 cagcagcaaagatatattttggaacagctcgaacgtgcaagttcttcaataacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttc 28566118  T
Q  152 tttga--aaattgaaccactgc-cacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | |||  ||| ||||||||||| |||| || |||||||||||||||  |||||||| ||||||||| |||||||||||    
T  28566119 tctgaagaaactgaaccactgcacacctaattatttttcatagcttgatctttcggaggtaatgaggcgacacttata 28566196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 52 - 214
Target Start/End: Complemental strand, 36681194 - 36681029
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||| |||| |||||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  36681194 cagcagcaaagatctactttggaacaacttgaacgtgcaagttcttcggtgacttttcgagatcaaagatgaacttaccaccttcttccatcacacgttc 36681095  T
Q  152 t--ttgaaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |   |  ||||||||||| || |||||||| ||||||||||||||| ||||||||| |||||||||    
T  36681094 tccgtagaaattgaaccattgcccacccaactatttttcatagcttgctctttcggtggtaatgag 36681029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 41830358 - 41830534
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  41830358 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcataa 41830457  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||||| | || ||||||||||| |||||||||||| || | ||||||||||||||| |||| ||||| |||||||    
T  41830458 attgaactagtgcccacccaagtaattttcatagcttgctgtatcggcggtaatgagatgacagttatactgtctct 41830534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 18111525 - 18111359
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  18111525 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 18111426  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  18111425 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 18111359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 43254996 - 43255162
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  43254996 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 43255095  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  43255096 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 43255162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 50395410 - 50395576
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  50395410 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 50395509  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  50395510 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 50395576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 12714427 - 12714250
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||| || ||||||||| ||||||| |||||||||||   | | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  12714427 cagcatcaaagatatattttggaacagctcgaacgtgcaagttcttcgataaattttcgagatcaaagatgagcttaccaccttcttccatcacacgttc 12714328  T
Q  152 tttg--aaaattgaaccactgc-cacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   ||||||||||||||| |||| |||||||||||| ||||| ||||||||| ||||||||| |||||||||||    
T  12714327 tctgcagaaattgaaccactgcgcacctaagtatttttcaaagcttgctctttcggaggtaatgaggcgacacttata 12714250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 34692056 - 34691880
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgt--tctttgaaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||  |||    ||    
T  34692056 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctacagaa 34691957  T
Q  159 attgaaccac-tgccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||| | ||||||||||| |||||||||||| |||| | || |||||||||| |||| ||||| |||||||    
T  34691956 attgaaccacttcccacccaagtaattttcatagcttgctctattggtggtaatgagatgacagttatactgtctct 34691880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 48340270 - 48340094
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||| |||||||||||| |||||||||||   |||||||| |||||||||||||| |||||||||||| |||||||| |||||| ||   ||    
T  48340270 agatctactttgaaacaactcgaacgtgcaagttcttctatgactttttgagatcaaagatgaacttaccaccttcttccatcactcgttctctgcagaa 48340171  T
Q  159 attgaaccactgc-cacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||||||||||| ||||||||||||||||||||||| |||  ||||| |||||| | ||||| ||||| |||||||    
T  48340170 attgaaccactgctcacccaagtatttttcatagcttgctcgatcggctgtaatgtggcgacagttatactgtctct 48340094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 13662723 - 13662882
Alignment:
Q  69 tttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattgaacc 166  Q
    ||||||||| ||||||| |||||||||||   | |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||   ||||| ||||    
T  13662723 tttggaacagctcgaacgtgcaagttcttcgataacttttcgagatcaaagatgagtttaccaccttcttccatcacacgttctctgcagaaattaaacc 13662822  T
Q  167 actgccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||  ||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  13662823 actgcgcccctagtatttttcatagcttgctctttcggaggtaatgaggcgacacttata 13662882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 52521877 - 52522053
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||| || |||||||| |||||||| |||| | ||   ||    
T  52521877 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagtttgccaccttcttccatcactcgttatctgcagaa 52521976  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||  |||| |||||||||| |||| ||| | |||||||    
T  52521977 attgaaccactgcccacccaagtaattttcatagcttgctccatcggtggtaatgagatgacagttacactgtctct 52522053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 232
Target Start/End: Original strand, 41963239 - 41963413
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||||||||| |||||  |||||||||||  ||||||||||||||||||||||||||||| | ||||| |||||||| | || | ||   ||    
T  41963239 agatctactttggaacaaatcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaactccttcttccatcactctttatctgcagaa 41963338  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtct 232  Q
    |||||||||||| ||||||||||| ||||||||| || |||| ||||||||||||||| |||| ||||| |||||    
T  41963339 attgaaccactgcccacccaagtaattttcatagtttgctctatcggcggtaatgagatgacagttatactgtct 41963413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 147
Target Start/End: Original strand, 12246142 - 12246236
Alignment:
Q  53 agcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacac 147  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12246142 agcaccaaagatctacttttgaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacac 12246236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 38845533 - 38845689
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||| ||||||||  |||||||||||  ||||||||||||||||| ||||||||||||||||||| |||||||| || | | ||   ||    
T  38845533 agatctactttggaataactcgaatttgcaagttcttctgtgacttttcgagatcagagatgagcttaccaccttcttccatcactcgctatctgcagaa 38845632  T
Q  159 attgaaccac-tgccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |||||||||| | ||||||||||| |||| ||||||| |||| ||||||||||||||    
T  38845633 attgaaccacttcccacccaagtaatttttatagcttgctctatcggcggtaatgag 38845689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 44406316 - 44406220
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa 157  Q
    ||||||||||||||||||||||||  |||||||| ||  ||||||||||||||||||| ||||| ||||||| ||| |||||||| |||| ||||||    
T  44406316 agatctactttggaacaactcgaatttgcaagttattctgtgacttttcgagatcaaatatgagtttaccacgttcttccatcactcgttatttgaa 44406220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 24294468 - 24294395
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttc 136  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||    
T  24294468 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttc 24294395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 2e-58; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 52 - 234
Target Start/End: Complemental strand, 41156325 - 41156140
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| | || |||||||||    
T  41156325 cagcaacatagatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgagatcaaaaatgagcttaccaccttctttcaacacacgttc 41156226  T
Q  152 ttt--gaaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  41156225 tttacagaaattgagccactgtccacccaagtatttttcatagctttctctttcggcggtaatgaggcgacacttatattttctct 41156140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 52 - 226
Target Start/End: Original strand, 45293878 - 45294055
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| || |||||||||||    
T  45293878 cagcagcaaagatctactttggaacaactcgaacatgcaagttctttagtgacttttcaagatcaaagatgagcttaccactttcttctatcacacgttc 45293977  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  45293978 tctgcagaaattgaatcactgcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 45294055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 52 - 233
Target Start/End: Complemental strand, 12760161 - 12759978
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||||||| ||||||||| ||||    
T  12760161 cagcaacaaagatctactttggaacaactcaaacatgcaagttcttcggtgacttttcgaaatcaaagatgagcttaccaccttcttccatcacaggttc 12760062  T
Q  152 tttg--aaaattgaaccactgccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctc 233  Q
    ||||   |||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| ||  ||||||||| ||||    
T  12760061 tttgcagaaattgaaccactgccgcccaaatatttttcatagctttctctttcggccgtaatgaggcggtacttatattttctc 12759978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 52 - 234
Target Start/End: Complemental strand, 41977145 - 41976960
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||| |    
T  41977145 cagcagcaaagatctactttggaacaactcaaacatgcaagttcttcggtgacttttcgagatcaaagatgagtttaccaccttcttccatcacacgtcc 41977046  T
Q  152 tttg--aaaattgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||   |||||||||||||  ||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||||| |||||    
T  41977045 tttgcagaaattgaaccactacccacccaggtatttttcataactttatctttcggcggtaatgaggcgacacttatattttctct 41976960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 41907544 - 41907367
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  41907544 cagcagcaaagatctactttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgaacttaccaccttcttccatcacacgttc 41907445  T
Q  152 tttg--aaaattgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||||||||  |||||||||||||||||||||||| |||||||||| |||||||| ||||| |||||    
T  41907444 tctgctgaaattgaaccactacccacccaagtatttttcatagcttgctctttcggcagtaatgaggcgacaattata 41907367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 19247798 - 19247621
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  19247798 cagcagcaaagatctactttggaacaactcgaacatgtaagttctttggtgactttttgagatcaaagatgagcttaccaccttcttccatcacatgttc 19247699  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||| || || |||||||||||||||||||||||| || ||||||| |||||||| |||||||||||    
T  19247698 tctgcagaaattgaatcattgcccacccaagtatttttcatagcttgctatttcggcagtaatgaggcgacacttata 19247621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 19320982 - 19320805
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  19320982 cagcagcaaagatctactttggaacaactcgaacatgtaagttctttggtgactttttgagatcaaagatgagcttaccaccttcttccatcacatgttc 19320883  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||| || || |||||||||||||||||||||||| || ||||||| |||||||| |||||||||||    
T  19320882 tctgcagaaattgaatcattgcccacccaagtatttttcatagcttgctatttcggcagtaatgaggcgacacttata 19320805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 14079140 - 14079316
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  14079140 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 14079239  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||| |||||||    
T  14079240 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatactgtctct 14079316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 77 - 226
Target Start/End: Original strand, 12250520 - 12250672
Alignment:
Q  77 aactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattgaaccactg-cca 173  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||   |||||||||||||| |||    
T  12250520 aactcgaacgtgcaagttcttcagtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttctctgcagaaattgaaccactgccca 12250619  T
Q  174 cccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
     |||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  12250620 tccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttata 12250672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 30826128 - 30825952
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||| ||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  30826128 agatctactttggaacaactcgaatttgcaagttcttctgtgactttttgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 30826029  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||| | |||| |||||||||||||    
T  30826028 attgaaccactgtccacccaagtaattttcatagcttgctctatcggcggtaatgaaatgacagttatattgtctct 30825952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 226
Target Start/End: Complemental strand, 39204308 - 39204140
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttcttt--gaaa 158  Q
    ||||||| |||| |||||||||||| |||||||||||   |||||||||||||||||||||||| ||||||||||| ||||||||||||||| |    ||    
T  39204308 agatctattttgcaacaactcgaacgtgcaagttcttcgatgacttttcgagatcaaagatgagtttaccaccttcttccatcacacgttctctacagaa 39204209  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  39204208 attgaaccactgcccacccaagtatttttcatagcttgctctttcggcggcaatgaggcgacacttata 39204140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 77 - 226
Target Start/End: Complemental strand, 39444687 - 39444535
Alignment:
Q  77 aactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattgaaccactg-cca 173  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||   |||||||||||||| |||    
T  39444687 aactcgaacgtgcaagttcttcagtgacttttcgagatcaaagatgagcttaccaccttcttccatgacacgttctctgcagaaattgaaccactgccca 39444588  T
Q  174 cccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
     |||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  39444587 tccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttata 39444535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 52 - 226
Target Start/End: Original strand, 23626645 - 23626822
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||| || || ||||||||    
T  23626645 cagcagcaaagatctattttggaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaaagatgagcttatcaccttcttctatgacacgttc 23626744  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   |||||||||||||| ||  |||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  23626745 tctgcagaaattgaaccactgcccttccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttata 23626822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 52 - 226
Target Start/End: Complemental strand, 29433725 - 29433548
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||| || || |||||  |||||||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  29433725 cagcagcaaagatctactttggaacaactcgaacgtggaaattcttcggtgacttttccagatcaaagatgagcttaccaccttcttccattacacgttc 29433626  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    | ||   ||||||||||| || |||||||||||||||||||||||  ||||||||| ||||||||| |||||||||||    
T  29433625 tctgcagaaattgaaccattgcccacccaagtatttttcatagctcgctctttcggtggtaatgaggcgacacttata 29433548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 6300929 - 6301095
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  6300929 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 6301028  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  6301029 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 6301095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 23966832 - 23966998
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  23966832 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 23966931  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  23966932 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 23966998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 37029513 - 37029347
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  37029513 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcagaaat 37029414  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  37029413 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 37029347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 44940117 - 44939951
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| ||   ||||    
T  44940117 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgtagaaat 44940018  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  44940017 tgatccatagcccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 44939951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 33424568 - 33424744
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgt--tctttgaaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||| ||| |||||||| |||  ||| |  ||    
T  33424568 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccactttcttccatcactcgttatctgtagaa 33424667  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||| ||| | ||||||||||| |||||||||||| |||| ||||||||||||| | |||| ||||| |||||||    
T  33424668 attgaatcaccgcccacccaagtaattttcatagcttgctctatcggcggtaatgatatgacagttatactgtctct 33424744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 22333435 - 22333587
Alignment:
Q  65 ctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattg 162  Q
    ||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||| ||||||||||  |||||||| |||| | ||   ||||||    
T  22333435 ctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagtttaccacctttttccatcactcgttatctgcagaaattg 22333534  T
Q  163 aaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    |||||||| ||||||||||| |||||||||||| |||| ||||||||||||||    
T  22333535 aaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgag 22333587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 61 - 237
Target Start/End: Complemental strand, 41628568 - 41628389
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgt--tctttgaaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  |||||||||||||||||| |||||||||||||||||| |||||| | |||  |||    ||    
T  41628568 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaggatgagcttaccaccttcttccatctctcgtaatctgcagaa 41628469  T
Q  159 attgaaccact-gccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctctctg 237  Q
    |||||||||||  ||||||||||| |||||||||||| |||| ||||||||||||||  |||| |||||  |||||||||    
T  41628468 attgaaccactacccacccaagtaattttcatagcttgctctatcggcggtaatgaggtgacagttataccgtctctctg 41628389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 42061106 - 42061272
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa--aat 160  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||||||||   ||||||||||||| || |   ||    
T  42061106 atctactttagaacaactcgaacgtgcaagttcttcggtgacttttcgagaccaaatatgagcttaccaccttctatcatcacacgttctctgcatttat 42061205  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||| |||  | |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||    
T  42061206 tgatccatagcccacccaagtatttttcatagcttgctctttcggcgataatgaggcgacacttata 42061272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 42811246 - 42811421
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg-aaaa 159  Q
    ||||||||||||||||||||| ||  |||||||||||  |||||||||||| |||||||||||| ||||||||||| |||||||| |||| | ||  |||    
T  42811246 agatctactttggaacaactcaaatttgcaagttcttctgtgacttttcgatatcaaagatgagtttaccaccttcttccatcactcgttatctgcgaaa 42811345  T
Q  160 ttgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||||||||| |||| |||||| |||||||||||| ||||  ||||| |||||||  |||| |||||||||||||    
T  42811346 ttgaaccactgcccacgcaagtaattttcatagcttgctctaacggcgataatgaggtgacaattatattgtctct 42811421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 237
Target Start/End: Complemental strand, 38961852 - 38961673
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  ||||||| |||  ||||||||||||||||||||||||| | ||||||||| |||||||| |||| | ||   ||    
T  38961852 agatctactttggaacaactcgaatttgcaagtacttatgtgacttttcgagatcaaagatgagatcaccaccttcttccatcactcgttatctgcataa 38961753  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctctctg 237  Q
    |||||||||||| ||||||||||| ||||||||| || |||| ||  ||||||| ||  |||| ||||| ||||||||||    
T  38961752 attgaaccactgcccacccaagtaattttcatagtttgctctatcaacggtaataaggtgacagttatactgtctctctg 38961673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 237
Target Start/End: Complemental strand, 38992196 - 38992017
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  ||||||| |||  ||||||||||||||||||||||||| | ||||||||| |||||||| |||| | ||   ||    
T  38992196 agatctactttggaacaactcgaatttgcaagtacttatgtgacttttcgagatcaaagatgagatcaccaccttcttccatcactcgttatctgcataa 38992097  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctctctg 237  Q
    |||||||||||| ||||||||||| ||||||||| || |||| ||  ||||||| ||  |||| ||||| ||||||||||    
T  38992096 attgaaccactgcccacccaagtaattttcatagtttgctctatcaacggtaataaggtgacagttatactgtctctctg 38992017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 19395873 - 19396014
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||  |||| ||||   ||    
T  19395873 agatctactttggaacaactcgaatttgcaagttcttctgtgacttttcgagatcaaagatgagcttaccaccttcttccatcattcgttatttgtagaa 19395972  T
Q  159 attgaaccact-gccacccaagtatttttcatagctttctct 199  Q
    |||||||||||  ||||| ||| | |||||||||||| ||||    
T  19395973 attgaaccactccccaccaaagaaattttcatagcttgctct 19396014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 23522952 - 23523048
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttgaa 157  Q
    ||||||||||||||||| ||||||  |||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||| |||| ||||||    
T  23522952 agatctactttggaacagctcgaatttgcaagttcttctgtgacttttcgagatcaaatatgagcttaccaccttcttccatcactcgttatttgaa 23523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 6477828 - 6477978
Alignment:
Q  87 tgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattgaaccactg-ccacccaagtatt 183  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||  |||||||| |||| | ||   |||||||||||||| ||| |||| || |    
T  6477828 tgcaagttcttctgtgacttttcgagatcaaagatgagcttaccacctttttccatcactcgttatctgcagaaattgaaccactgcccatccaaataat 6477927  T
Q  184 tttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    ||||||||||| || | |||| |||||||||| |||| ||||  |||||||    
T  6477928 tttcatagcttgctttatcggtggtaatgagatgacagttatgctgtctct 6477978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 44383308 - 44383426
Alignment:
Q  119 gatgagcttaccaccttcgtccatcacacgttctttgaa--aattgaaccactgc-cacccaagtatttttcatagctttctctttcggcggtaatgaga 215  Q
    |||||||||||||||||| ||||||||||||| |||| |  ||||||||| | |  ||||||||||||||||||| ||||||||||||||||||||||      
T  44383308 gatgagcttaccaccttcttccatcacacgttttttgcagaaattgaacccccgttcacccaagtatttttcatatctttctctttcggcggtaatgaag 44383407  T
Q  216 cgacacttatattgtctct 234  Q
    |||||||||| || |||||    
T  44383408 cgacacttattttttctct 44383426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 22947104 - 22947168
Alignment:
Q  53 agcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaa 117  Q
    ||||||| ||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||    
T  22947104 agcaccaaagatctacttttgaacaactcgaacgtgcaagttcttcggtgacttttcgagatcaa 22947168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 61 - 226
Target Start/End: Complemental strand, 49982 - 49814
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||| ||||||||||||| |||||||||||   | |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||   ||    
T  49982 agatctacttttgaacaactcgaacgtgcaagttcttcgattacttttcgagatcaaagatgagcttaccaccttcttccatcacatgttctctgctgaa 49883  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  49882 attgaaccactgtccacccaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 49814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 226
Target Start/End: Original strand, 30319 - 30487
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| ||   ||    
T  30319 agatctactttggaacaactcaaacatgcaagttctttggtgacttttcaagatcaaagatgagcttatcaccttcttccatcacacgttctctgcagaa 30418  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||| ||||| ||| |||||||||||||||||||| |||||| ||||||||||||  ||||||||||    
T  30419 attgaatcactgcccatccaagtatttttcatagcttgctcttttggcggtaatgaggtgacacttata 30487  T

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Target: scaffold0010 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 119968 - 119805
Alignment:
Q  66 tactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattga 163  Q
    |||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||   |||||||    
T  119968 tactttggaacaactcgaatgtgcaagttcttcggtgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttctctgcagaaattga 119869  T
Q  164 accactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||||||| ||||||||| |||||||||||||| ||||||| |||||||||||  ||||||||||    
T  119868 accactgcccacccaagcatttttcatagcttgctctttctgcggtaatgaggtgacacttata 119805  T

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Target: scaffold0006 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 61 - 226
Target Start/End: Original strand, 64956 - 65125
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttcttt---gaa 157  Q
    ||||||| |||||| |||||| ||| |||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||||||| | |   |||    
T  64956 agatctattttggatcaactcaaacgtgcaagttcttcgatgacttttcgagatcaaagatgagcttaccaccttcttccatcacacgttttctgcagaa 65055  T
Q  158 aattgaaccactgcc-acccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    ||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  65056 aattgaaccactgccaaccaaagtatttttcatagcttgctctttcggcggtaatgaggcgacacttata 65125  T

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Target: scaffold0006; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 152485 - 152644
Alignment:
Q  69 tttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaattgaacc 166  Q
    ||||||||| ||||||| |||||||||||   | |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||   ||||| ||||    
T  152485 tttggaacagctcgaacgtgcaagttcttcgataacttttcgagatcaaagatgagtttaccaccttcttccatcacacgttctctgcagaaattaaacc 152584  T
Q  167 actgccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
    |||||  ||| ||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  152585 actgcgcccctagtatttttcatagcttgctctttcggaggtaatgaggcgacacttata 152644  T

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Target: scaffold0122 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 351 - 175
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaa 158  Q
    |||||||||||| |||||||||||  | |||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||   ||    
T  351 agatctactttgaaacaactcgaattttcaagttcttatgtgacttttcgagatcaaagatgagcttaccaccttcttccatcactcgttatctgcagaa 252  T
Q  159 attgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||| |||| |||||||||||||    
T  251 attgaaccactgcccacccaagtaattttcatagcttgctctatcggcggtaatgagatgacagttatattgtctct 175  T

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Target: scaffold0038 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 52 - 214
Target Start/End: Original strand, 29330 - 29495
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttc 151  Q
    ||||| || ||||||||||||||||||||||||| |  ||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  29330 cagcaacaaagatctactttggaacaactcgaacgtataagttcttcggtgacttttcgagatcaaagatgagcttatcaccttcttccatcacacgttc 29429  T
Q  152 tttg--aaaattgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgag 214  Q
    | ||   ||||||||| | || |||||||||||||||||||||||||||||||||| |||||||||    
T  29430 tctgcagaaattgaactattgtccacccaagtatttttcatagctttctctttcggtggtaatgag 29495  T

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Target: scaffold0047 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 234
Target Start/End: Original strand, 26684 - 26858
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||||||  ||||||| |||| | ||   ||||    
T  26684 atctactttggaacaactcgaacttgcaagttcttctgtgactttttgagatcaaagatgagcttaccaccttctcccatcactcgttatctgcagaaat 26783  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||| ||||||||||| |||||||||||| |||| |||||| |||||||| |||| ||||| |||||||    
T  26784 tgaaccactgcccacccaagtaattttcatagcttgctctatcggcgataatgagatgacaattatactgtctct 26858  T

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Target: scaffold0005 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 234
Target Start/End: Complemental strand, 9859 - 9685
Alignment:
Q  63 atctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttctttg--aaaat 160  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||||||  ||||||| |||| | ||   ||||    
T  9859 atctactttggaacaactcgaacttgcaagttcttctgtgactttttgagatcaaagatgagcttaccaccttctcccatcactcgttatctgcagaaat 9760  T
Q  161 tgaaccactg-ccacccaagtatttttcatagctttctctttcggcggtaatgagacgacacttatattgtctct 234  Q
    |||||||||| ||||||||||| |||||||||||| |||| |||||| |||||||| |||| ||||| |||||||    
T  9759 tgaaccactgcccacccaagtaattttcatagcttgctctatcggcgataatgagatgacagttatactgtctct 9685  T

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Target: scaffold0095 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 77 - 226
Target Start/End: Complemental strand, 1256 - 1104
Alignment:
Q  77 aactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcacacgttcttt--gaaaattgaaccactg-cca 173  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| |    |||||||||||||| |||    
T  1256 aactcgaacgtgcaagttcttcagtgacttttcgagatcaaagatgagtttaccaccttcttccatgacacgttctctacagaaattgaaccactgccca 1157  T
Q  174 cccaagtatttttcatagctttctctttcggcggtaatgagacgacacttata 226  Q
     |||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  1156 tccaagtatttttcatagcatgctctttcggcggtaatgaggcgacacttata 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 4501 - 4586
Alignment:
Q  61 agatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagatgagcttaccaccttcgtccatcaca 146  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||| |||||||||    
T  4501 agatctactttggaacaactcgaacatgcaagttcttcggtgacttttcgaaatcaaagatgagcttaccaccttcttccatcaca 4586  T

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Target: scaffold0079 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 10923 - 10992
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttctttagtgacttttcgagatcaaagat 121  Q
    ||||| || |||||||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||    
T  10923 cagcagcaaagatctactttggaacaactcgaatatgtaagttcttcggtgacttttcgagatcaaagat 10992  T

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Target: scaffold0088 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 53301 - 53348
Alignment:
Q  77 aactcgaacatgcaagttctttagtgacttttcgagatcaaagatgag 124  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  53301 aactcgaacgtgcaagttcttcagtgacttttcgagatcaaagatgag 53348  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 100542 - 100496
Alignment:
Q  52 cagcaccacagatctactttggaacaactcgaacatgcaagttcttt 98  Q
    ||||| || |||||||||||  |||||||||||||||||||||||||    
T  100542 cagcagcaaagatctactttcaaacaactcgaacatgcaagttcttt 100496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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