View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1283_low_6 (Length: 513)
Name: NF1283_low_6
Description: NF1283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1283_low_6 |
 | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 400; Significance: 0; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 9 - 440
Target Start/End: Original strand, 27878622 - 27879053
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccag |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
27878622 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaggggctctgataccactgttaggtaccag |
27878721 |
T |
|
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
208 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878722 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
27878821 |
T |
|
| Q |
209 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaat |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27878822 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaat |
27878921 |
T |
|
| Q |
309 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattctactatgaacaagta |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
27878922 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctctctattctactaagaacaagta |
27879021 |
T |
|
| Q |
409 |
gttgttgtgttactttgttctggtgtagttac |
440 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |
|
|
| T |
27879022 |
gttgttgtgttactttgttctggtgttgttac |
27879053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 96 - 391
Target Start/End: Complemental strand, 1235018 - 1234725
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1235018 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
1234919 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccact |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
1234918 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
1234819 |
T |
|
| Q |
296 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
1234818 |
ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat |
1234725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 96 - 391
Target Start/End: Original strand, 26976131 - 26976424
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976131 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
26976230 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccact |
295 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
26976231 |
aataaggggaaaaaaccaaggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact |
26976330 |
T |
|
| Q |
296 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
26976331 |
ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat |
26976424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 96 - 391
Target Start/End: Original strand, 27873990 - 27874283
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27873990 |
tgttaggtaccagagtaacaaaatattatcacgcatctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
27874089 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccact |
295 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
27874090 |
aataaagggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
27874189 |
T |
|
| Q |
296 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||| ||| |||| |||||||||||||| |||||||||| |
|
|
| T |
27874190 |
ctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacaggagaagctatttttcctctctatattttttctctcactat |
27874283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 96 - 389
Target Start/End: Complemental strand, 18968194 - 18967912
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
18968194 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaatacataatattttacgtggaaacccctcaaca |
18968095 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaactacaaggagagtataattaccac |
294 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| ||||||||| ||||||||||| ||||| | | |
|
|
| T |
18968094 |
aataaggggaaaaaaccacggggcaagagtagaaaactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattagc-c |
18967996 |
T |
|
| Q |
295 |
tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcact |
389 |
Q |
| |
|
|||||| | |||||||||||||| |||| ||||||||||||||||| ||||||||| ||| |||| |||||||||||||||||| |
|
|
| T |
18967995 |
tctctcat-gaaataggagaatactaaca----------ctaggagaaacctcacaagagaaactatatttcctctttatatttttcctctcact |
18967912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 95 - 373
Target Start/End: Complemental strand, 30986830 - 30986552
Alignment:
| Q |
95 |
ctgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaa---cccctc |
191 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||| |
|
|
| T |
30986830 |
ctgttaggtatcagagtaacaaaatattatcacgtagctaaaataagagacgagaaaagaggaactgaacgcacaatattt-acgtggaaagtacccctc |
30986732 |
T |
|
| Q |
192 |
aacaaataaggggaaaaaa--ccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataatt |
289 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||| |
|
|
| T |
30986731 |
aacaaataaggaaaaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattgcaggacctctctctaaatgcaaggagagtacaatt |
30986632 |
T |
|
| Q |
290 |
accactctctcttataaataggagaatacaaacactaacactacctaggagaaacctca-caggagaaactaatt-tttctctcta |
373 |
Q |
| |
|
||||||||||||| ||||||| ||||| ||| |||||||||||||||||||||| ||||||||||| || |||||||||| |
|
|
| T |
30986631 |
accactctctcttgtaaatagaagaat------actgacactacctaggagaaacctcatgaggagaaactatttctttctctcta |
30986552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 142 - 386
Target Start/End: Complemental strand, 30966923 - 30966683
Alignment:
| Q |
142 |
agacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa-aaaaccacggggcaagagtagagaactttcacta |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
30966923 |
agacgagaaaagaggaactgaacacacaatattt-acgtggaaacccatcaacaaataagggaaataaaatcacggggcaagagtagagaactttcacta |
30966825 |
T |
|
| Q |
241 |
agtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaataggagaatacaaacactaacactacctaggag |
340 |
Q |
| |
|
||||||||||||| ||| |||||||||||| | ||||||||||| ||||||||||||||||| ||||||| ||||| ||| | ||||||||||| |
|
|
| T |
30966824 |
agtggaagaaattgcagaacctctctctaaatgcaaggagagtacaattaccactctctcttgtaaatagaagaat------actgaggctacctaggag |
30966731 |
T |
|
| Q |
341 |
aaacctcac-aggagaaactaatt-tttctctctatatttttcctctc |
386 |
Q |
| |
|
||||||||| || |||||||| || ||||||||||||||||| ||||| |
|
|
| T |
30966730 |
aaacctcacaagtagaaactatttctttctctctatattttttctctc |
30966683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 30967812 - 30967674
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccag |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
30967812 |
accacagagcatactaagatttttcttaccacaccactagtttatcgcagcggaataacagctacgaactaaaggctctgataccactgttaggtaccag |
30967713 |
T |
|
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacga |
147 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||| |
|
|
| T |
30967712 |
agtaacaaaatattatcaagcagctaaaataagagacga |
30967674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 101 - 284
Target Start/End: Complemental strand, 21966860 - 21966680
Alignment:
| Q |
101 |
ggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
200 |
Q |
| |
|
||||||| |||||| ||| |||||||| || ||||| ||| | | ||||||||||||||| |||| | ||||||| | ||||||||||||||| |||||| |
|
|
| T |
21966860 |
ggtaccaaagtaacgaaacattatcacgcagctaaa-taacatatgagaaaagaggaactaaacataaaatattt-atgtggaaacccctcaataaataa |
21966763 |
T |
|
| Q |
201 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagta |
284 |
Q |
| |
|
|||||||| | | ||||||||||||||||||||||||||| |||||||||||| | ||||||||||||| | ||| ||||||| |
|
|
| T |
21966762 |
agggaaaaatc-atggggcaagagtagagaactttcactaaatggaagaaattataagacctctctctaatttcaaagagagta |
21966680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 9 - 264
Target Start/End: Original strand, 23012413 - 23012667
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccag |
108 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||| |||| |||| | | |||| |||| |||||| |||| ||||| || || |||| |||| || |
|
|
| T |
23012413 |
accacaaagcatactaagttttttcttaccactgcacttgtttgttgatgtggaacaacaactacgagccaatggctcaaatgacattgttgggtaacaa |
23012512 |
T |
|
| Q |
109 |
agtaacaaaa-tattatcacacaactaaaataagagacgag-aaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa |
206 |
Q |
| |
|
||||| |||| ||||||||| |||||||||||||||||||| |||||| ||| |||||||||| || ||||||||||||| | || |||||| | ||| | |
|
|
| T |
23012513 |
agtaaaaaaaatattatcacgcaactaaaataagagacgagaaaaagaagaattgaacacacatta-tttacgtggaaactcgtc-acaaattaagggga |
23012610 |
T |
|
| Q |
207 |
aaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctct |
264 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| ||||||| || ||||||| |
|
|
| T |
23012611 |
aaaacca-tgggcaagagtagagaactttcactaagtgagagaaatttcaagacctct |
23012667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 368; Significance: 0; HSPs: 16)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 9 - 440
Target Start/End: Original strand, 30950096 - 30950526
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccag |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
30950096 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaggagctctgataccactgttaggtaccag |
30950195 |
T |
|
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
208 |
Q |
| |
|
||||||||||||||||||| || ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
30950196 |
agtaacaaaatattatcacgcagctaaaataagataagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg-aaaa |
30950294 |
T |
|
| Q |
209 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaat |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
30950295 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggaaagtacaattaccactctctcttataaat |
30950394 |
T |
|
| Q |
309 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattctactatgaacaagta |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
30950395 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctctctattctactaagaacaagta |
30950494 |
T |
|
| Q |
409 |
gttgttgtgttactttgttctggtgtagttac |
440 |
Q |
| |
|
||||||||||||||||||| |||||| ||||| |
|
|
| T |
30950495 |
gttgttgtgttactttgttatggtgttgttac |
30950526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 9 - 391
Target Start/End: Original strand, 48701734 - 48702114
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccag |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
48701734 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccagcggctctgataccactgttaggtaccag |
48701833 |
T |
|
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
208 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701834 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
48701933 |
T |
|
| Q |
209 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaat |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
48701934 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaat |
48702033 |
T |
|
| Q |
309 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
|||||||||| | |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
48702034 |
aggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat |
48702114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 9 - 391
Target Start/End: Complemental strand, 42266307 - 42265927
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccag |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
42266307 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccagcggctctgataccactgttagataccag |
42266208 |
T |
|
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
208 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266207 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
42266108 |
T |
|
| Q |
209 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaat |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
42266107 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaat |
42266008 |
T |
|
| Q |
309 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
|||||||||||| |||||||| | ||||||||||||||||||||||| ||| |||| |||||||||||||| |||||||||| |
|
|
| T |
42266007 |
aggagaatacaa--actaacacaaactaggagaaacctcacaggagaagctatttttcctctctatattttttctctcactat |
42265927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 95 - 440
Target Start/End: Original strand, 30945476 - 30945820
Alignment:
| Q |
95 |
ctgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
194 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945476 |
ctgttaggtatcagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
30945575 |
T |
|
| Q |
195 |
aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccac |
294 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
30945576 |
aaataaggg-aaaaaatcacggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggagagtacaattaccac |
30945674 |
T |
|
| Q |
295 |
tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattct |
394 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30945675 |
tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctctctattct |
30945774 |
T |
|
| Q |
395 |
actatgaacaagtagttgttgtgttactttgttctggtgtagttac |
440 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30945775 |
actaagaacaagtagttgttgtgttactttgttctggtgttgttac |
30945820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 102 - 391
Target Start/End: Original strand, 24520031 - 24520318
Alignment:
| Q |
102 |
gtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataag |
201 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520031 |
gtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataag |
24520130 |
T |
|
| Q |
202 |
gggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctct |
301 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
24520131 |
gggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctct |
24520230 |
T |
|
| Q |
302 |
tataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
24520231 |
tataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat |
24520318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 94 - 391
Target Start/End: Complemental strand, 42270941 - 42270646
Alignment:
| Q |
94 |
actgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaa |
193 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270941 |
actgttagataccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaa |
42270842 |
T |
|
| Q |
194 |
caaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattacca |
293 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
42270841 |
caaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattacca |
42270742 |
T |
|
| Q |
294 |
ctctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||| ||| |||| |||||||||||||| |||||||||| |
|
|
| T |
42270741 |
ctctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacaggagaagctatttttcctctctatattttttctctcactat |
42270646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 96 - 391
Target Start/End: Original strand, 48697131 - 48697425
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697131 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
48697230 |
T |
|
| Q |
196 |
aataaggggaaaa-aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccac |
294 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
48697231 |
aataaggggaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccac |
48697330 |
T |
|
| Q |
295 |
tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
48697331 |
tctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat |
48697425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 96 - 389
Target Start/End: Complemental strand, 10427597 - 10427315
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10427597 |
tgttaggtaccagagtaacagaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgcggaaacccctcaaca |
10427498 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaactacaaggagagtataattaccac |
294 |
Q |
| |
|
|||||||||||||||| |||||| || |||||| |||||||||||||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||| | |
|
|
| T |
10427497 |
aataaggggaaaaaactacggggaaaaagtagataactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattacc-c |
10427399 |
T |
|
| Q |
295 |
tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcact |
389 |
Q |
| |
|
|||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
10427398 |
tctctctt-gaaataggagaatactaaca----------ctaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
10427315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 109 - 304
Target Start/End: Complemental strand, 48783031 - 48782850
Alignment:
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
208 |
Q |
| |
|
|||| |||||||||||||| | | |||||||||| ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||||| |
|
|
| T |
48783031 |
agtatcaaaatattatcacgcgattaaaataagaaacgagaaaacaggaactgaacacacaata-tttacgtggaaatttctcaacaaataaagggaaaa |
48782933 |
T |
|
| Q |
209 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttat |
304 |
Q |
| |
|
| || ||| |||||||||||||||||||||||||||| | ||||||||||||| |||| | ||||| ||||||||||||||||||| |
|
|
| T |
48782932 |
a--catggg---------gagaactttcactaagtggaagaaattagatgacctctctctaaatacatg--gagtacaattaccactctctcttat |
48782850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 220 - 328
Target Start/End: Complemental strand, 1979375 - 1979269
Alignment:
| Q |
220 |
aagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaataggagaataca |
319 |
Q |
| |
|
||||||||| |||||||| |||| ||||||||||||| ||||||||| || | ||||||| ||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
1979375 |
aagagtagataactttcagtaagaggaagaaattacacgacctctct--aaatgcaaggagggtatatttaccactctctcttataaacaggagaatact |
1979278 |
T |
|
| Q |
320 |
aacactaac |
328 |
Q |
| |
|
| ||||||| |
|
|
| T |
1979277 |
agcactaac |
1979269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 17248112 - 17248015
Alignment:
| Q |
149 |
aaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaa |
247 |
Q |
| |
|
||||||| |||| || ||||||||||| || |||||| |||| || |||||||||||||||||||| || ||||||| |||||||||| ||||||||| |
|
|
| T |
17248112 |
aaaagagaaactaaatacacaatattt-acatggaaatcccttaataaataaggggaaaaaaccaccggataagagtatagaactttcattaagtggaa |
17248015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 30165968 - 30165900
Alignment:
| Q |
107 |
agagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattt |
175 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| | ||||||| | ||| |||||||| ||||||| |
|
|
| T |
30165968 |
agagtaacaaaataatatcacacaactaaaataagatatgagaaaaaatgaattgaacacataatattt |
30165900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 21515462 - 21515516
Alignment:
| Q |
83 |
gctctgataccactgttaggtaccagagtaacaaaatattatcacacaactaaaa |
137 |
Q |
| |
|
|||||||||||| |||| |||| |||||||||||| |||| |||||||||||||| |
|
|
| T |
21515462 |
gctctgataccattgttgggtatcagagtaacaaagtattttcacacaactaaaa |
21515516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 36615361 - 36615438
Alignment:
| Q |
98 |
ttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattt |
175 |
Q |
| |
|
|||||||| ||||||| ||||||||||| |||| |||||||||| | |||||||||| ||| ||||| ||| ||||| |
|
|
| T |
36615361 |
ttaggtactagagtaataaaatattatcgcacagttaaaataagatatgagaaaagagaaaccgaacatacattattt |
36615438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 1979604 - 1979567
Alignment:
| Q |
162 |
aacacacaatattttacgtggaaacccctcaacaaataa |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1979604 |
aacacacaatattt-acgtggaaacccctcaacaaataa |
1979567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 1999230 - 1999189
Alignment:
| Q |
75 |
aaccaagggctctgataccactgttaggtaccagagtaacaa |
116 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||| |||||| |
|
|
| T |
1999230 |
aaccaagtgctctgataccactgttaggtatcagaataacaa |
1999189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 328; Significance: 0; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 9 - 391
Target Start/End: Original strand, 5823188 - 5823568
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccag |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
5823188 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccagcggctctgataccactgttaggtaccag |
5823287 |
T |
|
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
208 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823288 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
5823387 |
T |
|
| Q |
209 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaat |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5823388 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaat |
5823487 |
T |
|
| Q |
309 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
|||||||||| | |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
5823488 |
aggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat |
5823568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 96 - 430
Target Start/End: Complemental strand, 54546200 - 54545867
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
54546200 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagatgagaaaagaggaactgaacatacaatattt-acgtggaaacccctcaaca |
54546102 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccact |
295 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
54546101 |
aataaggggaaaaaaccacggggctagagtagagaactttcactaagtggatgaaattacaggacctctctctaactacaaggagagtacaattaccact |
54546002 |
T |
|
| Q |
296 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattcta |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54546001 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattcta |
54545902 |
T |
|
| Q |
396 |
ctatgaacaagtagttgttgtgttactttgttctg |
430 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| |
|
|
| T |
54545901 |
ctaagaacaagtagttgttgtgttactttgttctg |
54545867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 96 - 391
Target Start/End: Original strand, 5818513 - 5818806
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818513 |
tgttaggtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaact |
5818612 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccact |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5818613 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact |
5818712 |
T |
|
| Q |
296 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
5818713 |
ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat |
5818806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 9 - 318
Target Start/End: Original strand, 2817176 - 2817486
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccag |
108 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |||||||||||| || ||||||||||| |||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
2817176 |
accacatagcatactaagatttttcttaccacaccactagtttattactgcggaataacaactacgaaccagcggctttgataccactgttaggtaccag |
2817275 |
T |
|
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
208 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2817276 |
agtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa-gggaaaa |
2817374 |
T |
|
| Q |
209 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattacca--ctctctcttataa |
306 |
Q |
| |
|
|||||| ||||||||||| |||||| |||||||||||||||||||||| || |||||||||| ||||||||||||| ||| |||| ||||||||||||| |
|
|
| T |
2817375 |
aaccacagggcaagagtaaagaactctcactaagtggaagaaattacaagaactctctctaaatacaaggagagtacaatcaccactctctctcttataa |
2817474 |
T |
|
| Q |
307 |
ataggagaatac |
318 |
Q |
| |
|
|||||||||||| |
|
|
| T |
2817475 |
ataggagaatac |
2817486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 96 - 249
Target Start/End: Original strand, 24659136 - 24659287
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
24659136 |
tgttaggtaccagagtaataaaatattatcacacagctaaaataagagatgagaaaagaggaactgaacacacaacattttacgtggaaacccctcaaca |
24659235 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga |
249 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
24659236 |
aataaggggaaaaaaccacggggcaagagt--agaactttcactaagtggaaga |
24659287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 4579360 - 4579254
Alignment:
| Q |
104 |
accagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg |
203 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4579360 |
accagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg |
4579261 |
T |
|
| Q |
204 |
gaaaaaa |
210 |
Q |
| |
|
||||||| |
|
|
| T |
4579260 |
gaaaaaa |
4579254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 110 - 266
Target Start/End: Original strand, 31204781 - 31204936
Alignment:
| Q |
110 |
gtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaa |
209 |
Q |
| |
|
|||||||||||||| ||| || ||||| |||||| || |||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
31204781 |
gtaacaaaatattagcacgcagttaaaagaagagatga-aaaagaggaactgaactcacaatattt-acgtggaaacccctcaacaaataagaggaaaaa |
31204878 |
T |
|
| Q |
210 |
accacgg-ggcaagagtagagaactttcactaagtggaagaaattacaggacctctct |
266 |
Q |
| |
|
| ||||| ||||| ||||||||||||||||||||||| | |||||||| |||||||| |
|
|
| T |
31204879 |
atcacggaggcaatagtagagaactttcactaagtgggaaaaattacaaaacctctct |
31204936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 249 - 389
Target Start/End: Original strand, 24671173 - 24671301
Alignment:
| Q |
249 |
aaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaataggagaatacaaacactaacactacctaggagaaacctca |
348 |
Q |
| |
|
|||||||| ||| ||||||||| ||||||||||| ||||||| ||||||||| |||||||||||||| ||||||| |||||||||||| |
|
|
| T |
24671173 |
aaattacaagacttctctctaaatacaaggagagacaaattacc-ctctctcttg-aaataggagaatactaacacta----------ggagaaacctca |
24671260 |
T |
|
| Q |
349 |
caggagaaactaatttttctctctatatttttcctctcact |
389 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
24671261 |
caggagaaactatatttcctctctatatttttcctctcact |
24671301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 25877142 - 25877086
Alignment:
| Q |
84 |
ctctgataccactgttaggtaccagagtaacaaaatattatcacacaactaaaataa |
140 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||| || |||||||||||| |
|
|
| T |
25877142 |
ctctgataccactgttaggtaccagaataacataatattattacgcaactaaaataa |
25877086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 4579177 - 4579126
Alignment:
| Q |
338 |
gagaaacctcacaggagaaactaatttttctctctatatttttcctctcact |
389 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
4579177 |
gagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
4579126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 291
Target Start/End: Complemental strand, 35977258 - 35977103
Alignment:
| Q |
134 |
aaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtaga-gaac |
232 |
Q |
| |
|
|||||||||| |||||||||| || |||||| ||||||||| |||| ||| || |||||| ||| |||||||| ||| |||||||||| | || |
|
|
| T |
35977258 |
aaaataagaggtgagaaaagagaaattgaacaaacaatattt-acgtaaaaaaccatcaacatata--gggaaaaactcacttggcaagagtaaaagagt |
35977162 |
T |
|
| Q |
233 |
tttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattac |
291 |
Q |
| |
|
||||||||||||||| |||||||| ||| ||||||||| ||||||||||| | |||||| |
|
|
| T |
35977161 |
tttcactaagtggaaaaaattacaagacttctctctaaatacaaggagagaacaattac |
35977103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 324; Significance: 0; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 9 - 391
Target Start/End: Original strand, 9444005 - 9444385
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccag |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9444005 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccagcggctctgataccactgttaggtaccag |
9444104 |
T |
|
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
208 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444105 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
9444204 |
T |
|
| Q |
209 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaat |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
9444205 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaat |
9444304 |
T |
|
| Q |
309 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
|||||||||| | |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
9444305 |
aggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat |
9444385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 96 - 391
Target Start/End: Original strand, 9439372 - 9439665
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439372 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
9439471 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccact |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
9439472 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
9439571 |
T |
|
| Q |
296 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
9439572 |
ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat |
9439665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 4799371 - 4799315
Alignment:
| Q |
113 |
acaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacaca |
169 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||||||| || |||||||||| |
|
|
| T |
4799371 |
acaaaatattatcacactgctaaaataagagatgagaaaagagaaattgaacacaca |
4799315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 324; Significance: 0; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 9 - 391
Target Start/End: Complemental strand, 41718814 - 41718434
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccag |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
41718814 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccagcggctctgataccactgttaggtaccag |
41718715 |
T |
|
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
208 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718714 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
41718615 |
T |
|
| Q |
209 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaat |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
41718614 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaat |
41718515 |
T |
|
| Q |
309 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
|||||||||| | |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
41718514 |
aggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat |
41718434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 96 - 391
Target Start/End: Complemental strand, 34360273 - 34359980
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34360273 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtagaaacccctcaaca |
34360174 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccact |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
34360173 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact |
34360074 |
T |
|
| Q |
296 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
34360073 |
ctctcttataaataggagaatacta--actaacacaaactaggagaaatctcacaggagaaactaatttttctctctatattttttctctcactat |
34359980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 96 - 395
Target Start/End: Original strand, 29585300 - 29585597
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585300 |
tgttaggtatcagagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
29585399 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccact |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
29585400 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaagagagtacaattaccact |
29585499 |
T |
|
| Q |
296 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattcta |
395 |
Q |
| |
|
||||||||||||||||||||||| | ||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
29585500 |
ctctcttataaataggagaatacta--actaatacaaactaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactactcta |
29585597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 96 - 391
Target Start/End: Complemental strand, 41723453 - 41723160
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723453 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
41723354 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccact |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
41723353 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
41723254 |
T |
|
| Q |
296 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
41723253 |
ctctcttataaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat |
41723160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 115 - 391
Target Start/End: Complemental strand, 34352546 - 34352272
Alignment:
| Q |
115 |
aaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccac |
214 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352546 |
aaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccac |
34352447 |
T |
|
| Q |
215 |
ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaataggaga |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
34352446 |
ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggaga |
34352347 |
T |
|
| Q |
315 |
atacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
|||| | |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
34352346 |
atacta--actaacacaaactaggagaaatctcacaggagaaactaatttttctctctatattttttctctcactat |
34352272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 23319392 - 23319458
Alignment:
| Q |
72 |
acgaaccaagggctctgataccactgttaggtaccagagtaacaaaatattatcacacaactaaaataa |
140 |
Q |
| |
|
||||||||| |||||||||||||||||||||| || | |||| |||||||| ||||||||||||||| |
|
|
| T |
23319392 |
acgaaccaaaagctctgataccactgttaggtatcataataac--aatattattacacaactaaaataa |
23319458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 14)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 105 - 391
Target Start/End: Original strand, 5198664 - 5198948
Alignment:
| Q |
105 |
ccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggg |
204 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198664 |
ccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggg |
5198763 |
T |
|
| Q |
205 |
aaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttat |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
5198764 |
aaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttat |
5198863 |
T |
|
| Q |
305 |
aaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
391 |
Q |
| |
|
|||||||||||||| | |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
5198864 |
aaataggagaatacta--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactat |
5198948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 9 - 259
Target Start/End: Complemental strand, 825883 - 825632
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccag |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
825883 |
accacagagcatactaagatttttcttaccacttcactagtttatcacagcggaataacagctacgaaccagcggctctgataccactgttaggtaccag |
825784 |
T |
|
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa-a |
207 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
825783 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccactcaacaaataaggggaaaa |
825684 |
T |
|
| Q |
208 |
aaaccacggggcaagagtagagaactttcactaagtggaagaaattacagga |
259 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
825683 |
aaaccacggggcaagagtagagaactttcactaagtggaagaaattacagga |
825632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 387
Target Start/End: Complemental strand, 15603272 - 15602905
Alignment:
| Q |
18 |
catactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccagagtaacaaa |
117 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||| | || |||||||||| |||||||||| | |||||||| ||||||| ||| ||||||| ||| |
|
|
| T |
15603272 |
catactaagatatttcttaccactccaccagttttttgcatcggaataacaattacgaaccaatgactctgatagcactgttgggtgtgagagtaagaaa |
15603173 |
T |
|
| Q |
118 |
atattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggg |
217 |
Q |
| |
|
|||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15603172 |
atattatcacgcaattgaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggg |
15603073 |
T |
|
| Q |
218 |
gcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaataggagaata |
317 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| ||||||||||||| | || |||| ||| |||||||| ||| |||| |||||||||||||| |
|
|
| T |
15603072 |
gcaagagtagagaactttcactaagtagaagaaattacaagacctctctctaaatgcatggagtgtacaattaccattctatcttgtaaataggagaata |
15602973 |
T |
|
| Q |
318 |
caaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctca |
387 |
Q |
| |
|
| | ||||||||| ||| ||||||||||| || | || ||||||||||| |||||||||||||||||| |
|
|
| T |
15602972 |
cta--actaacacttactaagagaaacctcatagaaaaatctaatttttctttctatatttttcctctca |
15602905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 309 - 484
Target Start/End: Complemental strand, 825635 - 825460
Alignment:
| Q |
309 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattctactatgaacaagta |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
825635 |
aggagaatacaaacactaacactacctaggagaaacctcgcaggagaaactaatttttctctctatatttttcctctcactattctactaagaacaagta |
825536 |
T |
|
| Q |
409 |
gttgttgtgttactttgttctggtgtagttacaatggttcacaagcaagctatttataggagtgtaaagtcattgc |
484 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
825535 |
gttgttgtgttacttttttctggcgtagttacaatggttcacaagcaagctatttataggagtgtaaagccattgc |
825460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 309 - 484
Target Start/End: Complemental strand, 830291 - 830116
Alignment:
| Q |
309 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattctactatgaacaagta |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
830291 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactattctactaagaacaagta |
830192 |
T |
|
| Q |
409 |
gttgttgtgttactttgttctggtgtagttacaatggttcacaagcaagctatttataggagtgtaaagtcattgc |
484 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
830191 |
gttgttgtgttacttttttctggcgtagttacaatggttcacaagcaagctatttatatgagtgtaaagccattgc |
830116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 96 - 259
Target Start/End: Complemental strand, 830452 - 830288
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
830452 |
tgttaggtaccagagtaacaaaatattatcacgcagttaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
830353 |
T |
|
| Q |
196 |
aataaggggaa-aaaaccacggggcaagagtagagaactttcactaagtggaagaaattacagga |
259 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
830352 |
aataaggggaaaaaaaccacggggcaagagtggagaactttcactaagtggaagaaattacagga |
830288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 103 - 365
Target Start/End: Complemental strand, 28716070 - 28715816
Alignment:
| Q |
103 |
taccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagg |
202 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
28716070 |
taccagagtaacaaaatattatcacacatttaaaataagagacgacaaaagaggaattgaacacacaatattt-acgtggaaacccctcattaaataagg |
28715972 |
T |
|
| Q |
203 |
ggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctctt |
302 |
Q |
| |
|
||||||| |||| | |||| |||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||||| ||||||||| | || | |
|
|
| T |
28715971 |
ggaaaaa-ccacaagagaagaatagagaactttcacaaagtggaagaaattacaggacatctctctaaatgcaaggagagtacaattaccaccgtttcct |
28715873 |
T |
|
| Q |
303 |
ataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttt |
365 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| ||| ||||||||| |||| |
|
|
| T |
28715872 |
ataaataggagaat------actaacactacctaggagaaaccttacaagagaaactattttt |
28715816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 105 - 389
Target Start/End: Original strand, 30396920 - 30397191
Alignment:
| Q |
105 |
ccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggg |
204 |
Q |
| |
|
|||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||| |
|
|
| T |
30396920 |
ccagagtagcaaaatattatcacgcagctaaaataagagacgagaaaagacgaactgaacacac-atatttt-cgttgaaacccctcaacaaataaggga |
30397017 |
T |
|
| Q |
205 |
aaaaaaccacggggcaagagtagagaac-tttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctctta |
303 |
Q |
| |
|
|||||| ||| |||| |||||||||||| |||||||||||||||||||||||| ||||||| |||| ||||||||||| ||||||| |||| | || |
|
|
| T |
30397018 |
aaaaaatcacagggcgagagtagagaacttttcactaagtggaagaaattacaagacctctttctatatacaaggagagacaaattacc-ctctatgtt- |
30397115 |
T |
|
| Q |
304 |
taaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcact |
389 |
Q |
| |
|
||||||||||||| |||| |||||||||| |||||||||||||||| ||| ||||||||||| ||||||||||| |
|
|
| T |
30397116 |
gaaataggagaatattaaca----------ctaggagaaatctcacaggagaaactatatttcctctctatattgttcctctcact |
30397191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 316
Target Start/End: Original strand, 13843710 - 13844014
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccag |
108 |
Q |
| |
|
|||||| | |||||||| ||||||||||||||||||| ||||| ||||||||| ||| |||| |||| |||||| |||||||| | | || ||| |
|
|
| T |
13843710 |
accacataacatactaatatttttcttaccactccaccagtttgctacagcggaacaactatcacgagccaatggctctaataccacttgtggctatcag |
13843809 |
T |
|
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaac-tgaacacacaatattttacgtggaaacccctcaacaaataaggggaaa |
207 |
Q |
| |
|
||||| ||||||||||||| || |||| |||| ||||||| || || |||||||| |||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
13843810 |
agtaataaaatattatcacgtaagtaaagtaagttttgagaaaaaagaaaaatgaacaca--atattt-acgtggaaacccctcaacaaataaggagaaa |
13843906 |
T |
|
| Q |
208 |
aaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccactctctcttataaa |
307 |
Q |
| |
|
|| | || || |||| |||| ||||| ||||||||||||||||||||||| || | ||| |||||| ||| || |||||||||||| | ||| ||| |
|
|
| T |
13843907 |
aatt-ataggttaaaagtatagaattttcattaagtggaagaaattacaggacccctttataaatacaagaagaataaaattaccactctattttaaaaa |
13844005 |
T |
|
| Q |
308 |
taggagaat |
316 |
Q |
| |
|
||||||||| |
|
|
| T |
13844006 |
taggagaat |
13844014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 256
Target Start/End: Original strand, 31592910 - 31593068
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||| |||| || ||||||| |||||||||||||| || |||||||||||||||||||||||| |||| |||||| |||||||||||| | ||||| | |
|
|
| T |
31592910 |
tgttgggtatcaaagtaacataatattatcacacagatagaataagagacgagaaaagaggaacataacatacaataatttacgtggaaatctctcaata |
31593009 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattaca |
256 |
Q |
| |
|
||||| | |||||||||| | |||||||||||||||||||||| | ||||||||||| |
|
|
| T |
31593010 |
aataa-gaaaaaaaaccac-agataagagtagagaactttcactaaccgaaagaaattaca |
31593068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 191 - 324
Target Start/End: Complemental strand, 8004292 - 8004161
Alignment:
| Q |
191 |
caacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataatta |
290 |
Q |
| |
|
||||||||||| ||||||| | |||||| | || |||| |||||||||| | |||||||||||| | |||||||| ||| | ||| |||||| ||||| |
|
|
| T |
8004292 |
caacaaataagaggaaaaa-caacggggtatgactagaaaactttcactgaatggaagaaattataaaacctctctttaaatgtaagaagagtacaatta |
8004194 |
T |
|
| Q |
291 |
ccactctctcttataaataggagaatacaaacac |
324 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||| |
|
|
| T |
8004193 |
c-actctctcttataaataggagaatactaacac |
8004161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 318
Target Start/End: Original strand, 13840240 - 13840456
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||| || || ||||| ||| |||||| ||||||| ||||||| |||||| || || || |||||||| |
|
|
| T |
13840240 |
tgttgggtaccagaataacaaaatattatcacgtaattataataaaagatgagaaaggaggaaccgaacaca--atattt-acatgagaattcctcaaca |
13840336 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtataattaccact |
295 |
Q |
| |
|
|| |||||| |||| || || ||||||||||| || ||| || |||| || |||||||| |||||||||||| || |||||||||| |||||| | | |
|
|
| T |
13840337 |
aacaagggggaaaa--catggagcaagagtagaaaatttttaccaagtaaaa-aaattacaaaacctctctctaaatataaggagagtacaattacaatt |
13840433 |
T |
|
| Q |
296 |
ctctcttataaataggagaatac |
318 |
Q |
| |
|
|||||||| ||||| ||||||| |
|
|
| T |
13840434 |
ctctcttaaaaataaaagaatac |
13840456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 12175768 - 12175881
Alignment:
| Q |
116 |
aaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacg |
215 |
Q |
| |
|
|||||||||||| |||||||||||| ||| || |||| || || ||||||||||||||||| |||||||| ||||| |||||| ||||||||| | |
|
|
| T |
12175768 |
aaatattatcacgcaactaaaataaaagatgataaaaaagaaattgaacacacaatatttt-tgtggaaacatctcaataaataa-tggaaaaaacaatt |
12175865 |
T |
|
| Q |
216 |
gggcaagagtagagaa |
231 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
12175866 |
ggacaagagtagagaa |
12175881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 266
Target Start/End: Complemental strand, 42117876 - 42117769
Alignment:
| Q |
157 |
aactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattaca |
256 |
Q |
| |
|
||||||||| ||||||||| |||| |||||| ||||| |||||||||| ||||||||| | ||| |||||| |||||||| ||| | |||||||| | |
|
|
| T |
42117876 |
aactgaacatacaatattt-acgtagaaacctctcaattaataagggga-aaaaccacgagacaaaagtagataactttcattaaacgagagaaattata |
42117779 |
T |
|
| Q |
257 |
ggacctctct |
266 |
Q |
| |
|
||||||||| |
|
|
| T |
42117778 |
agacctctct |
42117769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 96 - 429
Target Start/End: Complemental strand, 30235339 - 30235004
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||| |||||||||||| ||||||||||| ||||| ||||||||| | | |||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
30235339 |
tgttgggtaccagagtagcaaaatattattacacagctaaaataaaaaatgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaacg |
30235241 |
T |
|
| Q |
196 |
aataaggggaaaaaa-ccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctc-taactacaaggagagtataattacca |
293 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||| |||||||| ||| | ||||||||||||||||||||||| || || |||||||||| |||||||| |
|
|
| T |
30235240 |
aataaggggaaaaaaaccacgggataagagtagaaaactttcaataactagaagaaattacaggacctctctcctatttataaggagagtacaattacca |
30235141 |
T |
|
| Q |
294 |
ctctctcttataaataggagaatacaaacactaacactacctaggagaaacctcaca-ggagaaactaatttttctctctatatttttcctctcactatt |
392 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || ||||||||||| | |||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
30235140 |
ctctctcttataaataggagaatacaaacactaacactacgtaagagaaacctcataaggagaaactaatttttctctctatatttttcctctcactact |
30235041 |
T |
|
| Q |
393 |
ctactatgaacaagtagttgttgtgttactttgttct |
429 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||| |
|
|
| T |
30235040 |
ctattgagaacaagtagttgttgtgttactttgttct |
30235004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 101 - 389
Target Start/End: Original strand, 16183636 - 16183913
Alignment:
| Q |
101 |
ggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
200 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16183636 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
16183735 |
T |
|
| Q |
201 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaactacaaggagagtataattaccactctct |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| ||||||| |||||| |
|
|
| T |
16183736 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagacaattacaagacctctctctaaatacaaggagagacaaattacc-ctctct |
16183834 |
T |
|
| Q |
300 |
cttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcact |
389 |
Q |
| |
|
||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
16183835 |
ctt-gaaataggagaatactaaca----------ctaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
16183913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 72 - 318
Target Start/End: Original strand, 8139940 - 8140183
Alignment:
| Q |
72 |
acgaaccaagggctctgataccactgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaat |
171 |
Q |
| |
|
||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||| |
|
|
| T |
8139940 |
acgaaccaatggctctaataccactgttgggtaccagagtaacaaaatattatcacacagctaaaataagagatgagaaaagagaaactgaacgcacaat |
8140039 |
T |
|
| Q |
172 |
attttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaac |
271 |
Q |
| |
|
| |||| ||||||||||||||||||||||||||| ||||||| |||| |||| |||| |||||||||| |||||||||||||| | ||||||||||| | |
|
|
| T |
8140040 |
a-tttatgtggaaacccctcaacaaataaggggagaaaaccatggggtaagattagaaaactttcactcagtggaagaaattataagacctctctcttaa |
8140138 |
T |
|
| Q |
272 |
tacaaggagagtataattaccactctctcttataaataggagaatac |
318 |
Q |
| |
|
||||||||||| ||||||| ||||||||| |||||||||||||| |
|
|
| T |
8140139 |
tacaaggagagacaaattacc-ctctctctt-gaaataggagaatac |
8140183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 16 - 282
Target Start/End: Original strand, 8138384 - 8138645
Alignment:
| Q |
16 |
agcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgttaggtaccagagtaaca |
115 |
Q |
| |
|
||||||||||||||||||||||||||| || |||| | || ||||||| | ||||||||| |||||| ||||||||||| |||| ||||||| || |
|
|
| T |
8138384 |
agcatactaagatttttcttaccactcgaccagttg----cggcagaataacgacaacgaaccaatggctctaataccactgttgggtagcagagtatca |
8138479 |
T |
|
| Q |
116 |
aaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacg |
215 |
Q |
| |
|
|| ||||||||| || ||||||||||||||||||||||| |||| |||||||| || || | |||||||||||| |||||| ||||||| ||||||||| |
|
|
| T |
8138480 |
aagtattatcacgcagctaaaataagagacgagaaaagaaaaacttaacacacagtaatt-atgtggaaaccccttaacaaacaaggggagaaaaccacg |
8138578 |
T |
|
| Q |
216 |
gggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag |
282 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||| |||||| |||||| ||||||||||| |
|
|
| T |
8138579 |
aggcaagattagagaactttcactaaatggaagaaattacaagacctccctctaaatacaaggagag |
8138645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 25441163 - 25441073
Alignment:
| Q |
9 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaagggctctgataccactgtt |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||| |||||||||||||||||| |
|
|
| T |
25441163 |
accacagagcatactaagatttttcttaccactccactagtttatcacagcggaataacaactacaaatcaatggctctgataccactgtt |
25441073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 109 - 254
Target Start/End: Original strand, 5102606 - 5102749
Alignment:
| Q |
109 |
agtaacaaaatattatcacacaactaaaataagagacgag-aaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaa |
207 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||| ||| |||||||| ||| || ||| |||| ||||| | |||| |||||||||||||||||| || |
|
|
| T |
5102606 |
agtaacaaaatattatcactcaactaaaataaaagatgagaaaaagagggactaaatacataata-tttacat-gaaaaccctcaacaaataagggg-aa |
5102702 |
T |
|
| Q |
208 |
aaaccacggggcaagagtagagaactttcactaagtggaagaaatta |
254 |
Q |
| |
|
|||||| || ||||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
5102703 |
aaaccatggagcaagagtagataacttttactaagtgggagaaatta |
5102749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 211
Target Start/End: Original strand, 36528415 - 36528529
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||| |||| |||||||||||| || || || |||||||||||||||| ||||| ||||||| ||||||||||||| |||||||||||||||||| || |
|
|
| T |
36528415 |
tgttgggtatcagagtaacaaagtaaaattacgcaactaaaataagagatgagaatagaggaattgaacacacaata-tttacgtggaaacccctccacg |
36528513 |
T |
|
| Q |
196 |
aataaggggaaaaaac |
211 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
36528514 |
aataaggaaaaaaaac |
36528529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 168; Significance: 8e-90; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 96 - 389
Target Start/End: Original strand, 27226 - 27508
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
27226 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagagaaactgaacacacaatactttacgtggaaacccctcaaca |
27325 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaactacaaggagagtataattaccac |
294 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||| ||||||||||| |||||||| |
|
|
| T |
27326 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagacaattacaatacttctctctaaatacaaggagagacaaattacca- |
27424 |
T |
|
| Q |
295 |
tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcact |
389 |
Q |
| |
|
|||||||| ||||||| |||||| |||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
27425 |
tctctctt-gaaataggtgaatactaaca----------ctaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
27508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 157; Significance: 3e-83; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 96 - 389
Target Start/End: Complemental strand, 46191546 - 46191266
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
46191546 |
tgttaggaaccagagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacaca--atattttacgtggaaacccctcaaca |
46191449 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaactacaaggagagtataattaccac |
294 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| || |||||||| ||||||| | |
|
|
| T |
46191448 |
aataaggggaaaaaaccacgggacaagagtagagaactttcactaagtggaagacaattacaagacttctctctaaatagaaggagagacaaattacc-c |
46191350 |
T |
|
| Q |
295 |
tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcact |
389 |
Q |
| |
|
|||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
46191349 |
tctctctt-gaaataggagaatactaaca----------ctaggagaaacctcacaggagaaactatatttcctctctatatttttcctctcact |
46191266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 96 - 326
Target Start/End: Complemental strand, 4130401 - 4130173
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||||| |
|
|
| T |
4130401 |
tgttaggtacttgagtaacaaaatattatcacgcaactaaaataagtgacgagaaaagaggaactgaacacacaaaattt-acgtggaaatccctcaaca |
4130303 |
T |
|
| Q |
196 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaactacaaggagagtataattaccac |
294 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||||| ||||||| | |
|
|
| T |
4130302 |
aataaagggaaaaaaccacggggcaagagtagagaactttcactaagtggaagataattacaagacttctctctaaatacaaggagagacaaattacc-c |
4130204 |
T |
|
| Q |
295 |
tctctcttataaataggagaatacaaacacta |
326 |
Q |
| |
|
|||||||| |||||||| ||||| ||||||| |
|
|
| T |
4130203 |
tctctctt-gaaataggacaatactaacacta |
4130173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 101 - 282
Target Start/End: Original strand, 30697120 - 30697300
Alignment:
| Q |
101 |
ggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
200 |
Q |
| |
|
||||| ||||||||||||||||||||| || |||| |||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
30697120 |
ggtactagagtaacaaaatattatcacgcagctaacataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa |
30697218 |
T |
|
| Q |
201 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagag |
282 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |
|
|
| T |
30697219 |
ggggaaaaagccacgtggcaagagtagagaactttcactaagtggaagaaattacaagacctctttctaaatacaaggagag |
30697300 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 364786 - 364683
Alignment:
| Q |
96 |
tgttaggtaccagagtaacaaaatattatcacacaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
195 |
Q |
| |
|
|||| ||||| ||||||| |||||| ||||| |||| |||||||| ||| ||||||| ||||| || ||||||||| ||||||| ||| ||||| ||| |
|
|
| T |
364786 |
tgtttggtacgagagtaataaaataatatcatacaattaaaataatagatgagaaaaaaggaatcgaccacacaata-tttacgttgaatccccttaacc |
364688 |
T |
|
| Q |
196 |
aataa |
200 |
Q |
| |
|
||||| |
|
|
| T |
364687 |
aataa |
364683 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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