View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1284-Insertion-1 (Length: 651)
Name: NF1284-Insertion-1
Description: NF1284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1284-Insertion-1 |
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Alignment Details
Target: chr3 (Bit Score: 567; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 567; E-Value: 0
Query Start/End: Original strand, 8 - 619
Target Start/End: Complemental strand, 25525144 - 25524532
Alignment:
| Q |
8 |
aaatcaaaaagccatccttcagctttgccgaaaaatcattttgctgtgtcaaattgggatctttttaagtcttgtttgtcgcgagaatggaccttggtct |
107 |
Q |
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| T |
25525144 |
aaatcaaaaagccatccttcagctttgccgaaaaatcattttgctgtgtcaaattgggatctttttaagtcttgtttgtcgcgagaatggaccttggtct |
25525045 |
T |
|
| Q |
108 |
gtagaaatagttttctttacatatttaggacttgtcaggtactt--ataaacttgattaaatatttctgcacttacactttcttcagtaaattgttttta |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25525044 |
gtagaaatagttttctttacatatttaggacttgtcaggtacgtgtataaacttgattaaatatttctgcacttacactttcttcagtaaattgttttta |
25524945 |
T |
|
| Q |
206 |
gtaactttttgatggtttcttccagtaatttgatgtttgacaaatttcttacgttgtcaaaggttatacttgttggcttgatcgcatccacgatgtacct |
305 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| |
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| T |
25524944 |
gtaactttttgatggtttcttccagtaatttgatgtttgacaaatttcttacgctgtcaa-ggttatacttgttggcttgatcgcatccacaatgtacct |
25524846 |
T |
|
| Q |
306 |
tcacttaaaaacttatcctaagaacgaactttcggggaatctctacatgtctgcactattttatgcattggtgcacatgctgtttaatgggactactgag |
405 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25524845 |
tcacgtaaaaacttatcctaagaacgaactttcggggaatctctacatgtctgcactattttatgcattggtgcacatgctgtttaatgggactactgag |
25524746 |
T |
|
| Q |
406 |
ttgtcacttttgatatttcgtcttcctgtcttctataaacaaagaggcaatttattttatccggcatgggcatggacattgtccacatggattcttcaat |
505 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
25524745 |
ttgtcacttttgatatttcgtcttcctgtcttctataaacaaagaggcaatttattttatccggcatgggcatggacactgtccacatggattcttcaat |
25524646 |
T |
|
| Q |
506 |
ttccttattccattgttgaatctgttgcatggactggtgtcgtgtactacattattggatttgctcctgcacctgggaggtattttactttacattcata |
605 |
Q |
| |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25524645 |
ttccttattccattgttgaatctgttgcgtggactggtgtcgtgtactacattattggatttgctcctgcacctgggaggtattttactttacattcata |
25524546 |
T |
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| Q |
606 |
tactgtcttatgac |
619 |
Q |
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|||| ||||||||| |
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| T |
25524545 |
tactctcttatgac |
25524532 |
T |
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