View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1284-Insertion-2 (Length: 874)

Name: NF1284-Insertion-2
Description: NF1284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1284-Insertion-2
NF1284-Insertion-2
[»] chr1 (54 HSPs)
chr1 (5-870)||(1140547-1141418)
chr1 (286-392)||(10304912-10305019)
chr1 (280-549)||(25032762-25033039)
chr1 (292-376)||(29551436-29551521)
chr1 (280-392)||(42276704-42276817)
chr1 (280-395)||(42491218-42491331)
chr1 (283-392)||(33938706-33938816)
chr1 (280-392)||(28677798-28677911)
chr1 (280-383)||(29938558-29938662)
chr1 (280-395)||(32784425-32784541)
chr1 (280-383)||(51418342-51418446)
chr1 (280-392)||(4882036-4882148)
chr1 (286-395)||(13999288-13999398)
chr1 (286-391)||(30853626-30853725)
chr1 (286-395)||(13969319-13969423)
chr1 (280-392)||(29205617-29205730)
chr1 (280-392)||(37822022-37822135)
chr1 (280-392)||(44517497-44517610)
chr1 (312-392)||(45193319-45193400)
chr1 (289-392)||(14265633-14265736)
chr1 (312-491)||(47551323-47551510)
chr1 (287-392)||(7995245-7995349)
chr1 (280-375)||(30678606-30678701)
chr1 (281-383)||(33486696-33486799)
chr1 (286-376)||(46930437-46930527)
chr1 (280-380)||(3233132-3233233)
chr1 (280-392)||(15390911-15391024)
chr1 (300-392)||(27535046-27535139)
chr1 (319-383)||(8737876-8737940)
chr1 (305-395)||(11877146-11877237)
chr1 (286-392)||(13488201-13488308)
chr1 (280-385)||(17347931-17348037)
chr1 (292-381)||(33144827-33144917)
chr1 (319-395)||(15312325-15312402)
chr1 (300-380)||(12537881-12537961)
chr1 (286-334)||(26771493-26771541)
chr1 (342-381)||(23791339-23791378)
chr1 (624-679)||(32878666-32878720)
chr1 (286-392)||(45750827-45750934)
chr1 (406-540)||(9298224-9298358)
chr1 (280-346)||(10188549-10188615)
chr1 (319-392)||(10627348-10627422)
chr1 (286-363)||(15790941-15791019)
chr1 (466-540)||(31427018-31427092)
chr1 (280-326)||(33703183-33703229)
chr1 (343-393)||(39927390-39927440)
chr1 (286-332)||(45659403-45659449)
chr1 (313-383)||(50107621-50107691)
chr1 (333-382)||(7421086-7421134)
chr1 (292-392)||(9298102-9298203)
chr1 (626-679)||(9298524-9298576)
chr1 (343-392)||(29726320-29726369)
chr1 (343-392)||(34039306-34039355)
chr1 (321-393)||(38783400-38783473)
[»] chr3 (60 HSPs)
chr3 (280-427)||(3961449-3961604)
chr3 (280-392)||(3457271-3457384)
chr3 (280-392)||(31462422-31462535)
chr3 (280-392)||(53155097-53155210)
chr3 (286-392)||(4082057-4082164)
chr3 (280-392)||(13701669-13701782)
chr3 (280-392)||(40883542-40883655)
chr3 (280-382)||(41868000-41868103)
chr3 (280-390)||(50981133-50981244)
chr3 (280-390)||(51084267-51084378)
chr3 (282-392)||(53402970-53403081)
chr3 (280-392)||(1074561-1074674)
chr3 (280-392)||(2192427-2192540)
chr3 (280-392)||(11819431-11819546)
chr3 (280-392)||(30155957-30156070)
chr3 (280-392)||(54706399-54706512)
chr3 (280-392)||(55090366-55090479)
chr3 (286-383)||(31270667-31270765)
chr3 (280-392)||(105715-105827)
chr3 (300-392)||(2148089-2148182)
chr3 (280-392)||(32080430-32080543)
chr3 (280-392)||(33637743-33637856)
chr3 (280-392)||(48401441-48401554)
chr3 (280-395)||(34960596-34960711)
chr3 (280-395)||(41598143-41598259)
chr3 (280-382)||(19645549-19645652)
chr3 (286-392)||(4019932-4020033)
chr3 (280-381)||(11225693-11225795)
chr3 (286-395)||(42167734-42167844)
chr3 (280-360)||(14585843-14585924)
chr3 (280-392)||(40012939-40013052)
chr3 (280-392)||(55455211-55455324)
chr3 (281-392)||(4817548-4817660)
chr3 (286-377)||(39610571-39610663)
chr3 (280-395)||(48855223-48855339)
chr3 (292-395)||(51060001-51060105)
chr3 (289-383)||(19148333-19148428)
chr3 (297-395)||(28929218-28929317)
chr3 (286-392)||(45047846-45047953)
chr3 (315-376)||(37452057-37452119)
chr3 (312-381)||(38379453-38379523)
chr3 (625-679)||(40702404-40702458)
chr3 (280-360)||(2522746-2522827)
chr3 (280-383)||(22485323-22485428)
chr3 (280-392)||(24483363-24483476)
chr3 (280-392)||(44984532-44984645)
chr3 (280-395)||(25084355-25084471)
chr3 (302-346)||(32408574-32408618)
chr3 (280-336)||(36691466-36691522)
chr3 (343-382)||(31730970-31731009)
chr3 (286-392)||(48652122-48652229)
chr3 (280-382)||(55446407-55446510)
chr3 (280-377)||(31550274-31550372)
chr3 (311-372)||(33604951-33605013)
chr3 (312-377)||(40401226-40401292)
chr3 (280-338)||(48212737-48212795)
chr3 (280-346)||(49627771-49627837)
chr3 (345-383)||(50460533-50460571)
chr3 (286-383)||(53962461-53962558)
chr3 (312-380)||(54238718-54238787)
[»] chr6 (39 HSPs)
chr6 (297-392)||(16328766-16328862)
chr6 (280-504)||(12653977-12654209)
chr6 (280-395)||(6295908-6296024)
chr6 (280-395)||(6302718-6302834)
chr6 (280-392)||(30813406-30813519)
chr6 (297-392)||(16352225-16352321)
chr6 (280-382)||(31705524-31705627)
chr6 (280-392)||(12481038-12481151)
chr6 (280-392)||(23654599-23654711)
chr6 (286-383)||(6127875-6127973)
chr6 (286-395)||(14730951-14731061)
chr6 (280-377)||(19402511-19402609)
chr6 (312-377)||(23637813-23637879)
chr6 (280-392)||(8693330-8693443)
chr6 (280-392)||(15589784-15589897)
chr6 (280-392)||(21507513-21507626)
chr6 (280-395)||(2304497-2304613)
chr6 (280-382)||(2488481-2488584)
chr6 (286-392)||(4394119-4394226)
chr6 (313-383)||(21942133-21942204)
chr6 (280-383)||(8978415-8978519)
chr6 (286-377)||(14782820-14782912)
chr6 (280-375)||(35219572-35219668)
chr6 (300-392)||(23101086-23101180)
chr6 (280-346)||(6419538-6419604)
chr6 (319-392)||(18248780-18248854)
chr6 (280-392)||(4660777-4660890)
chr6 (343-392)||(16338047-16338096)
chr6 (343-392)||(20496527-20496576)
chr6 (280-392)||(29920576-29920689)
chr6 (324-392)||(35039025-35039094)
chr6 (307-377)||(22530547-22530612)
chr6 (318-395)||(29285080-29285159)
chr6 (280-331)||(4085087-4085138)
chr6 (280-382)||(31936292-31936395)
chr6 (280-330)||(4921567-4921617)
chr6 (343-392)||(5416955-5417004)
chr6 (459-540)||(8508307-8508388)
chr6 (305-346)||(31395631-31395672)
[»] chr2 (63 HSPs)
chr2 (280-392)||(11798197-11798309)
chr2 (286-392)||(12705035-12705142)
chr2 (280-392)||(5754631-5754744)
chr2 (280-382)||(27665894-27665998)
chr2 (280-392)||(4739678-4739791)
chr2 (280-392)||(20560792-20560905)
chr2 (280-392)||(29543142-29543255)
chr2 (280-392)||(33012397-33012510)
chr2 (285-375)||(19904859-19904946)
chr2 (280-382)||(20570317-20570420)
chr2 (280-392)||(12890776-12890889)
chr2 (280-464)||(17792728-17792919)
chr2 (280-392)||(25068190-25068303)
chr2 (280-392)||(44942635-44942748)
chr2 (280-383)||(18089071-18089175)
chr2 (280-383)||(28261564-28261668)
chr2 (280-393)||(4703479-4703593)
chr2 (280-392)||(9689644-9689757)
chr2 (280-392)||(13878668-13878781)
chr2 (280-392)||(14018793-14018906)
chr2 (297-374)||(17073174-17073251)
chr2 (280-392)||(27096038-27096151)
chr2 (280-392)||(35333854-35333967)
chr2 (286-374)||(17054729-17054817)
chr2 (280-392)||(4732410-4732524)
chr2 (288-392)||(25622725-25622824)
chr2 (305-382)||(45693794-45693872)
chr2 (280-392)||(10286673-10286786)
chr2 (297-538)||(11580821-11581070)
chr2 (300-392)||(11937545-11937638)
chr2 (280-380)||(11942729-11942830)
chr2 (299-363)||(20607132-20607197)
chr2 (286-382)||(27666526-27666623)
chr2 (280-392)||(36868357-36868470)
chr2 (280-392)||(43473804-43473917)
chr2 (300-392)||(44589221-44589314)
chr2 (280-359)||(106623-106703)
chr2 (280-392)||(34471309-34471418)
chr2 (286-392)||(38534970-38535076)
chr2 (315-392)||(11561381-11561459)
chr2 (280-338)||(13113415-13113473)
chr2 (280-346)||(13548578-13548644)
chr2 (286-490)||(15920103-15920309)
chr2 (280-377)||(16136442-16136540)
chr2 (280-377)||(28230756-28230854)
chr2 (280-392)||(4603975-4604088)
chr2 (280-392)||(9978337-9978450)
chr2 (286-351)||(15439863-15439928)
chr2 (280-392)||(34416422-34416535)
chr2 (280-392)||(38384125-38384238)
chr2 (312-392)||(40039014-40039095)
chr2 (280-360)||(43696249-43696330)
chr2 (315-383)||(5172138-5172206)
chr2 (280-331)||(3527397-3527448)
chr2 (281-360)||(7071435-7071514)
chr2 (632-679)||(7582207-7582254)
chr2 (461-540)||(8531425-8531504)
chr2 (345-392)||(34480299-34480346)
chr2 (318-392)||(41797944-41798019)
chr2 (318-382)||(16570696-16570757)
chr2 (280-381)||(17267785-17267887)
chr2 (343-393)||(17304255-17304305)
chr2 (319-392)||(30933582-30933656)
[»] chr8 (49 HSPs)
chr8 (280-392)||(32778639-32778752)
chr8 (286-540)||(13575882-13576144)
chr8 (280-392)||(2024891-2025004)
chr8 (280-392)||(13570434-13570547)
chr8 (280-395)||(9501915-9502030)
chr8 (280-392)||(10148285-10148398)
chr8 (280-395)||(4757494-4757610)
chr8 (280-392)||(24790837-24790948)
chr8 (280-392)||(2234137-2234250)
chr8 (280-392)||(31202798-31202910)
chr8 (286-392)||(7579528-7579635)
chr8 (286-392)||(11162235-11162342)
chr8 (284-372)||(9627798-9627887)
chr8 (280-392)||(37612985-37613098)
chr8 (280-377)||(24210605-24210698)
chr8 (306-392)||(10338524-10338611)
chr8 (286-392)||(28296788-28296895)
chr8 (286-395)||(26673455-26673565)
chr8 (280-392)||(14600365-14600478)
chr8 (280-392)||(39067357-39067470)
chr8 (280-392)||(43936847-43936960)
chr8 (343-383)||(10952027-10952067)
chr8 (343-383)||(10960032-10960072)
chr8 (312-395)||(7256509-7256592)
chr8 (306-392)||(24700184-24700271)
chr8 (318-392)||(40490238-40490313)
chr8 (322-392)||(41431305-41431376)
chr8 (280-338)||(2968919-2968977)
chr8 (281-381)||(44410451-44410552)
chr8 (315-446)||(4429334-4429473)
chr8 (288-392)||(15665875-15665974)
chr8 (305-383)||(4928271-4928350)
chr8 (286-333)||(5328335-5328382)
chr8 (280-374)||(5526169-5526264)
chr8 (286-333)||(8054487-8054534)
chr8 (286-333)||(16937951-16937998)
chr8 (318-392)||(21471895-21471970)
chr8 (286-377)||(31407424-31407515)
chr8 (281-326)||(470946-470992)
chr8 (280-330)||(1809905-1809955)
chr8 (286-382)||(15286705-15286803)
chr8 (286-382)||(15467074-15467172)
chr8 (624-666)||(25939764-25939805)
chr8 (280-377)||(30026549-30026647)
chr8 (280-334)||(41362141-41362195)
chr8 (623-660)||(977225-977262)
chr8 (315-395)||(3204488-3204569)
chr8 (343-392)||(9799742-9799791)
chr8 (479-540)||(19489008-19489069)
[»] chr5 (50 HSPs)
chr5 (280-392)||(26293959-26294072)
chr5 (280-383)||(11647542-11647646)
chr5 (280-380)||(11734504-11734605)
chr5 (297-395)||(6012737-6012836)
chr5 (288-392)||(2555017-2555122)
chr5 (280-392)||(6281393-6281506)
chr5 (288-392)||(17095908-17096013)
chr5 (286-392)||(177769-177876)
chr5 (282-392)||(17566131-17566242)
chr5 (280-378)||(34431427-34431526)
chr5 (280-377)||(17331692-17331790)
chr5 (280-392)||(42505072-42505183)
chr5 (280-392)||(20483535-20483648)
chr5 (280-392)||(32309845-32309958)
chr5 (280-392)||(33164128-33164241)
chr5 (300-392)||(42781350-42781443)
chr5 (286-392)||(15710878-15710979)
chr5 (280-395)||(42396169-42396285)
chr5 (280-382)||(6681536-6681639)
chr5 (287-392)||(26294740-26294846)
chr5 (286-363)||(28041007-28041085)
chr5 (280-360)||(7151177-7151258)
chr5 (305-377)||(13677415-13677488)
chr5 (300-392)||(17699902-17699995)
chr5 (280-392)||(23881775-23881888)
chr5 (280-392)||(39179504-39179617)
chr5 (280-383)||(27241413-27241517)
chr5 (312-392)||(39415958-39416038)
chr5 (313-383)||(42609502-42609573)
chr5 (280-377)||(6635612-6635710)
chr5 (286-392)||(17732052-17732158)
chr5 (280-383)||(3740689-3740794)
chr5 (305-392)||(6647611-6647693)
chr5 (343-392)||(34844250-34844299)
chr5 (392-449)||(35402309-35402366)
chr5 (473-509)||(9406324-9406360)
chr5 (286-377)||(29098144-29098236)
chr5 (457-540)||(14535077-14535160)
chr5 (286-392)||(18654131-18654238)
chr5 (286-392)||(26905314-26905421)
chr5 (457-500)||(35455311-35455354)
chr5 (343-382)||(37425466-37425505)
chr5 (300-381)||(13161705-13161787)
chr5 (315-392)||(23428592-23428670)
chr5 (345-395)||(32387795-32387845)
chr5 (324-392)||(907649-907718)
chr5 (280-392)||(7771480-7771593)
chr5 (343-392)||(29154554-29154603)
chr5 (280-392)||(32347382-32347495)
chr5 (343-392)||(34866765-34866813)
[»] chr7 (68 HSPs)
chr7 (281-382)||(24988160-24988262)
chr7 (280-392)||(21991011-21991124)
chr7 (280-383)||(24319882-24319986)
chr7 (286-392)||(17508869-17508976)
chr7 (286-392)||(17544238-17544345)
chr7 (280-392)||(11833367-11833480)
chr7 (280-392)||(36253279-36253392)
chr7 (280-392)||(45457215-45457328)
chr7 (280-540)||(37714658-37714926)
chr7 (280-392)||(6667744-6667857)
chr7 (280-380)||(8180162-8180263)
chr7 (286-378)||(26771193-26771288)
chr7 (286-346)||(31254796-31254856)
chr7 (280-382)||(6622743-6622846)
chr7 (280-383)||(10624141-10624244)
chr7 (282-392)||(14762366-14762477)
chr7 (286-392)||(17473426-17473533)
chr7 (286-392)||(17579681-17579788)
chr7 (280-392)||(32587201-32587311)
chr7 (300-392)||(7765557-7765650)
chr7 (280-392)||(27535777-27535889)
chr7 (280-392)||(37593432-37593545)
chr7 (280-392)||(38273238-38273351)
chr7 (280-392)||(41288305-41288418)
chr7 (280-392)||(45482404-45482514)
chr7 (280-382)||(10094799-10094902)
chr7 (286-392)||(15674028-15674135)
chr7 (280-382)||(42603438-42603541)
chr7 (286-392)||(42645004-42645111)
chr7 (280-381)||(4621039-4621141)
chr7 (286-395)||(35134881-35134984)
chr7 (280-392)||(9785666-9785779)
chr7 (280-392)||(22747168-22747281)
chr7 (286-392)||(36719225-36719333)
chr7 (280-392)||(37375715-37375827)
chr7 (280-392)||(46025714-46025827)
chr7 (280-392)||(48304051-48304164)
chr7 (286-392)||(772777-772878)
chr7 (286-377)||(43847337-43847429)
chr7 (321-395)||(39544751-39544823)
chr7 (280-381)||(2622952-2623054)
chr7 (280-377)||(3266738-3266836)
chr7 (300-377)||(28664635-28664713)
chr7 (280-381)||(38277157-38277259)
chr7 (300-381)||(38338863-38338944)
chr7 (280-377)||(39532634-39532732)
chr7 (296-378)||(40016569-40016650)
chr7 (300-392)||(9137290-9137383)
chr7 (319-383)||(14810826-14810891)
chr7 (319-383)||(15257821-15257886)
chr7 (307-395)||(23274580-23274669)
chr7 (280-392)||(32741092-32741205)
chr7 (280-392)||(36579000-36579113)
chr7 (343-392)||(38649089-38649138)
chr7 (400-540)||(29352405-29352545)
chr7 (280-336)||(33095795-33095851)
chr7 (280-381)||(33901986-33902089)
chr7 (280-370)||(20206157-20206248)
chr7 (286-392)||(21603807-21603914)
chr7 (348-383)||(28314349-28314384)
chr7 (286-392)||(39989854-39989963)
chr7 (286-395)||(5238280-5238390)
chr7 (280-377)||(25112851-25112949)
chr7 (287-392)||(26161304-26161409)
chr7 (624-670)||(31724599-31724644)
chr7 (318-395)||(43398693-43398771)
chr7 (343-392)||(5024787-5024836)
chr7 (343-392)||(34594253-34594302)
[»] chr4 (56 HSPs)
chr4 (288-392)||(626226-626331)
chr4 (280-383)||(42197911-42198015)
chr4 (280-392)||(477680-477793)
chr4 (280-392)||(3159311-3159424)
chr4 (280-392)||(20887416-20887529)
chr4 (280-392)||(36124016-36124129)
chr4 (280-392)||(43244040-43244153)
chr4 (280-488)||(6882193-6882406)
chr4 (286-381)||(24568380-24568476)
chr4 (280-395)||(45350729-45350845)
chr4 (280-395)||(45360208-45360324)
chr4 (280-394)||(37431503-37431618)
chr4 (280-377)||(18502501-18502599)
chr4 (280-392)||(7060663-7060776)
chr4 (280-392)||(31522295-31522408)
chr4 (281-540)||(31932441-31932708)
chr4 (280-392)||(56062323-56062436)
chr4 (305-540)||(5814525-5814768)
chr4 (305-392)||(22757434-22757521)
chr4 (287-392)||(6912029-6912135)
chr4 (280-392)||(7083480-7083593)
chr4 (290-382)||(7860878-7860971)
chr4 (280-392)||(13965892-13966005)
chr4 (280-380)||(27395177-27395278)
chr4 (280-392)||(46268015-46268127)
chr4 (288-383)||(32616526-32616622)
chr4 (286-392)||(53647955-53648063)
chr4 (280-382)||(27091067-27091170)
chr4 (286-391)||(28837405-28837511)
chr4 (280-392)||(393933-394046)
chr4 (280-392)||(8517118-8517231)
chr4 (280-392)||(12716791-12716904)
chr4 (280-392)||(7084289-7084404)
chr4 (280-392)||(29266563-29266675)
chr4 (280-383)||(39837952-39838056)
chr4 (312-395)||(46829738-46829822)
chr4 (286-360)||(24100514-24100589)
chr4 (286-392)||(24611463-24611570)
chr4 (286-392)||(26742137-26742244)
chr4 (286-392)||(38943822-38943929)
chr4 (288-383)||(20399569-20399666)
chr4 (343-396)||(2945468-2945521)
chr4 (317-392)||(22621764-22621841)
chr4 (280-383)||(25658525-25658623)
chr4 (280-392)||(30202387-30202500)
chr4 (281-333)||(5388901-5388953)
chr4 (333-383)||(29576841-29576892)
chr4 (343-382)||(46775589-46775628)
chr4 (286-383)||(11209978-11210076)
chr4 (322-395)||(40198253-40198327)
chr4 (305-381)||(4518606-4518683)
chr4 (625-658)||(7083926-7083959)
chr4 (300-392)||(15182808-15182900)
chr4 (280-337)||(22121837-22121894)
chr4 (300-392)||(26674712-26674805)
chr4 (624-657)||(52465475-52465508)
[»] scaffold0321 (1 HSPs)
scaffold0321 (280-392)||(6788-6902)
[»] scaffold0155 (1 HSPs)
scaffold0155 (280-392)||(35424-35537)
[»] scaffold0001 (1 HSPs)
scaffold0001 (280-393)||(403907-404021)
[»] scaffold0294 (2 HSPs)
scaffold0294 (280-392)||(3726-3839)
scaffold0294 (298-382)||(5875-5960)
[»] scaffold0056 (1 HSPs)
scaffold0056 (280-392)||(74513-74626)
[»] scaffold0536 (1 HSPs)
scaffold0536 (280-392)||(3244-3357)
[»] scaffold0002 (1 HSPs)
scaffold0002 (321-436)||(404455-404578)
[»] scaffold1379 (1 HSPs)
scaffold1379 (300-381)||(756-838)
[»] scaffold0054 (1 HSPs)
scaffold0054 (300-383)||(41361-41445)
[»] scaffold0006 (1 HSPs)
scaffold0006 (343-395)||(36002-36054)
[»] scaffold0542 (2 HSPs)
scaffold0542 (348-395)||(4139-4186)
scaffold0542 (467-540)||(3961-4034)
[»] scaffold0007 (1 HSPs)
scaffold0007 (286-371)||(201742-201828)
[»] scaffold0432 (1 HSPs)
scaffold0432 (280-333)||(2107-2160)
[»] scaffold0288 (1 HSPs)
scaffold0288 (280-392)||(20942-21055)


Alignment Details
Target: chr1 (Bit Score: 652; Significance: 0; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 652; E-Value: 0
Query Start/End: Original strand, 5 - 870
Target Start/End: Complemental strand, 1141418 - 1140547
Alignment:
Q  5 acaatatttagaacaaagccta-ccaaaaataaaatgttatcataacgtgatttgaatagatgttaaggtaaaaggttttaaactctaaacaagttaatc 103  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1141418 acaatatttagaacaaaacctaaccaaaaataaaatgttatcataacgtgatttgaatagatgttaaggtaaaaggttttacactctaaacaagttaatc 1141319  T
Q  104 aatcatgcagttggcttttgaaaactctacacgtgctatctccatctagtccatccctaacaagcagatagcaattgtgtcgttggacattaaattagga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1141318 aatcatgcagttggcttttgaaaactctacacgtgctatctccatctagtccatccctaactagcagatagcaattgtgtcgttggacattaaattagga 1141219  T
Q  204 atcgc--aatcctaaaatatatgacttgacttctaaagtacgaaatcatataaattattaaaaaagttttgnnnnnnntaaacaatattcattcttttaa 301  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||    
T  1141218 atcgcgcaatcctaaaatatatgacttgacttctaaagtacgaaatcatataaattattaaaaaagttttgacaaaaataaacgatattcattcttttaa 1141119  T
Q  302 atcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaataacaatcgag 401  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||||||||| || |||||||||| ||||||||||||||||| ||||||||||||||     
T  1141118 atcgatagaatacatcaatataatataaattcaaagttgctaaaacaaaaataataaatatgcaaataaactcacaacatccgtgttaataacaatcgaa 1141019  T
Q  402 tatatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttgatgacaccaaagttattgattaaatttacac 501  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1141018 tatatatacttacaaatatgactatacacaagtctccgtaatactgatattttcttatctgcatcgttgatgacaccaaagttattgattaaatttacac 1140919  T
Q  502 ttgattaaagtttaacttttaatctgaatcaaataaacagcatattaaaacggtatttggtgtgactataaccgaaatacatttttcc--nnnnnnnnnn 599  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||                
T  1140918 ttgattaaagtttaacttttaatctgaatcaaataaacaacgtattaaaactgtatttggtgtgactataaccgaaatacatttttccttattttttttt 1140819  T
Q  600 nacataggaagaatttagagaggt-attttggatcaaaattgaccctaaatcatccatcttcgatagatcaagaagaagaaccgtagtgacaactaaggt 698  Q
     ||||| |||||||||||| |||| ||||||| |||||||| ||  |||||||||||||||||| |||  ||||||||||| | ||||||||||||||||    
T  1140818 tacatacgaagaatttagataggtgattttgggtcaaaattaactttaaatcatccatcttcgacagagaaagaagaagaaacatagtgacaactaaggt 1140719  T
Q  699 ttagaaagaagataacttattcagttttgtttaattgaattttcaatcaactgtcatcttaaatttaaatagaatttcatgtagttttcatttaggtgag 798  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1140718 ttagaaagaaaacaacttagtcagttttgtttaattgaattttcaatcaactgtcatcttaaatttaaatagaatttcatgtagttttcatttaggtgag 1140619  T
Q  799 tgattaagccattttctttatacttgaaatagtaaaacaacctttacacaaccgacaatttcactaagagtt 870  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1140618 tgattaagccattttctttatacttgaaatagtaaaacaacctttacacaaccgacaatttcactaagagtt 1140547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 10305019 - 10304912
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| ||||||||||||||| ||||||||| ||| ||||| |||||||||||||| ||||||||||||||||||||||     
T  10305019 atattcattcattcaaattgatagattacatcgatacaatataaattcaaaattgataaaaacaaaaatgatgaatctgcaaacaaactcacaacatcca 10304920  T
Q  385 tattaata 392  Q
    | ||||||    
T  10304919 ttttaata 10304912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 280 - 549
Target Start/End: Original strand, 25032762 - 25033039
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||||||||| ||| |||||||||| ||||||| ||| |||||| ||||||    
T  25032762 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaagtcgctaaaaacaaaaaggatgaatctgcgaacaaattcacaa 25032861  T
Q  379 catccgtattaataaca------atc-gagtatatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttga 471  Q
    ||||  | |||| ||||      ||| |||||| ||||| ||||||||||||||||   | ||||||| |||| | || | ||  ||| |  | ||||||    
T  25032862 catcaatgttaacaacatagaacatcagagtatctatgcctacaaatatgactatattaacgtctctgaaatattcatgtatttggatttagaacgttga 25032961  T
Q  472 tgacaccaaagttattgattaaatttacacttgattaaagtttaacttttaatctgaatcaaataaacagcatattaa 549  Q
    |||| ||||||| ||||||| ||||| |||||| | |||||| | ||   || |||||||||||||||| || |||||    
T  25032962 tgacgccaaagtcattgattgaatttgcacttgctcaaagttaatctcacaacctgaatcaaataaacaccacattaa 25033039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 292 - 376
Target Start/End: Original strand, 29551436 - 29551521
Alignment:
Q  292 attcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcac 376  Q
    |||| ||||||| |||||| |||||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||||    
T  29551436 attcatttaaattgatagattacatcgatacaatacaatttcaaagtcgctaaaaacaaaaaggatgaatatgcaaacaaactcac 29551521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 42276817 - 42276704
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||||||| |||||||| |||| |||||| ||||||||||||||||||||||||| ||||| |||| ||||| ||||||| ||  ||||||||||||     
T  42276817 taaacaatatgcattctttcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaataaaaaggatgaatctgtgaacaaactcacag 42276718  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  42276717 catccatgttaata 42276704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 280 - 395
Target Start/End: Complemental strand, 42491331 - 42491218
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    |||||||||||||||| || |||| |||||| ||||||||||||||| ||||||||| | | ||||  ||||||||||||| ||  ||||||||||||||    
T  42491331 taaacaatattcattcattcaaattgatagagtacatcgatacaatataaattcaaattcgataaa--aaaaatgatgaatctgtgaacaaactcacaac 42491234  T
Q  380 atccgtattaataaca 395  Q
    |||| | |||||||||    
T  42491233 atccatgttaataaca 42491218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 33938706 - 33938816
Alignment:
Q  283 acaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacat 381  Q
    ||||||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  ||||||||||||||||    
T  33938706 acaatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatttgtgaacaaactcacaacat 33938805  T
Q  382 ccgtattaata 392  Q
    || | ||||||    
T  33938806 ccatgttaata 33938816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 28677798 - 28677911
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||  || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||| |||||||||||||    
T  28677798 taaacgatattcatttattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgcgaacaaactcacaa 28677897  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  28677898 catccatgttaata 28677911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 383
Target Start/End: Complemental strand, 29938662 - 29938558
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||||||||||||| ||||| |  ||||| ||||||||||||||||||||||||||| ||| |||| | ||| ||||||| ||| |||| ||||||||    
T  29938662 taaacaatattcattcatttaagtttatagagtacatcgatacaatacaaattcaaagtcgctaaaaatagaaaggatgaatctgcgaacacactcacaa 29938563  T
Q  379 catcc 383  Q
    |||||    
T  29938562 catcc 29938558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 395
Target Start/End: Complemental strand, 32784541 - 32784425
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||  || |||| |||||| ||||||||||||||||||||||||| | ||| |||||||||||||||||| |   |||||||||||||    
T  32784541 taaactatattcattaattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaatgatgaattttttaacaaactcacaa 32784442  T
Q  379 catccgtattaataaca 395  Q
    ||| | | |||||||||    
T  32784441 cattcatgttaataaca 32784425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 383
Target Start/End: Complemental strand, 51418446 - 51418342
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| ||||||| |||||| |||||||||| |||||||||||||  ||||| |||||||||| ||||||| ||  ||||||||||||     
T  51418446 taaacgatattcattcatttaaattgatagagtacatcgatataatacaaattcaagtttgctaaaaacaaaaaagatgaatctgtgaacaaactcacag 51418347  T
Q  379 catcc 383  Q
    |||||    
T  51418346 catcc 51418342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 4882036 - 4882148
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||||||| |||||  |||||| ||  |||||||||||| |    
T  4882036 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaaaaaaagaatgaatttgtgaacaaactcacagc 4882135  T
Q  380 atccgtattaata 392  Q
    |||| | ||||||    
T  4882136 atccatgttaata 4882148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 13999398 - 13999288
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||  ||||||| | || | || ||||||| ||||||||||||||||  ||| ||||||||||||||||| ||| |||||||||||||| |||     
T  13999398 atattcatttatttaaattggtaaagtatatcgatagaatacaaattcaaagtcactataaacaaaaatgatgaatctgcgaacaaactcacaacgtcca 13999299  T
Q  385 tattaataaca 395  Q
    | |||||||||    
T  13999298 tgttaataaca 13999288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 30853626 - 30853725
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatccgt 385  Q
    |||||||||  || |||| |||| |||||||||||||||| |||||||      |||| |||||||| ||||||| |||||||||||||||||||||| |    
T  30853626 atattcatttattcaaattgatataatacatcgatacaatgcaaattc------gctagaacaaaaaggatgaatctgcaaacaaactcacaacatccat 30853719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 13969319 - 13969423
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatccgt 385  Q
    |||||||||| || |||| ||||||||||||||||||||| |||||||  |      |||||||||| ||||||| ||| |||||||||||||||||| |    
T  13969319 atattcattcattcaaattgatagaatacatcgatacaatgcaaattcgcaa-----aaaacaaaaaggatgaatctgcgaacaaactcacaacatccat 13969413  T
Q  386 attaataaca 395  Q
     |||||||||    
T  13969414 gttaataaca 13969423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 29205730 - 29205617
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||| |||| |||| | ||| |||||||||| ||||||| ||  || ||||||||||    
T  29205730 taaacgatattcattcattcaaattgatagagtacatcgatacaataaaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaataaactcacaa 29205631  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  29205630 catccatgttaata 29205617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 37822022 - 37822135
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||||||||  | |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||||||||||| ||  || |||||||||     
T  37822022 taaacgatattcattcactcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaatgatgaatctgtgaaaaaactcacag 37822121  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  37822122 catccatgttaata 37822135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 44517610 - 44517497
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| |  || |||||||||| ||||| | ||  |||||||||||||    
T  44517610 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcactaaaaacaaaaaggatgactctgtgaacaaactcacaa 44517511  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  44517510 catccatgttaata 44517497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 312 - 392
Target Start/End: Original strand, 45193319 - 45193400
Alignment:
Q  312 tacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||||||||||||| |||| | ||||||| |||||||||||||| || ||||||||||||| ||||| | ||||||    
T  45193319 tacatcgatacaatacaaatccaaattcgctaaaaacaaaaatgatgaatctgtaaacaaactcacatcatccatgttaata 45193400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 289 - 392
Target Start/End: Complemental strand, 14265736 - 14265633
Alignment:
Q  289 ttcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtat 387  Q
    |||||||||| |||| |||||| ||||| ||||||||||||||||||| | ||| |||||||||| |||| || ||  |||||||||||||||||| | |    
T  14265736 ttcattctttcaaattgatagagtacattgatacaatacaaattcaaattcgctaaaaacaaaaaggatg-atctgtgaacaaactcacaacatccatgt 14265638  T
Q  388 taata 392  Q
    |||||    
T  14265637 taata 14265633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 312 - 491
Target Start/End: Complemental strand, 47551510 - 47551323
Alignment:
Q  312 tacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata----acaatcg---agta 403  Q
    |||||||||||||||||||| |||| | ||||||| |||||| ||||||||||  |||||||||||||||||  | ||||||    | ||| |   ||||    
T  47551510 tacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatatgtgaacaaactcacaacatctatgttaatagcataaaatggcaaagta 47551411  T
Q  404 tatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttgatgacaccaaagttattgatt 491  Q
    | ||||| ||||||||||||||||  ||||||||   |||||| || ||| | |||||||| |||||| |||  |||||| |||||||    
T  47551410 tctatgcctacaaatatgactatattcaagtctccagaatactcatgtttccggatctgcaacgttgacgacgtcaaagtcattgatt 47551323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 7995245 - 7995349
Alignment:
Q  287 tattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgt 385  Q
    ||||||||| ||||||| |||||  ||||||| |||||||||||| |||| | ||||||| |||||| ||||||| ||  |||||||||||||||||| |    
T  7995245 tattcattcatttaaattgatag--tacatcggtacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaacatccat 7995342  T
Q  386 attaata 392  Q
     ||||||    
T  7995343 gttaata 7995349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 375
Target Start/End: Complemental strand, 30678701 - 30678606
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactca 375  Q
    ||||| ||||||||||  | |||| ||||||||| |||||||||||||||||||||||||| |||||  |||| | |||||  ||||| |||||||    
T  30678701 taaacgatattcattccatcaaattgatagaatatatcgatacaatacaaattcaaagttgttaaaaacaaaaggttgaatcagcaaataaactca 30678606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 281 - 383
Target Start/End: Original strand, 33486696 - 33486799
Alignment:
Q  281 aaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    |||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | | | |||||||||| ||||||| ||  |||||||||||| |    
T  33486696 aaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaacaaaaaagatgaatctgtgaacaaactcacagc 33486795  T
Q  380 atcc 383  Q
    ||||    
T  33486796 atcc 33486799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 376
Target Start/End: Complemental strand, 46930527 - 46930437
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcac 376  Q
    |||||||||||||||||| |||| | ||||| ||||||||||||||| ||| |  |||||| ||||||  ||||||||||||||||||||||    
T  46930527 atattcattcttttaaattgataaagtacat-gatacaatacaaattaaaactcactaaaaacaaaaagaatgaatatgcaaacaaactcac 46930437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 380
Target Start/End: Complemental strand, 3233233 - 3233132
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||| |||| |||| | ||| |||||||||  ||| ||||||  |||||||||||||    
T  3233233 taaacgatattcattcattcaaattgatagattacatcgatacaatataaatccaaattcgctaaaaacaaaacggattaatatgtgaacaaactcacaa 3233134  T
Q  379 ca 380  Q
    ||    
T  3233133 ca 3233132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 15390911 - 15391024
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| || || | |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  | ||||||||||     
T  15390911 taaacgatatttattcattcaacttgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgatcaaactcacag 15391010  T
Q  379 catccgtattaata 392  Q
    ||||| ||||||||    
T  15391011 catccatattaata 15391024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 392
Target Start/End: Complemental strand, 27535139 - 27535046
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||| |||||| ||||||||||||||||||||||||| | ||| ||||||||||  |||||| ||  |||||||||||| ||||| | ||||||    
T  27535139 aaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaagaatgaatctgtgaacaaactcacatcatccatgttaata 27535046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 8737940 - 8737876
Alignment:
Q  319 atacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||||||||||||||| ||||||| || || ||||||| |||||||| ||||| |||||||    
T  8737940 atacaatacaaattcaaagtcgctaaaaaaataaggatgaatctgcaaacacactcaaaacatcc 8737876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 305 - 395
Target Start/End: Original strand, 11877146 - 11877237
Alignment:
Q  305 gatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    |||||||||| ||||||||| ||| ||||||||||| | ||||||||||  |||||  ||| |||||||||||| ||||| | |||||||||    
T  11877146 gatagaatacgtcgatacaacacatattcaaagttgttaaaaacaaaaagaatgaacttgcgaacaaactcacagcatccatgttaataaca 11877237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 13488201 - 13488308
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||| ||| ||  || ||||||||| |||||     
T  13488201 atattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaagataaatttgtgaataaactcacatcatcca 13488300  T
Q  385 tattaata 392  Q
    | ||||||    
T  13488301 tgttaata 13488308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 17348037 - 17347931
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||||| || ||||||| |||||| |||||||||| |||| ||||| ||| |  |||||| |||||  ||||||| ||  |||||||||||||    
T  17348037 taaacgatattcactcatttaaattgatagagtacatcgatataatataaatttaaattctctaaaaacaaaacggatgaatttgtgaacaaactcacaa 17347938  T
Q  379 catccgt 385  Q
    |||||||    
T  17347937 catccgt 17347931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 292 - 381
Target Start/End: Original strand, 33144827 - 33144917
Alignment:
Q  292 attcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacat 381  Q
    |||| ||||||| |||| |||||||||||| ||||||||||||   | ||| |||||||||| ||| || |||| ||||||||||||||||    
T  33144827 attcatttaaattgataaaatacatcgatataatacaaattcatgatcgctaaaaacaaaaaggataaacatgcgaacaaactcacaacat 33144917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 395
Target Start/End: Original strand, 15312325 - 15312402
Alignment:
Q  319 atacaatacaaattcaaagttgctaaaac-aaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    ||||||||||||| |||||| | |||||  ||||| ||||||| ||| |||||||||||||||||| | |||||||||    
T  15312325 atacaatacaaatccaaagtcgttaaaaataaaaaggatgaatctgcgaacaaactcacaacatccatgttaataaca 15312402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 12537961 - 12537881
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaaca 380  Q
    |||| |||||| |||||| |||||||| |||| ||||||||||||||  |||| ||| ||| ||| || ||||||||||||    
T  12537961 aaattgatagagtacatcaatacaatataaatgcaaagttgctaaaaacaaaaagataaatctgcgaagaaactcacaaca 12537881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 26771541 - 26771493
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattca 334  Q
    |||||||||| || |||| |||||| |||||||||||||||||||||||    
T  26771541 atattcattcattcaaattgatagagtacatcgatacaatacaaattca 26771493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 23791378 - 23791339
Alignment:
Q  342 taaaacaaaaatgatgaatatgcaaacaaactcacaacat 381  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  23791378 taaaacaaaaatgatgaatatgagaacaaactcacaacat 23791339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 679
Target Start/End: Complemental strand, 32878720 - 32878666
Alignment:
Q  624 attttggatcaaaattgaccctaaatcatccatcttcgatagatcaagaagaagaa 679  Q
    ||||||| |||||||| ||||||||||| ||||||| ||||||| |||||||||||    
T  32878720 attttgggtcaaaattaaccctaaatcacccatctttgatagat-aagaagaagaa 32878666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 45750934 - 45750827
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||| ||| || |||| |||||| |||||| |||||||| |||| |||| ||||||||| |||||| ||||||| |   |||||||||||| |||||     
T  45750934 atattcgttcgttcaaattgatagagtacatcaatacaataaaaatccaaatttgctaaaaacaaaaaggatgaatttatgaacaaactcacagcatcca 45750835  T
Q  385 tattaata 392  Q
    | ||||||    
T  45750834 tgttaata 45750827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 406 - 540
Target Start/End: Original strand, 9298224 - 9298358
Alignment:
Q  406 tatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttgatgacaccaaagttattgattaaatttacacttga 505  Q
    ||||| || |||||||| ||||  |||||||| | |||||| |||| | | ||||||||||||||| ||  ||||||| ||||||   || | ||||||     
T  9298224 tatgcctataaatatgattatattcaagtctccgaaatactcatatctccggatctgcatcgttgacgatgccaaagtcattgatcggatctgcacttgc 9298323  T
Q  506 ttaaagtttaacttttaatctgaatcaaataaaca 540  Q
    | |||||| | |||| || ||||||||||||||||    
T  9298324 tcaaagttaatctttcaacctgaatcaaataaaca 9298358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 346
Target Start/End: Original strand, 10188549 - 10188615
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa 346  Q
    |||| ||||||||||| || ||||  ||||| ||||| | ||||||||||||||||||| |||||||    
T  10188549 taaataatattcattcattcaaattaatagagtacattggtacaatacaaattcaaagtcgctaaaa 10188615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 10627422 - 10627348
Alignment:
Q  319 atacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||| ||||||||  | |||| ||||||||| ||||||| ||  |||||||||||||||||| ||||||||    
T  10627422 atacaataaaaattcaatttcgctacaaacaaaaaggatgaatctgtgaacaaactcacaacatccatattaata 10627348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 363
Target Start/End: Original strand, 15790941 - 15791019
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatg 363  Q
    |||||||||  || |||| |||| | ||||||||||||||||||||||||| | ||| ||||||||||  |||||||||    
T  15790941 atattcatttattcaaattgataaagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaagtatgaatatg 15791019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 466 - 540
Target Start/End: Original strand, 31427018 - 31427092
Alignment:
Q  466 cgttgatgacaccaaagttattgattaaatttacacttgattaaagtttaacttttaatctgaatcaaataaaca 540  Q
    |||||| ||| | ||||||||||||| || || |||||||| |||||| | |||| || ||||||||||||||||    
T  31427018 cgttgacgacgcaaaagttattgattgaagttgcacttgatcaaagttaatctttcaacctgaatcaaataaaca 31427092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 33703183 - 33703229
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaata 326  Q
    ||||| |||||||||| ||||||| |||||| |||||||||||||||    
T  33703183 taaacgatattcattcgtttaaattgatagagtacatcgatacaata 33703229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 393
Target Start/End: Original strand, 39927390 - 39927440
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaataa 393  Q
    |||||| ||| ||||||||||| ||||||||||||||||||  ||||||||    
T  39927390 aaaacataaaggatgaatatgcgaacaaactcacaacatccaaattaataa 39927440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 332
Target Start/End: Complemental strand, 45659449 - 45659403
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaatt 332  Q
    |||||||||| |||||||||||||| |||||||||| ||| ||||||    
T  45659449 atattcattcatttaaatcgatagagtacatcgatataatgcaaatt 45659403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 50107621 - 50107691
Alignment:
Q  313 acatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||||| | |||||||||| || |||||||  |||||||||||| | | ||||||||| ||||||||    
T  50107621 acatcgatactagacaaattcaatgtcgctaaaaacaaaatgatgaatctacgaacaaactctcaacatcc 50107691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 382
Target Start/End: Complemental strand, 7421134 - 7421086
Alignment:
Q  333 caaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatc 382  Q
    |||| ||| ||||||||||| ||||||| |||||||||||||||||||||    
T  7421134 caaatttgttaaaacaaaaa-gatgaatctgcaaacaaactcacaacatc 7421086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 392
Target Start/End: Original strand, 9298102 - 9298203
Alignment:
Q  292 attcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaa 390  Q
    |||| ||||| | |||||| ||||||||||| ||| ||||| ||| |  || |||||||||| ||||||| ||| || ||||||||||||||| | ||||    
T  9298102 attcatttaagttgatagagtacatcgatactatataaatttaaaatcactgaaaacaaaaaggatgaatctgcgaataaactcacaacatccatgttaa 9298201  T
Q  391 ta 392  Q
    ||    
T  9298202 ta 9298203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 679
Target Start/End: Original strand, 9298524 - 9298576
Alignment:
Q  626 tttggatcaaaattgaccctaaatcatccatcttcgatagatcaagaagaagaa 679  Q
    ||||| |||||||||||||||||||| || ||||| ||||| ||||||||||||    
T  9298524 tttggttcaaaattgaccctaaatcacccttcttcaataga-caagaagaagaa 9298576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 29726320 - 29726369
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||||||||||| ||  |||||||||||||||||| | ||||||    
T  29726320 aaaacaaaaatgatgaatttgtgaacaaactcacaacatccatgttaata 29726369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 34039306 - 34039355
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||| ||||||||||||| | |||||||||||||| ||||| ||||||||    
T  34039306 aaaataaaaatgatgaatctacaaacaaactcacatcatccatattaata 34039355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 38783473 - 38783400
Alignment:
Q  321 acaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaataa 393  Q
    ||||||||||||||||||  |||||| |||||||||| ||| ||| | |||||||| ||||||| | |||||||    
T  38783473 acaatacaaattcaaagtctctaaaaacaaaaatgataaatttgcgagcaaactcaaaacatccatgttaataa 38783400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 1e-28; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 280 - 427
Target Start/End: Original strand, 3961449 - 3961604
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||  || |||| |||| | || ||||||||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||||    
T  3961449 taaacgatattcatttattcaaattgataaagtatatcgatacaatacaaattcaaagtcactataaacaaaaatgatgaatttgcaaacaaactcacaa 3961548  T
Q  379 catccgtattaataaca-------atcgagtatatatgcttacaaatatgactata 427  Q
    ||||| |||||||||||       || |||||||||||| ||||||||||||||||    
T  3961549 catccatattaataacataaaacgatggagtatatatgcctacaaatatgactata 3961604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 3457384 - 3457271
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| ||||||| |||||| ||||| |||||||||||||| |||| | ||| |||||||||||||||||| ||| |||||||||||||    
T  3457384 taaacgatattcattcatttaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaacaaaaatgatgaatttgcgaacaaactcacaa 3457285  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  3457284 catccatgttaata 3457271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 31462422 - 31462535
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||| | ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||| |||||||||| ||    
T  31462422 taaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatttaaattcgctaaaaacaaaaatgatgaatatgcgaacaaactcaaaa 31462521  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  31462522 catccatgttaata 31462535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 53155097 - 53155210
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||| | ||| |||||||||||||  ||| ||  |||||||||||||    
T  53155097 taaacgatattcattcatttaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaatgaataatctgtgaacaaactcacaa 53155196  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  53155197 catccatgttaata 53155210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 4082164 - 4082057
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||||||| |||||| ||||||| || |||||||||||||||||||     
T  4082164 atattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaccaaaaaggatgaatctgtaaacaaactcacaacatcca 4082065  T
Q  385 tattaata 392  Q
    | ||||||    
T  4082064 tgttaata 4082057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 13701669 - 13701782
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||||||| | ||| |||||||||| ||||||| |   |||||||||||||    
T  13701669 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatctttgaacaaactcacaa 13701768  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  13701769 catccatgttaata 13701782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 40883542 - 40883655
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||||||||||||| || |||| |||||| ||||| |||||||||||||| |||| | ||| |||||||||| ||||||| ||  ||||||||||||     
T  40883542 taaacaatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacat 40883641  T
Q  379 catccgtattaata 392  Q
    ||||||| ||||||    
T  40883642 catccgtgttaata 40883655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 41868000 - 41868103
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||| ||||| || |||| |||||| ||||||||||||||||||||||||| | ||| |||||||||| ||||||||||  ||||||||||||     
T  41868000 taaacgatatgcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatatgtgaacaaactcacac 41868099  T
Q  379 catc 382  Q
    ||||    
T  41868100 catc 41868103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 280 - 390
Target Start/End: Original strand, 50981133 - 50981244
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||| ||| | |||||||| ||||| ||||||| |||||||||||||||||| || ||||||||||    
T  50981133 taaacgatattcattcattcaaattgatagagtacatcaatatagtacaaatttaaagtcgctaaaaacaaaaatgatgaatatgcgaataaactcacaa 50981232  T
Q  379 catccgtattaa 390  Q
    | ||| ||||||    
T  50981233 cttccatattaa 50981244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 280 - 390
Target Start/End: Original strand, 51084267 - 51084378
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||| ||| | |||||||| ||||| ||||||| |||||||||||||||||| || ||||||||||    
T  51084267 taaacgatattcattcattcaaattgatagagtacatcaatatagtacaaatttaaagtcgctaaaaacaaaaatgatgaatatgcgaataaactcacaa 51084366  T
Q  379 catccgtattaa 390  Q
    | ||| ||||||    
T  51084367 cttccatattaa 51084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 282 - 392
Target Start/End: Complemental strand, 53403081 - 53402970
Alignment:
Q  282 aacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaaca 380  Q
    |||||||||||| | || |||| |||||| ||||||||||||||||||||  ||| | ||||||| |||||||||||||||||  |||||||| ||||||    
T  53403081 aacaatattcatgcattcaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaacaaaaatgatgaatatgtgaacaaactaacaaca 53402982  T
Q  381 tccgtattaata 392  Q
    ||| | ||||||    
T  53402981 tccatgttaata 53402970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 1074561 - 1074674
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||| ||||||||| |||| | ||||||| |||||| ||||||||||  ||||||||||||     
T  1074561 taaacgatattcattcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaacaaaaaggatgaatatgtgaacaaactcacat 1074660  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  1074661 catccatgttaata 1074674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 2192540 - 2192427
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||||||| | ||| |||| ||||| ||||||| ||  |||||| ||||||    
T  2192540 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaataaaaaggatgaatctgtgaacaaattcacaa 2192441  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  2192440 catccatgttaata 2192427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 11819546 - 11819431
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct---aaaacaaaaatgatgaatatgcaaacaaactcac 376  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | |||   |||||||||| ||||||||||  |||||||||||    
T  11819546 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctataaaaacaaaaaggatgaatatgtgaacaaactcac 11819447  T
Q  377 aacatccgtattaata 392  Q
    | ||||| | ||||||    
T  11819446 atcatccatgttaata 11819431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 30155957 - 30156070
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||| |||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| || |||||||  |||||||||||||    
T  30155957 taaacgatactcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggaagaatatgtgaacaaactcacaa 30156056  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  30156057 catccatgttaata 30156070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 54706399 - 54706512
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||| |||||||||||| || | | ||||||| |||||| ||||||||||  |||||||||||||    
T  54706399 taaacgatattcattcattcaaattgatagagtacatcgttacaatacaaatccatattcgctaaaaacaaaaaagatgaatatgtgaacaaactcacaa 54706498  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  54706499 catccatgttaata 54706512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 55090366 - 55090479
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| || |||||||||| ||     
T  55090366 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtaaacaaactcccat 55090465  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  55090466 catccatgttaata 55090479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 31270765 - 31270667
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    ||||| |||| || |||| |||||| |||||| |||||||||||||||||| | ||| |||||||||| ||||||| ||  ||||||||||||||||||    
T  31270765 atatttattcattcaaatggatagagtacatcaatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaacatcc 31270667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 105715 - 105827
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaa-aacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||||||||||||| || |||| |||||| ||||| ||||||||||||| |||||||  |||| |||||||| ||||||| | | ||||||||||||     
T  105715 taaacaatattcattcattcaaattgatagagtacattgatacaatacaaa-tcaaagtcactaagaacaaaaaggatgaatctccgaacaaactcacat 105813  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  105814 catccatgttaata 105827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 392
Target Start/End: Complemental strand, 2148182 - 2148089
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||| |||||| ||| | ||||||||| |||||||||||  ||| ||||||||| ||||||| ||| |||||||||||||||||| ||||||||    
T  2148182 aaattgatagagtacgttgatacaatataaattcaaagtcactataaacaaaaaggatgaatttgcgaacaaactcacaacatccatattaata 2148089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 32080430 - 32080543
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||| ||| || |||| |||||| ||||||||||||||||||||||||| | ||| |||||||||| |||||| |||  |||||||||| |     
T  32080430 taaacgatattctttcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaacatgtgaacaaactcatat 32080529  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  32080530 catccatgttaata 32080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 33637856 - 33637743
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||| | |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  ||||||||||||     
T  33637856 taaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacat 33637757  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  33637756 catccatgttaata 33637743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 48401554 - 48401441
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||| ||||||||| | ||| |||| ||||| ||||||| ||  ||||||||||||     
T  48401554 taaacgatattcattcattcaaattgatagagtacatcgatacaatataaattcaaattcgctaaaaataaaaaggatgaatctgtgaacaaactcacat 48401455  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  48401454 catccatgttaata 48401441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 280 - 395
Target Start/End: Original strand, 34960596 - 34960711
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| ||||||  |||||||||||||| |||| |||| | ||||||| |||||| |||||||||| |||||||||||||     
T  34960596 taaacgatattcattcattcaaattgatagac-acatcgatacaatataaatccaaattcgctaaaaacaaaaaggatgaatatgtaaacaaactcacag 34960694  T
Q  379 catccgtattaataaca 395  Q
    | ||| | |||||||||    
T  34960695 cttccatgttaataaca 34960711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 280 - 395
Target Start/End: Original strand, 41598143 - 41598259
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||  ||||||| |||| | |||||| |||| ||||||||||||||||  | |||||||||   || ||||||||||||||||| |||    
T  41598143 taaacgatattcatttatttaaattgatatagtacatcaatacgatacaaattcaaagttattaaaaacaaaaggaattaatatgcaaacaaactcgcaa 41598242  T
Q  379 catccgtattaataaca 395  Q
    ||||| | |||||||||    
T  41598243 catccattttaataaca 41598259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 19645652 - 19645549
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaaca-aaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||| ||||||| |||||||||| | |||||||   |||| ||||||||||  |||||||||||||    
T  19645652 taaacgatattcattcattcaaattgatagagtacatcaatacaattcaaattcaaattcgctaaaaatgaaaaggatgaatatgtgaacaaactcacaa 19645553  T
Q  379 catc 382  Q
    ||||    
T  19645552 catc 19645549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 4020033 - 4019932
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatccgt 385  Q
    |||||||||| || |||| |||||| | |||||||||||| |||||||  |      |||||||||||||||||| |||||||||||||||||||||| |    
T  4020033 atattcattcattcaaattgatagagtgcatcgatacaatgcaaattcgcaa-----aaaacaaaaatgatgaatctgcaaacaaactcacaacatccat 4019939  T
Q  386 attaata 392  Q
     ||||||    
T  4019938 gttaata 4019932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 280 - 381
Target Start/End: Complemental strand, 11225795 - 11225693
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||| |||| |||||||||||| ||||| ||||||| | |||||||||| || |||| ||| |||||| ||||||    
T  11225795 taaacgatattcattcattcaaattgatataatatatcgatacaatagaaatttaaagttgttaaaaacaaaaaggacgaatttgcgaacaaaatcacaa 11225696  T
Q  379 cat 381  Q
    |||    
T  11225695 cat 11225693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 42167734 - 42167844
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| || |||  | |||||||||||| ||||| ||| ||||||||| |||||||| ||||| |||||||||||| |||||| ||     
T  42167734 atattcattcattcaaattgacagagaatatcgatacaatataaatttaaaattgctaaaaacaaaaatggtgaatctgcaaacaaacttacaacaacca 42167833  T
Q  385 tattaataaca 395  Q
    | |||||||||    
T  42167834 tgttaataaca 42167844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 14585924 - 14585843
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaat 360  Q
    ||||| |||||||||| || |||| |||||| |||||| |||||||||||||||||| | ||| |||||||||| |||||||    
T  14585924 taaacgatattcattcattcaaattgatagagtacatcaatacaatacaaattcaaattcgctaaaaacaaaaaggatgaat 14585843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 40012939 - 40013052
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| || |||| |||||| || ||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  | |||||||||||    
T  40012939 taaacgatatttattcattcaaattgatagagtatatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgatcaaactcacaa 40013038  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  40013039 catccatgttaata 40013052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 55455324 - 55455211
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||| ||||||||||||||||||| | ||| ||||||| || ||||||| ||  || |||||||||     
T  55455324 taaacgatattcattcattcaaattgatagagtacattgatacaatacaaattcaaattcgctaaaaacaagaaggatgaatctgtgaataaactcacat 55455225  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  55455224 catccatgttaata 55455211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 4817548 - 4817660
Alignment:
Q  281 aaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaac 379  Q
    |||||||||| |||| || |||| |||||| ||||| | ||||||| ||||||||| | | ||||| ||||||  |||||||||  ||||||||||||||    
T  4817548 aaacaatatttattcattcaaattgatagagtacattggtacaatataaattcaaattcgttaaaaacaaaaagcatgaatatgtgaacaaactcacaac 4817647  T
Q  380 atccgtattaata 392  Q
    |||| | ||||||    
T  4817648 atccatgttaata 4817660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 286 - 377
Target Start/End: Complemental strand, 39610663 - 39610571
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    |||||||||| || ||||  ||||| ||||| ||||||||||||||||||| | ||| |||||||||| ||||||| ||  ||||||||||||    
T  39610663 atattcattcattcaaattaatagagtacattgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcaca 39610571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 395
Target Start/End: Complemental strand, 48855339 - 48855223
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| || |||| |||||| |||||||| ||||||||||| |||| | ||| |||||||||| ||||||| |   || ||||||||||    
T  48855339 taaacgatattaattcattcaaattgatagagtacatcgaaacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctatgaataaactcacaa 48855240  T
Q  379 catccgtattaataaca 395  Q
    ||||| | |||||||||    
T  48855239 catccatgttaataaca 48855223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 292 - 395
Target Start/End: Complemental strand, 51060105 - 51060001
Alignment:
Q  292 attcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaa 390  Q
    |||| |||||||||||||| || ||||||| |||||| ||| |||||   | |||||||||| ||||||||||  |||||||| |||||||||  |||||    
T  51060105 attcatttaaatcgatagagtaaatcgatagaatacagatttaaagtccttaaaaacaaaaaggatgaatatgtgaacaaacttacaacatccacattaa 51060006  T
Q  391 taaca 395  Q
    |||||    
T  51060005 taaca 51060001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 289 - 383
Target Start/End: Complemental strand, 19148428 - 19148333
Alignment:
Q  289 ttcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    ||||||| || |||| |||||  ||||||||||||||||||||||||| | ||| ||||  |||| ||||||||||  |||||||||||| |||||    
T  19148428 ttcattcattcaaattgatagtgtacatcgatacaatacaaattcaaattcgctaaaaattaaaaggatgaatatgtgaacaaactcacatcatcc 19148333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 297 - 395
Target Start/End: Original strand, 28929218 - 28929317
Alignment:
Q  297 tttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    ||||||| ||||||  ||||||||| |||||||||||||| | | ||||| ||||||  |||||| | | |||||||||||||||| |||||||| ||||    
T  28929218 tttaaattgatagatcacatcgatataatacaaattcaaattcgttaaaaacaaaaacaatgaatttacgaacaaactcacaacattcgtattaagaaca 28929317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 45047953 - 45047846
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| || ||||||||||||||||| |||| | ||| ||||| ||||||||||||  |  |||||||||||| |||||     
T  45047953 atattcattcattcaaattgatagagtatatcgatacaatacaaatccaaattcgctaaaaacgaaaatgatgaatcagtgaacaaactcacatcatcca 45047854  T
Q  385 tattaata 392  Q
    | ||||||    
T  45047853 tgttaata 45047846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 315 - 376
Target Start/End: Complemental strand, 37452119 - 37452057
Alignment:
Q  315 atcgatacaatacaaattcaaagttgctaaa-acaaaaatgatgaatatgcaaacaaactcac 376  Q
    |||||||||||||||||||||| || ||||| | ||||||||||||| ||| |||||||||||    
T  37452119 atcgatacaatacaaattcaaactttctaaacagaaaaatgatgaatttgcgaacaaactcac 37452057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 312 - 381
Target Start/End: Original strand, 38379453 - 38379523
Alignment:
Q  312 tacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacat 381  Q
    ||||| ||||||||||||||||||||||| | |||||||||| ||| ||| ||  ||||||||||||||||    
T  38379453 tacattgatacaatacaaattcaaagttgttaaaaacaaaaaggataaatttgtgaacaaactcacaacat 38379523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 625 - 679
Target Start/End: Complemental strand, 40702458 - 40702404
Alignment:
Q  625 ttttggatcaaaattgaccctaaatcatccatcttcgatagatcaagaagaagaa 679  Q
    ||||||||||||||||| | |||||||||| |||| ||||||||||| |||||||    
T  40702458 ttttggatcaaaattgatcataaatcatccctcttggatagatcaaggagaagaa 40702404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 2522746 - 2522827
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaat 360  Q
    ||||| |||||||||| || | | ||| ||| ||||| ||||||||||||||||||||| ||| |||| |||||||||||||    
T  2522746 taaacgatattcattcattcagaccgacagagtacattgatacaatacaaattcaaagtcgctaaaaataaaaatgatgaat 2522827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 383
Target Start/End: Complemental strand, 22485428 - 22485323
Alignment:
Q  280 taaacaatattcatt-cttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| ||||||||| | ||||||| |||| ||||||||||||||||||||||  ||| | ||| |||||||||  ||||||| |   ||||||||||||    
T  22485428 taaacgatattcatttcatttaaattgatacaatacatcgatacaatacaaatctaaattcgctaaaaacaaaatggatgaatctatgaacaaactcaca 22485329  T
Q  378 acatcc 383  Q
    ||||||    
T  22485328 acatcc 22485323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 24483363 - 24483476
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaac-aaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||| ||||||||| |||| | |||||||  ||||| ||| ||  ||  |||||||||||||    
T  24483363 taaacgatattcattcattcaaattgatagagtacatcgatagaatacaaatccaaattcgctaaaaataaaaaggataaacctgtgaacaaactcacaa 24483462  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  24483463 catccatgttaata 24483476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 44984532 - 44984645
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||| ||||| ||||||| |||||| || || ||||||||||||||||||| |  || |||||||||  ||| || |||| |||||||||| |     
T  44984532 taaacgatatccattcatttaaattgatagagtatattgatacaatacaaattcaaaatctctaaaaacaaaagggataaacatgcgaacaaactcagag 44984631  T
Q  379 catccgtattaata 392  Q
    ||||| ||||||||    
T  44984632 catccatattaata 44984645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 395
Target Start/End: Complemental strand, 25084471 - 25084355
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaa-aaatgatgaatatgcaaacaaactcacaa 378  Q
    |||| ||||| ||||| ||||||| |||||| || ||  |||||||||||||||||| ||| |||||    ||||||| ||| |||||||||||| ||||    
T  25084471 taaataatatacattcatttaaattgatagagtatattaatacaatacaaattcaaaattgttaaaaatgtaaatgataaatttgcaaacaaacttacaa 25084372  T
Q  379 catccgtattaataaca 395  Q
    ||| | | |||||||||    
T  25084371 catgcatgttaataaca 25084355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 32408574 - 32408618
Alignment:
Q  302 atcgatagaatacatcgatacaatacaaattcaaagttgctaaaa 346  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||    
T  32408574 atcgatagagtacatcgatacaatacaaattcaaagccgctaaaa 32408618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 36691466 - 36691522
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaa 336  Q
    ||||| |||||||||| || ||||||||| | |||||||||||||||||||| ||||    
T  36691466 taaacgatattcattcattcaaatcgataaagtacatcgatacaatacaaatccaaa 36691522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 382
Target Start/End: Complemental strand, 31731009 - 31730970
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatc 382  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  31731009 aaaacaaaaaggatgaatatgcgaacaaactcacaacatc 31730970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 48652122 - 48652229
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||| | |||||||||||||||||| | |||| | ||| ||||||||||  |||||| ||  |||||||||||| |||||     
T  48652122 atattcattcattcaaattgataaagtacatcgatacaatacaactccaaattcgctaaaaacaaaaagcatgaatctgtgaacaaactcacatcatcca 48652221  T
Q  385 tattaata 392  Q
    | ||||||    
T  48652222 tgttaata 48652229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 55446510 - 55446407
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| || ||| || ||||||||||| |||||||||| | ||| |||||||||| ||||||| ||  |||||| |||||     
T  55446510 taaacgatattcattcattcaaattgacagagtatatcgatacaatgcaaattcaaattcgctaaaaacaaaaaggatgaatctgtgaacaaagtcacat 55446411  T
Q  379 catc 382  Q
    ||||    
T  55446410 catc 55446407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 31550372 - 31550274
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| |||||||||| |||||||   |||| ||||| |||||  ||||||||||| || ||| |||||||| | ||||||| ||| ||||||||||||    
T  31550372 taaacgatattcattcatttaaattagtagagtacattgatacggtacaaattcaaggtcgctaaaaacaaataggatgaatctgcgaacaaactcaca 31550274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 311 - 372
Target Start/End: Original strand, 33604951 - 33605013
Alignment:
Q  311 atacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaac 372  Q
    ||||||| || ||||||||||| |||||  |||||| |||||||||||||| |||||||||||    
T  33604951 atacatcaattcaatacaaatttaaagtctctaaaaacaaaaatgatgaatttgcaaacaaac 33605013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 312 - 377
Target Start/End: Original strand, 40401226 - 40401292
Alignment:
Q  312 tacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcaca 377  Q
    |||||||||||||| |||||| || |  ||||||| |||||| |||||||||| |||||||||||||    
T  40401226 tacatcgatacaatgcaaatttaatgccgctaaaaacaaaaaggatgaatatgtaaacaaactcaca 40401292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 48212795 - 48212737
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagt 338  Q
    ||||||||||| |||| ||  ||| |||||| ||||||||| |||||||||||||||||    
T  48212795 taaacaatatttattcattccaattgatagagtacatcgatgcaatacaaattcaaagt 48212737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 346
Target Start/End: Original strand, 49627771 - 49627837
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa 346  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||| |||| |||| | |||||||    
T  49627771 taaacgatattcattcattcaaattgatagagtacatcgatacaatataaatccaaattcgctaaaa 49627837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 345 - 383
Target Start/End: Complemental strand, 50460571 - 50460533
Alignment:
Q  345 aacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  50460571 aacaaaaaggatgaatatgcgaacaaactcacaacatcc 50460533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 53962558 - 53962461
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||||| || |||| |||||| || || |||||| |||||||| ||| | |  | ||||||||| |||||| | |||||||| |||||||||||    
T  53962558 atattcattcattcaaattgatagagtatattgatacattacaaatttaaaatcggcagaacaaaaattatgaatctacaaacaaattcacaacatcc 53962461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 312 - 380
Target Start/End: Original strand, 54238718 - 54238787
Alignment:
Q  312 tacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaaca 380  Q
    ||||| ||||||||||||||||||| | ||| |||| ||||| ||||||| ||  |||||||||||||||    
T  54238718 tacattgatacaatacaaattcaaattcgctaaaaataaaaaggatgaatctgtgaacaaactcacaaca 54238787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 1e-25; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 16328766 - 16328862
Alignment:
Q  297 tttaaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    ||||||| |||||| |||||| |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| ||||||||| ||||||||    
T  16328766 tttaaattgatagagtacatccatacaatacaaattcaaagtcgctataaacaaaaaagatgaatatgcaaacaaacttacaacatccatattaata 16328862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 280 - 504
Target Start/End: Original strand, 12653977 - 12654209
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||| | |||||| ||| |||||||||||||||||| ||| ||||||||||||     
T  12653977 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaattccaaagtcgctaaaaacaaaaatgatgaatctgcgaacaaactcacat 12654076  T
Q  379 catccgtattaataac---aatcg----agtatatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttga 471  Q
    ||||| | |||||| |   || ||    | || |||||| ||||||||||||||||  |||||||| | |||||| || | | |  ||||||| ||||||    
T  12654077 catccatgttaatagcataaaacgacaaaatacatatgcctacaaatatgactatattcaagtctccggaatactcatgtctccgaatctgcaacgttga 12654176  T
Q  472 tgacaccaaagttattgattaaatttacacttg 504  Q
    |||| ||||||| |||||| | || ||||||||    
T  12654177 tgacgccaaagtcattgatcagatctacacttg 12654209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 280 - 395
Target Start/End: Original strand, 6295908 - 6296024
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||| ||||||||||| || |||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||  |  |||||||||||||    
T  6295908 taaataatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaacaaaaatgacgaatccgtgaacaaactcacaa 6296007  T
Q  379 catccgtattaataaca 395  Q
    ||||| | |||||||||    
T  6296008 catccatgttaataaca 6296024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 280 - 395
Target Start/End: Original strand, 6302718 - 6302834
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||| ||||||||||| || |||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||  |  |||||||||||||    
T  6302718 taaataatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaacaaaaatgacgaatccgtgaacaaactcacaa 6302817  T
Q  379 catccgtattaataaca 395  Q
    ||||| | |||||||||    
T  6302818 catccatgttaataaca 6302834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 30813519 - 30813406
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||||||| | ||| |||||||||| ||||||| ||  ||||||||||||     
T  30813519 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacat 30813420  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  30813419 catccatgttaata 30813406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 16352225 - 16352321
Alignment:
Q  297 tttaaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    ||||||| |||||| |||||  |||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||| ||||||||| | ||||||    
T  16352225 tttaaattgatagagtacattcatacaatacaaattaaaagtcgctataaacaaaaaagatgaatatgcaaacaaacttacaacatccatcttaata 16352321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 31705627 - 31705524
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||| | ||| |||| ||||| ||| ||| ||  |||||||||||||    
T  31705627 taaacgatattcattcatttaaattgatagagtacatcgatacaatacaaattcaaattggctaaaaataaaaaggataaatctgtgaacaaactcacaa 31705528  T
Q  379 catc 382  Q
    ||||    
T  31705527 catc 31705524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 12481038 - 12481151
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||| | |||||||||||||||||||| |||| ||||| |||||||||| ||||||| ||  ||||||||||||     
T  12481038 taaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaatttgctaaaaacaaaaaagatgaatctgtgaacaaactcacat 12481137  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  12481138 catccatgttaata 12481151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 23654711 - 23654599
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | |||||||  |||| ||||||| ||  |||||||||||| |    
T  23654711 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaggatgaatctgtgaacaaactcacatc 23654612  T
Q  380 atccgtattaata 392  Q
    |||| | ||||||    
T  23654611 atccatgttaata 23654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 286 - 383
Target Start/End: Complemental strand, 6127973 - 6127875
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||||| || |||| |||||| ||||||| || | || ||||||||||| ||||||| |||||| ||||||| |||||||||||||||| |||||    
T  6127973 atattcattcattcaaattgatagagtacatcgttaaattataaattcaaagtagctaaaagcaaaaaggatgaatttgcaaacaaactcacatcatcc 6127875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 14731061 - 14730951
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatg-aatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| ||||  |||||||||||||||||| ||||||||| ||||||| |||||  ||| ||| ||| |||||||||||| |||||     
T  14731061 atattcattcattcaaattgataacatacatcgatacaatacatattcaaagtcgctaaaataaaaagaatgaaatttgcgaacaaactcacatcatcca 14730962  T
Q  385 tattaataaca 395  Q
    | |||||||||    
T  14730961 tgttaataaca 14730951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 280 - 377
Target Start/End: Original strand, 19402511 - 19402609
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | | | |||||||||| ||||||||||  ||||||||||||    
T  19402511 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaacaaaaaggatgaatatgtgaacaaactcaca 19402609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 312 - 377
Target Start/End: Original strand, 23637813 - 23637879
Alignment:
Q  312 tacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||  ||||||||||||    
T  23637813 tacatcgatacaatacaaattcaattttgctaaaaacaaaaatgatgaatatgtgaacaaactcaca 23637879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 8693330 - 8693443
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| || |||| |||||| |||||||||||||||||||| |||| |  || |||||||||| ||||||| ||  |||||||||||||    
T  8693330 taaacgatatttattcattcaaattgatagagtacatcgatacaatacaaatccaaattcactaaaaacaaaaaggatgaatctgtgaacaaactcacaa 8693429  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  8693430 catccatgttaata 8693443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 15589784 - 15589897
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||| |||| |||| ||||| |||||||||| ||||||| ||  ||| ||||||||     
T  15589784 taaacgatattcattcattcaaattgatagagtacatcgatacaatataaatccaaatttgctaaaaacaaaaaggatgaatctgtgaaccaactcacag 15589883  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  15589884 catccatgttaata 15589897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 21507513 - 21507626
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||  |||||| |||||| ||||||||||||| |||| | ||| |||||||||| ||||||||||  ||||||||||||     
T  21507513 taaacgatattcattcattcaaactgatagagtacatcaatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatatgtgaacaaactcacat 21507612  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  21507613 catccatgttaata 21507626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 280 - 395
Target Start/End: Original strand, 2304497 - 2304613
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| ||||||| |||||| ||||||||| ||||||||||| ||| | ||| |||||||||| ||| |||  |  |||||||||||||    
T  2304497 taaacgatattcattcatttaaattgatagagtacatcgatgcaatacaaatttaaattcgctaaaaacaaaaaagataaattagtgaacaaactcacaa 2304596  T
Q  379 catccgtattaataaca 395  Q
     |||| | |||||||||    
T  2304597 tatccatgttaataaca 2304613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 2488584 - 2488481
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| || |||| |||||| |||||||||||||||||||| ||||||   | |||||||||| ||| ||||||| |||||||| ||||    
T  2488584 taaacgatatttattcattcaaattgatagagtacatcgatacaatacaaatccaaagtcattaaaaacaaaaaggataaatatgcgaacaaacttacaa 2488485  T
Q  379 catc 382  Q
    ||||    
T  2488484 catc 2488481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 4394226 - 4394119
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| ||||| |||||||||||||| |||| ||||| |||||||||  ||||||| ||  ||||||||| ||||||||     
T  4394226 atattcattcattcaaattgatagagtacattgatacaatacaaatccaaatttgctaaaaacaaaacggatgaatctgtgaacaaactctcaacatcca 4394127  T
Q  385 tattaata 392  Q
    | ||||||    
T  4394126 tgttaata 4394119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 21942133 - 21942204
Alignment:
Q  313 acatcgatacaatacaaattcaaagttgctaaaac-aaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    ||||||||| |||| ||||||||| ||| |||||  ||||||||||||| ||||||||||||||||||||||    
T  21942133 acatcgatataataaaaattcaaaattgttaaaaataaaaatgatgaatctgcaaacaaactcacaacatcc 21942204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 383
Target Start/End: Original strand, 8978415 - 8978519
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||||| |||||||| || |||  |||||| || ||  |||||||||||||||||||| || |||| |||||| ||||||  ||| |||||||||||||    
T  8978415 taaacaacattcattcattcaaactgatagagtatattaatacaatacaaattcaaagtcgccaaaaacaaaaaagatgaaattgcgaacaaactcacaa 8978514  T
Q  379 catcc 383  Q
    |||||    
T  8978515 catcc 8978519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 286 - 377
Target Start/End: Original strand, 14782820 - 14782912
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||||| || || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  ||||||||||||    
T  14782820 atattcagtcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcaca 14782912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 375
Target Start/End: Original strand, 35219572 - 35219668
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactca 375  Q
    ||||| |||||||||| || |||| | |||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  ||||||||||    
T  35219572 taaacgatattcattcattcaaattggtagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactca 35219668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 300 - 392
Target Start/End: Original strand, 23101086 - 23101180
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa--caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||| |||||| |||||||||||||||||||| ||||   |||||||  |||||| ||||||| ||  |||||||||||||||||| | ||||||    
T  23101086 aaattgatagagtacatcgatacaatacaaatccaaatccgctaaaaaacaaaaaggatgaatctgtgaacaaactcacaacatccatgttaata 23101180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 346
Target Start/End: Original strand, 6419538 - 6419604
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa 346  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | |||||||    
T  6419538 taaacgatattcattcattcaaattgatagactacatcgatacaatacaaatccaaattcgctaaaa 6419604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 18248780 - 18248854
Alignment:
Q  319 atacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||| ||||||| |  |||||| |||||||||||||||||| ||||||||||||| || | ||||||||    
T  18248780 atacaatacatattcaaaatctctaaaaacaaaaatgatgaatatgcgaacaaactcacaatattcatattaata 18248854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 4660890 - 4660777
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||| | |||| |  || |||||||||| ||||||| |   ||||||||||||     
T  4660890 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaattccaaattcactaaaaacaaaaaggatgaatctatgaacaaactcacat 4660791  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  4660790 catccatgttaata 4660777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 16338047 - 16338096
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||| ||||||| |||||||||||| ||||||||| ||||||||    
T  16338047 aaaacaaaaaagatgaatctgcaaacaaacttacaacatccatattaata 16338096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 20496576 - 20496527
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||| ||||||| ||| |||||||||||||||||| ||||||||    
T  20496576 aaaacaaaaaggatgaatctgcgaacaaactcacaacatccatattaata 20496527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 29920576 - 29920689
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||| ||| || |||| |||| | |||||||||||| |||||||| ||| | ||| |||||||||| ||||||| |   |||||||||||||    
T  29920576 taaacgatattcgttcattcaaattgataaagtacatcgatacattacaaatttaaattcgctaaaaacaaaaaggatgaatctatgaacaaactcacaa 29920675  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  29920676 catccatgttaata 29920689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 392
Target Start/End: Complemental strand, 35039094 - 35039025
Alignment:
Q  324 atacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    ||||||||||||||| | ||||| |||||||||| ||| ||| |||||||||||||||||| | ||||||    
T  35039094 atacaaattcaaagtcgttaaaaacaaaaatgataaatctgcgaacaaactcacaacatccatgttaata 35039025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 22530612 - 22530547
Alignment:
Q  307 tagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcaca 377  Q
    |||| |||||||||||||||||||||||      |||||| |||||||||||||||||| ||||||||||||    
T  22530612 tagagtacatcgatacaatacaaattca------ctaaaaacaaaaatgatgaatatgcgaacaaactcaca 22530547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 29285159 - 29285080
Alignment:
Q  318 gatacaatacaaattcaaagttgctaaaa--caaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    |||| |||||||||||||| |||||||||  |||||| |||| |||||| ||||||||||| |||| | | |||||||||    
T  29285159 gatataatacaaattcaaaattgctaaaaaacaaaaaggatggatatgcgaacaaactcacgacattcatgttaataaca 29285080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 4085138 - 4085087
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaat 331  Q
    ||||| ||||||||||  | ||||||||||| ||||||||||||||||||||    
T  4085138 taaacgatattcattcagtcaaatcgatagagtacatcgatacaatacaaat 4085087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 31936292 - 31936395
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||| ||| || |||| |||||| ||||| ||||||||||| ||  ||| | ||||||| | |||| ||||||||||  |||||||||||||    
T  31936292 taaacgatattcgttcattcaaattgatagagtacatagatacaatacatatctaaattcgctaaaaacgaaaaggatgaatatgtgaacaaactcacaa 31936391  T
Q  379 catc 382  Q
    ||||    
T  31936392 catc 31936395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 4921567 - 4921617
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaa 330  Q
    ||||| |||||||||| ||||||| |||||| ||||||||||| |||||||    
T  4921567 taaacgatattcattcatttaaattgatagagtacatcgataccatacaaa 4921617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 5416955 - 5417004
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||||||||||| | | |||||||||||||||||| | ||||||    
T  5416955 aaaacaaaaatgatgaatctacgaacaaactcacaacatccatgttaata 5417004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 459 - 540
Target Start/End: Complemental strand, 8508388 - 8508307
Alignment:
Q  459 tctgcatcgttgatgacaccaaagttattgattaaatttacacttgattaaagtttaacttttaatctgaatcaaataaaca 540  Q
    |||||| |||||| ||| | ||||| ||||||| ||| | |||||||| |||  | | ||||||||||||||||||||||||    
T  8508388 tctgcaacgttgacgacgcaaaagtcattgattcaatctgcacttgatcaaaactaatcttttaatctgaatcaaataaaca 8508307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 346
Target Start/End: Complemental strand, 31395672 - 31395631
Alignment:
Q  305 gatagaatacatcgatacaatacaaattcaaagttgctaaaa 346  Q
    |||||| |||||||||||||| |||||||||||||| |||||    
T  31395672 gatagagtacatcgatacaatccaaattcaaagttgttaaaa 31395631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 1e-25; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 11798197 - 11798309
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    ||||| |||||||||| ||||||| |||||| |||||||||||||| |||||||||||| |||||||  |||| ||||||| ||| ||||||||||||||    
T  11798197 taaacgatattcattcatttaaattgatagagtacatcgatacaattcaaattcaaagtcgctaaaaataaaaagatgaatctgcgaacaaactcacaac 11798296  T
Q  380 atccgtattaata 392  Q
    |||| | ||||||    
T  11798297 atccatgttaata 11798309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 12705142 - 12705035
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||||||| |||||||||||||| ||  |||||||||||||||||||    
T  12705142 atattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaatgatgaatctgtgaacaaactcacaacatccg 12705043  T
Q  385 tattaata 392  Q
    | ||||||    
T  12705042 tgttaata 12705035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 5754744 - 5754631
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| ||||||||||||||||| |||||||||||||| | ||| |||||||||| ||||||||||  ||||||||||||     
T  5754744 taaacgatattcattcattcaaattgatagaatacatcgatataatacaaattcaaattcgctaaaaacaaaaaggatgaatatgtgaacaaactcacat 5754645  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  5754644 catccatgttaata 5754631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 27665998 - 27665894
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaata-tgcaaacaaactcaca 377  Q
    |||||||||||||||| ||  ||| ||||||||||||  |||||||||||||| ||| ||||| ||||||||||||||||||| ||| ||||||||||||    
T  27665998 taaacaatattcattcattctaattgatagaatacatttatacaatacaaatttaaaattgctaaaaacaaaaatgatgaatattgcgaacaaactcaca 27665899  T
Q  378 acatc 382  Q
    |||||    
T  27665898 acatc 27665894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 4739791 - 4739678
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  |||||||||||||    
T  4739791 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaa 4739692  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  4739691 catccatgttaata 4739678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 20560792 - 20560905
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  |||||||||||||    
T  20560792 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaa 20560891  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  20560892 catccatgttaata 20560905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 29543255 - 29543142
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||  | |||| ||  |||||||| ||||    
T  29543255 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaacaaaaagaaagaatttgtgaacaaactaacaa 29543156  T
Q  379 catccgtattaata 392  Q
    ||||||| ||||||    
T  29543155 catccgtgttaata 29543142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 33012510 - 33012397
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||| ||| | ||| |||||||||| ||||||| ||  |||||||||||||    
T  33012510 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatttaaattcgctaaaaacaaaaaggatgaatttgtgaacaaactcacaa 33012411  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  33012410 catccatgttaata 33012397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 285 - 375
Target Start/End: Complemental strand, 19904946 - 19904859
Alignment:
Q  285 aatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactca 375  Q
    ||||||||||| ||||||| |||| | |||||||||| |||||||||||||| ||||||||| ||||   |||||||||||||||||||||    
T  19904946 aatattcattcatttaaattgatatagtacatcgatataatacaaattcaaaattgctaaaaaaaaa---atgaatatgcaaacaaactca 19904859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 20570420 - 20570317
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||| | ||||| | |||| ||||||| |||||||| |||||||||| | ||||||| |||||||||||||||||| ||||||||||||     
T  20570420 taaacgatattcatccatttaagttgataaaatacattgatacaattcaaattcaaaatcgctaaaaacaaaaatgatgaatatgcgaacaaactcacag 20570321  T
Q  379 catc 382  Q
    ||||    
T  20570320 catc 20570317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 12890776 - 12890889
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||  || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  |||||||||||||    
T  12890776 taaacgatattcattaattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaa 12890875  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  12890876 catccatgttaata 12890889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 464
Target Start/End: Complemental strand, 17792919 - 17792728
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    ||||| |||||||||  || |||| |||| | ||||||||||||||||||||||||||| | |||| || ||| ||||||| ||| ||||||  ||||||    
T  17792919 taaacgatattcattaattcaaattgataaagtacatcgatacaatacaaattcaaagtcgttaaagcataaaagatgaatttgcgaacaaaaacacaac 17792820  T
Q  380 atccgtattaat-------aacaatcgagtatatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgca 464  Q
    |||  | |||||       || | | |||||||||||| |||||||||||||||| ||||| | ||| |||||| || ||||| ||||||||    
T  17792819 atctatgttaatagcataaaatagtagagtatatatgcctacaaatatgactatatacaagccactgaaatactcatgttttcggatctgca 17792728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 25068303 - 25068190
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  ||||||||||||     
T  25068303 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacat 25068204  T
Q  379 catccgtattaata 392  Q
    |||| || ||||||    
T  25068203 catcagtgttaata 25068190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 44942748 - 44942635
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||  ||| | |||| ||||||||| ||||||| ||  |||||||||||||    
T  44942748 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatctaaattcgctataaacaaaaaggatgaatctgtgaacaaactcacaa 44942649  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  44942648 catccatgttaata 44942635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 280 - 383
Target Start/End: Original strand, 18089071 - 18089175
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||| | |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  |||||||||||||    
T  18089071 taaacgatattcattcattcaaattgatatagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaa 18089170  T
Q  379 catcc 383  Q
    |||||    
T  18089171 catcc 18089175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 280 - 383
Target Start/End: Original strand, 28261564 - 28261668
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||||||||||||| || |||| |||||| |||||||||||||||||||| |||| | | | |||||||||| ||| ||| ||  |||||||||||||    
T  28261564 taaacaatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgataaaaacaaaaaggataaatttgtgaacaaactcacaa 28261663  T
Q  379 catcc 383  Q
    |||||    
T  28261664 catcc 28261668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 280 - 393
Target Start/End: Complemental strand, 4703593 - 4703479
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttg-ctaaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| |  |||| || ||| ||||||||||||||||||||||||||| | | |||||||||| ||||||| | ||||||||||| |||    
T  4703593 taaacgatattcattcatccaaattgacagagtacatcgatacaatacaaattcaaagtcgccaaaaacaaaaaggatgaattttcaaacaaactcgcaa 4703494  T
Q  379 catccgtattaataa 393  Q
    || || | |||||||    
T  4703493 caaccatgttaataa 4703479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 9689644 - 9689757
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||| ||||| ||||||| |||||| |||||||||| |||||||||||||| | ||| |||| ||||| ||||||||||  |||||||||| |     
T  9689644 taaacgatatacattcatttaaattgatagagtacatcgatataatacaaattcaaattcgctaaaaataaaaaggatgaatatgtgaacaaactcatag 9689743  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  9689744 catccatgttaata 9689757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 13878668 - 13878781
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||  ||| | ||| |||||||||| ||||||| ||  ||||||||||||     
T  13878668 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatcaaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacat 13878767  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  13878768 catccatgttaata 13878781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 14018793 - 14018906
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||  ||| | ||| |||||||||| ||||||| ||  ||||||||||||     
T  14018793 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatcaaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacat 14018892  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  14018893 catccatgttaata 14018906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 374
Target Start/End: Original strand, 17073174 - 17073251
Alignment:
Q  297 tttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactc 374  Q
    ||||||| |||| | |||| |||||||||||||||| ||||| ||||||||||||||||||||| ||| || ||||||    
T  17073174 tttaaattgatatattacaccgatacaatacaaatttaaagtcgctaaaacaaaaatgatgaatttgcgaagaaactc 17073251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 27096151 - 27096038
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| ||| || ||||| ||||||||||||||||||| |  || |||||||||| ||||||| ||  |||||||||||||    
T  27096151 taaacgatattcattcattcaaattgatggagtacatagatacaatacaaattcaaattcactaaaaacaaaaaggatgaatctgtgaacaaactcacaa 27096052  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  27096051 catccatgttaata 27096038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 35333967 - 35333854
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | | | |||||||||| ||||||| ||  ||||||||||||     
T  35333967 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaacaaaaaagatgaatctgtgaacaaactcacat 35333868  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  35333867 catccatgttaata 35333854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 17054729 - 17054817
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactc 374  Q
    |||||||||  ||||||| |||| | |||| |||||||||| ||||| ||||| ||||||||||||||||||||| ||| || ||||||    
T  17054729 atattcatttatttaaattgatatattacaccgatacaataaaaatttaaagtcgctaaaacaaaaatgatgaatttgcgaagaaactc 17054817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 4732524 - 4732410
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagtt-gctaaaa-caaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| |||||||||  || |||| |||||| |||||| ||||||||||||| |||| || ||||||| |||||| ||||||| ||  ||||||||||||    
T  4732524 taaacgatattcattaattcaaattgatagagtacatcaatacaatacaaatccaaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcaca 4732425  T
Q  378 acatccgtattaata 392  Q
    |||||| | ||||||    
T  4732424 acatccatgttaata 4732410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 25622725 - 25622824
Alignment:
Q  288 attcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgta 386  Q
    |||||||| ||||||| |||||| ||||||||||||||  ||||||      ||||||| |||||| ||||||||||| |||||||||||||||||| |     
T  25622725 attcattcatttaaattgatagagtacatcgatacaatgtaaattc------gctaaaaacaaaaaggatgaatatgcgaacaaactcacaacatccatg 25622818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 45693794 - 45693872
Alignment:
Q  305 gatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatc 382  Q
    |||||| || || ||||||||| ||||||||||| ||||||| |||||||||||| | |||||||||||||||| ||||    
T  45693794 gatagagtatatggatacaatagaaattcaaagtcgctaaaaacaaaaatgatgattctgcaaacaaactcacatcatc 45693872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 10286673 - 10286786
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| || |||| |||||| |||||| |||||||| |||| |||| ||||||||| |||||||||||||| ||  |||||||||| ||    
T  10286673 taaacgatatttattcattcaaattgatagagtacatcaatacaatagaaatccaaatttgctaaaaacaaaaatgatgaatttgtgaacaaactcaaaa 10286772  T
Q  379 catccgtattaata 392  Q
     |||| | ||||||    
T  10286773 tatccatgttaata 10286786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 297 - 538
Target Start/End: Original strand, 11580821 - 11581070
Alignment:
Q  297 tttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata--a 393  Q
    ||||||| ||| || ||||||||||||||||||||| | ||| ||| |||||||||| ||||||| | |  ||||||||||||||||| | ||||||  |    
T  11580821 tttaaattgattgagtacatcgatacaatacaaatttacagtcgctaaaaacaaaaacgatgaatttacggacaaactcacaacatccatgttaatagta 11580920  T
Q  394 c-aatcg----agtatatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttgatgacaccaaagttattg 488  Q
    | || ||    |||| |||||  |||||||||||| |||  |||| | ||  |||||| || ||| | |||||||| |||||| ||||| ||| | ||||    
T  11580921 caaaacgacaaagtacatatgtctacaaatatgaccatattcaagccacttaaatactcatgtttccggatctgcaacgttgacgacacaaaaatcattg 11581020  T
Q  489 attaaatttacacttgattaaagtttaacttttaatctgaatcaaataaa 538  Q
    ||| ||||| |||||||| |||  | | |||| || ||||||||||||||    
T  11581021 attgaatttgcacttgatgaaacctaatctttcaacctgaatcaaataaa 11581070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 392
Target Start/End: Original strand, 11937545 - 11937638
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||| |||||| ||||||||||||||||||||||||  | ||| |||||||||| ||||||| ||  ||| |||||||||||||| | ||||||    
T  11937545 aaattgatagagtacatcgatacaatacaaattcaatttcgctaaaaacaaaaaggatgaatctgtgaactaactcacaacatccatgttaata 11937638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 380
Target Start/End: Complemental strand, 11942830 - 11942729
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgc-taaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || ||||||||||| ||| |||||| |||||||||||||| | ||  |||||||||| ||||||| ||  || ||||||||||    
T  11942830 taaacgatattcattcattcaaatcgatagagtacgtcgatataatacaaattcaaattcgcaaaaaacaaaaaggatgaatctgtgaataaactcacaa 11942731  T
Q  379 ca 380  Q
    ||    
T  11942730 ca 11942729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 20607132 - 20607197
Alignment:
Q  299 taaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatg 363  Q
    ||||| ||||||  |||||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  20607132 taaattgatagagaacatcgatacaatacaaattcaaagtcgctaaaaataaaaatgatgaatatg 20607197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 27666623 - 27666526
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatc 382  Q
    |||||||||| || |||| |||||| ||||||| ||||||||||||| ||| || || |||||||||| ||||| | | ||||||||||| |||||||    
T  27666623 atattcattcattcaaattgatagagtacatcgttacaatacaaatttaaaattactaaaaacaaaaaggatgattctacaaacaaactcgcaacatc 27666526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 36868470 - 36868357
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| || ||||||| |||| ||||| ||| | ||||||| |||||||||||||| ||   ||||||||||||    
T  36868470 taaacgatattcattcattcaaattgatagagtatatcgatataatataaatttaaattcgctaaaaacaaaaatgatgaatctgtgtacaaactcacaa 36868371  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  36868370 catccatgttaata 36868357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 43473804 - 43473917
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || ||||||||| ||||||| |||| |||| |||| |||| | ||||||| |||||| ||||||| ||  ||||||||||||     
T  43473804 taaacgatattcattcattcaaatcgatataatacattgatataatataaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacag 43473903  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  43473904 catccatgttaata 43473917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 392
Target Start/End: Complemental strand, 44589314 - 44589221
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||| ||||||||| |||||||||||||||||||||| | ||| |||||||||| ||| ||| ||  |||||||||||| ||||| | ||||||    
T  44589314 aaattgatagaataaatcgatacaatacaaattcaaattcgctaaaaacaaaaaggataaatttgtgaacaaactcacatcatccatgttaata 44589221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 359
Target Start/End: Complemental strand, 106703 - 106623
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaa 359  Q
    |||| ||||||||||| || |||| |||||| || ||||| |||||||||||||||| | ||| |||||||||||||||||    
T  106703 taaataatattcattcattcaaattgatagactatatcgaaacaatacaaattcaaattcgctaaaaacaaaaatgatgaa 106623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 34471418 - 34471309
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||| ||||| || |||| ||| || |||||||||||||||||||| |    | ||||||| |||||||||||||||||  |||||||||||||    
T  34471418 taaacgatatacattcattcaaattgatggagtacatcgatacaatacaaatcc----tcgctaaaaacaaaaatgatgaatatgtgaacaaactcacaa 34471323  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  34471322 catccatgttaata 34471309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 38534970 - 38535076
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| ||||| ||||||||||||||  ||| | ||||||| |||||| ||||||| ||  ||||||||||||||||||     
T  38534970 atattcattcattcaaattgatagagtacat-gatacaatacaaatctaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaacatcca 38535068  T
Q  385 tattaata 392  Q
    | ||||||    
T  38535069 tgttaata 38535076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 11561381 - 11561459
Alignment:
Q  315 atcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||| | ||||||||||||||||||| |||| ||||| ||||||| ||| |||||||| ||||||||| | ||||||    
T  11561381 atcgattcgatacaaattcaaagttgctaaaaataaaaaggatgaatctgcgaacaaacttacaacatccatgttaata 11561459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 13113473 - 13113415
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagt 338  Q
    ||||| ||||| |||| ||||||| ||||||||||||||||| |||| |||||||||||    
T  13113473 taaacgatatttattcatttaaattgatagaatacatcgatataatataaattcaaagt 13113415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 346
Target Start/End: Original strand, 13548578 - 13548644
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa 346  Q
    ||||| |||||||||| ||||||| |||| | |||||||||||||||| |||| ||| |||||||||    
T  13548578 taaacgatattcattcatttaaattgatatagtacatcgatacaatacgaatttaaaattgctaaaa 13548644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 286 - 490
Target Start/End: Complemental strand, 15920309 - 15920103
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| |||||||||||||||||||||||      || |||||||||| ||||||| ||  ||||||||| |||||||      
T  15920309 atattcattcattcaaattgatagagtacatcgatacaatacaaattca------ctaaaaacaaaaaagatgaatctgtgaacaaactcgcaacatcaa 15920216  T
Q  385 tattaataac---aatcg----agtatatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttgatgacac 477  Q
    | |||||| |   || ||    |||| |||||| ||||||||||||||||  |||||||  | |||||| || ||| | |||||||| |||||| ||| |    
T  15920215 tgttaatagcataaaacggcaaagtacatatgcctacaaatatgactatattcaagtcttcgaaatactcatgtttccggatctgcaacgttgacgacgc 15920116  T
Q  478 caaagttattgat 490  Q
    |||||| ||||||    
T  15920115 caaagtcattgat 15920103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 16136540 - 16136442
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| |||||||||| || |||| |||||| |||||||||| |||||||||  ||| | ||||||| |||||| ||||||| ||  ||||||||||||    
T  16136540 taaacgatattcattcattcaaattgatagagtacatcgatataatacaaatctaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcaca 16136442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 377
Target Start/End: Original strand, 28230756 - 28230854
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| |||||| ||| || |||| | |||| ||||||||||||||||||||||||| | ||| |||||||||| |||||||    |||||||||||||    
T  28230756 taaacgatattcgttcattcaaattgttagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatcactaaacaaactcaca 28230854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 4603975 - 4604088
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| || ||||||||||||||||| ||||   |||| ||||||||| ||||||| |   |||||||||||||    
T  4603975 taaacgatattcattcattcaaattgatagagtatatcgatacaatacaaatccaaatccgctagaaacaaaaaagatgaatctctgaacaaactcacaa 4604074  T
Q  379 catccgtattaata 392  Q
     |||| | ||||||    
T  4604075 tatccatgttaata 4604088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 9978337 - 9978450
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| || |||||||||||||| || |||| | ||| ||||| ||||  |||||||||  ||||||||||||     
T  9978337 taaactatattcattcattcaaattgatagagtatatcgatacaatacacatccaaattcgctaaaaacgaaaagaatgaatatgtgaacaaactcacat 9978436  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  9978437 catccatgttaata 9978450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 351
Target Start/End: Complemental strand, 15439928 - 15439863
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaa 351  Q
    ||||| |||| ||||||| |||||| |||||||||| ||||||||||||| || ||||||| ||||    
T  15439928 atatttattcatttaaattgatagattacatcgatataatacaaattcaatgtcgctaaaataaaa 15439863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 34416422 - 34416535
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| ||  ||| |||||| |||||||||||||||||||| |||| |  || |||||||||| || |||| ||  |||||||| ||||    
T  34416422 taaacgatattcattcattcgaattgatagagtacatcgatacaatacaaatccaaattcactaaaaacaaaaaagacgaatctgtgaacaaacttacaa 34416521  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  34416522 catccatgttaata 34416535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 38384125 - 38384238
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||| |  |||||||||||||||||||||||| | ||| |||||||||| ||||||  ||  |||||||||| |     
T  38384125 taaacgatattcattcattcaaattgataaagcacatcgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaacgtgtgaacaaactcagag 38384224  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  38384225 catccatgttaata 38384238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 392
Target Start/End: Original strand, 40039014 - 40039095
Alignment:
Q  312 tacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    ||||||||||||||| |||||||||||   ||||| |||||||||||||| | | |||||||||||||| ||| | ||||||    
T  40039014 tacatcgatacaataaaaattcaaagtcattaaaaacaaaaatgatgaatctacgaacaaactcacaacgtccatgttaata 40039095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 43696330 - 43696249
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaat 360  Q
    ||||| |||||||||| || |||| |||||| |||||| |||||||||||||  ||| | ||| ||||||||||||||||||    
T  43696330 taaacgatattcattcattcaaattgatagagtacatcaatacaatacaaatctaaattcgctaaaaacaaaaatgatgaat 43696249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 315 - 383
Target Start/End: Complemental strand, 5172206 - 5172138
Alignment:
Q  315 atcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    ||||||||||||||||||||||||  ||||||  |||||||||||| ||| | ||| |||| |||||||    
T  5172206 atcgatacaatacaaattcaaagtcactaaaaacaaaatgatgaatttgcgagcaatctcataacatcc 5172138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 3527448 - 3527397
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaat 331  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||    
T  3527448 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 3527397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 360
Target Start/End: Original strand, 7071435 - 7071514
Alignment:
Q  281 aaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaat 360  Q
    |||| |||||||||| || |||| |||||| ||||| |||||||||||||| |||| | |||||||  |||| |||||||    
T  7071435 aaacgatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaacaaaaggatgaat 7071514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 679
Target Start/End: Original strand, 7582207 - 7582254
Alignment:
Q  632 tcaaaattgaccctaaatcatccatcttcgatagatcaagaagaagaa 679  Q
    |||||||||||||||||||| |||| |||| ||| |||||||||||||    
T  7582207 tcaaaattgaccctaaatcacccattttcggtaggtcaagaagaagaa 7582254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 540
Target Start/End: Original strand, 8531425 - 8531504
Alignment:
Q  461 tgcatcgttgatgacaccaaagttattgattaaatttacacttgattaaagtttaacttttaatctgaatcaaataaaca 540  Q
    |||| ||||||||||| |||| | ||||||| ||||| |||||||||||||||   |||| ||  |||||||||||||||    
T  8531425 tgcaacgttgatgacatcaaattcattgattgaatttgcacttgattaaagttattctttaaacatgaatcaaataaaca 8531504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 34480346 - 34480299
Alignment:
Q  345 aacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||| ||||||||||| |||||||||||||||||| | ||||||    
T  34480346 aacaaaaaggatgaatatgcgaacaaactcacaacatccatgttaata 34480299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 41798019 - 41797944
Alignment:
Q  318 gatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    ||||||||||||||| ||| ||||||||| |||||| ||||||| ||  |||||||||||| ||||| | ||||||    
T  41798019 gatacaatacaaatttaaatttgctaaaaacaaaaaggatgaatctgtgaacaaactcacatcatccatgttaata 41797944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 16570757 - 16570696
Alignment:
Q  318 gatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatc 382  Q
    ||||||||||||||| ||||| | |||||   ||||||||||| ||| |||||||||||||||||    
T  16570757 gatacaatacaaatttaaagtcggtaaaa---aaatgatgaatttgcgaacaaactcacaacatc 16570696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 381
Target Start/End: Original strand, 17267785 - 17267887
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||  || |||| |||||| ||||| |||||||||||||| |||| |  || |||||||||| ||||||| |   |||||||||||||    
T  17267785 taaacgatattcatttattcaaattgatagagtacattgatacaatacaaatccaaattcactaaaaacaaaaaggatgaatctatgaacaaactcacaa 17267884  T
Q  379 cat 381  Q
    |||    
T  17267885 cat 17267887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 343 - 393
Target Start/End: Original strand, 17304255 - 17304305
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaataa 393  Q
    ||||||||||||||||||||  ||| ||||||||| ||||| |||||||||    
T  17304255 aaaacaaaaatgatgaatatataaataaactcacatcatccatattaataa 17304305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 30933656 - 30933582
Alignment:
Q  319 atacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||||||| ||| | ||||||| |||||| ||||| ||||  |||||||||||||||||| | ||||||    
T  30933656 atacaatacaaatttaaattcgctaaaaacaaaaaggatgattatgtgaacaaactcacaacatccatgttaata 30933582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 6e-24; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 32778639 - 32778752
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||||||||||||  || |||| |||||| |||||||||||||| ||||| |||||| ||| |||||||||||||||||| ||| |||||||||||||    
T  32778639 taaacaatattcatttattcaaattgatagagtacatcgatacaattcaaatccaaagtcgctaaaaacaaaaatgatgaatttgcgaacaaactcacaa 32778738  T
Q  379 catccgtattaata 392  Q
    || || ||||||||    
T  32778739 caaccatattaata 32778752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 286 - 540
Target Start/End: Original strand, 13575882 - 13576144
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| ||||||| |||||| ||||||||||||||||| || |||||| ||| |||||||||| ||||||| ||| ||||||||||||||||||     
T  13575882 atattcattcatttaaattgatagagtacatcgatacaatacatatccaaagtcgctaaaaacaaaaaggatgaatttgcgaacaaactcacaacatcca 13575981  T
Q  385 tattaat-------aacaatcgagtatatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttgatgacac 477  Q
    | |||||       |||||   |||||||||||||| ||||| |||||||  |||||||| | |||||| || | | | |||||||| | |||| ||  |    
T  13575982 tgttaatagcataaaacaacaaagtatatatgcttaaaaatacgactatattcaagtctcaggaatactcatttctccggatctgcaacattgaagatgc 13576081  T
Q  478 caaagttattgattaaatttacacttgattaaagtttaacttttaatctgaatcaaataaaca 540  Q
    ||||||  |||||   || | |||||| | |||||| | |||| |||||||||| ||||||||    
T  13576082 caaagtcgttgatcggatctgcacttgctcaaagttaatctttcaatctgaatctaataaaca 13576144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 2024891 - 2025004
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||||||||||||| || |||| |||||| |||||||||| ||||||||| |||| | ||| |||||||||||||||||| ||  |||||||||||||    
T  2024891 taaacaatattcattcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaacaaaaatgatgaatctgtgaacaaactcacaa 2024990  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  2024991 catccatgttaata 2025004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 13570434 - 13570547
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| ||||||| |||||| || |||||||||||||||||| ||| ||| | |||||||||| ||||||||||  |||||||||||||    
T  13570434 taaacgatattcattcatttaaattgatagagtatatcgatacaatacaaatttaaatttgttaaaaacaaaaaagatgaatatgtgaacaaactcacaa 13570533  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  13570534 catccatgttaata 13570547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 280 - 395
Target Start/End: Complemental strand, 9502030 - 9501915
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||||||  | |||||||  |||| | ||||| || |||||||||||||||    
T  9502030 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaagttcgctaaaaacaaaaagctgaatctgtaaacaaactcacaac 9501931  T
Q  380 atccgtattaataaca 395  Q
    |||| | |||||||||    
T  9501930 atccatgttaataaca 9501915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 10148398 - 10148285
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||||||||||||| || |||| |||||| |||||||||||||||||||| | || | ||| |||||||||||||||||| ||  ||||||||||||     
T  10148398 taaacaatattcattcattcaaattgatagattacatcgatacaatacaaatcctaattcgctaaaaacaaaaatgatgaatctgtgaacaaactcacat 10148299  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  10148298 catccatgttaata 10148285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 395
Target Start/End: Complemental strand, 4757610 - 4757494
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||| ||||||||||||||  ||| | ||||||| |||||| ||||||||||  |||||||||||||    
T  4757610 taaacgatattcattcattcaaattgatagagtacattgatacaatacaaatctaaattcgctaaaaacaaaaaggatgaatatgtgaacaaactcacaa 4757511  T
Q  379 catccgtattaataaca 395  Q
    ||||| | |||||||||    
T  4757510 catccatgttaataaca 4757494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 24790837 - 24790948
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||||||| ||||| ||||||| ||  ||||||||||||||    
T  24790837 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaa-aaaaaggatgaatctgtgaacaaactcacaac 24790935  T
Q  380 atccgtattaata 392  Q
    |||| | ||||||    
T  24790936 atccatgttaata 24790948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 2234137 - 2234250
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||| |||||||||||||| | ||| |||||||||| ||||| ||||  || |||||||||     
T  2234137 taaacgatattcattcattcaaattgatagagtacatcgatataatacaaattcaaattcgctaaaaacaaaaaggatgattatgtgaataaactcacat 2234236  T
Q  379 catccgtattaata 392  Q
    ||||| ||||||||    
T  2234237 catccatattaata 2234250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 31202910 - 31202798
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    ||||| |||||||||| || |||| |||||| |||||||||| ||||||||| |||| | |||||||  |||| ||||||| ||  ||||||||||||||    
T  31202910 taaacgatattcattcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaacaaaaggatgaatctgtgaacaaactcacaac 31202811  T
Q  380 atccgtattaata 392  Q
    |||| | ||||||    
T  31202810 atccatgttaata 31202798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 7579528 - 7579635
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| ||||||||||||||| |||| |||| |||||| ||||||||| ||||||  ||  ||||||||||||||||||     
T  7579528 atattcattcattcaaattgatagagtacatcgatacaatataaatccaaatttgctagaaacaaaaaggatgaaactgtgaacaaactcacaacatcca 7579627  T
Q  385 tattaata 392  Q
    | ||||||    
T  7579628 tgttaata 7579635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 11162342 - 11162235
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| ||| || |||||||||||||||||||| |||| | ||| ||||| |||| ||||||||||  ||||||||||||||||||     
T  11162342 atattcattcattcaaattgatggagtacatcgatacaatacaaatccaaattcgctaaaaacgaaaaggatgaatatgggaacaaactcacaacatcca 11162243  T
Q  385 tattaata 392  Q
    | ||||||    
T  11162242 tgttaata 11162235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 9627887 - 9627798
Alignment:
Q  284 caatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaa-aacaaaaatgatgaatatgcaaacaaac 372  Q
    |||||||||||||||  ||| |||||| ||||| ||||||||||||||||||| | | ||| | |||||| |||||||||||||||||||    
T  9627887 caatattcattctttcgaattgatagagtacattgatacaatacaaattcaaaatcgataagagcaaaaaagatgaatatgcaaacaaac 9627798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 37613098 - 37612985
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| || |||||||||||||||||||||| | | | |||||||||| ||||||| ||  ||||||||||||     
T  37613098 taaacgatattcattcattcaaattgatagagtatatcgatacaatacaaattcaaattcgttaaaaacaaaaaggatgaatctgtgaacaaactcacat 37612999  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  37612998 catccatgttaata 37612985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 24210698 - 24210605
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||||||||||||||    |||| |||||| ||||||||||||||| ||||||||| |||||||||  |||| ||||||| ||  ||||||||||||    
T  24210698 taaacaatattcattc----aaattgatagagtacatcgatacaataaaaattcaaatttgctaaaaacaaaaagatgaatttgtgaacaaactcaca 24210605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 306 - 392
Target Start/End: Original strand, 10338524 - 10338611
Alignment:
Q  306 atagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    ||||| |||||| || ||||| ||||||||| ||||||||| |||||| ||||||||||  |||||||||||||||||| | ||||||    
T  10338524 atagagtacatcaatgcaatagaaattcaaatttgctaaaaacaaaaaggatgaatatgtgaacaaactcacaacatccatgttaata 10338611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 28296788 - 28296895
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| | ||||| ||  |||||||||||| |||||     
T  28296788 atattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggttgaatctgtgaacaaactcacagcatcca 28296887  T
Q  385 tattaata 392  Q
    | ||||||    
T  28296888 tgttaata 28296895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 26673455 - 26673565
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||| ||||| ||||||| |||||| || |||||||| ||||||||| ||| | ||||||| |||||| ||||||| | | |||||||||||| |||||     
T  26673455 atatccattcatttaaattgatagagtatatcgatacgatacaaatttaaaatagctaaaaacaaaaaagatgaatctacgaacaaactcacatcatcca 26673554  T
Q  385 tattaataaca 395  Q
    | |||||||||    
T  26673555 tgttaataaca 26673565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 14600365 - 14600478
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| || ||||  ||||| ||||||||||||||||||||| ||| | ||| |||||||||| ||||||| |   |||||||||||||    
T  14600365 taaacgatatttattcattcaaattaatagagtacatcgatacaatacaaatttaaattcgctaaaaacaaaaaggatgaatctatgaacaaactcacaa 14600464  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  14600465 catccatgttaata 14600478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 39067357 - 39067470
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||||||||||| |||||| || |||||||| ||||||||| ||| | ||| ||||||||||  |||||| ||  |||||||||| |     
T  39067357 taaacgatattcattcttttaaattgatagagtatatcgatactatacaaatttaaattcgctaaaaacaaaaagaatgaatctgtgaacaaactcagag 39067456  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  39067457 catccatgttaata 39067470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 43936847 - 43936960
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| ||  ||| |||||| || |||||||||||||||||||||| |  |||||| |||||| ||||||| ||  |||||||||||||    
T  43936847 taaacgatatttattcattcgaattgatagagtagatcgatacaatacaaattcaaattcactaaaaacaaaaaggatgaatctgtgaacaaactcacaa 43936946  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  43936947 catccatgttaata 43936960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 383
Target Start/End: Original strand, 10952027 - 10952067
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  10952027 aaaacaaaaatgatgaatctgcaaacaaactcacaacatcc 10952067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 383
Target Start/End: Original strand, 10960032 - 10960072
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  10960032 aaaacaaaaatgatgaatctgcaaacaaactcacaacatcc 10960072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 312 - 395
Target Start/End: Original strand, 7256509 - 7256592
Alignment:
Q  312 tacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    ||||| ||| ||| ||||||||||||| |||||||||||||  |||||| ||| |||||| ||||||||||  |||||| ||||    
T  7256509 tacattgatgcaaaacaaattcaaagtcgctaaaacaaaaagaatgaatctgcgaacaaattcacaacatctatattaacaaca 7256592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 306 - 392
Target Start/End: Complemental strand, 24700271 - 24700184
Alignment:
Q  306 atagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    ||||| |||||||||||||| |||||||||| | ||| |||||||||| ||||||| |   |||||||||||||||||| | ||||||    
T  24700271 atagagtacatcgatacaattcaaattcaaattcgctaaaaacaaaaaggatgaatctatgaacaaactcacaacatccatgttaata 24700184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 40490238 - 40490313
Alignment:
Q  318 gatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    ||||||||| |||| |||| ||||||||| |||||||||||||| ||  |||||||||||||||||| | ||||||    
T  40490238 gatacaatataaatccaaatttgctaaaaacaaaaatgatgaatctgtgaacaaactcacaacatccatgttaata 40490313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 41431305 - 41431376
Alignment:
Q  322 caatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |  ||| |||||||||||||  ||||||||    
T  41431305 caatacaaattcaaagttgttaaaaacaaaaatgatgaatacgttaacgaactcacaacatctatattaata 41431376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 338
Target Start/End: Complemental strand, 2968977 - 2968919
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagt 338  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||| |||||||||    
T  2968977 taaacgatattcattcattcaaattgatagagtacatcgatacaatacatattcaaagt 2968919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 281 - 381
Target Start/End: Original strand, 44410451 - 44410552
Alignment:
Q  281 aaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    |||||||||||||| |||||| | |||| | | ||| ||||||||| ||||| ||| | |||| |||||| || ||||||| |||||||||||| |||||    
T  44410451 aaacaatattcatttttttaagttgatacagtccatggatacaatataaatttaaaatagctagaaacaagaaagatgaatttgcaaacaaacttacaac 44410550  T
Q  380 at 381  Q
    ||    
T  44410551 at 44410552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 315 - 446
Target Start/End: Complemental strand, 4429473 - 4429334
Alignment:
Q  315 atcgatacaatacaaattcaaagttgctaaa-acaaaaatgatgaatatgcaaacaaactcacaacatccgtattaataac----aat---cgagtatat 406  Q
    ||||||||| |||||||||||||| |||||| ||||||| ||||||| ||| || ||||||| | ||||| | |||| |||    |||    ||||||||    
T  4429473 atcgatacattacaaattcaaagtcgctaaatacaaaaaggatgaatctgcgaagaaactcatatcatccatgttaaaaacataaaattgcagagtatat 4429374  T
Q  407 atgcttacaaatatgactatacacaagtctctgtaatact 446  Q
    |||| ||||||||||||||||  ||||| |||| ||||||    
T  4429373 atgcatacaaatatgactatattcaagtatctgaaatact 4429334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 288 - 392
Target Start/End: Complemental strand, 15665974 - 15665875
Alignment:
Q  288 attcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtat 387  Q
    |||||||| || |||| |||||| |||||||||||||| |||||||       | |||||||||| || |||| |||||||||||||||||||||| | |    
T  15665974 attcattcattcaaattgatagagtacatcgatacaatgcaaattcgc-----caaaaacaaaaaggacgaatctgcaaacaaactcacaacatccatgt 15665880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 383
Target Start/End: Complemental strand, 4928350 - 4928271
Alignment:
Q  305 gatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||| |||||| ||| |||||||||||||||| | | |||||||||| ||||||| | | ||||||||||| ||||||    
T  4928350 gatagagtacatcaatataatacaaattcaaagtcgttaaaaacaaaaaagatgaatctccgaacaaactcacgacatcc 4928271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 5328382 - 5328335
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattc 333  Q
    |||||||||||||||||| |||||| |||||||||| ||| |||||||    
T  5328382 atattcattcttttaaattgatagagtacatcgatataatgcaaattc 5328335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 5526264 - 5526169
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactc 374  Q
    ||||| ||||| |||| || |||| |||||| ||||||||||||||| || |||||| | ||| |||| ||||| ||||||||||  |||||||||    
T  5526264 taaacgatatttattcattcaaattgatagagtacatcgatacaatataagttcaaattcgctaaaaataaaaaggatgaatatgtgaacaaactc 5526169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 8054487 - 8054534
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattc 333  Q
    |||||||||| || |||| ||||||||||||||||| |||||||||||    
T  8054487 atattcattcattcaaattgatagaatacatcgatataatacaaattc 8054534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 16937951 - 16937998
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattc 333  Q
    |||||||||| ||||||| |||||| |||||||||||||| |||||||    
T  16937951 atattcattcatttaaattgatagagtacatcgatacaatgcaaattc 16937998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 21471970 - 21471895
Alignment:
Q  318 gatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||||||||||||||| || |||||| ||| ||||||| ||| |||||||||| || |||| | ||||||    
T  21471970 gatacaatacaaattcaaagtttctaaaaacagaaaggatgaatctgcgaacaaactcagaatatccatgttaata 21471895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 377
Target Start/End: Original strand, 31407424 - 31407515
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    |||| ||||| || |||| |||| | ||||| ||||||||||||||||||| | |||||||  |||| ||||||| ||  ||||||||||||    
T  31407424 atatccattcattcaaattgatatagtacattgatacaatacaaattcaaattcgctaaaaacaaaaagatgaatctgtgaacaaactcaca 31407515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 470946 - 470992
Alignment:
Q  281 aaacaatattcattcttttaaatcgatagaatacatc-gatacaata 326  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  470946 aaacaatattcattcatttaaattgatagaatacatcagatacaata 470992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 1809905 - 1809955
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaa 330  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||    
T  1809905 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaa 1809955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 15286705 - 15286803
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatac-aaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatc 382  Q
    |||||||||| ||||||| |||||| |||||  ||||||||| |||| |||| | ||| |||||||||||||| ||| |   |||||||||||||||||    
T  15286705 atattcattcatttaaattgatagagtacatttatacaatacaaaatccaaattcgctaaaaacaaaaatgataaatctatgaacaaactcacaacatc 15286803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 382
Target Start/End: Original strand, 15467074 - 15467172
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatac-aaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatc 382  Q
    |||||||||| ||||||| |||||| |||||  ||||||||| |||| |||| | ||| |||||||||||||| ||| |   |||||||||||||||||    
T  15467074 atattcattcatttaaattgatagagtacatttatacaatacaaaatccaaattcgctaaaaacaaaaatgataaatctatgaacaaactcacaacatc 15467172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 624 - 666
Target Start/End: Original strand, 25939764 - 25939805
Alignment:
Q  624 attttggatcaaaattgaccctaaatcatccatcttcgataga 666  Q
    ||||||| |||||||||||||||||||| ||||||||||||||    
T  25939764 attttgggtcaaaattgaccctaaatca-ccatcttcgataga 25939805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 377
Target Start/End: Original strand, 30026549 - 30026647
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| ||||| |||| || |||| |||||| || || ||||||||||||||||||| | ||| |||| ||||| ||||||| ||  ||||||||||||    
T  30026549 taaacgatatttattcattcaaattgatagagtatattgatacaatacaaattcaaattcgctaaaaataaaaaggatgaatctgtgaacaaactcaca 30026647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 41362195 - 41362141
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattca 334  Q
    ||||| |||||||||| || |||| |||||| |||||| ||||||||||||||||    
T  41362195 taaacgatattcattcattcaaattgatagagtacatcaatacaatacaaattca 41362141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 660
Target Start/End: Complemental strand, 977262 - 977225
Alignment:
Q  623 tattttggatcaaaattgaccctaaatcatccatcttc 660  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  977262 tattttgaatcaaaattgaccataaatcatccatcttc 977225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 315 - 395
Target Start/End: Original strand, 3204488 - 3204569
Alignment:
Q  315 atcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    |||||||||||| ||||||||| |  |||||| |||||||||||||| |   |||||||||||| ||||| | |||||||||    
T  3204488 atcgatacaatataaattcaaattcactaaaaacaaaaatgatgaatctttgaacaaactcacatcatccatgttaataaca 3204569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 9799742 - 9799791
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||| || |||||||| |||||||||||||||||| | ||||||    
T  9799742 aaaacaaaaaagaggaatatgcgaacaaactcacaacatccatgttaata 9799791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 479 - 540
Target Start/End: Complemental strand, 19489069 - 19489008
Alignment:
Q  479 aaagttattgattaaatttacacttgattaaagtttaacttttaatctgaatcaaataaaca 540  Q
    ||||| ||||||| ||||| |||||||| |||||| | |||| || ||||||||||||||||    
T  19489069 aaagtcattgattgaatttgcacttgatcaaagttaatctttcaacctgaatcaaataaaca 19489008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 6e-24; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 26294072 - 26293959
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||| ||||||||||||||||||||| | ||| |||||||||| ||||||||||  |||||||||||||    
T  26294072 taaacgatattcattcattcaaatagatagagtacgtcgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatatgtgaacaaactcacaa 26293973  T
Q  379 catccgtattaata 392  Q
    ||||| ||||||||    
T  26293972 catccatattaata 26293959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 280 - 383
Target Start/End: Complemental strand, 11647646 - 11647542
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||| |||||||||  || |||  ||||| |||||| |||||||||||||||||||| ||||||| ||||||||||||||||||  ||||||||||||    
T  11647646 taaacattattcattcacttcaattaatagagtacatcaatacaatacaaattcaaagtcgctaaaaacaaaaatgatgaatatgcgtacaaactcacaa 11647547  T
Q  379 catcc 383  Q
    |||||    
T  11647546 catcc 11647542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 380
Target Start/End: Original strand, 11734504 - 11734605
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||| | ||||||||||||||||||||||||| | ||| |||||||||| ||||||||||  |||||||||||||    
T  11734504 taaacgatattcattcattcaaattgataaagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatatgtgaacaaactcacaa 11734603  T
Q  379 ca 380  Q
    ||    
T  11734604 ca 11734605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 297 - 395
Target Start/End: Original strand, 6012737 - 6012836
Alignment:
Q  297 tttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatg-atgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    ||||||| |||||| |||||  |||||||||||||||||||| |||||||  |||||| |||||| |||||||||||||||||||||  | |||||||||    
T  6012737 tttaaattgatagagtacattaatacaatacaaattcaaagtcgctaaaaataaaatgaatgaatttgcaaacaaactcacaacatcaatgttaataaca 6012836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 2555017 - 2555122
Alignment:
Q  288 attcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgta 386  Q
    |||||||| || |||| |||||| |||||||||||||||||||| |||| ||  ||||| |||||| ||||||||||  |||||||||||||||||| |     
T  2555017 attcattcattcaaattgatagagtacatcgatacaatacaaatccaaatttcttaaaaacaaaaaggatgaatatgtgaacaaactcacaacatccatg 2555116  T
Q  387 ttaata 392  Q
    ||||||    
T  2555117 ttaata 2555122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 6281506 - 6281393
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| || |||||||||||||||||||||| | ||| |||||||||| ||||||| ||  ||||||||||||     
T  6281506 taaacgatattcattcattcaaattgatagagtatatcgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacat 6281407  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  6281406 catccatgttaata 6281393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 17095908 - 17096013
Alignment:
Q  288 attcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgta 386  Q
    |||||||| || |||| |||||| ||||||||||||||||||||||||| | ||| |||||||||| ||||||| ||  |||||||||||| ||||| |     
T  17095908 attcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacatcatccatg 17096007  T
Q  387 ttaata 392  Q
    ||||||    
T  17096008 ttaata 17096013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 177769 - 177876
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| ||| || |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  ||||||||||||||||||     
T  177769 atattcattcattcaaattgatggagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaacatcca 177868  T
Q  385 tattaata 392  Q
    | ||||||    
T  177869 tgttaata 177876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 392
Target Start/End: Original strand, 17566131 - 17566242
Alignment:
Q  282 aacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaaca 380  Q
    ||||||||| |||| || |||| |||||| ||||| ||||| ||||||||||||||| |||| |||||| |  ||||||| |||||||||||||| ||||    
T  17566131 aacaatatttattcattcaaattgatagattacattgatactatacaaattcaaagtcgctataaacaacacagatgaatttgcaaacaaactcataaca 17566230  T
Q  381 tccgtattaata 392  Q
    ||| | ||||||    
T  17566231 tccattttaata 17566242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 280 - 378
Target Start/End: Complemental strand, 34431526 - 34431427
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  |||||||||||||    
T  34431526 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatttgtgaacaaactcacaa 34431427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 17331790 - 17331692
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  ||||||||||||    
T  17331790 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcaca 17331692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 42505072 - 42505183
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||| |||||||||||||||  |||  || |||||||||| ||||||| ||| |||||||||||||    
T  42505072 taaacgatattcattcattcaaattgatagagtacatcaatacaatacaaattc--agtctctaaaaacaaaaaggatgaatctgcgaacaaactcacaa 42505169  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  42505170 catccatgttaata 42505183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 20483648 - 20483535
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || ||||  ||||| |||||||||| ||||||||| |||| | ||||||| |||||| ||||||| ||  |||||||||||||    
T  20483648 taaacgatattcattcattcaaattaatagagtacatcgatataatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaa 20483549  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  20483548 catccatgttaata 20483535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 32309958 - 32309845
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| || |||| |||||| |||||||||| |||| ||||||||||| | | |||| ||||| ||||||| ||| |||||||||||||    
T  32309958 taaacgatattgattcattcaaattgatagagtacatcgatataatataaattcaaagtcgttaaaaataaaaaagatgaatctgcgaacaaactcacaa 32309859  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  32309858 catccatgttaata 32309845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 33164128 - 33164241
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| || ||| |||||||||| |||||||||||||| ||||| |||||||||  |||||||  | |||||||||||||     
T  33164128 taaacgatattcattcattcaaattgacagagtacatcgatataatacaaattcaaatttgctaaaaacaaaagggatgaatccgtaaacaaactcacat 33164227  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  33164228 catccatgttaata 33164241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 392
Target Start/End: Complemental strand, 42781443 - 42781350
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||| |||||| | ||||||||||||||||||||||||| ||| |||| ||||| ||||||| ||  |||||||||||||||||| | ||||||    
T  42781443 aaattgatagagtgcatcgatacaatacaaattcaaagtcgctaaaaataaaaaggatgaatttgttaacaaactcacaacatccatgttaata 42781350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 15710979 - 15710878
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaac-aaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| ||||||||||||| ||||||| ||||||||      ||||||| ||||| ||||||||||| ||||||||||||||||||     
T  15710979 atattcattcattcaaattgatagaatacatcaatacaatgcaaattca------ctaaaaccaaaaaggatgaatatgcgaacaaactcacaacatcca 15710886  T
Q  385 tattaata 392  Q
    | ||||||    
T  15710885 tgttaata 15710878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 280 - 395
Target Start/End: Original strand, 42396169 - 42396285
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| ||||||||| ||||||||||||||||| |||| |  || |||||||||  ||| ||||||  |||||||||||||    
T  42396169 taaacgatattcattcattcaaattgatagaatatatcgatacaatacaaatccaaattcactaaaaacaaaagggattaatatgtgaacaaactcacaa 42396268  T
Q  379 catccgtattaataaca 395  Q
    ||| | | |||||||||    
T  42396269 cattcatgttaataaca 42396285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 6681536 - 6681639
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| ||  ||| |||||| |||||||||||||||||||| |||| ||||| |||||||||| ||||||| ||  |||||||| |||     
T  6681536 taaacgatattcattcattctaattgatagagtacatcgatacaatacaaatccaaatttgctaaaaacaaaaaggatgaatctgtgaacaaacttacat 6681635  T
Q  379 catc 382  Q
    ||||    
T  6681636 catc 6681639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 287 - 392
Target Start/End: Original strand, 26294740 - 26294846
Alignment:
Q  287 tattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgt 385  Q
    ||||||||| || |||| |||||| || |||||||||||||||||  ||| | ||||||| |||||||||||||| ||  |||||||||||| ||||| |    
T  26294740 tattcattcattcaaattgatagagtatatcgatacaatacaaatctaaattcgctaaaaacaaaaatgatgaatctgtgaacaaactcacatcatccat 26294839  T
Q  386 attaata 392  Q
     ||||||    
T  26294840 gttaata 26294846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 363
Target Start/End: Complemental strand, 28041085 - 28041007
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatg 363  Q
    |||||||||| || |||| |||||| || ||||||||||||||||| |||| ||||| |||||||||| ||||||||||    
T  28041085 atattcattcattcaaattgatagagtatatcgatacaatacaaatccaaatttgctaaaaacaaaaaggatgaatatg 28041007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 7151258 - 7151177
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaat 360  Q
    ||||| |||||||||| || ||||||||||| || || ||||||||||||||||||||| | | |||||||||| |||||||    
T  7151258 taaacgatattcattcattaaaatcgatagagtaaattgatacaatacaaattcaaagtcgttaaaaacaaaaaagatgaat 7151177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 305 - 377
Target Start/End: Complemental strand, 13677488 - 13677415
Alignment:
Q  305 gatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcaca 377  Q
    |||||| ||||||| ||||||||||||| ||| | ||||||| | |||||||||||| ||||||||||||||||    
T  13677488 gatagagtacatcgttacaatacaaatttaaaatcgctaaaaacgaaaatgatgaatctgcaaacaaactcaca 13677415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 392
Target Start/End: Complemental strand, 17699995 - 17699902
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||| |||||| ||||||||||||| |||||| |||| | ||||||| |||||| ||||||| ||  |||||||||||||||||| | ||||||    
T  17699995 aaattgatagagtacatcgatacaaaacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaacatccatgttaata 17699902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 23881775 - 23881888
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgc-taaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||  |||| ||||| ||||||| ||   ||||||||||||    
T  23881775 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgcaaaaaagaaaaaggatgaatttgtggacaaactcacaa 23881874  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  23881875 catccatgttaata 23881888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 39179504 - 39179617
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||| | |||||||||||||||||||| |||| | ||| ||||||||||  |||||| |   |||||||||||||    
T  39179504 taaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaagaatgaatttatgaacaaactcacaa 39179603  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  39179604 catccatgttaata 39179617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 383
Target Start/End: Complemental strand, 27241517 - 27241413
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||  || ||||  ||||| ||||||||||||||| ||||  ||| | ||||||| |||||| ||||||| ||| |||||||||||||    
T  27241517 taaactatattcattaattcaaattcatagagtacatcgatacaatagaaatctaaattcgctaaaaacaaaaaggatgaatctgcgaacaaactcacaa 27241418  T
Q  379 catcc 383  Q
    |||||    
T  27241417 catcc 27241413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 392
Target Start/End: Original strand, 39415958 - 39416038
Alignment:
Q  312 tacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    ||||||||||||||||| ||||||||| |||  || || || ||||||||| ||||||||||||||| |||| | ||||||    
T  39415958 tacatcgatacaatacatattcaaagtcgctggaaaaagaaggatgaatattcaaacaaactcacaaaatccattttaata 39416038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 313 - 383
Target Start/End: Complemental strand, 42609573 - 42609502
Alignment:
Q  313 acatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||||||||||||||||||| | ||| |||| ||||| ||||||| ||  ||||||||||||||||||    
T  42609573 acatcgatacaatacaaattcaaattcgctaaaaagaaaaaagatgaatttgtgaacaaactcacaacatcc 42609502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 6635710 - 6635612
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| || ||||||| || |||| |||||| ||||||||||||||| ||||||||| | | | |||||||||| ||||||| ||  ||||||||||||    
T  6635710 taaacgattttcattcattcaaattgatagagtacatcgatacaatataaattcaaattcgttaaaaacaaaaaggatgaatctgtgaacaaactcaca 6635612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 17732052 - 17732158
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatccgt 385  Q
    ||||||| || || |||| |||||| |||||||||||||||||||| |||| |  ||||||  |||  ||||||| ||  |||||||||||||||||| |    
T  17732052 atattcactcattcaaattgatagagtacatcgatacaatacaaatccaaattcactaaaaacaaagagatgaatctgtgaacaaactcacaacatccat 17732151  T
Q  386 attaata 392  Q
     ||||||    
T  17732152 gttaata 17732158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 383
Target Start/End: Complemental strand, 3740794 - 3740689
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatga-tgaatatgcaaacaaactcaca 377  Q
    ||||| |||||||||| || |||| |||||| ||||| |||||||| |||||||||| | ||||||| |||||| || ||||| |   ||||||||||||    
T  3740794 taaacgatattcattcattcaaattgatagagtacattgatacaatccaaattcaaattcgctaaaaacaaaaaggaatgaatctatgaacaaactcaca 3740695  T
Q  378 acatcc 383  Q
    ||||||    
T  3740694 acatcc 3740689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 305 - 392
Target Start/End: Original strand, 6647611 - 6647693
Alignment:
Q  305 gatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    ||||||||||||||||||||| |||||||      ||||||| |||||||||||||| ||| || ||||||||||||||| | ||||||    
T  6647611 gatagaatacatcgatacaatgcaaattc------gctaaaaacaaaaatgatgaatctgcgaataaactcacaacatccatgttaata 6647693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 34844299 - 34844250
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||||||||||||||  |||||||||||||||||| | ||||||    
T  34844299 aaaacaaaaatgatgaatatgtgaacaaactcacaacatccatgttaata 34844250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 449
Target Start/End: Complemental strand, 35402366 - 35402309
Alignment:
Q  392 aacaatcgagtatatatgcttacaaatatgactatacacaagtctctgtaatactgat 449  Q
    |||||| ||||| |||||| ||||||||||||||||  |||||||||| |||||||||    
T  35402366 aacaattgagtagatatgcctacaaatatgactatattcaagtctctggaatactgat 35402309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 473 - 509
Target Start/End: Complemental strand, 9406360 - 9406324
Alignment:
Q  473 gacaccaaagttattgattaaatttacacttgattaa 509  Q
    ||||||||||||||||||||||| |||||||||||||    
T  9406360 gacaccaaagttattgattaaatctacacttgattaa 9406324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 377
Target Start/End: Complemental strand, 29098236 - 29098144
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||||| || || |||| |||||||||||||| |||||||||||| |||| | ||| |||||||||  ||||||| ||  ||||||||||||    
T  29098236 atattcactcattcaaattgatagaatacatcggtacaatacaaatccaaattcgctaaaaacaaaagggatgaatttgtgaacaaactcaca 29098144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 540
Target Start/End: Complemental strand, 14535160 - 14535077
Alignment:
Q  457 gatctgcatcgttgatgacaccaaagttattgattaaatttacacttgattaaagtttaacttttaatctgaatcaaataaaca 540  Q
    |||||||| |||||||||| | ||||| ||||||| ||| |||||||||| ||||   | |||| |||| ||||||||||||||    
T  14535160 gatctgcaacgttgatgacgcaaaagtcattgattgaatctacacttgatcaaagccaatctttcaatccgaatcaaataaaca 14535077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 18654238 - 18654131
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| ||||| ||||||||| |||| |||| | ||||||| |||||| ||| ||| ||  |||||||||||| |||||     
T  18654238 atattcattcattcaaattgatagactacattgatacaatataaatccaaattcgctaaaaacaaaaaggataaatttgtgaacaaactcacagcatcca 18654139  T
Q  385 tattaata 392  Q
    | ||||||    
T  18654138 tgttaata 18654131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 26905314 - 26905421
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||| ||||| | ||||||||||||||| | | | ||| |||||||||||| ||||| ||  ||||||||| ||||||||     
T  26905314 atattcattcattaaaattgatataataccttgatacaatacaaatttatattcgctaaaaacaaaaatggtgaatgtgtgaacaaactcgcaacatcca 26905413  T
Q  385 tattaata 392  Q
    | ||||||    
T  26905414 tgttaata 26905421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 500
Target Start/End: Complemental strand, 35455354 - 35455311
Alignment:
Q  457 gatctgcatcgttgatgacaccaaagttattgattaaatttaca 500  Q
    |||||||| |||||||||||||||||||||||||| ||| ||||    
T  35455354 gatctgcaacgttgatgacaccaaagttattgattgaatctaca 35455311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 382
Target Start/End: Complemental strand, 37425505 - 37425466
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatc 382  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  37425505 aaaacaaaaatgatgaatatgtgaacaaactcacaacatc 37425466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 300 - 381
Target Start/End: Complemental strand, 13161787 - 13161705
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagt-tgctaaaacaaaaatgatgaatatgcaaacaaactcacaacat 381  Q
    |||| |||||| |||||| ||||||||||||||||||||    |||||||||||  |||||| ||| |||||||| |||||||    
T  13161787 aaattgatagagtacatcaatacaatacaaattcaaagtcatttaaaacaaaaagcatgaatctgctaacaaacttacaacat 13161705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 315 - 392
Target Start/End: Complemental strand, 23428670 - 23428592
Alignment:
Q  315 atcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||||||||||||||| | |||| |||| |||| ||| ||||||  |||||||||||| ||||| | ||||||    
T  23428670 atcgatacaatacaaattcaaattcgctataaacgaaaaggataaatatgtgaacaaactcacatcatccatgttaata 23428592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 345 - 395
Target Start/End: Complemental strand, 32387845 - 32387795
Alignment:
Q  345 aacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    |||||||| ||| ||| ||| |||||||||||||||||| |||||||||||    
T  32387845 aacaaaaaagataaatttgcgaacaaactcacaacatccatattaataaca 32387795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 324 - 392
Target Start/End: Original strand, 907649 - 907718
Alignment:
Q  324 atacaaattcaaagttgctaaa-acaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||| |||| | |||||| ||||||||||||||| ||  ||||||||||||| |||| ||||||||    
T  907649 atacaaatccaaattcgctaaacacaaaaatgatgaatttgtgaacaaactcacaatatccatattaata 907718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 7771480 - 7771593
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| || |||| |||| | ||||||||||||||||||||  ||| | ||| |||||||||| ||||||| ||  ||||| ||||||     
T  7771480 taaacgatatttattcattcaaattgatatagtacatcgatacaatacaaatctaaattcgctaaaaacaaaaaggatgaatctgtgaacaagctcacat 7771579  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  7771580 catccatgttaata 7771593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 29154603 - 29154554
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||||||||||||||| |||| ||||||| ||||| | ||||||    
T  29154603 aaaacaaaaatgatgaatatgcgaacatactcacatcatccatgttaata 29154554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 32347382 - 32347495
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| || ||  |||||||||||||||| |||||||| | ||| |||||||||  ||||||| ||  ||||||||||  |    
T  32347382 taaacgatattcattcattcaaattgacagtgtacatcgatacaatacgaattcaaattcgctaaaaacaaaatggatgaatctgtgaacaaactcaata 32347481  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  32347482 catccatgttaata 32347495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 34866813 - 34866765
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||| ||||||||||| |||||||||||||||||| | ||||||    
T  34866813 aaaacaaaaa-gatgaatatgcgaacaaactcacaacatccatgttaata 34866765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 4e-22; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 281 - 382
Target Start/End: Original strand, 24988160 - 24988262
Alignment:
Q  281 aaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||||||||||||||||   |||||| |||||||    
T  24988160 aaacaatattcattcatttaaattgatagaatacatcgatataatacaaatccaaattcgctaaaaacaaaaatgatgaatatatgaacaaaatcacaac 24988259  T
Q  380 atc 382  Q
    |||    
T  24988260 atc 24988262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 21991124 - 21991011
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||||||  |||||||||||||    
T  21991124 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatatgtgaacaaactcacaa 21991025  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  21991024 catccatgttaata 21991011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 280 - 383
Target Start/End: Original strand, 24319882 - 24319986
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| ||||||| |||||| ||||||||||||||||||||  ||| | ||| |||||||||| ||||||||||  |||||||||||||    
T  24319882 taaacgatattcattcatttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaacaaaaaagatgaatatgtgaacaaactcacaa 24319981  T
Q  379 catcc 383  Q
    |||||    
T  24319982 catcc 24319986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 17508869 - 17508976
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||  ||| | ||| |||||||||| ||||||| ||  ||||||||||||||||||     
T  17508869 atattcattcttttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaacatcca 17508968  T
Q  385 tattaata 392  Q
    | ||||||    
T  17508969 tgttaata 17508976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 17544345 - 17544238
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||  ||| | ||| |||||||||| ||||||| ||  ||||||||||||||||||     
T  17544345 atattcattcttttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaacatcca 17544246  T
Q  385 tattaata 392  Q
    | ||||||    
T  17544245 tgttaata 17544238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 11833480 - 11833367
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||||  | | ||| |||||||||| ||||||| ||  |||||||||||||    
T  11833480 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcgcattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaa 11833381  T
Q  379 catccgtattaata 392  Q
    ||||| ||||||||    
T  11833380 catccatattaata 11833367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 36253392 - 36253279
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||| |||||| || |||| |||||| |||||||||||||||||||| |||| ||||| |||||||||| || |||| ||  |||||||||||||    
T  36253392 taaacgatactcattcattcaaattgatagagtacatcgatacaatacaaatccaaatttgctaaaaacaaaaaggaagaatctgtgaacaaactcacaa 36253293  T
Q  379 catccgtattaata 392  Q
    ||||||| ||||||    
T  36253292 catccgtgttaata 36253279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 45457215 - 45457328
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||||||||| |||| || |||| |||||| |||||||| ||| |||||||||||| | ||| |||||||||| ||||||| ||  |||||||||||||    
T  45457215 taaacaatattgattcattcaaattgatagagtacatcgacacagtacaaattcaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaa 45457314  T
Q  379 catccgtattaata 392  Q
    ||||| ||||||||    
T  45457315 catccatattaata 45457328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 280 - 540
Target Start/End: Complemental strand, 37714926 - 37714658
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagtt-gctaaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| ||||||| ||  ||  |||| ||||||||||||||||||||||    |||| ||||| ||||||||||| |||||||||||||    
T  37714926 taaacgatattcattcatttaaattgaccgagcacattgatacaatacaaattcaaagttaagaaaaataaaaaagatgaatatgcgaacaaactcacaa 37714827  T
Q  379 catccgtattaat-------aacaatcgagtatatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttga 471  Q
    ||||| | | |||       |||||  |||||||||||| ||||||||||||||||  ||   | | | |||||| || ||||| ||| |||| ||||||    
T  37714826 catccatgtaaataacataaaacaaaagagtatatatgcctacaaatatgactatattcacaccaccgaaatactcatgttttcggatttgcaacgttga 37714727  T
Q  472 tgacaccaaagttattgattaaatttacacttgattaaagtttaacttttaatctgaatcaaataaaca 540  Q
     |||   || |||||||||| ||| | |||||||| ||| || | |||| || ||||||||||||||||    
T  37714726 cgacgtaaatgttattgattgaatctgcacttgatcaaaattaatctttcaacctgaatcaaataaaca 37714658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 6667857 - 6667744
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| ||||||  |||||||||||||||||||||||| | ||| |||||||||| ||||||| |   |||||||||||||    
T  6667857 taaacgatattcattcattcaaattgatagagcacatcgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatctatgaacaaactcacaa 6667758  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  6667757 catccatgttaata 6667744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 380
Target Start/End: Complemental strand, 8180263 - 8180162
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||  ||||||||||||| |||| | ||||||| |||||||||||||||||  |||||||||||||    
T  8180263 taaacgatattcattcattcaaattgatagagtacattcatacaatacaaatccaaattcgctaaaaacaaaaatgatgaatatgtgaacaaactcacaa 8180164  T
Q  379 ca 380  Q
    ||    
T  8180163 ca 8180162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 286 - 378
Target Start/End: Original strand, 26771193 - 26771288
Alignment:
Q  286 atattcattcttttaaatcgataga--atacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||||||| ||||| | ||||||  |||| | ||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  26771193 atattcattcatttaagttgatagagtatactttgatacaatataaattcaaagtcggtaaaaacaaaaatgatgaatatgcaaacaaactcacaa 26771288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 31254796 - 31254856
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa 346  Q
    |||||||||| || |||| |||||| |||||||||||||||||||||||||||||||||||    
T  31254796 atattcattcattcaaattgatagattacatcgatacaatacaaattcaaagttgctaaaa 31254856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 6622846 - 6622743
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||  ||||||||| ||||||||||||||||| |||| ||| | |||| |||||  |||||| |||||||||||||||||    
T  6622846 taaacgatattcattcattcaaactgatagaatatatcgatacaatacaaatacaaaattgttcaaaataaaaaccatgaatctgcaaacaaactcacaa 6622747  T
Q  379 catc 382  Q
    ||||    
T  6622746 catc 6622743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 280 - 383
Target Start/End: Complemental strand, 10624244 - 10624141
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    ||||| |||||||||| ||||||| |||    ||||||||||||| ||||||| ||||||| |||||  |||| ||||||| |||||||||||||||| |    
T  10624244 taaacgatattcattcatttaaattgattatgtacatcgatacaagacaaattaaaagttgttaaaaacaaaaggatgaatctgcaaacaaactcacatc 10624145  T
Q  380 atcc 383  Q
    ||||    
T  10624144 atcc 10624141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 282 - 392
Target Start/End: Complemental strand, 14762477 - 14762366
Alignment:
Q  282 aacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaaca 380  Q
    ||||||||| |||| || |||| |||||| ||||| ||||| ||||||||||||||| |||| |||||| |  ||||||| |||||||||||||| ||||    
T  14762477 aacaatatttattcattcaaattgatagattacattgatactatacaaattcaaagtcgctataaacaacacagatgaatttgcaaacaaactcataaca 14762378  T
Q  381 tccgtattaata 392  Q
    ||| | ||||||    
T  14762377 tccattttaata 14762366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 17473426 - 17473533
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    ||||||||||||| |||| |||||| ||||||| ||||||||||||  ||| | ||| |||||||||| ||||||| ||  ||||||||||||||||||     
T  17473426 atattcattctttcaaattgatagagtacatcggtacaatacaaatctaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaacatcca 17473525  T
Q  385 tattaata 392  Q
    | ||||||    
T  17473526 tgttaata 17473533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 17579788 - 17579681
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    ||||||||||||| |||| |||||| ||||||| ||||||||||||  ||| | ||| |||||||||| ||||||| ||  ||||||||||||||||||     
T  17579788 atattcattctttcaaattgatagagtacatcggtacaatacaaatctaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaacatcca 17579689  T
Q  385 tattaata 392  Q
    | ||||||    
T  17579688 tgttaata 17579681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 32587201 - 32587311
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||||||||||||| || |||| ||| || |||||   |||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||||||||    
T  32587201 taaacaatattcattcattcaaattgatcgagtacat---tacaatacaatttcaaagtcactaaaaacaaaaaggatgaatatgcgaacaaactcacaa 32587297  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  32587298 catccatgttaata 32587311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 300 - 392
Target Start/End: Original strand, 7765557 - 7765650
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||| |||||| |||||||||||||||||||||||||||  || |||| ||| | ||| ||||||| |||||| ||||||||||| ||||||||    
T  7765557 aaattgatagagtacatcgatacaatacaaattcaaagtatctaaaaataaataggataaatatgcgaacaaattcacaacatccatattaata 7765650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 27535889 - 27535777
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttg-ctaaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| ||||||| |||||| |||||||||||||||||||| |||| | | | ||||||| || ||||||||||  |||||||||||||    
T  27535889 taaacgatatttattcatttaaattgatagagtacatcgatacaatacaaatacaaattcgtcaaaaacaacaaggatgaatatg-taacaaactcacaa 27535791  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  27535790 catccatgttaata 27535777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 37593545 - 37593432
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| ||| || ||||||||||||||||||||  ||| | ||| |||||||||||||||||| ||  |||||||||||||    
T  37593545 taaacgatattcattcattcaaattgatggagtacatcgatacaatacaaatctaaattcgctaaaaacaaaaatgatgaatctgtgaacaaactcacaa 37593446  T
Q  379 catccgtattaata 392  Q
     |||| | ||||||    
T  37593445 tatccatgttaata 37593432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 38273351 - 38273238
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||||||||| |||| ||||||| || ||| ||||| ||||||||| |||| ||||||   ||||| |||||| ||||||| ||| |||||||||||||    
T  38273351 taaacaatatttattcatttaaattgacagagtacattgatacaatataaatccaaagtccttaaaaacaaaaaggatgaatttgctaacaaactcacaa 38273252  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  38273251 catccatgttaata 38273238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 41288418 - 41288305
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||| ||| || |||| |||||| ||||||||||||||||||||||||| |  || |||||||||| ||||||| ||  ||||||||||||     
T  41288418 taaacgatattctttcattcaaattgatagagtacatcgatacaatacaaattcaaattcactaaaaacaaaaaggatgaatctgtgaacaaactcacat 41288319  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  41288318 catccatgttaata 41288305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 45482514 - 45482404
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    ||||| ||||| |||| || |||| |||||| |||||||||||||||||||| |||| | ||||||  ||||| ||||||| ||  ||||||||||||||    
T  45482514 taaacgatattaattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaa--aaaaaggatgaatctgtgaacaaactcacaac 45482417  T
Q  380 atccgtattaata 392  Q
    |||| | ||||||    
T  45482416 atccatgttaata 45482404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 10094902 - 10094799
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| || ||  |||||||| ||||||||| ||||||||| |||||| ||||||| ||  |||||||||||||    
T  10094902 taaacgatattcattcattcaaattgatagagtatattaatacaatagaaattcaaatttgctaaaaacaaaaaggatgaatctgtgaacaaactcacaa 10094803  T
Q  379 catc 382  Q
    ||||    
T  10094802 catc 10094799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 15674028 - 15674135
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| ||| || |||||||||| |||||||||||||| |  || ||||| ||||  |||||||||  ||||||||||||||||||     
T  15674028 atattcattcattcaaattgattgagtacatcgataaaatacaaattcaaattcactaaaaacgaaaagaatgaatatgtgaacaaactcacaacatcca 15674127  T
Q  385 tattaata 392  Q
    ||||||||    
T  15674128 tattaata 15674135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 382
Target Start/End: Original strand, 42603438 - 42603541
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| || ||||||| || |||| |||||| ||||||||||||||| ||||||||| | ||| |||||||||  ||||||| ||  |||||||||||||    
T  42603438 taaacgatgttcattcattcaaattgatagagtacatcgatacaatataaattcaaattcgctaaaaacaaaacggatgaatctgtgaacaaactcacaa 42603537  T
Q  379 catc 382  Q
    ||||    
T  42603538 catc 42603541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 42645111 - 42645004
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| |||||||||||||||||| |  ||| | ||| |||||||||| ||||||| ||  ||||||||||||||||||     
T  42645111 atattcattcattcaaattgatagagtacatcgatacaatacaagtctaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaacatcca 42645012  T
Q  385 tattaata 392  Q
    | ||||||    
T  42645011 tgttaata 42645004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 280 - 381
Target Start/End: Original strand, 4621039 - 4621141
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||| ||||| |||| | | | |||||||||| ||||||| ||  |||||||||||||    
T  4621039 taaacgatattcattcattcaaattgatagagtacatcgatacaattcaaatccaaattcgttaaaaacaaaaaggatgaatctgttaacaaactcacaa 4621138  T
Q  379 cat 381  Q
    |||    
T  4621139 cat 4621141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 35134881 - 35134984
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatccgt 385  Q
    |||||||||| || ||||| ||| | |||||||||||||| ||||||||      ||||||  |||||||||||| ||| |||||||||||||||||| |    
T  35134881 atattcattcattcaaatcaatatagtacatcgatacaatgcaaattca------ctaaaaataaaatgatgaatctgcgaacaaactcacaacatccat 35134974  T
Q  386 attaataaca 395  Q
    | ||||||||    
T  35134975 actaataaca 35134984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 9785779 - 9785666
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatg-atgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||  |||||||||||||||||||| |||| |||||||||   ||||| |||||| ||  ||||||||||||     
T  9785779 taaacgatattcattcattcaaattgatagggtacatcgatacaatacaaatccaaatttgctaaaaactaaatgaatgaatttgtgaacaaactcacat 9785680  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  9785679 catccatgttaata 9785666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 22747168 - 22747281
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| || |||| |||||| ||||||||||||||| ||||||||| || || |||||||||| ||||| | ||  ||||||||||||     
T  22747168 taaacgatattgattcattcaaattgatagagtacatcgatacaatataaattcaaatttactaaaaacaaaaaggatgattctgtgaacaaactcacat 22747267  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  22747268 catccatgttaata 22747281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 36719225 - 36719333
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa--caaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||||| || |||| |||||| | |||||||||||||||||| |||| | |||||||   ||||| ||||||| ||  ||||||||||||||||||    
T  36719225 atattcattcattcaaattgatagagtgcatcgatacaatacaaatccaaattcgctaaaaacaaaaaaggatgaatttgtgaacaaactcacaacatcc 36719324  T
Q  384 gtattaata 392  Q
     | ||||||    
T  36719325 atgttaata 36719333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 37375715 - 37375827
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||| |||||||||||||| |||| | ||||||| |||||  ||||||||||  ||||||||||||     
T  37375715 taaacgatattcattcattcaaattgatagagtacat-gatacaatacaaatccaaattcgctaaaaacaaaagggatgaatatgtgaacaaactcacag 37375813  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  37375814 catccatgttaata 37375827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 46025714 - 46025827
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||| | |||||||||||||||||||| |||| | ||| |||||||||| ||||||| |   ||||||||||||     
T  46025714 taaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctttgaacaaactcacag 46025813  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  46025814 catccatgttaata 46025827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 48304051 - 48304164
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||| | |||||||||||||||||||| |||  |  || |||||||||| ||||||||||  |||||||||| ||    
T  48304051 taaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaatttcactaaaaacaaaaaggatgaatatgtgaacaaactcataa 48304150  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  48304151 catccatgttaata 48304164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 772878 - 772777
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| ||||||| |||||| |||||||||||||| |||||||      ||| |||||||||| ||||||||||| ||||| ||||||| ||||     
T  772878 atattcattcatttaaattgatagagtacatcgatacaatgcaaattc------gctaaaaacaaaaaggatgaatatgcgaacaagctcacaatatcca 772785  T
Q  385 tattaata 392  Q
    | ||||||    
T  772784 tgttaata 772777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 286 - 377
Target Start/End: Complemental strand, 43847429 - 43847337
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    |||||||||| || |||| |||||| || ||||||||||||||||| |||| | ||| |||||||||| ||||||||||  || |||||||||    
T  43847429 atattcattcattcaaattgatagagtatatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatatgtgaataaactcaca 43847337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 321 - 395
Target Start/End: Original strand, 39544751 - 39544823
Alignment:
Q  321 acaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    |||||||||||||||||| |||||||  |||| ||||||| ||| ||||||||||||| |||| | |||||||||    
T  39544751 acaatacaaattcaaagtcgctaaaa--aaaaggatgaatctgcgaacaaactcacaatatccatgttaataaca 39544823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 381
Target Start/End: Complemental strand, 2623054 - 2622952
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||| ||| |||| ||||  ||| ||| ||||| |||||||||||||| ||  |||||||||||||    
T  2623054 taaacgatattcattcattcaaattgatagagtacatctatataatataaatctaaatttgataaaaacaaaaatgatgaatctgtgaacaaactcacaa 2622955  T
Q  379 cat 381  Q
    |||    
T  2622954 cat 2622952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 3266836 - 3266738
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    |||||||||||||||| || |||| |||| | ||||| ||||||||||||||||||| | | | |||||||||| ||||||| |   ||||||||||||    
T  3266836 taaacaatattcattcattcaaattgataaagtacattgatacaatacaaattcaaattcgttaaaaacaaaaaggatgaatctatgaacaaactcaca 3266738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 377
Target Start/End: Original strand, 28664635 - 28664713
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    |||| |||||| |||||||||||||| |||||||||| | ||| |||||||||| ||||||| ||  ||||||||||||    
T  28664635 aaattgatagattacatcgatacaatgcaaattcaaattcgctaaaaacaaaaaggatgaatttgtgaacaaactcaca 28664713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 381
Target Start/End: Complemental strand, 38277259 - 38277157
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||| ||||| ||| |||| | ||||  |||||| |||||||||||||| ||| |||||||| ||||    
T  38277259 taaacgatattcattcattcaaattgatagagtacattgatacgatataaatcccaagtccctaaaaacaaaaatgatgaatctgctaacaaacttacaa 38277160  T
Q  379 cat 381  Q
    |||    
T  38277159 cat 38277157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 381
Target Start/End: Original strand, 38338863 - 38338944
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacat 381  Q
    |||| ||||||||| |||||||||||| ||||||||||||| | ||||||||||  ||||||||   ||||||||||||||||    
T  38338863 aaatagatagaata-atcgatacaatataaattcaaagttgttaaaaacaaaaagaatgaatatatgaacaaactcacaacat 38338944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 280 - 377
Target Start/End: Original strand, 39532634 - 39532732
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| ||||| |||| || |||| |||||| |||| |||||||||||||||||||| | ||| |||||||||| ||| ||| ||  ||||||||||||    
T  39532634 taaacgatattaattcattcaaattgatagagtacaccgatacaatacaaattcaaattcgctaaaaacaaaaaggataaatgtgtgaacaaactcaca 39532732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 40016569 - 40016650
Alignment:
Q  296 ttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||||| |||| | || ||||||| |||||||||||||||||| | ||| ||||||||||||| ||| || ||||||||||    
T  40016569 ttttaaattgataaagtatatcgatataatacaaattcaaagttg-ttaaagaaaaatgatgaatctgcgaataaactcacaa 40016650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 392
Target Start/End: Complemental strand, 9137383 - 9137290
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||| |||||| | ||||||  || |||||||||||||||||| |||||||||| ||||||| | | |||||||||||| ||||| | ||||||    
T  9137383 aaattgatagagtgcatcgacccagtacaaattcaaagttgctaaaaacaaaaaggatgaatttacgaacaaactcacatcatccatgttaata 9137290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 14810891 - 14810826
Alignment:
Q  319 atacaatacaaattcaaagttgctaaaac-aaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||||||||  ||| |||||||||  ||||||||||||||||  ||||||||||||||||||    
T  14810891 atacaatacaaatagaaaattgctaaaaataaaaatgatgaatatgtgaacaaactcacaacatcc 14810826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 15257886 - 15257821
Alignment:
Q  319 atacaatacaaattcaaagttgctaaaac-aaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||||||||  ||| |||||||||  ||||||||||||||||  ||||||||||||||||||    
T  15257886 atacaatacaaatagaaaattgctaaaaataaaaatgatgaatatgtgaacaaactcacaacatcc 15257821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 395
Target Start/End: Complemental strand, 23274669 - 23274580
Alignment:
Q  307 tagaatacatcgatacaatacaaattcaaagttgctaaaac-aaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    |||| ||||| ||||||||| ||||||||||  |||||||| ||||||||||||| |  ||||||| ||||||||||  | |||||||||    
T  23274669 tagattacattgatacaatataaattcaaaggagctaaaactaaaaatgatgaatttcgaaacaaattcacaacatcaatgttaataaca 23274580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 32741205 - 32741092
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||  || |||| |||||| || |||||||||||||||||  ||| |  || |||||||||| ||||||| ||  |||||||||||||    
T  32741205 taaacgatattcatttattcaaattgatagagtatatcgatacaatacaaatctaaattcactaaaaacaaaaaggatgaatctgtgaacaaactcacaa 32741106  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  32741105 catccatgttaata 32741092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 36579000 - 36579113
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||  ||| |||| ||||||||| | ||||||| |||||| ||||||| ||  ||||||||||||     
T  36579000 taaacgatattcattcgttcaaattgatagagtacattaatataatataaattcaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacat 36579099  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  36579100 catccatgttaata 36579113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 38649089 - 38649138
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||| ||||||||||| |||||||||||||||||| | ||||||    
T  38649089 aaaacaaaaaggatgaatatgcgaacaaactcacaacatccatgttaata 38649138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 540
Target Start/End: Complemental strand, 29352545 - 29352405
Alignment:
Q  400 agtatatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttgatgacaccaaagttattgattaaatttac 499  Q
    |||| |||||| ||||||||||||||||  ||||||| || |||||| || | | | |||||||| |||||| ||| | ||||| ||||||  ||| |||    
T  29352545 agtacatatgcctacaaatatgactatattcaagtctttggaatactcatctctccggatctgcaacgttgacgacgcaaaagtcattgatcgaatctac 29352446  T
Q  500 acttgattaaagtttaacttttaatctgaatcaaataaaca 540  Q
    |||||   |||| | | |||| || ||||||||||||||||    
T  29352445 acttgcacaaagctaatctttcaacctgaatcaaataaaca 29352405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 336
Target Start/End: Original strand, 33095795 - 33095851
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaa 336  Q
    ||||| |||||||||| || ||||||||| |||||||||||| ||| ||||||||||    
T  33095795 taaacgatattcattcattcaaatcgataaaatacatcgatataattcaaattcaaa 33095851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 280 - 381
Target Start/End: Original strand, 33901986 - 33902089
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct--aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| ||||||||||  |||||| ||||||||| || ||||||||||| |||||||| |  |  |||||||||| ||| ||| ||| || |||||||||    
T  33901986 taaacgatattcattcacttaaattgatagaatatattgatacaatacacattcaaaggtcgttaaaaacaaaaaggattaatttgcgaataaactcaca 33902085  T
Q  378 acat 381  Q
    ||||    
T  33902086 acat 33902089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 370
Target Start/End: Complemental strand, 20206248 - 20206157
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaa 370  Q
    ||||| |||||||||| || |||| || ||| ||||||||||||| |||||||||||||  || ||||||||||  |||||| ||| |||||    
T  20206248 taaacgatattcattcattcaaattgacagagtacatcgatacaacacaaattcaaagtatctaaaaacaaaaagaatgaatctgcgaacaa 20206157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 21603914 - 21603807
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| |||||| |||||||||||||||||| |   | |||| ||||| | ||||| ||  ||||||||||||||||||     
T  21603914 atattcattcattcaaattgatagagtacatcaatacaatacaaattcaaattcattaaaaagaaaaagggtgaatctgtgaacaaactcacaacatcca 21603815  T
Q  385 tattaata 392  Q
    | ||||||    
T  21603814 tgttaata 21603807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 383
Target Start/End: Original strand, 28314349 - 28314384
Alignment:
Q  348 aaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    ||||| ||||||||||||||||||||||||||||||    
T  28314349 aaaaaggatgaatatgcaaacaaactcacaacatcc 28314384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 39989854 - 39989963
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaa---acaaaaatgatgaatatgcaaacaaactcacaacatc 382  Q
    |||||||| | || |||| |||||| ||| || |||||||| ||||| ||||||||||||   | ||||| ||||||  ||||||||| |||||||||||    
T  39989854 atattcatgcattcaaattgatagagtacgtcaatacaatataaatttaaagttgctaaaaataaaaaaaggatgaacctgcaaacaagctcacaacatc 39989953  T
Q  383 cgtattaata 392  Q
    | | ||||||    
T  39989954 catgttaata 39989963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 395
Target Start/End: Complemental strand, 5238390 - 5238280
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    ||||| |||| || |||| || ||| |||||| |||||||||||||||||| | | | |||| ||||| ||||||| ||  |||||||||||| |||||     
T  5238390 atatttattcattcaaattgacagagtacatccatacaatacaaattcaaaatcgttaaaaataaaaaggatgaatttgagaacaaactcacatcatcca 5238291  T
Q  385 tattaataaca 395  Q
    | |||||||||    
T  5238290 tgttaataaca 5238280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 25112949 - 25112851
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| ||| |||||| || |||  |||||| ||||||||||||||| ||| ||||||| ||| |||| ||||| ||||||| | | ||||||||||||    
T  25112949 taaacgatagtcattcattcaaaatgatagagtacatcgatacaatataaaatcaaagtcgctaaaaataaaaaagatgaatctacgaacaaactcaca 25112851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 26161409 - 26161304
Alignment:
Q  287 tattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgt 385  Q
    |||| |||| || |||| |||||| || ||||||| |||||||||||||| | ||||||| |||||| ||||||| ||  |||||||||||| ||||| |    
T  26161409 tatttattcattcaaattgatagagtatatcgata-aatacaaattcaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacatcatccat 26161311  T
Q  386 attaata 392  Q
     ||||||    
T  26161310 gttaata 26161304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 624 - 670
Target Start/End: Complemental strand, 31724644 - 31724599
Alignment:
Q  624 attttggatcaaaattgaccctaaatcatccatcttcgatagatcaa 670  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  31724644 attttcgatcaaaattgaccttaaatcatccatctt-gatagatcaa 31724599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 43398771 - 43398693
Alignment:
Q  318 gatacaatacaaattcaaagttgctaaaacaaaaat-gatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    ||||||||||||||||||||| |||||||  ||||| ||||||| | | |||||||||| ||||| | | |||||||||    
T  43398771 gatacaatacaaattcaaagtcgctaaaaataaaatagatgaatctaccaacaaactcataacattcatgttaataaca 43398693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 5024787 - 5024836
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||||||||||| ||  |||||||||||||||||| | ||||||    
T  5024787 aaaacaaaaatgatgaatctgtgaacaaactcacaacatccatgttaata 5024836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 34594253 - 34594302
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||||||||||| ||||||  |||||||||||||||||| | ||||||    
T  34594253 aaaacaaaaatgattaatatgtgaacaaactcacaacatccatgttaata 34594302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 288 - 392
Target Start/End: Original strand, 626226 - 626331
Alignment:
Q  288 attcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgta 386  Q
    |||||||| || |||| |||||| ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||  ||||| |||||||||||| |     
T  626226 attcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaacaaaaaggatgaatatgtgaacaagctcacaacatccatg 626325  T
Q  387 ttaata 392  Q
    ||||||    
T  626326 ttaata 626331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 280 - 383
Target Start/End: Complemental strand, 42198015 - 42197911
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||||||||||||| ||||| |||||||||| |||| || ||  |||||||||||||    
T  42198015 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaacaaaaaggatggatctgtgaacaaactcacaa 42197916  T
Q  379 catcc 383  Q
    |||||    
T  42197915 catcc 42197911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 477680 - 477793
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || ||||||||||| ||||| |||||| |||||||||||| | ||| |||||||||| ||||||| ||  |||||||||||||    
T  477680 taaacgatattcattcattcaaatcgatagagtacattgatacagtacaaattcaaattcgctaaaaacaaaaacgatgaatctgtgaacaaactcacaa 477779  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  477780 catccatgttaata 477793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 3159424 - 3159311
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||| | |||||||||||||||||||||||||||  || |||||||||| ||||||| ||||||||| |||||||    
T  3159424 taaactatattcattcattcaaattgataaagtacatcgatacaatacaaattcaaagtcactaaaaacaaaaaggatgaatctgcaaacaatctcacaa 3159325  T
Q  379 catccgtattaata 392  Q
     |||| | ||||||    
T  3159324 tatccatgttaata 3159311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 20887416 - 20887529
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| ||||||| |||||| ||||||||||||||| |||| |||| | ||| |||||||||| ||||||| ||  |||||||||||||    
T  20887416 taaacgatattcattcatttaaattgatagagtacatcgatacaatataaatccaaattcgctaaaaacaaaaaagatgaatctgtgaacaaactcacaa 20887515  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  20887516 catccatgttaata 20887529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 36124016 - 36124129
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||||||||||| |||| |||||| | |||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  |||||||||||||    
T  36124016 taaacgatattcattctttcaaattgatagagtccatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaa 36124115  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  36124116 catccatgttaata 36124129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 43244040 - 43244153
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||| ||||||||||||||| |||| | ||| |||||||||| ||||||| || ||||||||||||||    
T  43244040 taaacgatattcattcattcaaattgatagagtacaccgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtaaacaaactcacaa 43244139  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  43244140 catccatgttaata 43244153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 488
Target Start/End: Complemental strand, 6882406 - 6882193
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| |   |||||||||||||    
T  6882406 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctctgaacaaactcacaa 6882307  T
Q  379 catccgtattaataacaatcg----agtatatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttgatga 474  Q
    ||||| || ||  |  || ||    ||||| ||||  ||||||||||||||||  ||||||||||| ||||| || | | | |||||||| |||||| ||    
T  6882306 catccataatagcataaaacggcaaagtatttatgtctacaaatatgactatattcaagtctctgttatactcatgtctccggatctgcaacgttgacga 6882207  T
Q  475 caccaaagttattg 488  Q
    |  |||||||||||    
T  6882206 cgacaaagttattg 6882193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 286 - 381
Target Start/End: Original strand, 24568380 - 24568476
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacat 381  Q
    |||||||||| || |||| |||||| ||||||||||||||| ||||||||| | ||| |||||||||| ||||||||||  ||||||||||||||||    
T  24568380 atattcattcattcaaattgatagattacatcgatacaatataaattcaaattcgctaaaaacaaaaaggatgaatatgtgaacaaactcacaacat 24568476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 395
Target Start/End: Original strand, 45350729 - 45350845
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| | ||||| ||  |||||||||||||    
T  45350729 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaagggtgaatctgtgaacaaactcacaa 45350828  T
Q  379 catccgtattaataaca 395  Q
    ||||| | |||||||||    
T  45350829 catccatgttaataaca 45350845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 395
Target Start/End: Original strand, 45360208 - 45360324
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| | ||||| ||  |||||||||||||    
T  45360208 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaagggtgaatctgtgaacaaactcacaa 45360307  T
Q  379 catccgtattaataaca 395  Q
    ||||| | |||||||||    
T  45360308 catccatgttaataaca 45360324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 280 - 394
Target Start/End: Complemental strand, 37431618 - 37431503
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||| ||||||||||| |||||| || |||||||||||||||||||||| ||||| |||| |||| |||||||| ||  ||| || ||||||    
T  37431618 taaacgatattctttcttttaaattgatagagtatatcgatacaatacaaattcaaaattgctaaaaataaaactgatgaatctgtgaacgaattcacaa 37431519  T
Q  379 catccgtattaataac 394  Q
    ||||| | ||||||||    
T  37431518 catccatgttaataac 37431503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 280 - 377
Target Start/End: Original strand, 18502501 - 18502599
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| |||||||||| ||||||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  ||||||||||||    
T  18502501 taaacgatattcattcatttaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcaca 18502599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 7060776 - 7060663
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||| |||||||||||||| |||| | ||| |||||||||| |||||| |||  |||||||||||||    
T  7060776 taaacgatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaaaatgtgaacaaactcacaa 7060677  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  7060676 catccatgttaata 7060663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 31522408 - 31522295
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||| | |||| | ||| |||||||||| ||||||| ||  |||||||||||||    
T  31522408 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaagtccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacaa 31522309  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  31522308 catccttgttaata 31522295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 281 - 540
Target Start/End: Complemental strand, 31932708 - 31932441
Alignment:
Q  281 aaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    |||| |||||||||| || |||| |||| | |||||||| |||||||||||||||| | | | ||||||||||  |||||||||| |||||||||| |||    
T  31932708 aaacgatattcattcattcaaattgataaagtacatcgacacaatacaaattcaaaatcgttaaaaacaaaaagtatgaatatgcgaacaaactcataac 31932609  T
Q  380 atccgtattaat-------aacaatcgagtatatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttgat 472  Q
    |||| | |||||       |||||| ||||| |||||| ||||||||||| ||||  |||| ||    |||||| || ||| | | |||| | |||||||    
T  31932608 atccatgttaatagcataaaacaatagagtacatatgcctacaaatatgattatattcaagccttcaaaatactcatgtttccggttctgtaacgttgat 31932509  T
Q  473 gacaccaaagttattgattaaatttacacttgattaaagtttaacttttaatctgaatcaaataaaca 540  Q
    ||||| ||| | ||||||| ||| |||||||||| |||  | | ||||| |  |||||||||||||||    
T  31932508 gacacaaaattcattgattgaatctacacttgatcaaaactaatctttttacatgaatcaaataaaca 31932441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 56062436 - 56062323
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||| ||||||||||| || |||| |||| | |||||  |||||||||||||||||||| ||| |||||||||| ||| ||||| | |||||||| ||||    
T  56062436 taaataatattcattcattaaaattgatatagtacattcatacaatacaaattcaaagtcgctaaaaacaaaaaggattaatatacgaacaaacttacaa 56062337  T
Q  379 catccgtattaata 392  Q
    ||||| ||||||||    
T  56062336 catccatattaata 56062323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 305 - 540
Target Start/End: Complemental strand, 5814768 - 5814525
Alignment:
Q  305 gatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaata----acaatcg 399  Q
    |||||| |||||| |||||||||||||||||| | |||||||  ||||| ||||||| ||  |||||||||||||||||| | ||||||    | ||| |    
T  5814768 gatagagtacatcaatacaatacaaattcaaattagctaaaagaaaaaaggatgaatctgtgaacaaactcacaacatccatgttaatagcataaaatgg 5814669  T
Q  400 ---agtatatatgcttacaaatatgactatacacaagtctctgtaatactgatattttctgatctgcatcgttgatgacaccaaagttattgattaaatt 496  Q
       ||||| ||||| ||||||||||||||||  ||||||||   |||||| || | |   |||||||| |||||||||| ||||||| ||||||  |||     
T  5814668 aaaagtatttatgcctacaaatatgactatattcaagtctccagaatactcatgtctctggatctgcaacgttgatgacgccaaagtcattgatcgaatc 5814569  T
Q  497 tacacttgattaaagtttaacttttaatctgaatcaaataaaca 540  Q
    | |||||| | |||| | | |||| || ||||||||||||||||    
T  5814568 tgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 5814525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 305 - 392
Target Start/End: Complemental strand, 22757521 - 22757434
Alignment:
Q  305 gatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||||| |||||||||||||||||||| |||| | ||||||| ||||| ||||||| ||  |||||||||||||||||| | ||||||    
T  22757521 gatagagtacatcgatacaatacaaatccaaattcgctaaaaaaaaaaggatgaatctgtgaacaaactcacaacatccatgttaata 22757434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 287 - 392
Target Start/End: Complemental strand, 6912135 - 6912029
Alignment:
Q  287 tattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgt 385  Q
    ||||||||| || |||| |||||| |||||| |||||||||||||||||| | ||| |||||||||| ||||||| ||  |||||||||||| ||||| |    
T  6912135 tattcattcattcaaattgatagagtacatcaatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacatcatccat 6912036  T
Q  386 attaata 392  Q
     ||||||    
T  6912035 gttaata 6912029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 7083480 - 7083593
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||||||||  | |||| |||||| ||||||||||||||| ||||||||| | ||| |||| ||||| ||||||| ||  |||||||||||||    
T  7083480 taaacgatattcattcactcaaattgatagagtacatcgatacaatataaattcaaattcgctaaaaataaaaaggatgaatctgtgaacaaactcacaa 7083579  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  7083580 catccatgttaata 7083593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 382
Target Start/End: Original strand, 7860878 - 7860971
Alignment:
Q  290 tcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatc 382  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||||| | | | ||||||||||  |||||| || ||| ||||||||||||||    
T  7860878 tcattctttcaaattgatagaatacatcgatacagtacaaattcaaattcgttaaaaacaaaaagaatgaatctgtaaataaactcacaacatc 7860971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 13966005 - 13965892
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| |  || |||||||||| ||||||| ||  ||||||||||||     
T  13966005 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattccctaaaaacaaaaaggatgaatctgttaacaaactcacag 13965906  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  13965905 catccatgttaata 13965892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 380
Target Start/End: Complemental strand, 27395278 - 27395177
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||| ||||||||||| || |||| |||||| | |||||||| |||||||||||||| | ||| |||||||||||| |||||||   |||||||||||||    
T  27395278 taaataatattcattcattcaaattgatagagttcatcgatataatacaaattcaaattcgctaaaaacaaaaatggtgaatatttgaacaaactcacaa 27395179  T
Q  379 ca 380  Q
    ||    
T  27395178 ca 27395177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 46268127 - 46268015
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttg-ctaaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| ||||||| |||||| |||||||||||||||||||| |||| | | | ||||||| || ||||||||||  |||||||||||||    
T  46268127 taaacgatatttattcatttaaattgatagagtacatcgatacaatacaaatacaaattcgtcaaaaacaacaaggatgaatatg-taacaaactcacaa 46268029  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  46268028 catccatgttaata 46268015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 32616526 - 32616622
Alignment:
Q  288 attcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||| || |||| |||||| |||||||||| |||||||||||||| | ||| |||||||||| ||||||||||  |||||||||  |||||||    
T  32616526 attcattcattcaaattgatagagtacatcgatataatacaaattcaaattcgctaaaaacaaaaaagatgaatatgtgaacaaactcttaacatcc 32616622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 286 - 392
Target Start/End: Complemental strand, 53648063 - 53647955
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaa-tacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||||| || |||| |||||| ||||||||||||| ||||||| |||| | ||| |||||||||| ||||||||||  |||||||||| |||||||    
T  53648063 atattcattcattcaaattgatagagtacatcgatacaattacaaatccaaattcgctaaaaacaaaaaggatgaatatgtgaacaaactcataacatcc 53647964  T
Q  384 gtattaata 392  Q
     | ||||||    
T  53647963 atgttaata 53647955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 280 - 382
Target Start/End: Complemental strand, 27091170 - 27091067
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||| |||| || |||| |||||| |||||||||||||||||||| ||||||   | |||||||||| ||| ||||||| |||||||| ||||    
T  27091170 taaacgatatttattcattcaaattgatagagtacatcgatacaatacaaatccaaagtcattaaaaacaaaaaggataaatatgcgaacaaacttacaa 27091071  T
Q  379 catc 382  Q
    ||||    
T  27091070 catc 27091067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 391
Target Start/End: Complemental strand, 28837511 - 28837405
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||| ||| ||  || ||||||||| |||||     
T  28837511 atattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggataaatttgtgaataaactcacatcatcca 28837412  T
Q  385 tattaat 391  Q
    |||||||    
T  28837411 tattaat 28837405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 393933 - 394046
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||| | |||||||||||||||||||| |||| | | | |||||||||| | ||||| ||  |||||||||||||    
T  393933 taaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgttaaaaacaaaaagggtgaatctgtgaacaaactcacaa 394032  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  394033 catccatgttaata 394046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 8517118 - 8517231
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||| |||||||||||||| |||| | ||| |||||||||| ||||||| ||  |||||||| ||||    
T  8517118 taaacgatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatttgtgaacaaactaacaa 8517217  T
Q  379 catccgtattaata 392  Q
     |||| | ||||||    
T  8517218 tatccatgttaata 8517231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 12716791 - 12716904
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||  || |||| |||| | ||||||||||||||||| ||||||||   || |||| || |||||||||| ||| || ||||||||||    
T  12716791 taaacgatattcatttattcaaattgataaattacatcgatacaatacatattcaaaggcactaaaaataagaatgatgaatctgcgaagaaactcacaa 12716890  T
Q  379 catccgtattaata 392  Q
    ||||| ||||||||    
T  12716891 catccatattaata 12716904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 7084404 - 7084289
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatac--aatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcac 376  Q
    ||||| |||||||||| || |||| |||||| |||||||||||  ||||||||| |||| | ||| |||||||||| ||||||| ||  |||||||||||    
T  7084404 taaacgatattcattcattcaaattgatagagtacatcgatacataatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcac 7084305  T
Q  377 aacatccgtattaata 392  Q
    | ||||| | ||||||    
T  7084304 atcatccatgttaata 7084289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 29266563 - 29266675
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatgatgaatatgcaaacaaactcacaac 379  Q
    ||||| |||||||||| || |||| |||||| ||||| ||||||||||||||||||| | |||| ||  |||| ||||||  ||  |||||||||||| |    
T  29266563 taaacgatattcattcattcaaattgatagagtacattgatacaatacaaattcaaattcgctagaaacaaaaggatgaaactgtgaacaaactcacagc 29266662  T
Q  380 atccgtattaata 392  Q
    |||| | ||||||    
T  29266663 atccatgttaata 29266675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 383
Target Start/End: Complemental strand, 39838056 - 39837952
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| | |||| || ||| |||||||| |||| |||| ||||||||| |||||| ||||||| ||  |||||||||||||    
T  39838056 taaacgatattcattcattcaaattgttagagtatatcaatacaatagaaatccaaatttgctaaaaacaaaaaggatgaatctgtgaacaaactcacaa 39837957  T
Q  379 catcc 383  Q
    |||||    
T  39837956 catcc 39837952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 395
Target Start/End: Complemental strand, 46829822 - 46829738
Alignment:
Q  312 tacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    |||||| ||||||| |||||||||| | ||||||| ||||||  |||||| |||||||||||||||||||| | | |||||||||    
T  46829822 tacatccatacaatgcaaattcaaaatcgctaaaaacaaaaagaatgaatctgcaaacaaactcacaacattcatgttaataaca 46829738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 24100589 - 24100514
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaat 360  Q
    |||||||||| || |||| |||||| |||||||||||||||||||| |||  | ||| ||||||||||||||||||    
T  24100589 atattcattcattcaaattgatagagtacatcgatacaatacaaatccaatttcgctaaaaacaaaaatgatgaat 24100514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 24611463 - 24611570
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| ||||| ||||||||||||||  ||| | ||| |||||||||| ||||||| ||  |||||||||||| |||||     
T  24611463 atattcattcattcaaattgatagagtacattgatacaatacaaatctaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcacagcatcca 24611562  T
Q  385 tattaata 392  Q
    | ||||||    
T  24611563 tgttaata 24611570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 26742137 - 26742244
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||| | | ||||||| |||||||||| |||| | |||| ||||||||||||||||| ||  |||||||||||| |||||     
T  26742137 atattcattcattcaaattgatatagtgcatcgatgcaatacaaatccaaattcgctataaacaaaaatgatgaatctgtgaacaaactcacatcatcca 26742236  T
Q  385 tattaata 392  Q
    | ||||||    
T  26742237 tgttaata 26742244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 286 - 392
Target Start/End: Original strand, 38943822 - 38943929
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccg 384  Q
    |||||||||| || |||| |||||| |||||||||||||||||||| ||||   ||| |||||||||| ||||||| ||  |||||||||| | |||||     
T  38943822 atattcattcattcaaattgatagagtacatcgatacaatacaaatccaaatccgctaaaaacaaaaaggatgaatctgtgaacaaactcatatcatcca 38943921  T
Q  385 tattaata 392  Q
    | ||||||    
T  38943922 tgttaata 38943929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 20399569 - 20399666
Alignment:
Q  288 attcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa--caaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||| || |||| |||||| ||||||||||||||||||||||||| | || ||||   ||||| |||||||  |  ||||||||||||||||||    
T  20399569 attcattcattcaaattgatagactacatcgatacaatacaaattcaaattcgccaaaagcaaaaaaggatgaatccgtgaacaaactcacaacatcc 20399666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 2945521 - 2945468
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaataacaa 396  Q
    |||||||||| ||||||||||| |||||||||||| ||||| | ||||||||||    
T  2945521 aaaacaaaaaggatgaatatgcgaacaaactcacagcatccatgttaataacaa 2945468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 22621841 - 22621764
Alignment:
Q  317 cgatacaatacaaattcaaagttgctaaa-acaaaaa-tgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    ||||||| |||||||||||| | |||||| ||||||| |||||||||||| |||| || |||||||||| ||||||||    
T  22621841 cgatacagtacaaattcaaactcgctaaagacaaaaaatgatgaatatgcgaacatacccacaacatccatattaata 22621764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 383
Target Start/End: Complemental strand, 25658623 - 25658525
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    |||||||||||||||| || |||| || | ||||||| ||||||||||||||||      ||| ||||||||||| |||||| ||  |||||||||||||    
T  25658623 taaacaatattcattcattcaaattgacaaaatacattgatacaatacaaattc------gctaaaaacaaaaataatgaatttgtgaacaaactcacaa 25658530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 30202500 - 30202387
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgcta-aaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| ||||||||||  | |||| |||||| |||||| |||||||||||||  ||| | |||| ||||||||| ||||||  ||  |||||||||||||    
T  30202500 taaacgatattcattcaatcaaattgatagagtacatctatacaatacaaatctaaattcgctagaaacaaaaaggatgaaactgtgaacaaactcacaa 30202401  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  30202400 catccatgttaata 30202387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 333
Target Start/End: Complemental strand, 5388953 - 5388901
Alignment:
Q  281 aaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattc 333  Q
    |||||| |||||||| ||||||| |||||| ||||||| ||||||||||||||    
T  5388953 aaacaacattcattcatttaaattgatagagtacatcgctacaatacaaattc 5388901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 29576841 - 29576892
Alignment:
Q  333 caaagttgctaa-aacaaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||| ||||||| |||||||||||||||| | ||||||||||||||||||||    
T  29576841 caaatttgctaataacaaaaatgatgaatctacaaacaaactcacaacatcc 29576892  T

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Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 46775589 - 46775628
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatc 382  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  46775589 aaaacaaaaaggctgaatatgcaaacaaactcacaacatc 46775628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 383
Target Start/End: Original strand, 11209978 - 11210076
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||||||||| || |||| |||||| |||||| ||||||| ||||| |||| |  |||||| || ||| ||||||| ||  ||||||||||||||||||    
T  11209978 atattcattcattcaaattgatagagtacatcaatacaatgcaaatccaaattcactaaaaacataaaggatgaatctgtgaacaaactcacaacatcc 11210076  T

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Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 322 - 395
Target Start/End: Original strand, 40198253 - 40198327
Alignment:
Q  322 caatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    ||||||||||||||||| | ||||| |||||||||||| | | | |||||||||||||||| | | |||||||||    
T  40198253 caatacaaattcaaagtcgttaaaaacaaaaatgatgagtctacgaacaaactcacaacattcctgttaataaca 40198327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 381
Target Start/End: Original strand, 4518606 - 4518683
Alignment:
Q  305 gatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacat 381  Q
    |||| |||||||||||| ||| |||||||||| | ||| |||| ||| |||||| || ||| ||||||||||||||||    
T  4518606 gataaaatacatcgataaaatgcaaattcaaattcgctaaaaagaaatatgatgtatctgcgaacaaactcacaacat 4518683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 658
Target Start/End: Original strand, 7083926 - 7083959
Alignment:
Q  625 ttttggatcaaaattgaccctaaatcatccatct 658  Q
    ||||||||||||||||||||||||| ||||||||    
T  7083926 ttttggatcaaaattgaccctaaattatccatct 7083959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 392
Target Start/End: Complemental strand, 15182900 - 15182808
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaaaaatg-atgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||| |||||| |||||| ||| |||| || |||||||| |||||||  |||||| |||||| ||| |||||||||||||||||  ||||||||    
T  15182900 aaattgatagagtacatcaatataatataa-ttcaaagtcgctaaaaataaaatggatgaatctgcgaacaaactcacaacatctatattaata 15182808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 22121894 - 22121837
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaag 337  Q
    ||||| ||||||| || ||||| | |||||| |||||| |||||||||||||||||||    
T  22121894 taaacgatattcaatcatttaatttgatagagtacatcaatacaatacaaattcaaag 22121837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 392
Target Start/End: Complemental strand, 26674805 - 26674712
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaata 392  Q
    |||| |||||| || |||||||||||||||||   || | ||| |||| ||||||||||||| ||  |||||||||||||||||| | ||||||    
T  26674805 aaattgatagagtatatcgatacaatacaaatctcaattcgctaaaaataaaaatgatgaatctgtgaacaaactcacaacatccatgttaata 26674712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 657
Target Start/End: Complemental strand, 52465508 - 52465475
Alignment:
Q  624 attttggatcaaaattgaccctaaatcatccatc 657  Q
    ||||||| ||||||||||||||||||||||||||    
T  52465508 attttgggtcaaaattgaccctaaatcatccatc 52465475  T

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Target: scaffold0321 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 6788 - 6902
Alignment:
Q  280 taaacaatattcattctttt-aaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcaca 377  Q
    ||||| |||||||||| ||| |||| |||||| ||||||||||||||||||||||||| | ||| |||||||||| ||||||| ||  ||||||||||||    
T  6788 taaacgatattcattcatttcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaaggatgaatctgtgaacaaactcaca 6887  T
Q  378 acatccgtattaata 392  Q
    |||||| | ||||||    
T  6888 acatccatgttaata 6902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 35537 - 35424
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| ||||| |||||||||| ||| ||| ||  |||||||||||||    
T  35537 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaatttgctaaaaacaaaaaggataaatttgtgaacaaactcacaa 35438  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  35437 catccatgttaata 35424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 280 - 393
Target Start/End: Original strand, 403907 - 404021
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || ||||  ||||| ||||||||||||||||||||||||| | ||| |||||||||| ||||||| ||  ||||||||||||     
T  403907 taaacgatattcattcattcaaattaatagagtacatcgatacaatacaaattcaaattcgctgaaaacaaaaaggatgaatctgtgaacaaactcacag 404006  T
Q  379 catccgtattaataa 393  Q
    ||||| | |||||||    
T  404007 catccatgttaataa 404021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 46; Significance: 9e-17; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 3726 - 3839
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| |||||||||||||||||||| |||| | | | |||||||||| ||||||| ||  |||||||||||||    
T  3726 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcggtaaaaacaaaaaggatgaatctgtgaacaaactcacaa 3825  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  3826 catccatgttaata 3839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 298 - 382
Target Start/End: Original strand, 5875 - 5960
Alignment:
Q  298 ttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacatc 382  Q
    |||||| |||||||||||||||||||||| ||||||||| | ||| |||||||||  ||||||| ||  |||||||||||||||||    
T  5875 ttaaattgatagaatacatcgatacaatataaattcaaattcgctaaaaacaaaatggatgaatctgtgaacaaactcacaacatc 5960  T

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Target: scaffold0056 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 74626 - 74513
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||  ||||||| |||||| |||||||||||||||||||| |||| | ||| |||||||||| ||||||| ||  |||||| ||||||    
T  74626 taaacgatattcatttatttaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggatgaatctgtgaacaaagtcacaa 74527  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  74526 catccatgttaata 74513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 3357 - 3244
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| |||||||||| || |||| |||||| ||||||||||||||| ||||| ||| | ||| |||||||||| ||||||| |   ||||||||||||     
T  3357 taaacgatattcattcattcaaattgatagagtacatcgatacaatataaatttaaattcgctaaaaacaaaaaggatgaatctatgaacaaactcacat 3258  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  3257 catccatgttaata 3244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 436
Target Start/End: Original strand, 404455 - 404578
Alignment:
Q  321 acaatacaaattcaaagttgctaaa-acaaaaatgatgaatatgcaaacaaactcacaacatccgtattaataac----aatc---gagtatatatgctt 412  Q
    |||||| ||||||||| |||||| | ||||||||||||||||||  |||||||| ||||||||| | ||||||||    ||||   ||||| ||||||||    
T  404455 acaataaaaattcaaaattgctatatacaaaaatgatgaatatgtgaacaaactgacaacatccatgttaataacataaaatcgtagagtacatatgctt 404554  T
Q  413 acaaatatgactatacacaagtct 436  Q
    |||||||||| ||||  |||||||    
T  404555 acaaatatgattatattcaagtct 404578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 381
Target Start/End: Original strand, 756 - 838
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgct-aaaacaaaaatgatgaatatgcaaacaaactcacaacat 381  Q
    |||| ||||||| ||||||||| |||||||||||||| | ||| ||||||| |||||||||  ||  ||||||||||||||||    
T  756 aaattgatagaacacatcgatataatacaaattcaaattcgctaaaaacaagaatgatgaaactgtgaacaaactcacaacat 838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 383
Target Start/End: Original strand, 41361 - 41445
Alignment:
Q  300 aaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaacaa-aaatgatgaatatgcaaacaaactcacaacatcc 383  Q
    |||| |||||| |||||| ||| |||||| ||||||||||| ||||| || ||| ||||||||| |||||||||||  |||||||    
T  41361 aaattgatagagtacatcaataaaatacacattcaaagttgttaaaaaaagaaaggatgaatatacaaacaaactcggaacatcc 41445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 36054 - 36002
Alignment:
Q  343 aaaacaaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    ||||||||||  ||||||||||||||||| ||||||||||| | |||||||||    
T  36054 aaaacaaaaagaatgaatatgcaaacaaattcacaacatccatgttaataaca 36002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 395
Target Start/End: Complemental strand, 4186 - 4139
Alignment:
Q  348 aaaaatgatgaatatgcaaacaaactcacaacatccgtattaataaca 395  Q
    ||||||||||||| ||| || ||||||||||||||| |||||||||||    
T  4186 aaaaatgatgaatctgcgaataaactcacaacatccatattaataaca 4139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 467 - 540
Target Start/End: Complemental strand, 4034 - 3961
Alignment:
Q  467 gttgatgacaccaaagttattgattaaatttacacttgattaaagtttaacttttaatctgaatcaaataaaca 540  Q
    ||||| ||| |||||||||||||||  || | |||||||| |||| | | |||||||| |||||||||||||||    
T  4034 gttgacgacgccaaagttattgattggatctgcacttgatcaaagataatcttttaatttgaatcaaataaaca 3961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 201742 - 201828
Alignment:
Q  286 atattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttg-ctaaaacaaaaatgatgaatatgcaaacaaa 371  Q
    |||| ||||| ||||||| |||||| || ||| |||||||||||||||||||| |  ||||  ||||| ||||||| ||||||||||    
T  201742 atatacattcatttaaattgatagagtaaatcaatacaatacaaattcaaagtcgtttaaagtaaaaaggatgaatttgcaaacaaa 201828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 2107 - 2160
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattc 333  Q
    ||||| |||||||||| || |||| |||| | ||||||||||||||||||||||    
T  2107 taaacgatattcattcattcaaattgataaagtacatcgatacaatacaaattc 2160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 21055 - 20942
Alignment:
Q  280 taaacaatattcattcttttaaatcgatagaatacatcgatacaatacaaattcaaagttgctaaaa-caaaaatgatgaatatgcaaacaaactcacaa 378  Q
    ||||| || ||||||| || |||| |||||| ||||||||| |||||||| | |||| |  |||||| |||||| ||||||| |  |||||||||||||     
T  21055 taaacgattttcattcattcaaattgatagagtacatcgatccaatacaattccaaattcactaaaaacaaaaaggatgaatctttaaacaaactcacat 20956  T
Q  379 catccgtattaata 392  Q
    ||||| | ||||||    
T  20955 catccatgttaata 20942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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