View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12841_low_33 (Length: 349)
Name: NF12841_low_33
Description: NF12841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12841_low_33 |
 | |
|
| [»] scaffold0113 (1 HSPs) |
| | |
|
| [»] scaffold0018 (1 HSPs) |
| | |
|
| [»] scaffold0045 (1 HSPs) |
| | |
|
| [»] scaffold0171 (1 HSPs) |
| | |
|
| [»] scaffold0220 (1 HSPs) |
| | |
|
| [»] scaffold0140 (1 HSPs) |
| | |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-109; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 14 - 274
Target Start/End: Complemental strand, 27451455 - 27451195
Alignment:
| Q |
14 |
acatcattgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgtt |
113 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
27451455 |
acataattgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaagagactcatgtt |
27451356 |
T |
|
| Q |
114 |
aaagataacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagact |
213 |
Q |
| |
|
| |||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||| ||||| ||| |||||||||||| || ||||||||||||| |
|
|
| T |
27451355 |
acggataacttatttggttttattcctcggaggtcgactatggaagcgaactacttactttgacgcatgatggagcgatatcggacggataaaaaagact |
27451256 |
T |
|
| Q |
214 |
tgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
27451255 |
tgcaattagttttcacttatttggagaaggcgtaggatagagtacttagagagattttgtg |
27451195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 23 - 274
Target Start/End: Complemental strand, 23907575 - 23907324
Alignment:
| Q |
23 |
cgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||| |||||| |||| ||||| |
|
|
| T |
23907575 |
cgcgaattataggggaattaagctaatgagtcataccataaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataat |
23907476 |
T |
|
| Q |
123 |
ttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattag |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
23907475 |
caatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgatggagcgatatcgaacggataaaaaagacttgcacttag |
23907376 |
T |
|
| Q |
223 |
ttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||| | |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
23907375 |
ttttcattgatttggaaaaggcgtatgatagagtaccaagagagattttgtg |
23907324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 19 - 274
Target Start/End: Complemental strand, 48623804 - 48623549
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| ||| |
|
|
| T |
48623804 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaagaagactcgagttacaga |
48623705 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| |||||||||| | || ||||||||||||||||| |
|
|
| T |
48623704 |
taaccaatttggttttatgcctgggaggtcgactatggaagcaatctacttagttcgacgcgtgatggagcgatataggacggataaaaaagacttgcac |
48623605 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||| | |||||| |||| ||||||||||||||| |||||||||||||| |
|
|
| T |
48623604 |
ttagttttcattgatttggaaaaggtgtatgatagagtaccgagagagattttgtg |
48623549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 20 - 274
Target Start/End: Complemental strand, 1778293 - 1778038
Alignment:
| Q |
20 |
ttgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagat |
119 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||| || || ||||||||||||| |||||| |||| ||| |
|
|
| T |
1778293 |
ttgcgcgaattataggagaattaagctaatgagtcataccatggaattatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggat |
1778194 |
T |
|
| Q |
120 |
aacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaat |
219 |
Q |
| |
|
||| ||||| ||||||||||||||||| ||||||||||| | ||||||||||||||| |||| |||||||||||| || ||||||||| ||||||| | |
|
|
| T |
1778193 |
aaccaatttgattttatgcctgggaggttgactatggaagcaatctacttacttcgacgtgtgatggagcgatatcggacggataaaaaaaacttgcact |
1778094 |
T |
|
| Q |
220 |
tagttttcacttatttgg-ggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
||||||||| | |||||| |||| ||||||||||||| | |||||||||||||| |
|
|
| T |
1778093 |
tagttttcattgatttggaaaaaggtgtatgatagagtatcaagagagattttgtg |
1778038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 49 - 274
Target Start/End: Original strand, 435267 - 435492
Alignment:
| Q |
49 |
tgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtc |
148 |
Q |
| |
|
||||||||||||||||||||||||||||||| || || ||||||||||||| || ||| |||| |||||| ||||||||||||||||||||||| |
|
|
| T |
435267 |
tgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggaggctcgagttacggataaccaatttggttttatgcctgggaggtt |
435366 |
T |
|
| Q |
149 |
gactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtat |
248 |
Q |
| |
|
||||||||||| | |||||||||||||||||||| ||||||||||| || ||||||||||||||||| |||||||||| | |||||| ||| ||||| |
|
|
| T |
435367 |
gactatggaagcaatctacttacttcgacgcgtgatagagcgatatcggacggataaaaaagacttgcacttagttttcattgatttggaaaagacgtat |
435466 |
T |
|
| Q |
249 |
gatagagtacctagagagattttgtg |
274 |
Q |
| |
|
||||||||||| |||||||||||||| |
|
|
| T |
435467 |
gatagagtaccgagagagattttgtg |
435492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 60 - 274
Target Start/End: Original strand, 53703655 - 53703870
Alignment:
| Q |
60 |
atgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaag |
159 |
Q |
| |
|
|||||||||||||||||||| || || ||||||||||||| |||||| |||| ||||||| | ||| ||||||| ||| ||||||||||||||||| |
|
|
| T |
53703655 |
atgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgggttacagataaccaaattgattttatgtctgagaggtcgactatggaag |
53703754 |
T |
|
| Q |
160 |
tgaactacttacttcgacgcgtgagggagcgatatcgaacagat-aaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtac |
258 |
Q |
| |
|
| |||||||||||||||||||| |||||||||||| || ||| ||||| |||||||| |||||||||||| |||||| |||||||||||| |||||| |
|
|
| T |
53703755 |
caatctacttacttcgacgcgtgacggagcgatatcggacggatgaaaaaggacttgcacttagttttcactgatttggaaaaggcgtatgattgagtac |
53703854 |
T |
|
| Q |
259 |
ctagagagattttgtg |
274 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
53703855 |
cgagagagattttgtg |
53703870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 275
Target Start/End: Original strand, 39707472 - 39707725
Alignment:
| Q |
22 |
gcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaag-ggtaattgagcgaagactaagaaaatagactcatgttaaagata |
120 |
Q |
| |
|
|||| |||||||| |||||||| ||||||||||||||||||||||||| ||||| ||| ||||| ||||||||||||||| | | || ||| ||| |
|
|
| T |
39707472 |
gcgccaattatagaggaattaaactaatgagtcataccatgaagttataggaaaaaggtgattgaacgaagactaagaaaagaaagtcgatttacgaata |
39707571 |
T |
|
| Q |
121 |
acttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaatt |
220 |
Q |
| |
|
|| |||| ||||||||||||| || | ||||| | ||| || |||||||||||||| |||| ||||||||| | || ||||||||||||||||| || |
|
|
| T |
39707572 |
accaattttgttttatgcctgg-agattgactacgaaagcgatttacttacttcgacgtgtgatggagcgataacagacggataaaaaagacttgcactt |
39707670 |
T |
|
| Q |
221 |
agttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtga |
275 |
Q |
| |
|
|||||||| | |||||| |||| ||||||||||||| ||||||||| |||||||| |
|
|
| T |
39707671 |
agttttcattgatttggagaagacgtatgatagagtgcctagagaggttttgtga |
39707725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 27446818 - 27446759
Alignment:
| Q |
275 |
acaaatctctttcatttctccaagtcagtcatctactctaaaaccttgtgattcttgatg |
334 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27446818 |
acaaatctctttcatttctccaagtcagtcatctactctaaaaccttgtgattcttgatg |
27446759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 16001225 - 16001137
Alignment:
| Q |
14 |
acatcattgcgcgaattataggggaattaagct-aatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaa |
101 |
Q |
| |
|
|||| |||||| |||||||||| ||||||| | |||||||||||| |||||||||||||||||||| ||| | ||||||||||||||| |
|
|
| T |
16001225 |
acataattgcgtgaattataggagaattaaaattaatgagtcatactatgaagttatgggaaagggtgatttaacgaagactaagaaaa |
16001137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 56224776 - 56224835
Alignment:
| Q |
27 |
aattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgag |
86 |
Q |
| |
|
|||||||| |||||||| |||||||||||| ||||||||| ||||||| |||||||||| |
|
|
| T |
56224776 |
aattatagaggaattaaactaatgagtcatgtcatgaagttgtgggaaatggtaattgag |
56224835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 2296364 - 2296429
Alignment:
| Q |
204 |
aaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagatt |
269 |
Q |
| |
|
|||||||||||||| |||||||||| | |||||| ||||| ||| ||||||| |||| ||||||| |
|
|
| T |
2296364 |
aaaaaagacttgcacttagttttcattgatttggagaaggtgtacaatagagttcctaaagagatt |
2296429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 159; Significance: 1e-84; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 21 - 271
Target Start/End: Complemental strand, 45368901 - 45368651
Alignment:
| Q |
21 |
tgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagata |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |||| |
|
|
| T |
45368901 |
tgcgcgaattataggggaattaagctaatgagtcataccatgaaattatgggaaagggtaattgaacgaagactaagaaaagagactcatgttacggata |
45368802 |
T |
|
| Q |
121 |
acttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaatt |
220 |
Q |
| |
|
|| |||||| |||||||||||||||| ||||||||||| || ||||||||||||||||||| |||||||||||| || |||||||| |||| || || |
|
|
| T |
45368801 |
accaatttggctttatgcctgggaggttgactatggaagcgatatacttacttcgacgcgtgatggagcgatatcggacggataaaaagaacttacactt |
45368702 |
T |
|
| Q |
221 |
agttttcacttatttggggaaggcgtatgatagagtacctagagagatttt |
271 |
Q |
| |
|
|||||||| | |||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
45368701 |
agttttcattgattttgagaaggcgtatgatagagtacctagagagatttt |
45368651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 27 - 274
Target Start/End: Complemental strand, 452885 - 452638
Alignment:
| Q |
27 |
aattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttat |
126 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | |||||||| || || ||||||||||||| |||||| |||| |||||| || |
|
|
| T |
452885 |
aattataggggaattaagctaatgagtcataccatgaagttacgagaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataaccaat |
452786 |
T |
|
| Q |
127 |
ttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagtttt |
226 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| || ||||||||||||||||| |||||||| |
|
|
| T |
452785 |
ttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttgcacttagtttt |
452686 |
T |
|
| Q |
227 |
cacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|| | |||||| |||||||| ||||||||||| |||||||||||||| |
|
|
| T |
452685 |
cattgatttggaaaaggcgtacgatagagtaccgagagagattttgtg |
452638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 19 - 274
Target Start/End: Complemental strand, 24584886 - 24584628
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaatt---gagcgaagactaagaaaatagactcatgttaa |
115 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || | |||||||||||| |||||| |||| |
|
|
| T |
24584886 |
attgcacgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgattattgaacaaagactaagaaaggagactcgagttat |
24584787 |
T |
|
| Q |
116 |
agataacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttg |
215 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||| |||||||| || |||||||||||||||||||| |||||||||||| || |||||||||||||| |
|
|
| T |
24584786 |
agataactgatttggttttatgtctgggaggtcgagtatggaagcgatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagactta |
24584687 |
T |
|
| Q |
216 |
caattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|| || |||||| | |||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
24584686 |
cacctaattttcattgatttggagaaggcgtatgatagagtttccagagagattttgtg |
24584628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 8179798 - 8180046
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| || |
|
|
| T |
8179798 |
attgcgcgaattataggggaattaagctaataagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacgga |
8179897 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| ||| | |||||||||| ||||||||| |||||||||||| || ||||||||||||||||| |
|
|
| T |
8179898 |
taaccaatttggttttatgcctgggaggtcgactatgaaagcaatctacttactttgacgcgtgatggagcgatatcggacggataaaaaagacttgcac |
8179997 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagaga |
267 |
Q |
| |
|
|| ||||||| | |||||| ||| |||||||||||||||| ||||||| |
|
|
| T |
8179998 |
ttggttttcattgatttggaaaagacgtatgatagagtaccgagagaga |
8180046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 37281111 - 37281316
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||| |||||||||||||||||| ||| || ||||| ||||||||||| ||| | ||| | |||| || |
|
|
| T |
37281111 |
attgcgcgaattataggagaattaaactaatgaatcataccatgaagttatgataaaaagtgattgaacgaagactaagtaaacaaacttaagttactga |
37281210 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| |||||||||||| |||| || ||||||||| ||||||| |||||||||| |||| |||| | |||||| || | |||||||||| |||||| |
|
|
| T |
37281211 |
taaccaatttggttttatacctgagaagtcgactatagaagtgatctacttactttgacgtgtgatgaagcgatgtcatgcgaataaaaaagatttgcaa |
37281310 |
T |
|
| Q |
219 |
ttagtt |
224 |
Q |
| |
|
|||||| |
|
|
| T |
37281311 |
ttagtt |
37281316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 175
Target Start/End: Original strand, 13148336 - 13148482
Alignment:
| Q |
28 |
attataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatt |
127 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| |||||||||||||| |||||| |||| |||||| ||| |
|
|
| T |
13148336 |
attataggggaattaaactaatgagtcttaccatgaagttatgggaaagggtgattgaatgaagactaagaaaagagactcgagttatcgataaccaatt |
13148435 |
T |
|
| Q |
128 |
tggttttatgcctgggaggtcgactatggaagtgaactacttacttcg |
175 |
Q |
| |
|
|| |||||||||| || ||| |||||||||| || |||||||||||| |
|
|
| T |
13148436 |
tgattttatgcctagg-tgtcaactatggaagcgatctacttacttcg |
13148482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 2609703 - 2609788
Alignment:
| Q |
189 |
cgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||| || ||||||||||||||||| |||||||||| | |||||| ||||||||||||||||| | |||||||||||||| |
|
|
| T |
2609703 |
cgatatcggacggataaaaaagacttgcacttagttttcattgatttggaaaaggcgtatgatagagtgctgagagagattttgtg |
2609788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 274
Target Start/End: Original strand, 14769487 - 14769560
Alignment:
| Q |
201 |
gataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
||||||||||||||||| || ||||||| | |||||| |||| ||||||||| |||| |||||||||||||||| |
|
|
| T |
14769487 |
gataaaaaagacttgcacttggttttcattgatttggagaagacgtatgataaagtagctagagagattttgtg |
14769560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 196
Target Start/End: Original strand, 33251337 - 33251497
Alignment:
| Q |
36 |
ggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggtttta |
135 |
Q |
| |
|
|||||||| || ||||||||| |||||||| ||||| ||| ||| ||||| |||||||||| |||| || || |||| ||||| || |||||||| |
|
|
| T |
33251337 |
ggaattaaacttatgagtcatcccatgaagctatggaaaatggtgattgaacgaagactaaaaaaagtgattcgagttacttataaccaatctggtttta |
33251436 |
T |
|
| Q |
136 |
tgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcg |
196 |
Q |
| |
|
|||| | ||||| |||||||||| | ||| ||||||||||| |||| |||||||||||| |
|
|
| T |
33251437 |
tgcccgaaaggtcttctatggaagttatctaattacttcgacgtgtgatggagcgatatcg |
33251497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 13148540 - 13148583
Alignment:
| Q |
232 |
atttggggaaggcgtatgatagagtacctagagagattttgtga |
275 |
Q |
| |
|
|||||||||||| || ||||||||| |||||||||||||||||| |
|
|
| T |
13148540 |
atttggggaaggtgtgtgatagagtgcctagagagattttgtga |
13148583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 156; Significance: 8e-83; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 18 - 274
Target Start/End: Original strand, 32629616 - 32629868
Alignment:
| Q |
18 |
cattgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaag |
117 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||| | |
|
|
| T |
32629616 |
cattgcgcgaattacaggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgaacgaagactaagaaaagagactcacgttacgg |
32629715 |
T |
|
| Q |
118 |
ataacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgca |
217 |
Q |
| |
|
||||| |||||| ||||||||||| |||||||||||||||| || | ||||||||||||||| |||| ||||||| || |||||||||||||| || |
|
|
| T |
32629716 |
ataaccaatttggctttatgcctggaaggtcgactatggaagcgatc----tacttcgacgcgtgatggagagatatcggacggataaaaaagacttaca |
32629811 |
T |
|
| Q |
218 |
attagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
32629812 |
cttagttttcattgatttggagaaggcgtatgatagagtacctagagagattttgtg |
32629868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 19 - 270
Target Start/End: Original strand, 36650999 - 36651250
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| |||| || |
|
|
| T |
36650999 |
attgcgtgaattataggagaattaagctaatgagtcataccatgaagttatgggaaagggtgattgaaagaagactaagaaaggagactcgagttacgga |
36651098 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| ||||||||||||| |||||||||||| |||||||| | |||||||||||||||||||| |||||||||||| || ||||||||||||||||| |
|
|
| T |
36651099 |
taaccaatttggttttatgtctgggaggtcgattatggaagcaatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttgcac |
36651198 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattt |
270 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
36651199 |
ttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattt |
36651250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 29 - 274
Target Start/End: Complemental strand, 39907646 - 39907401
Alignment:
| Q |
29 |
ttataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttattt |
128 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||| | |||| |||||| |||| |
|
|
| T |
39907646 |
ttattggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagacccgagttacggataaccaattt |
39907547 |
T |
|
| Q |
129 |
ggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttca |
228 |
Q |
| |
|
|||||||||||||||||||||||| |||||| | |||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
39907546 |
ggttttatgcctgggaggtcgactgtggaagcaatctacttacttcgacgcgtgatggagcgatatcggacagataaaaaagacttgcacttagttttca |
39907447 |
T |
|
| Q |
229 |
cttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
| |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
39907446 |
ttgatttggaaaaggcgtatgatagagtaccgagagagattttgtg |
39907401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 19 - 274
Target Start/End: Complemental strand, 33351083 - 33350828
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || | ||||||||||||| |||||| |||| || |
|
|
| T |
33351083 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttgtgggaaagggtgatcaaaagaagactaagaaaggagactctagttacgga |
33350984 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||| | ||||||||||| |||||||| |||||||||||| || ||||||||||||||||| |
|
|
| T |
33350983 |
taaccaatttggttttatgcttgggaggtcgactatggaagcaatctacttacttcaacgcgtgatggagcgatatcggacggataaaaaagacttgcac |
33350884 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
||||||||| | |||||| |||| ||||||||||||||| |||||||||||||| |
|
|
| T |
33350883 |
ttagttttctttgatttggaaaaggggtatgatagagtaccgagagagattttgtg |
33350828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 19 - 274
Target Start/End: Original strand, 38896622 - 38896877
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||||||||||| |||||| |||| || |
|
|
| T |
38896622 |
attgcgcaaattataggggaattaagctaatgagtcataccatgaagttatggaaaagggtgatcgaaagaagactaagaaaggagactcgagttacgga |
38896721 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| ||| |||||||||||||||||||| |||||||||| | |||||||||||||||| | |||||||||||| || ||||||||||||||||| |
|
|
| T |
38896722 |
taaccaattcggttttatgcctgggaggtcaactatggaagcaatctacttacttcgacgcacaatggagcgatatcggacggataaaaaagacttgcac |
38896821 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||| | |||||| |||| ||||||||||||||| |||||||||||||| |
|
|
| T |
38896822 |
ttagttttcattaatttggaaaaggtgtatgatagagtaccgagagagattttgtg |
38896877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 19 - 274
Target Start/End: Complemental strand, 24178472 - 24178217
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| ||||||| |||| || |
|
|
| T |
24178472 |
attgcgtgaattataggggaatttagctaatgagtcataccatgaagttatgggaaagggtgattcaacgaagactaagaaaagagactcaagttacgga |
24178373 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| ||||||||||| ||| |||||||||||||||||| || |||||| || ||| |||||| ||||||||| || || |||| ||||| || ||| |
|
|
| T |
24178372 |
taacaaatttggttttacgccctggaggtcgactatggaagcgatctacttgctgcgatgcgtgatggagcgataccggacggatacaaaagggttacaa |
24178273 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||| | |||||| || || |||||| ||||||||||||||||||||||| |
|
|
| T |
24178272 |
ttagttttcattgatttggagacggtgtatgacagagtacctagagagattttgtg |
24178217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 11592694 - 11592890
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| || |
|
|
| T |
11592694 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacgga |
11592793 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttg |
215 |
Q |
| |
|
|||| ||||||||||||| || |||||||||||||||||| | || ||||||||||||||||| |||||||||||| || |||||||||||||| |
|
|
| T |
11592794 |
taaccaatttggttttatggcttggaggtcgactatggaagcaatctgcttacttcgacgcgtgatggagcgatatcggacgaataaaaaagacttg |
11592890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 88 - 274
Target Start/End: Original strand, 22346586 - 22346772
Alignment:
| Q |
88 |
gaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgaggga |
187 |
Q |
| |
|
||||||||||||| |||||| ||| |||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||| |
|
|
| T |
22346586 |
gaagactaagaaaggagactcgagtttcggataaccaatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacacgtgatgga |
22346685 |
T |
|
| Q |
188 |
gcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||| | |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
22346686 |
gcgatatcgaacggataaaaaagacttgcacttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtg |
22346772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 131 - 274
Target Start/End: Original strand, 38606156 - 38606298
Alignment:
| Q |
131 |
ttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcact |
230 |
Q |
| |
|
||||||| ||||||||||||||||| ||| || |||||||||||||||||||| |||||||||||| || |||||||||||||| || |||||||||| | |
|
|
| T |
38606156 |
ttttatgtctgggaggtcgactatgaaagcgatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttacacttagttttcatt |
38606255 |
T |
|
| Q |
231 |
tatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||| | ||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
38606256 |
gattttgagaaggcgtatgat-gagtacctggagagattttgtg |
38606298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 164 - 274
Target Start/End: Complemental strand, 46356983 - 46356873
Alignment:
| Q |
164 |
ctacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctaga |
263 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| || |||||||||||||||| |||||||||| | |||||| |||||||||||||||||||| ||| |
|
|
| T |
46356983 |
ctacttacttcgacgcgtgatggagcgatatcggacgaataaaaaagacttgcacttagttttcattgatttggaaaaggcgtatgatagagtaccgaga |
46356884 |
T |
|
| Q |
264 |
gagattttgtg |
274 |
Q |
| |
|
||||||||||| |
|
|
| T |
46356883 |
gagattttgtg |
46356873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 36870419 - 36870346
Alignment:
| Q |
201 |
gataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
||||||||| ||||||| ||| |||||| | |||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36870419 |
gataaaaaatacttgcacttaattttcattgatttggagaaggcgtatgatagagtgcctagagagattttgtg |
36870346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 11593158 - 11593217
Alignment:
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtgacaa |
278 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11593158 |
ttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtgacaa |
11593217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 153; Significance: 5e-81; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 20428915 - 20428659
Alignment:
| Q |
18 |
cattgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaag |
117 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||| |||| | |
|
|
| T |
20428915 |
cattgcgcgaattataagggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgaacgaagactaagaacagagactcacgttacaa |
20428816 |
T |
|
| Q |
118 |
ataacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgca |
217 |
Q |
| |
|
||||| || ||||||||||| |||||||| ||||||||||| || |||||||||| |||| |||| |||||||||||| || |||||||||||||| || |
|
|
| T |
20428815 |
ataaccaatatggttttatgcttgggaggttgactatggaagcgatctacttactttgacgtgtgatggagcgatatcggacggataaaaaagacttaca |
20428716 |
T |
|
| Q |
218 |
attagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20428715 |
cctagttttcattgatttgtagaaggcgtatgatagagtacctagagagattttgtg |
20428659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 21 - 270
Target Start/End: Complemental strand, 5260523 - 5260274
Alignment:
| Q |
21 |
tgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagata |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||| |||| |
|
|
| T |
5260523 |
tgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagacttagaaaagagactcacgttacggata |
5260424 |
T |
|
| Q |
121 |
acttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaatt |
220 |
Q |
| |
|
|| ||||||||||||| ||||||||||| |||||||| || || ||| |||||||| ||| |||||||||||| || |||||||||||||| || || |
|
|
| T |
5260423 |
accaatttggttttatgtatgggaggtcgattatggaagcgatctctttatttcgacgcctgatggagcgatatcggacggataaaaaagacttacactt |
5260324 |
T |
|
| Q |
221 |
agttttcacttatttggggaaggcgtatgatagagtacctagagagattt |
270 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5260323 |
agttttcatcgatttggagaaggcgtatgatagagtacctagagagattt |
5260274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 252
Target Start/End: Original strand, 30669902 - 30670132
Alignment:
| Q |
21 |
tgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagata |
120 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||||||||| ||||||| |||| |||| |
|
|
| T |
30669902 |
tgcgcaaattataggggaattaagctaatgagtcataccatgaagttatggcaaaggatgattgaacgaagactaagaaatgagactcaagttacggata |
30670001 |
T |
|
| Q |
121 |
acttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaatt |
220 |
Q |
| |
|
|| ||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||| |||||||||||| ||||| ||||||||||| || || |
|
|
| T |
30670002 |
accaatttggttttatgcc-aggaggtcgactatggaagcaatctacttacttcgacgtgtgatggagcgatatcggacagagaaaaaagacttacactt |
30670100 |
T |
|
| Q |
221 |
agttttcacttatttggggaaggcgtatgata |
252 |
Q |
| |
|
|||||||| | |||||| |||||||| ||||| |
|
|
| T |
30670101 |
agttttcattgatttggagaaggcgtttgata |
30670132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 274
Target Start/End: Original strand, 6082394 - 6082660
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| || |
|
|
| T |
6082394 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacgga |
6082493 |
T |
|
| Q |
119 |
taac-----------ttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaa |
207 |
Q |
| |
|
|||| || ||| ||||||||||||||||||||||||||||| | |||||||||||||| |||| | |||||||||| || ||||||| |
|
|
| T |
6082494 |
taaccaattttttttttttttttttttatgcctgggaggtcgactatggaagcaatctacttacttcgacatgtgatgcagcgatatcggacggataaaa |
6082593 |
T |
|
| Q |
208 |
aagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
| |||||||| |||||||||| | |||||| |||| ||||||||||||||| |||||||||||||| |
|
|
| T |
6082594 |
aggacttgcacttagttttcattgatttggaaaaggtgtatgatagagtaccgagagagattttgtg |
6082660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 89 - 274
Target Start/End: Original strand, 9705850 - 9706035
Alignment:
| Q |
89 |
aagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggag |
188 |
Q |
| |
|
||||||||||||| ||||||| |||| |||||| | ||| ||||||||||||| ||||||||||||| || ||||||||||||||||| || |||| |
|
|
| T |
9705850 |
aagactaagaaaagagactcacgttacggataaccaacttgactttatgcctgggaagtcgactatggaaacgatctacttacttcgacgcgcgatggag |
9705949 |
T |
|
| Q |
189 |
cgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||| || |||||||||||||| || |||||||||| | |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
9705950 |
cgatatcggacggataaaaaagacttacacttagttttcattgatttggagaaggcgtatgatagagtacctagagagattttgtg |
9706035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 125 - 274
Target Start/End: Original strand, 3629377 - 3629526
Alignment:
| Q |
125 |
atttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagtt |
224 |
Q |
| |
|
||||| |||||||| | |||||||||| |||||| ||| |||||||||||| || ||| |||||||||||| ||| | ||||||||||| || |||||| |
|
|
| T |
3629377 |
atttgattttatgctttggaggtcgacaatggaaatgatctacttacttcggcgtatgatggagcgatatcggacaaacaaaaaagacttacacttagtt |
3629476 |
T |
|
| Q |
225 |
ttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||| | ||||| |||||||||||||| |||||||| ||||||||||| |
|
|
| T |
3629477 |
ttcattgatttgaagaaggcgtatgataaagtacctatggagattttgtg |
3629526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 26290789 - 26290995
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
|||| |||||| ||||||||||||| || |||||||||||||| |||||| |||| || ||||| |||||||||| |||| || |||| |||| || |
|
|
| T |
26290789 |
attgtgcgaatgataggggaattaaccttatgagtcataccataaagttaataaaaagagtgattgaacgaagactaaaaaaagagtctcaagttattga |
26290888 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|| |||| |||||||| ||| ||||||| |||||||| || |||||| |||||| | |||| ||||||||||| ||| | ||||| |||||||| |
|
|
| T |
26290889 |
caatcaatttagttttatgtttggaaggtcga-tatggaagcgatctacttgcttcgatgtgtgatggagcgatatcagacaaaaaaaaaggacttgcac |
26290987 |
T |
|
| Q |
219 |
ttagtttt |
226 |
Q |
| |
|
|||||||| |
|
|
| T |
26290988 |
ttagtttt |
26290995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 253
Target Start/End: Complemental strand, 2681669 - 2681479
Alignment:
| Q |
63 |
aagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaagtga |
162 |
Q |
| |
|
|||||| |||||||||| ||||| ||||| |||||||| |||||| | | |||||| ||||||||||||| ||| | || ||||||||||| || |
|
|
| T |
2681669 |
aagttacgggaaagggtgattgaaggaagattaagaaaagagactcgaggaatggataaccaatttggttttatgtctgtaaagttgactatggaagcga |
2681570 |
T |
|
| Q |
163 |
actacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatag |
253 |
Q |
| |
|
|||||| ||||||| || | ||||||| || | ||||||| ||||||| |||||||||| | |||||| ||||||||||||||| |
|
|
| T |
2681569 |
cttacttagttcgacgtatggtacaacgatatcagacgggtaaaaaatacttgcacttagttttcattgatttggagaaggcgtatgatag |
2681479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 19 - 274
Target Start/End: Complemental strand, 43241658 - 43241403
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| ||||||| |||| || |
|
|
| T |
43241658 |
attgcgtgaattataagggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcaagttacgga |
43241559 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| || ||||||||||||||||| |
|
|
| T |
43241558 |
taaccaatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttgcac |
43241459 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||| | |||||| ||| |||||||||||||||| |||||||||||||| |
|
|
| T |
43241458 |
ttagttttcattgatttggaaaagacgtatgatagagtaccgagagagattttgtg |
43241403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 21 - 274
Target Start/End: Original strand, 8670925 - 8671178
Alignment:
| Q |
21 |
tgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagata |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||| || ||| |||| |||| |
|
|
| T |
8670925 |
tgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatggaaagaaaactaagaaaggagcctcgagttacggata |
8671024 |
T |
|
| Q |
121 |
acttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaatt |
220 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| || ||||||||||||||||| || |
|
|
| T |
8671025 |
aaaaatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttgcactt |
8671124 |
T |
|
| Q |
221 |
agttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||| | |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
8671125 |
agttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtg |
8671178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 23 - 274
Target Start/End: Complemental strand, 51442037 - 51441786
Alignment:
| Q |
23 |
cgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| |||||| |
|
|
| T |
51442037 |
cgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacggataac |
51441938 |
T |
|
| Q |
123 |
ttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattag |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| |||| |||||| || ||||||||||||||||| |||| |
|
|
| T |
51441937 |
caatttggttttatgcctgggaggtcgactatggaagcaatctacttacatcgacgcgtgatggagtgatatcagacggataaaaaagacttgcacttag |
51441838 |
T |
|
| Q |
223 |
ttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||| | |||||| || ||||||||||||||| | ||||||||||||| |
|
|
| T |
51441837 |
ttttcattgatttggaaaaagcgtatgatagagtatcgtgagagattttgtg |
51441786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 49348679 - 49348445
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| || || ||||||||||||| |||||| |||| || |
|
|
| T |
49348679 |
attgcgcgaattataggagaattaagctaatgagtcataccatgaagtcatgggaaagggtgatcgaaagaagactaagaaagaagactcgagttatgga |
49348580 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| || ||||||||||||||||| |
|
|
| T |
49348579 |
taaccaatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttgcac |
49348480 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatag |
253 |
Q |
| |
|
|||||||||| | |||||| ||||||| |||||| |
|
|
| T |
49348479 |
ttagttttcattgatttggaaaaggcgtgtgatag |
49348445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 30 - 274
Target Start/End: Complemental strand, 29173795 - 29173551
Alignment:
| Q |
30 |
tataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttg |
129 |
Q |
| |
|
|||||||||||||| |||||||||| ||| || |||||||| |||||| | ||||| |||| |||||||||| |||||| |||| ||||||| ||||| |
|
|
| T |
29173795 |
tataggggaattaaactaatgagtcgtacaatcaagttatgcgaaaggatgattgaacgaaaactaagaaaagagactcgagttacggataactaatttg |
29173696 |
T |
|
| Q |
130 |
gttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcac |
229 |
Q |
| |
|
||||||||||| |||||||||||||||||| | |||||||||||||| |||| ||||||||||| || ||||||||||||||||| |||||||| | |
|
|
| T |
29173695 |
gttttatgcctaggaggtcgactatggaagcaatttacttacttcgacgtgtgatggagcgatatcagacggataaaaaagacttgcacttagtttttat |
29173596 |
T |
|
| Q |
230 |
ttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
| |||||| |||||||||||||||||| || |||||| ||||||| |
|
|
| T |
29173595 |
tgatttggagaaggcgtatgatagagtgccgagagaggttttgtg |
29173551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 274
Target Start/End: Complemental strand, 32405729 - 32405486
Alignment:
| Q |
27 |
aattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttat |
126 |
Q |
| |
|
|||||||||| |||||| || |||||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||| || |||| |||| || |
|
|
| T |
32405729 |
aattatagggaaattaaccttatgagtcataccatgaagttatgggaaaaggtgattgagcggagactaagaaaa-agattcgagttaccaataatcaat |
32405631 |
T |
|
| Q |
127 |
ttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagtttt |
226 |
Q |
| |
|
|||| ||||||||| | |||||||||||||||| | |||||||||||||| |||| ||| |||||| || ||||||||||| |||| |||||||| |
|
|
| T |
32405630 |
ttggatttatgccttgaaggtcgactatggaagcaatctacttacttcgacatgtgatgga--gatatcagactgataaaaaagatgtgcacttagtttt |
32405533 |
T |
|
| Q |
227 |
cacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|| | |||| || || |||||||||||||| |||||||||||||||| |
|
|
| T |
32405532 |
cattgattt-ggaaaagcgtatgatagagtgtctagagagattttgtg |
32405486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 274
Target Start/End: Original strand, 45833593 - 45833820
Alignment:
| Q |
45 |
ctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctggga |
144 |
Q |
| |
|
|||| ||||||| ||||||||||||| |||| | | |||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||| || || |
|
|
| T |
45833593 |
ctaacgagtcatgccatgaagttatgagaaatgatgattgagcgaagactaaagaaatagactcaagttt--gataactaatttggttttatgtatgaga |
45833690 |
T |
|
| Q |
145 |
ggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggc |
244 |
Q |
| |
|
|| |||||| ||| | ||||||||||||||| |||| |||| ||||| | ||| |||||||||| ||| | ||||||||| | ||||| |||||| |
|
|
| T |
45833691 |
tatcaactatgaaagcaacctacttacttcgacgtgtgatggagtgatattggacaaataaaaaagatttgtatatagttttcattgatttgaagaaggc |
45833790 |
T |
|
| Q |
245 |
gtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
||| |||||||| ||||||| |||||||| |
|
|
| T |
45833791 |
gtacgatagagtgtctagagatattttgtg |
45833820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 11681833 - 11681914
Alignment:
| Q |
26 |
gaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagact |
107 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
11681833 |
gaattataggggaattaagctaaagagtcataccatcaaattatgggaaagggtgattgagcgaagactaagaaaagagact |
11681914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 49 - 253
Target Start/End: Complemental strand, 35829638 - 35829434
Alignment:
| Q |
49 |
tgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtc |
148 |
Q |
| |
|
|||||||||||| ||||||||||||||| || ||||| || ||| |||||||| | |||| |||| ||||| |||| | ||||||||||||||||| |
|
|
| T |
35829638 |
tgagtcataccaagaagttatgggaaagagtgattgaacggagagtaagaaaaaatactcgagttacttataaccaatttagatttatgcctgggaggtc |
35829539 |
T |
|
| Q |
149 |
gactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtat |
248 |
Q |
| |
|
|||||||||||||| |||||||||| |||| ||| ||| | |||| | ||| |||||||||| | || |||||||||| | |||||| |||||| ||| |
|
|
| T |
35829538 |
gactatggaagtgatctacttacttagacgtatgatggaacaatattggacaaataaaaaagatatacacttagttttcattgatttggagaaggcttat |
35829439 |
T |
|
| Q |
249 |
gatag |
253 |
Q |
| |
|
|||| |
|
|
| T |
35829438 |
aatag |
35829434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 274
Target Start/End: Complemental strand, 34828321 - 34828107
Alignment:
| Q |
60 |
atgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaag |
159 |
Q |
| |
|
|||||||||||||||||| | |||||| |||||| ||| ||| ||||| |||| ||| ||||| ||||||| |||||||||| ||| |||| |
|
|
| T |
34828321 |
atgaagttatgggaaaggatgattgagagaagaccaaggaaagagacttgagttatcaatattcaatttgattttatgttagggaggtcgattatagaag |
34828222 |
T |
|
| Q |
160 |
tgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacc |
259 |
Q |
| |
|
|| |||| |||||||||| || |||| ||||||| ||| ||||||| |||| ||| |||||||||| | ||||| ||| | |||||||| ||| | |
|
|
| T |
34828221 |
cgatctacctacttcgacgtacgatggagagatatcggacatataaaaatgactcgcacttagttttcattgatttgaagaatgtgtatgatatagtgtc |
34828122 |
T |
|
| Q |
260 |
tagagagattttgtg |
274 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
34828121 |
taaagagattttgtg |
34828107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 150; Significance: 3e-79; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 18 - 274
Target Start/End: Complemental strand, 15216547 - 15216293
Alignment:
| Q |
18 |
cattgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaag |
117 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| | |
|
|
| T |
15216547 |
cattgcacgaattataggggaattaagctaatgagtcataccatgaagttatgcgaaagggtaattgagcgaagactaagaaaagagactcaagttatgg |
15216448 |
T |
|
| Q |
118 |
ataacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgca |
217 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| ||| || |||||||||||||||| ||| | ||||||||||| |||||||||||||| || |
|
|
| T |
15216447 |
ataatcaatttggttttatgcctgggaggtcgactatgaaagcgatctacttacttcgacgcttgatg--gcgatatcgaatggataaaaaagacttaca |
15216350 |
T |
|
| Q |
218 |
attagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||| | ||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
15216349 |
tttagttttcattgatttgaataaggcgtatgatagagtacctagatagattttgtg |
15216293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 19 - 274
Target Start/End: Original strand, 36544157 - 36544411
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| ||||||| |||| || |
|
|
| T |
36544157 |
attgcgcgaatcataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcaagttacgga |
36544256 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| || ||||||||||| ||||| |
|
|
| T |
36544257 |
taaccaatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgattgagcgatatctgacggataaaaaagatttgcac |
36544356 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||| | |||| || |||||||||||||||||||| ||| |||||||||| |
|
|
| T |
36544357 |
ttagttttcattgattt-ggaaaggcgtatgatagagtaccgagatagattttgtg |
36544411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 40 - 274
Target Start/End: Complemental strand, 42855271 - 42855035
Alignment:
| Q |
40 |
ttaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcc |
139 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||| |
|
|
| T |
42855271 |
ttaagctaatgagtcataccatgaagttatgggaaaggaaaattgagcgaagactaagaaaagagactcgcgttacggataaccaatttggttttatgcc |
42855172 |
T |
|
| Q |
140 |
tgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagat--aaaaaagacttgcaattagttttcacttatttgg |
237 |
Q |
| |
|
||||||||||||||| |||| || |||||||||||||||||||| |||||||||| | || ||| ||||||||||| || |||||||||| | |||||| |
|
|
| T |
42855171 |
tgggaggtcgactattgaagcgatctacttacttcgacgcgtgatggagcgatattggacggataaaaaaaagacttacacttagttttcattgatttgg |
42855072 |
T |
|
| Q |
238 |
ggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
42855071 |
agaaggcatatgatagagtgcctagagatattttgtg |
42855035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 173 - 274
Target Start/End: Complemental strand, 36566364 - 36566263
Alignment:
| Q |
173 |
tcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttg |
272 |
Q |
| |
|
||||||||||| |||||||||||| || ||||||||||||||||| |||||||||| | |||||| |||||||||||||||||| | |||||||||||| |
|
|
| T |
36566364 |
tcgacgcgtgatggagcgatatcggacggataaaaaagacttgcacttagttttcattgatttggaaaaggcgtatgatagagtatcgagagagattttg |
36566265 |
T |
|
| Q |
273 |
tg |
274 |
Q |
| |
|
|| |
|
|
| T |
36566264 |
tg |
36566263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 6184814 - 6184883
Alignment:
| Q |
168 |
ttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttgg |
237 |
Q |
| |
|
||||||||||| |||| |||||||||||| ||||||||||||||||| || |||||||||| | |||||| |
|
|
| T |
6184814 |
ttacttcgacgtgtgatggagcgatatcggacagataaaaaagacttacacttagttttcattgatttgg |
6184883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 13588720 - 13588800
Alignment:
| Q |
27 |
aattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagact |
107 |
Q |
| |
|
||||||| | ||||||| ||||||||||||||||| |||||| |||||| | | |||||||||| |||||||||| ||||| |
|
|
| T |
13588720 |
aattataagtgaattaaactaatgagtcataccataaagttaagggaaatgatgattgagcgaaaactaagaaaagagact |
13588800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 30579305 - 30579245
Alignment:
| Q |
213 |
ttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgt |
273 |
Q |
| |
|
||||| |||||||| | | |||||| ||||||| || ||||||| |||||||||||||||| |
|
|
| T |
30579305 |
ttgcacttagttttaattcatttggagaaggcgaatcatagagtgcctagagagattttgt |
30579245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 148; Significance: 5e-78; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 19 - 274
Target Start/End: Complemental strand, 2076751 - 2076496
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| || |
|
|
| T |
2076751 |
attgcgcgaattataggggaattaagctaacgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacgga |
2076652 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| || |||||||||||| || ||||||||||||||||| |
|
|
| T |
2076651 |
taaccaatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgggatggagcgatatcggacggataaaaaagacttgcac |
2076552 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
||| |||||| | |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
2076551 |
ttaattttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtg |
2076496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 19 - 274
Target Start/End: Original strand, 20317996 - 20318251
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| ||| |
|
|
| T |
20317996 |
attgcgcaaattattagggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacaga |
20318095 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||| || |||||| |||||||||| |
|
|
| T |
20318096 |
taaccaatttggttttatgcctgggaggtcgactatggaagcaatctacttacttcgacgcgtgatggagcgatatcggacggataaataagacttgcac |
20318195 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
20318196 |
ttagttttcattaatttggaaaaggcgtatgatagagtaccgggagagattttgtg |
20318251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 19 - 274
Target Start/End: Original strand, 24177529 - 24177784
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||| || |
|
|
| T |
24177529 |
attgcgtgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacgga |
24177628 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||| ||||| | |||||||||||||||| ||| |||||||||||| || ||||||||||||||||| |
|
|
| T |
24177629 |
taaccaatttggttttatgcctggaaggtcgactacggaagcaatctacttacttcgacgcatgatggagcgatatcggacggataaaaaagacttgcac |
24177728 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||| | ||||| ||||| |||||||||||||| |||||||||||||| |
|
|
| T |
24177729 |
ttagttttcattgatttgaaaaaggcatatgatagagtaccgagagagattttgtg |
24177784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 1288805 - 1288596
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| || || ||||||||||||| |||||| |||| || |
|
|
| T |
1288805 |
attgtgcgaattataggggaattaagttaatgagtcataccatgaagctatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacgga |
1288706 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| ||||||||||||| |||||||||||| | |||||| | |||||||||||||||||||| ||||| |||||| || |||||||||||| |||| |
|
|
| T |
1288705 |
taaccaatttggttttatggctgggaggtcgattgtggaagcaatctacttacttcgacgcgtgatggagcaatatcggacggataaaaaagacatgcac |
1288606 |
T |
|
| Q |
219 |
ttagttttca |
228 |
Q |
| |
|
|||||||||| |
|
|
| T |
1288605 |
ttagttttca |
1288596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 25 - 271
Target Start/End: Original strand, 26970 - 27215
Alignment:
| Q |
25 |
cgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataactt |
124 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |||| | |||| ||||| |||| | |||||||| ||||| |||| |||||| |
|
|
| T |
26970 |
cgaattataggggaattaaattaatgagtcataccatgaagtcatggaagcgggtgattgaacgaaaattaagaaaaaagacttgagttactgataacca |
27069 |
T |
|
| Q |
125 |
atttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagtt |
224 |
Q |
| |
|
||||||||||||| || || ||||||||||||| || ||||||||||| ||| |||| | ||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
27070 |
ttttggttttatgcttga-agatcgactatggaagcgatctacttacttcaacgtgtgatgaagcgatatcgaacggataaaaaagacttgcacttagtt |
27168 |
T |
|
| Q |
225 |
ttcacttatttggggaaggcgtatgatagagtacctagagagatttt |
271 |
Q |
| |
|
|||| | |||||| ||||||| |||||||| | |||| ||||||||| |
|
|
| T |
27169 |
ttcattgatttggagaaggcgaatgatagatttcctaaagagatttt |
27215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 22832161 - 22832091
Alignment:
| Q |
29 |
ttataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaa |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| |
|
|
| T |
22832161 |
ttataggggaattaagctaatgagtcataccatgaagttatgggaaaaagtgattgaatgaagactaagaa |
22832091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 274
Target Start/End: Original strand, 37123591 - 37123831
Alignment:
| Q |
35 |
gggaattaagctaatgagtcataccatgaagttatgggaaagg--gtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggtt |
132 |
Q |
| |
|
|||| |||| || |||| ||||||||||||||||||| ||| || ||||| |||||||||||||| ||||||| |||| | ||| | |||||| |
|
|
| T |
37123591 |
gggagttaaacttatgattcataccatgaagttatggaaaaaaaagtgattgaatgaagactaagaaaagagactcaagttattgttaatcaaattggtt |
37123690 |
T |
|
| Q |
133 |
ttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcactta |
232 |
Q |
| |
|
|||||| || || |||||| || ||||||| ||||||||| | ||| ||||| ||||||| |||| ||||||||||| |||| |||||||||| | | |
|
|
| T |
37123691 |
ttatgcttgagatgtcgaccatagaagtgatctacttactacaacgtatgagg-agcgataacgaatggataaaaaagatgtgcacttagttttcattga |
37123789 |
T |
|
| Q |
233 |
tttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
||||| ||| |||||||||||| |||| |||||||||||| |
|
|
| T |
37123790 |
tttggagaaactgtatgatagagttcctaaagagattttgtg |
37123831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 25937109 - 25937183
Alignment:
| Q |
27 |
aattataggggaattaagctaatgagtcataccatgaagttatggg-aaagggtaattgagcgaagactaagaaa |
100 |
Q |
| |
|
||||||||| |||||| || |||| |||||||||||||||||||| ||||| ||||||||||||||||| |||| |
|
|
| T |
25937109 |
aattataggacaattaaacttatgattcataccatgaagttatgggaaaaggttaattgagcgaagactacgaaa |
25937183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 756214 - 756080
Alignment:
| Q |
36 |
ggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggtttta |
135 |
Q |
| |
|
|||||||| || | ||||| ||||| |||||||||||||| || |||||||| |||| ||||||| ||||||| | ||| ||||| |||| ||||| |
|
|
| T |
756214 |
ggaattaaacttaagagtcgtaccaacaagttatgggaaagagtgattgagcggagacaaagaaaagagactcaaggtaacgataatcaatttaatttta |
756115 |
T |
|
| Q |
136 |
tgcctgggaggtcgactatggaagtgaactactta |
170 |
Q |
| |
|
|||||| ||||| || ||||||| || ||||||| |
|
|
| T |
756114 |
tgcctgagaggttaacaatggaagcgatctactta |
756080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 148; Significance: 5e-78; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 19 - 274
Target Start/End: Complemental strand, 51448986 - 51448731
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||| |||||| |||| || |
|
|
| T |
51448986 |
attgcgcgaattataggggaattaagctaatgagtcataccataaagttatgggaaagggtgatcgaaagaagactaagaaaggagactcgagttacgga |
51448887 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||| | ||| |||||||||||||||| |||||||||||| || ||||||||||||||||| |
|
|
| T |
51448886 |
taaccaatttggttttatacctgggaggtcgactatggaagcaatctatttacttcgacgcgtgatggagcgatatcggacggataaaaaagacttgcac |
51448787 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
51448786 |
ttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtg |
51448731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 19 - 274
Target Start/End: Original strand, 52137833 - 52138088
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| ||||| ||| || |||| || |
|
|
| T |
52137833 |
attgtgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtgatcgaaagaagactcagaaaggagattcgagttacgga |
52137932 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||| ||| | |||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
52137933 |
taaccaatttggttttatgcctgggaggtcgaatatgaaagcaatctacttacttcgacgcgtgatggagcgatatcggacagataaaaaagacttgcac |
52138032 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||||||| | |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
52138033 |
ttagttttcattgatttggaaaaggcgtatgatagagtaccgagagagattttgtg |
52138088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 19 - 256
Target Start/End: Original strand, 38849107 - 38849344
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||| |||||| |||| ||| |
|
|
| T |
38849107 |
attgcgcgaattataagggaattaaactaatgagtcataccatgaagttatgggaaagagtgattgaacgaaggctaagaaaagagactcgggttacaga |
38849206 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaa |
218 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||||||||| | |||||||||| ||||| ||| |||| ||| ||| || ||||||||| |||| || |
|
|
| T |
38849207 |
taactaattttcttttatgcctgggaggtcgactatggaagcggtctacttactttgacgcttgacggagtgatgtcggacggataaaaaacacttacac |
38849306 |
T |
|
| Q |
219 |
ttagttttcacttatttggggaaggcgtatgatagagt |
256 |
Q |
| |
|
|||||||||| | |||||| ||||||||| |||||||| |
|
|
| T |
38849307 |
ttagttttcattgatttggagaaggcgtaagatagagt |
38849344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 269
Target Start/End: Original strand, 3368775 - 3369016
Alignment:
| Q |
26 |
gaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataactta |
125 |
Q |
| |
|
||||||||| ||||||| || || | ||||||||||||||||||||||| || ||||| ||||||||||||||| |||||| |||| |||| | | |
|
|
| T |
3368775 |
gaattatagaagaattaaacttataattcataccatgaagttatgggaaaatgtgattgaacgaagactaagaaaagagactcgagttacttataattaa |
3368874 |
T |
|
| Q |
126 |
tttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagat-aaaaaagacttgcaattagtt |
224 |
Q |
| |
|
||| ||| | ||| || ||| ||||||||| |||| | |||| ||||||||||| ||| ||||| ||||| || ||| |||||||||||||| |||||| |
|
|
| T |
3368875 |
tttagttatttgcttgtgagatcgactatgaaagttatctacctacttcgacgcatgatggagcaatatcagacggataaaaaaagacttgcacttagtt |
3368974 |
T |
|
| Q |
225 |
ttcacttatttggggaaggcgtatgatagagtacctagagagatt |
269 |
Q |
| |
|
||| | |||||| ||| |||||||||||| |||||||||||| |
|
|
| T |
3368975 |
ttctttgatttgg---aggtgtatgatagagtgcctagagagatt |
3369016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 27916583 - 27916753
Alignment:
| Q |
19 |
attgcgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaaga |
118 |
Q |
| |
|
|||||| ||||||||||||| ||| | ||||||||||||||||||||||| |||||||| ||||| |||||| |||||||| |||| || |||| || |
|
|
| T |
27916583 |
attgcgtgaattataggggatataaattgatgagtcataccatgaagttatgagaaagggtgattgaacgaagaataagaaaagagacccaagttagtga |
27916682 |
T |
|
| Q |
119 |
taacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcga |
191 |
Q |
| |
|
|||| ||||||||||||| || |||||||| ||||| |||| |||||||||| ||| |||| ||||||| |
|
|
| T |
27916683 |
taaccaatttggttttatgtct--aaggtcgaccatggatgtgatttacttacttccacgtgtgatggagcga |
27916753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 48220971 - 48221038
Alignment:
| Q |
204 |
aaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagatttt |
271 |
Q |
| |
|
|||||||||||||| |||||||||| | |||||| ||| ||||||||||| | |||||||| ||||| |
|
|
| T |
48220971 |
aaaaaagacttgcacttagttttcattgatttggagaaaacgtatgatagattgcctagagatatttt |
48221038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 50630414 - 50630343
Alignment:
| Q |
201 |
gataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
||||||||||||||||| |||||||||| | |||||| |||||| |||| ||||| ||| |||| |||||||| |
|
|
| T |
50630414 |
gataaaaaagacttgcacttagttttcattgatttggagaaggcatatg--agagtgcctcgagatattttgtg |
50630343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0113 (Bit Score: 136; Significance: 7e-71; HSPs: 1)
Name: scaffold0113
Description:
Target: scaffold0113; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 23 - 274
Target Start/End: Complemental strand, 13531 - 13280
Alignment:
| Q |
23 |
cgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataac |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||| | |||||| |||| |||||| |
|
|
| T |
13531 |
cgcgaattataggggaattaagctaatgagtcataccatgaagttatgggaaatggtgattgaacgaagactaagagagaagactccagttacggataac |
13432 |
T |
|
| Q |
123 |
ttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattag |
222 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||||||||| || ||||| |||||||| || |||| |
|
|
| T |
13431 |
caatttggttttatgcttgggaggtcgactatggaaacgatctacttacttcgacgcgtggtggagcgatatatgacggataataaagacttacacttag |
13332 |
T |
|
| Q |
223 |
ttttcacttatttggggaaggcgtatgatagagtacctagagagattttgtg |
274 |
Q |
| |
|
|||||| | |||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13331 |
ttttcattgatttggagaaggcgtatgatagagttcctagagagattttgtg |
13280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0018 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0018
Description:
Target: scaffold0018; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 66 - 274
Target Start/End: Original strand, 30520 - 30728
Alignment:
| Q |
66 |
ttatgggaaagggtaattgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaagtgaact |
165 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||||| | || |
|
|
| T |
30520 |
ttatgggaaagggtgattgaaagaagactaagaaaggagactcgagttacggataaccaatttggttttatgcctgggaggtcgactatggaagcaatct |
30619 |
T |
|
| Q |
166 |
acttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagtacctagaga |
265 |
Q |
| |
|
||||||||| |||||||| | ||||||||| || ||||||||||||||||| |||||||||| | | |||| |||||||||||||||||||| ||||| |
|
|
| T |
30620 |
acttacttcaacgcgtgatgaagcgatatcagacggataaaaaagacttgcacttagttttcattgaattggaaaaggcgtatgatagagtaccgagaga |
30719 |
T |
|
| Q |
266 |
gattttgtg |
274 |
Q |
| |
|
||||||||| |
|
|
| T |
30720 |
gattttgtg |
30728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 256
Target Start/End: Complemental strand, 90297 - 90130
Alignment:
| Q |
89 |
aagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggag |
188 |
Q |
| |
|
||||||||||||| |||||| |||| |||||| ||||| ||||||||| |||||||| ||||||||||||| ||||||| |||||| ||| ||| |
|
|
| T |
90297 |
aagactaagaaaagagactcgagttacggataaccaatttgattttatgccagggaggtcaactatggaagtgatctacttaattcgacatgtggtcgag |
90198 |
T |
|
| Q |
189 |
cgatatcgaacagataaaaaagacttgcaattagttttcacttatttggggaaggcgtatgatagagt |
256 |
Q |
| |
|
|| ||||| || |||||||||||||| || |||||||||| | |||||| |||||||||||||||||| |
|
|
| T |
90197 |
cgttatcggacggataaaaaagacttacacttagttttcattgatttggagaaggcgtatgatagagt |
90130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0171
Description:
Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 252
Target Start/End: Original strand, 5568 - 5685
Alignment:
| Q |
135 |
atgcctgggaggtcgactatggaagtgaactacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttcacttatt |
234 |
Q |
| |
|
|||| ||||||||||| ||| |||| || | ||||||| ||| |||| |||||||||| || ||||||||| | | ||| |||||||||| ||||| |
|
|
| T |
5568 |
atgcatgggaggtcgaatatcgaagcgatttccttacttaaacgtgtgatggagcgatatttgactgataaaaaacaatcgcacttagttttcatttatt |
5667 |
T |
|
| Q |
235 |
tggggaaggcgtatgata |
252 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
5668 |
tggagaaggcgtatgata |
5685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0220 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0220
Description:
Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 25340 - 25277
Alignment:
| Q |
165 |
tacttacttcgacgcgtgagggagcgatatcgaacagataaaaaagacttgcaattagttttca |
228 |
Q |
| |
|
|||||||||||||| ||| ||| |||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
25340 |
tacttacttcgacgtttgatagagtgatatcaaacagataaaaaagacttgcacctagttttca |
25277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0140 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0140
Description:
Target: scaffold0140; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 15001 - 14931
Alignment:
| Q |
81 |
attgagcgaagactaagaaaatagactcatgttaaagataacttatttggttttatgcctgggaggtcgac |
151 |
Q |
| |
|
|||||||||||||||| |||| |||||||| ||| |||| | ||||||||||||| || |||||||||| |
|
|
| T |
15001 |
attgagcgaagactaataaaagagactcatattatcaataattaatttggttttatgtctaggaggtcgac |
14931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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