View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12841_low_57 (Length: 222)
Name: NF12841_low_57
Description: NF12841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12841_low_57 |
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Alignment Details
Target: chr7 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 73 - 205
Target Start/End: Original strand, 10188286 - 10188417
Alignment:
| Q |
73 |
gtattgaaatatttttcttgaaaaattattcatcccacaaattaaggtgacaatgactaaatgaagctaattttagaaaaagtcataaccatcaacaaaa |
172 |
Q |
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| T |
10188286 |
gtattgaaatatttttcttgaaaaattattcatcacacaaattaaggtgacaatgactaaatgaagctaattttagaaaaagtcataaccatcaacaaaa |
10188385 |
T |
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| Q |
173 |
agtgccacttctaactctaacacctaagaaatt |
205 |
Q |
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|||||||||||||||||| |||||||||||||| |
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| T |
10188386 |
agtgccacttctaactct-acacctaagaaatt |
10188417 |
T |
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