View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12842_low_15 (Length: 342)
Name: NF12842_low_15
Description: NF12842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12842_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 41 - 329
Target Start/End: Original strand, 45805947 - 45806235
Alignment:
| Q |
41 |
agtgattgaatcctgattttagtcctgaaatttagagattagataatttgatatgaaattaaaaaacctccttgatcctgttgatagtctggtcaagtta |
140 |
Q |
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| T |
45805947 |
agtgattgaattctgattttagtcctgaaatttagagattagataatttgatatgaaattaaaaaacctccttgatcctgttgataggctggtcaattta |
45806046 |
T |
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| Q |
141 |
gtcatttagatcatctcaaagtggctaatgtgattgagcattttcaattcagtgatcgtgttagaattttgtttatgtctgaccctacaatttcgaggac |
240 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
45806047 |
gtcattgagatcatctcaaagtggctaatgtgattgagcattttcaattcagtgatcgtgttagaattttgtttatgtctgaccctacaattttgaggac |
45806146 |
T |
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| Q |
241 |
taaataatgaattcttagatgtctaactcgtgattatgttccccgtttgtgtaatcgtgcaaccaagttatcctgtattgtttccgtct |
329 |
Q |
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||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
45806147 |
taaataatgaattgttagatgtctaacttgtgattatgttccccgtttgtgtaattgtgcaaccaagttatcctgtattgtttccgtct |
45806235 |
T |
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