View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12843_high_2 (Length: 464)
Name: NF12843_high_2
Description: NF12843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12843_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 450; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 2 - 451
Target Start/End: Original strand, 46723490 - 46723939
Alignment:
| Q |
2 |
cacctgagcccaccggcctccagaatgagtaacaaacttcgcacgaggaagagcaccagcaacccgattcccttcactgctccattcttcagaccaatca |
101 |
Q |
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| T |
46723490 |
cacctgagcccaccggcctccagaatgagtaacaaacttcgcacgaggaagagcaccagcaacccgattcccttcactgctccattcttcagaccaatca |
46723589 |
T |
|
| Q |
102 |
ctagaccagatcagttgcattggcatatctttcaatcgatcagaacaaccccattcagttaaatcaaagctagaattcaaattcttgccaatagccacaa |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46723590 |
ctagaccagatcagttgcattggcatatctttcaatcgatcagaacaaccccattcagttaaatcaaagctagaattcaaattcttgccaatagccacaa |
46723689 |
T |
|
| Q |
202 |
ccgctttccttccatccccagacttcaacagcaccctatgtgcatcagcatccaaaccaccaattctcttagaacagtaaaaattcaccacctttgcaaa |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46723690 |
ccgctttccttccatccccagacttcaacagcaccctatgtgcatcagcatccaaaccaccaattctcttagaacagtaaaaattcaccacctttgcaaa |
46723789 |
T |
|
| Q |
302 |
aacataaggaaaccctaaaaccacctctctaatcaaaggaacatccaaaacccaaataggaaaagcacccaaatttgaaggcggcacaggcgtatcaaca |
401 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46723790 |
aacataaggaaaccctaaaaccacctctctaatcaaaggaacatccaaaacccaaataggaaaagcacccaaatttgaaggcggcacaggcgtatcaaca |
46723889 |
T |
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| Q |
402 |
agtgtcaaacttgaaaccaaatctgaattctcagaaacccaatttgcagt |
451 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46723890 |
agtgtcaaacttgaaaccaaatctgaattctcagaaacccaatttgcagt |
46723939 |
T |
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