View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12844_high_6 (Length: 247)
Name: NF12844_high_6
Description: NF12844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12844_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 36773725 - 36773506
Alignment:
| Q |
18 |
gtaattgcatatcattatttacagcattgtagtagtatgaatatctcttattccattgcataaaaataaaaatagtatttgacacattttgatagttaca |
117 |
Q |
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| T |
36773725 |
gtaattgcatatcattatttacagcattgtagtagtatgaatatctcttattccattgcataaaaataaaaatagtatttgacacattttgatagttaca |
36773626 |
T |
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| Q |
118 |
tatttccattttgatatatcaaaaaattttacattactttagaatcaagcctaagtataatttttaaacacacttttaaaggaaaaaccctatgatgacc |
217 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36773625 |
tatttccattttgatatatcaaaaaaatttacattactttagaatcaagcctaagtataatttttaaacacacttttaaaggaaaaaccctatgatgacc |
36773526 |
T |
|
| Q |
218 |
cgattttcattcaacctatg |
237 |
Q |
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|||||||| ||||||||||| |
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| T |
36773525 |
cgattttcgttcaacctatg |
36773506 |
T |
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