View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12846_high_6 (Length: 274)

Name: NF12846_high_6
Description: NF12846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12846_high_6
NF12846_high_6
[»] scaffold0001 (2 HSPs)
scaffold0001 (35-264)||(84443-84672)
scaffold0001 (49-103)||(447410-447464)
[»] chr3 (33 HSPs)
chr3 (49-264)||(45219413-45219628)
chr3 (30-147)||(23275516-23275634)
chr3 (49-169)||(21838303-21838424)
chr3 (27-167)||(43927937-43928079)
chr3 (30-121)||(19039478-19039570)
chr3 (19-167)||(36167480-36167629)
chr3 (30-103)||(17738177-17738250)
chr3 (49-167)||(21619331-21619451)
chr3 (16-75)||(8899638-8899697)
chr3 (16-75)||(16282046-16282105)
chr3 (16-75)||(38961125-38961184)
chr3 (52-122)||(28195507-28195578)
chr3 (16-75)||(41124754-41124813)
chr3 (24-75)||(13937270-13937321)
chr3 (16-75)||(13938268-13938327)
chr3 (19-102)||(53300797-53300879)
chr3 (49-103)||(10557724-10557778)
chr3 (48-123)||(10551298-10551374)
chr3 (28-75)||(15471816-15471863)
chr3 (49-103)||(11202218-11202272)
chr3 (29-169)||(22109463-22109603)
chr3 (29-94)||(23412357-23412422)
chr3 (31-75)||(17444066-17444110)
chr3 (29-83)||(22792179-22792232)
chr3 (30-75)||(24339922-24339967)
chr3 (49-94)||(45798087-45798132)
chr3 (30-97)||(22146750-22146817)
chr3 (49-169)||(37250318-37250440)
chr3 (49-103)||(325075-325129)
chr3 (49-103)||(9578542-9578596)
chr3 (49-95)||(50243816-50243862)
chr3 (49-94)||(14502072-14502117)
chr3 (49-97)||(13522203-13522251)
[»] chr1 (28 HSPs)
chr1 (49-264)||(43629298-43629513)
chr1 (49-169)||(12272418-12272538)
chr1 (49-169)||(50687440-50687561)
chr1 (44-169)||(27652388-27652514)
chr1 (30-122)||(14294710-14294803)
chr1 (30-122)||(51131433-51131526)
chr1 (16-75)||(40129706-40129765)
chr1 (49-122)||(21342968-21343042)
chr1 (49-122)||(21347833-21347907)
chr1 (22-75)||(41230914-41230967)
chr1 (24-75)||(22122143-22122194)
chr1 (49-103)||(15859318-15859372)
chr1 (30-98)||(50613221-50613289)
chr1 (30-98)||(50621049-50621117)
chr1 (49-99)||(21683897-21683947)
chr1 (17-75)||(31613363-31613421)
chr1 (49-103)||(52940028-52940082)
chr1 (49-94)||(16382041-16382086)
chr1 (30-75)||(21473819-21473864)
chr1 (49-169)||(41049173-41049295)
chr1 (49-103)||(13880539-13880593)
chr1 (49-103)||(20959026-20959080)
chr1 (49-103)||(48521408-48521462)
chr1 (51-166)||(16093024-16093141)
chr1 (105-169)||(26065768-26065832)
chr1 (30-66)||(20919502-20919538)
chr1 (19-97)||(22129998-22130075)
chr1 (49-85)||(26065876-26065912)
[»] chr8 (26 HSPs)
chr8 (49-169)||(14102353-14102473)
chr8 (30-169)||(13507214-13507355)
chr8 (30-169)||(13596746-13596887)
chr8 (27-169)||(22365484-22365627)
chr8 (31-169)||(24353894-24354033)
chr8 (49-127)||(40492029-40492108)
chr8 (30-173)||(17266126-17266270)
chr8 (19-103)||(19936212-19936295)
chr8 (49-167)||(26222332-26222452)
chr8 (49-123)||(26220546-26220621)
chr8 (16-75)||(20404094-20404153)
chr8 (117-169)||(39834506-39834558)
chr8 (49-94)||(39834559-39834604)
chr8 (16-75)||(32810509-32810568)
chr8 (29-83)||(5609825-5609878)
chr8 (30-122)||(22966830-22966924)
chr8 (44-147)||(20499456-20499561)
chr8 (50-103)||(22984559-22984612)
chr8 (49-169)||(17438665-17438787)
chr8 (49-123)||(2418004-2418078)
chr8 (49-103)||(20501231-20501285)
chr8 (49-103)||(22996708-22996762)
chr8 (49-103)||(28398485-28398539)
chr8 (49-147)||(7464905-7465005)
chr8 (30-94)||(19800612-19800675)
chr8 (19-75)||(38854425-38854480)
[»] chr7 (28 HSPs)
chr7 (49-169)||(15113792-15113912)
chr7 (49-169)||(16324800-16324920)
chr7 (49-169)||(15117318-15117438)
chr7 (49-169)||(14037047-14037168)
chr7 (49-169)||(14347077-14347198)
chr7 (49-169)||(14045619-14045740)
chr7 (49-169)||(14355649-14355770)
chr7 (30-167)||(10062865-10063004)
chr7 (49-169)||(1867234-1867355)
chr7 (30-122)||(16496270-16496363)
chr7 (49-123)||(9176836-9176911)
chr7 (49-167)||(48274432-48274552)
chr7 (49-123)||(3387442-3387517)
chr7 (16-71)||(21188893-21188948)
chr7 (49-90)||(17180530-17180571)
chr7 (24-75)||(11973170-11973221)
chr7 (49-169)||(15007650-15007772)
chr7 (49-152)||(11768091-11768194)
chr7 (49-92)||(16092396-16092439)
chr7 (29-97)||(1856382-1856450)
chr7 (29-97)||(13917554-13917622)
chr7 (28-94)||(68597-68664)
chr7 (49-83)||(15440214-15440248)
chr7 (49-103)||(16997089-16997143)
chr7 (49-103)||(37793393-37793447)
chr7 (49-103)||(42462868-42462922)
chr7 (29-83)||(47832692-47832745)
chr7 (49-94)||(18304654-18304699)
[»] scaffold0072 (2 HSPs)
scaffold0072 (49-169)||(62332-62452)
scaffold0072 (49-98)||(58735-58784)
[»] scaffold0009 (1 HSPs)
scaffold0009 (49-169)||(86389-86509)
[»] chr2 (22 HSPs)
chr2 (49-165)||(22458691-22458807)
chr2 (49-169)||(23792124-23792245)
chr2 (31-169)||(19672697-19672837)
chr2 (49-169)||(25109718-25109839)
chr2 (30-169)||(23005600-23005740)
chr2 (30-167)||(43138207-43138346)
chr2 (15-75)||(41523168-41523228)
chr2 (16-75)||(6726862-6726921)
chr2 (49-123)||(24941576-24941651)
chr2 (16-75)||(25616602-25616661)
chr2 (16-75)||(24368642-24368701)
chr2 (49-103)||(26393319-26393373)
chr2 (49-103)||(27845554-27845608)
chr2 (49-169)||(20519322-20519444)
chr2 (49-137)||(23208179-23208268)
chr2 (19-75)||(21154106-21154162)
chr2 (49-103)||(18546144-18546198)
chr2 (30-89)||(298026-298085)
chr2 (29-99)||(18785992-18786062)
chr2 (49-103)||(7187421-7187475)
chr2 (29-75)||(23705463-23705508)
chr2 (28-64)||(23286752-23286788)
[»] chr5 (18 HSPs)
chr5 (49-169)||(22177348-22177469)
chr5 (49-167)||(18318185-18318305)
chr5 (44-122)||(36315421-36315500)
chr5 (49-169)||(27988106-27988227)
chr5 (49-123)||(20765231-20765306)
chr5 (16-75)||(20917135-20917194)
chr5 (16-75)||(32028840-32028899)
chr5 (28-103)||(26739777-26739852)
chr5 (27-66)||(22075858-22075897)
chr5 (49-103)||(21327424-21327478)
chr5 (29-75)||(22144941-22144986)
chr5 (53-103)||(26731989-26732039)
chr5 (30-94)||(21870784-21870848)
chr5 (30-94)||(21875064-21875128)
chr5 (29-75)||(5888372-5888417)
chr5 (28-66)||(8286057-8286095)
chr5 (19-94)||(1097339-1097415)
chr5 (49-127)||(24068244-24068324)
[»] chr4 (18 HSPs)
chr4 (30-169)||(53081285-53081425)
chr4 (16-84)||(51462998-51463066)
chr4 (49-167)||(54797887-54798007)
chr4 (24-97)||(52313547-52313620)
chr4 (51-103)||(14281265-14281317)
chr4 (16-75)||(11736-11795)
chr4 (29-75)||(43197821-43197867)
chr4 (24-66)||(23373711-23373753)
chr4 (49-94)||(32852324-32852369)
chr4 (49-147)||(11024-11124)
chr4 (49-103)||(12611906-12611960)
chr4 (28-66)||(12903646-12903684)
chr4 (49-103)||(14852025-14852079)
chr4 (49-103)||(23802407-23802461)
chr4 (49-103)||(26790252-26790306)
chr4 (30-75)||(15372067-15372112)
chr4 (30-75)||(15374359-15374404)
chr4 (49-169)||(52242419-52242542)
[»] scaffold1403 (1 HSPs)
scaffold1403 (29-169)||(1369-1509)
[»] scaffold0123 (1 HSPs)
scaffold0123 (30-169)||(25928-26068)
[»] scaffold0114 (1 HSPs)
scaffold0114 (31-169)||(46225-46365)
[»] scaffold0090 (1 HSPs)
scaffold0090 (49-169)||(2861-2982)
[»] chr6 (16 HSPs)
chr6 (48-167)||(21119806-21119927)
chr6 (49-167)||(16447755-16447875)
chr6 (49-167)||(19102463-19102583)
chr6 (16-75)||(1599056-1599115)
chr6 (49-123)||(3850997-3851072)
chr6 (49-122)||(19024272-19024346)
chr6 (49-103)||(23527301-23527355)
chr6 (16-55)||(22387648-22387687)
chr6 (29-163)||(23665036-23665172)
chr6 (30-97)||(23531878-23531945)
chr6 (49-103)||(14978544-14978598)
chr6 (49-103)||(18697427-18697481)
chr6 (49-169)||(19669250-19669371)
chr6 (49-103)||(25618901-25618955)
chr6 (38-75)||(27332500-27332537)
chr6 (38-75)||(27393240-27393277)
[»] scaffold0420 (1 HSPs)
scaffold0420 (48-169)||(5460-5583)
[»] scaffold0076 (1 HSPs)
scaffold0076 (43-169)||(22494-22621)
[»] scaffold0138 (1 HSPs)
scaffold0138 (49-169)||(17366-17488)
[»] scaffold0184 (1 HSPs)
scaffold0184 (30-122)||(229-322)
[»] scaffold0005 (1 HSPs)
scaffold0005 (49-169)||(268499-268620)
[»] scaffold0022 (3 HSPs)
scaffold0022 (32-123)||(128082-128174)
scaffold0022 (44-169)||(81121-81246)
scaffold0022 (49-103)||(117445-117499)
[»] scaffold0008 (2 HSPs)
scaffold0008 (49-123)||(72554-72629)
scaffold0008 (49-147)||(13753-13853)
[»] scaffold0139 (1 HSPs)
scaffold0139 (49-169)||(39166-39288)
[»] scaffold0053 (1 HSPs)
scaffold0053 (16-75)||(60751-60810)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-75)||(185084-185143)
[»] scaffold0601 (1 HSPs)
scaffold0601 (49-122)||(7552-7626)
[»] scaffold0261 (1 HSPs)
scaffold0261 (28-94)||(17448-17514)
[»] scaffold0130 (1 HSPs)
scaffold0130 (29-147)||(887-1007)
[»] scaffold0323 (1 HSPs)
scaffold0323 (16-75)||(11889-11948)
[»] scaffold0098 (1 HSPs)
scaffold0098 (19-94)||(29634-29709)
[»] scaffold0042 (1 HSPs)
scaffold0042 (16-75)||(43136-43195)
[»] scaffold0914 (1 HSPs)
scaffold0914 (49-103)||(2641-2695)
[»] scaffold0320 (1 HSPs)
scaffold0320 (29-169)||(12790-12932)
[»] scaffold0014 (2 HSPs)
scaffold0014 (44-103)||(79307-79367)
scaffold0014 (25-84)||(203517-203576)
[»] scaffold0010 (2 HSPs)
scaffold0010 (49-163)||(59887-60003)
scaffold0010 (47-103)||(7206-7262)
[»] scaffold0004 (1 HSPs)
scaffold0004 (49-103)||(333234-333288)
[»] scaffold0413 (1 HSPs)
scaffold0413 (29-147)||(13462-13582)
[»] scaffold0439 (1 HSPs)
scaffold0439 (49-97)||(12397-12445)
[»] scaffold0231 (1 HSPs)
scaffold0231 (19-75)||(11298-11353)
[»] scaffold0046 (4 HSPs)
scaffold0046 (49-147)||(16086-16186)
scaffold0046 (49-147)||(25273-25373)
scaffold0046 (30-66)||(11868-11904)
scaffold0046 (30-66)||(15378-15414)
[»] scaffold0011 (2 HSPs)
scaffold0011 (49-152)||(37284-37387)
scaffold0011 (28-66)||(167172-167210)
[»] scaffold0925 (1 HSPs)
scaffold0925 (16-55)||(1814-1853)
[»] scaffold0106 (1 HSPs)
scaffold0106 (52-103)||(18857-18908)
[»] scaffold1835 (1 HSPs)
scaffold1835 (49-103)||(204-258)
[»] scaffold0347 (1 HSPs)
scaffold0347 (49-103)||(9798-9852)
[»] scaffold0169 (1 HSPs)
scaffold0169 (49-103)||(28697-28751)
[»] scaffold0162 (1 HSPs)
scaffold0162 (49-169)||(25476-25597)
[»] scaffold0247 (1 HSPs)
scaffold0247 (30-75)||(17227-17272)
[»] scaffold0051 (1 HSPs)
scaffold0051 (28-97)||(32145-32214)
[»] scaffold0044 (1 HSPs)
scaffold0044 (49-113)||(4673-4738)
[»] scaffold0192 (1 HSPs)
scaffold0192 (30-94)||(10783-10846)
[»] scaffold0084 (1 HSPs)
scaffold0084 (19-94)||(11029-11105)
[»] scaffold0075 (1 HSPs)
scaffold0075 (49-147)||(50747-50847)
[»] scaffold0021 (2 HSPs)
scaffold0021 (49-166)||(135527-135646)
scaffold0021 (49-166)||(144235-144354)
[»] scaffold0273 (1 HSPs)
scaffold0273 (30-85)||(8623-8677)
[»] scaffold0007 (2 HSPs)
scaffold0007 (32-103)||(163541-163612)
scaffold0007 (30-103)||(160260-160333)
[»] scaffold1842 (1 HSPs)
scaffold1842 (28-66)||(242-280)
[»] scaffold1419 (1 HSPs)
scaffold1419 (49-103)||(953-1007)
[»] scaffold0357 (2 HSPs)
scaffold0357 (49-99)||(4866-4916)
scaffold0357 (30-75)||(14097-14141)
[»] scaffold0319 (1 HSPs)
scaffold0319 (28-66)||(12266-12304)
[»] scaffold0180 (1 HSPs)
scaffold0180 (49-99)||(31371-31421)
[»] scaffold0163 (1 HSPs)
scaffold0163 (49-102)||(26413-26467)
[»] scaffold0145 (1 HSPs)
scaffold0145 (49-103)||(10734-10788)
[»] scaffold0107 (1 HSPs)
scaffold0107 (49-103)||(13553-13607)
[»] scaffold0013 (1 HSPs)
scaffold0013 (19-85)||(31145-31210)
[»] scaffold0012 (1 HSPs)
scaffold0012 (49-103)||(220335-220389)
[»] scaffold0598 (1 HSPs)
scaffold0598 (30-87)||(248-305)
[»] scaffold0333 (2 HSPs)
scaffold0333 (30-75)||(7505-7549)
scaffold0333 (30-75)||(14885-14929)
[»] scaffold0235 (1 HSPs)
scaffold0235 (49-94)||(14510-14555)
[»] scaffold0142 (1 HSPs)
scaffold0142 (49-94)||(1637-1682)
[»] scaffold0020 (1 HSPs)
scaffold0020 (38-75)||(15040-15077)
[»] scaffold1439 (1 HSPs)
scaffold1439 (44-84)||(1090-1130)
[»] scaffold0530 (1 HSPs)
scaffold0530 (49-85)||(231-267)
[»] scaffold0293 (1 HSPs)
scaffold0293 (49-97)||(19301-19349)
[»] scaffold0243 (1 HSPs)
scaffold0243 (49-85)||(5325-5361)
[»] scaffold0034 (1 HSPs)
scaffold0034 (27-75)||(33386-33433)


Alignment Details
Target: scaffold0001 (Bit Score: 222; Significance: 1e-122; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 35 - 264
Target Start/End: Original strand, 84443 - 84672
Alignment:
Q  35 gatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaag 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  84443 gatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaag 84542  T
Q  135 ttggagaattaggttaaagcgaggaattgatgatttattcatagtgggtgccaattttgttgtcgtgcctgataacatgatccgtgagaataccaggatt 234  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  84543 ttggagaattaggttaaagtgaggaattgatgatttattcatagtgggtgccaattttgttgtcgtgcctgataacatgatccgtgagaatactaggatt 84642  T
Q  235 tgtatgattcttattatgtaattgattctt 264  Q
    ||||||||||||||||||||||||||||||    
T  84643 tgtatgattcttattatgtaattgattctt 84672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 447464 - 447410
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| || | |||||||||||||    
T  447464 aaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgatta 447410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 49 - 264
Target Start/End: Original strand, 45219413 - 45219628
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaagttggagaattaggt 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45219413 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaatttaacaagagtaggattaatttaaggaagttggagaattaggt 45219512  T
Q  149 taaagcgaggaattgatgatttattcatagtgggtgccaattttgttgtcgtgcctgataacatgatccgtgagaataccaggatttgtatgattcttat 248  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  45219513 taaagtgaggaattgatgatttattcatagtgggtgccaattttgttgtcgtgcctgataacatgatccgtgagaatactaagatttgtatgattcttat 45219612  T
Q  249 tatgtaattgattctt 264  Q
    ||||||||||||||||    
T  45219613 tatgtaattgattctt 45219628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 23275634 - 23275516
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattta 128  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||| |||||||| | |||    
T  23275634 gctgcgattttcatattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggattgaatta 23275535  T
Q  129 aggaagttggagaattagg 147  Q
      |||||||||||||||||    
T  23275534 gagaagttggagaattagg 23275516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 21838424 - 21838303
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaattagg 147  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||||||| | ||||||||| |||| |||||||| ||  |||||||||||||||    
T  21838424 aaggtaagggtgagactagcattcaattatattgagtctgtaattctgatgattaaatttaacaagtgtagaattaattttagagagttggagaattagg 21838325  T
Q  148 ttaaagcgaggaattgatgatt 169  Q
    |||||| |||||||||| ||||    
T  21838324 ttaaagtgaggaattgacgatt 21838303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 167
Target Start/End: Complemental strand, 43928079 - 43927937
Alignment:
Q  27 gaagctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaag-agtaggattaa 124  Q
    |||||||||||||  || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||  |||||||||     
T  43928079 gaagctgcgatttcgattttctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatggttgtatttaacaagttgtaggattag 43927980  T
Q  125 tttaaggaagttggagaattaggttaaagcgaggaattgatga 167  Q
    ||   |  | || |||||||||||||||| |||||||||||||    
T  43927979 ttattgagaatttgagaattaggttaaagtgaggaattgatga 43927937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 19039570 - 19039478
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta-ctttaacaagagtaggat 121  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||| |||||||    
T  19039570 gctgcgattttcttattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattagatttaacaagtgtaggat 19039478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 36167629 - 36167480
Alignment:
Q  19 agacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagta 117  Q
    |||| ||||||||||||||||| ||  |  |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| | ||||||||| ||     
T  36167629 agacctaggaagctgcgattttgattgtt-aaggtaagggtgagactaacattcaatcttattaagtctgtaatcctgatgattaaatttaacaagggtg 36167531  T
Q  118 ggattaatttaaggaag-ttggagaatta-ggttaaagcgaggaattgatga 167  Q
    ||||||||||  ||| | || |||||||| |||||||| |||||||||||||    
T  36167530 ggattaattt-tggaggatttgagaattagggttaaagtgaggaattgatga 36167480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 17738250 - 17738177
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  17738250 gctgcgattttcttattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgatta 17738177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 21619451 - 21619331
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaag-ttggagaatta- 145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||  |||||||||  ||| | || ||||||||     
T  21619451 aaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgagattaattt-tggaggatttgagaattag 21619353  T
Q  146 ggttaaagcgaggaattgatga 167  Q
    |||||||| |||||||||||||    
T  21619352 ggttaaagtgaggaattgatga 21619331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 8899697 - 8899638
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8899697 gagagacctaggaagctgcgatttttatattccaaggtaagggtgagactaacattcaat 8899638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 16282046 - 16282105
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16282046 gagagacctaggaagctgcgatttttatattccaaggtaagggtgagactaacattcaat 16282105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 38961125 - 38961184
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38961125 gagagacctaggaagctgcgatttttatattccaaggtaagggtgagactaacattcaat 38961184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 28195578 - 28195507
Alignment:
Q  52 gtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatt 122  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  28195578 gtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggatt 28195507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 41124813 - 41124754
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  41124813 gagagacctaggaagctgcgatttttatattccaaggtaagggtgggactaacattcaat 41124754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 13937270 - 13937321
Alignment:
Q  24 taggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  13937270 taggaagctgcgatttttatattccaaggtaagggtgggactaacattcaat 13937321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 13938268 - 13938327
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || || ||||||||    
T  13938268 gagagacctaggaagctgcgatttttatattccaaggtaagggtgggaataacattcaat 13938327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 53300797 - 53300879
Alignment:
Q  19 agacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt 102  Q
    |||| ||||||||||||||||| ||  |  |||||||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  53300797 agacctaggaagctgcgattttgattgtt-aaggtaagagtgagactagcattcaattctattaagtctgtaattctgatgatt 53300879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 10557778 - 10557724
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  10557778 aaggtaagggtgagaccagcattcaattctattaagtctgtaattctgatgatta 10557724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 10551374 - 10551298
Alignment:
Q  48 caaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatta 123  Q
    |||||||||||||||| || ||||||||||||||||||||||||||  ||||||| | ||||||||| || ||||||    
T  10551374 caaggtaagggtgagattaacattcaatcttattaagtctgtaatttcgatgattaaatttaacaagggtgggatta 10551298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 15471863 - 15471816
Alignment:
Q  28 aagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  15471863 aagctgcgattttcatattctaaggtaagggtgagactagcattcaat 15471816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 11202272 - 11202218
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||||||||||||||| |||||||| | |||||||| ||||    
T  11202272 aaggtaagggtgagactagcattcaatcttcttaagtctatgattctgataatta 11202218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 22109463 - 22109603
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgat-gattactttaacaagagtaggattaattt 127  Q
    |||||||||||| || ||| |||||||||||||||||| | | ||||  ||||||||||||||||||||| | |   ||| ||||| |||||||||||||    
T  22109463 agctgcgattttgat-ttctaaggtaagggtgagactaacttacaattatattaagtctgtaattctgatagttgtatttgacaagtgtaggattaattt 22109561  T
Q  128 aaggaagttggagaatta-ggttaaagcgaggaattgatgatt 169  Q
     | ||| || |||||||| |||||||| |||||||||| ||||    
T  22109562 gaagaaatt-gagaattagggttaaagagaggaattgaggatt 22109603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 23412357 - 23412422
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    ||||||||||| |  |||| |||||||||||||||||||||||||||  |||||| ||||||||||    
T  23412357 agctgcgatttcttcattctaaggtaagggtgagactagcattcaattctattaattctgtaattc 23412422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 17444066 - 17444110
Alignment:
Q  31 ctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||    
T  17444066 ctgcgatttttatattccaaggtaagggtgggactaacattcaat 17444110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 22792232 - 22792179
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaa 83  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||| |||||||    
T  22792232 agctgcgatttgt-tattctaaggtaagggtgagactagcattcaattttattaa 22792179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 24339922 - 24339967
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||    
T  24339922 gctgcgattttcttattctaaggtaagggtgagactagcattcaat 24339967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 45798132 - 45798087
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||    
T  45798132 aaggtaagggtgagactagcattcaattctattaattctgtaattc 45798087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 22146750 - 22146817
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctga 97  Q
    |||||||||||  ||||| |||||||||||| ||||| ||||||||||| ||||| || | |||||||    
T  22146750 gctgcgattttcttattctaaggtaagggtgggactaacattcaatcttcttaagcctatgattctga 22146817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 37250318 - 37250440
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagt-ctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaatta- 145  Q
    |||||||||||||||||| ||||||||  ||||||||  | ||||||||||| ||   ||||||||| ||| ||||||||||  ||||||||| |||||     
T  37250318 aaggtaagggtgagactaacattcaattctattaagtagtataattctgatggttgtatttaacaagtgtatgattaatttagagaagttgga-aattag 37250416  T
Q  146 ggttaaagcgaggaattgatgatt 169  Q
    |||||||| ||| |||||| ||||    
T  37250417 ggttaaagtgagaaattgaggatt 37250440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 325129 - 325075
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||||||||||||||| ||||| || | |||||||| ||||    
T  325129 aaggtaagggtgggactagcattcaatcttcttaagcctatgattctgataatta 325075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 9578596 - 9578542
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| || | |||||||||||||    
T  9578596 aaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgatta 9578542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 50243862 - 50243816
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattct 95  Q
    |||||||||||||||||| ||||||||||| ||||| |||| |||||    
T  50243862 aaggtaagggtgagactaacattcaatcttcttaagcctgtgattct 50243816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 14502117 - 14502072
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    |||||||||||||||||| ||||||||  |||||| ||||||||||    
T  14502117 aaggtaagggtgagactaacattcaattctattaattctgtaattc 14502072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 13522203 - 13522251
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctga 97  Q
    |||||||||||| ||||||||||||||||| ||||| || | |||||||    
T  13522203 aaggtaagggtgggactagcattcaatcttcttaagcctatgattctga 13522251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 49 - 264
Target Start/End: Original strand, 43629298 - 43629513
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaagttggagaattaggt 148  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  43629298 aaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaatttaataagagtaggattaatttaaggaagttggagaattaggt 43629397  T
Q  149 taaagcgaggaattgatgatttattcatagtgggtgccaattttgttgtcgtgcctgataacatgatccgtgagaataccaggatttgtatgattcttat 248  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43629398 taaagtgaggaattgatgatttattcatagtgggtgccaattttgttgtcgtgcctgataacatgatccgtgagaatactaggatttgtatgattcttat 43629497  T
Q  249 tatgtaattgattctt 264  Q
    ||||||||||||||||    
T  43629498 tatgtaattgattctt 43629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 12272538 - 12272418
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaagttggagaattaggt 148  Q
    |||||||| ||| |||||||||||||||||||||||| | |  |||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||||    
T  12272538 aaggtaagagtgcgactagcattcaatcttattaagttttttcttctgatgattaatttaacaagtgtaggattaatttagagaagttggagaattaggt 12272439  T
Q  149 taaagcgaggaattgatgatt 169  Q
    ||||| |||||||||||||||    
T  12272438 taaagtgaggaattgatgatt 12272418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 50687561 - 50687440
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaattagg 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||  ||| ||  | || ||||||||||    
T  50687561 aaggtaagagtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtgtaggattggttttagagaatttgagaattagg 50687462  T
Q  148 ttaaagcgaggaattgatgatt 169  Q
    |||||| ||| |||||||||||    
T  50687461 ttaaagggagaaattgatgatt 50687440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 169
Target Start/End: Original strand, 27652388 - 27652514
Alignment:
Q  44 attccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaa 142  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||| |||| |||| ||| ||  | ||||||||    
T  27652388 attctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtagaattagttttagagaattggagaa 27652487  T
Q  143 ttaggttaaagcgaggaattgatgatt 169  Q
    ||| ||||||| ||| |||||||||||    
T  27652488 ttaagttaaagtgagaaattgatgatt 27652514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 14294710 - 14294803
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatt 122  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  14294710 gctgcgattttcttattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggatt 14294803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 51131526 - 51131433
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatt 122  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  51131526 gctgcgattttcttattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggatt 51131433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 40129765 - 40129706
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40129765 gagagacctaggaagctgcgatttttatattccaaggtaagggtgagactaacattcaat 40129706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 21343042 - 21342968
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatt 122  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  21343042 aaggtaagggtgggactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggatt 21342968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 21347907 - 21347833
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatt 122  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  21347907 aaggtaagggtgggactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggatt 21347833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 41230914 - 41230967
Alignment:
Q  22 cttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  41230914 cttaggaagctgcgatttttatattccaaggtaagggtgggactaacattcaat 41230967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 22122143 - 22122194
Alignment:
Q  24 taggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  22122143 taggaagctgcgatttttatattccaaggtaagggtgggactaacattcaat 22122194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 15859318 - 15859372
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  15859318 aaggtaagggtgagactagcatttaattctattaagtctgtaattctgatgatta 15859372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 50613221 - 50613289
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgat 98  Q
    ||||||||||  || ||| |||||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  50613221 gctgcgatttcgattttctaaggtaagggtgagactaacattcaatcctattaagtctgtaattatgat 50613289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 50621049 - 50621117
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgat 98  Q
    ||||||||||  || ||| |||||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  50621049 gctgcgatttcgattttctaaggtaagggtgagactaacattcaatcctattaagtctgtaattatgat 50621117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 21683947 - 21683897
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatg 99  Q
    |||||||||||||||||| |||||||| || |||||||| |||||||||||    
T  21683947 aaggtaagggtgagactaacattcaattttcttaagtctataattctgatg 21683897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 31613421 - 31613363
Alignment:
Q  17 agagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||| ||| ||| |||||||||||||||||||||||| |||| ||||| ||||||||    
T  31613421 agagacctagcaagttgcgatttttatattccaaggtaatggtgggactaacattcaat 31613363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 52940028 - 52940082
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||| ||||||||| ||||||||||| ||||| || |||||||||||||||    
T  52940028 aaggtaagagtgagactaacattcaatcttcttaagcctttaattctgatgatta 52940082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 16382086 - 16382041
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||    
T  16382086 aaggtaagggtgggactagcattcaattctattaagtctgtaattc 16382041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 21473864 - 21473819
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||    
T  21473864 gctgcgattttcttattctaaggtaagggtgagactagcattcaat 21473819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 41049173 - 41049295
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaatta- 145  Q
    |||||||||||||||||||||||||||  ||||||| | | ||||| ||||| ||   || |||||| |||||||||||||   ||||||||| |||||     
T  41049173 aaggtaagggtgagactagcattcaattctattaagttgtataattatgatggttgtattcaacaagtgtaggattaatttggagaagttgga-aattag 41049271  T
Q  146 ggttaaagcgaggaattgatgatt 169  Q
    |||||||| ||| |||||||||||    
T  41049272 ggttaaagtgagaaattgatgatt 41049295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 13880539 - 13880593
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| |||| |||||||| ||||    
T  13880539 aaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataatta 13880593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 20959080 - 20959026
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| || | |||||||||||||    
T  20959080 aaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgatta 20959026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 48521462 - 48521408
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| |||| |||||||| ||||    
T  48521462 aaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataatta 48521408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 16093024 - 16093141
Alignment:
Q  51 ggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaatta-ggt 148  Q
    |||||||||||||||| |||||||| ||||||||||| | ||||  || ||| | |||||| || |||||||| |||| ||  | || |||||||| |||    
T  16093024 ggtaagggtgagactaacattcaattttattaagtctatgattcatataattaaatttaaccagtgtaggattgattttagagaatttgagaattagggt 16093123  T
Q  149 taaagcgaggaattgatg 166  Q
    ||||| ||| ||||||||    
T  16093124 taaagtgagaaattgatg 16093141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 169
Target Start/End: Complemental strand, 26065832 - 26065768
Alignment:
Q  105 tttaacaagagtaggattaatttaaggaagttggagaattagg-ttaaagcgaggaattgatgatt 169  Q
    ||||||||| ||||||||||||||  ||||||||| ||||||| |||||| ||| |||||||||||    
T  26065832 tttaacaagtgtaggattaatttagagaagttgga-aattagggttaaagtgagaaattgatgatt 26065768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 20919538 - 20919502
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagacta 66  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  20919538 gctgcgattttcatattctaaggtaagggtgagacta 20919502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 22129998 - 22130075
Alignment:
Q  19 agacttaggaagctgcgatttttat-attccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctga 97  Q
    |||| ||||||||||||||||| || |||  |||||||||||| ||||| ||||||||||| ||||| || | |||||||    
T  22129998 agacctaggaagctgcgattttgattatt--aaggtaagggtgggactaacattcaatcttcttaagcctatgattctga 22130075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 26065912 - 26065876
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagt 85  Q
    |||||||||||||||||||||||||||  ||||||||    
T  26065912 aaggtaagggtgagactagcattcaattctattaagt 26065876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 4e-50; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 14102353 - 14102473
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaagttggagaattaggt 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||||    
T  14102353 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaatttaacaagtgtaggattaatttagcgaagttggagaattaggt 14102452  T
Q  149 taaagcgaggaattgatgatt 169  Q
    ||||| |||||||||||||||    
T  14102453 taaagtgaggaattgatgatt 14102473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 13507214 - 13507355
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattta 128  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||  ||||||| | |||    
T  13507214 gctgcgattttcatattctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtataggattgaatta 13507313  T
Q  129 aggaagttggagaatta-ggttaaagcgaggaattgatgatt 169  Q
      ||||||||||||||| |||||||| ||| |||||| ||||    
T  13507314 gagaagttggagaattagggttaaagtgagaaattgaggatt 13507355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 13596746 - 13596887
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattta 128  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||  ||||||| | |||    
T  13596746 gctgcgattttcatattctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtataggattgaatta 13596845  T
Q  129 aggaagttggagaatta-ggttaaagcgaggaattgatgatt 169  Q
      ||||||||||||||| |||||||| ||| |||||| ||||    
T  13596846 gagaagttggagaattagggttaaagtgagaaattgaggatt 13596887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 22365627 - 22365484
Alignment:
Q  27 gaagctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaat 125  Q
    ||||||| |||||  || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| ||    
T  22365627 gaagctgggatttcgattttctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtgtaggattgat 22365528  T
Q  126 ttaaggaagttggagaattaggttaaagcgaggaattgatgatt 169  Q
    || ||  | || |||||||| ||||||| ||| ||||| |||||    
T  22365527 tttagagaatttgagaattaagttaaagtgagaaattggtgatt 22365484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 24354033 - 24353894
Alignment:
Q  31 ctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaa 129  Q
    |||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| | ||| ||| |    
T  24354033 ctgcgattttgattttctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtgtatggttagtttta 24353934  T
Q  130 ggaagttggagaattaggttaaagcgaggaattgatgatt 169  Q
    |  | || |||||||||||||| | ||| |||||||||||    
T  24353933 gagaatttgagaattaggttaaggtgagaaattgatgatt 24353894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 40492029 - 40492108
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||| |||||||||||||    
T  40492029 aaggtaagggtgagactagcattcaatcttattaagtctgtaattttgatgattaaatttaacaagtgtaggattaattt 40492108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 173
Target Start/End: Original strand, 17266126 - 17266270
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattta 128  Q
    ||||||||||  || ||| |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||   ||||||||| ||||||||  ||||    
T  17266126 gctgcgatttcgattttctaaggtaagggtgagactaacattcaatcttattaaatctgtaattctgatggttgtatttaacaagtgtaggattgtttta 17266225  T
Q  129 aggaagttggagaatta-ggttaaagcgaggaattgatgatttatt 173  Q
      ||||||||| ||||| |||||||| ||| |||||||||||||||    
T  17266226 gagaagttgga-aattagggttaaagtgagaaattgatgatttatt 17266270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 19936212 - 19936295
Alignment:
Q  19 agacttaggaagctgcgatttttat-attccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  19936212 agacctaggaagctgcgatttttattatt--aaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgatta 19936295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 26222332 - 26222452
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaag-ttggagaatta- 145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| || |||||| |||  ||| | || ||||||||     
T  26222332 aaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttt-tggaggatttgagaattag 26222430  T
Q  146 ggttaaagcgaggaattgatga 167  Q
    |||||||| |||||||||||||    
T  26222431 ggttaaagtgaggaattgatga 26222452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 26220621 - 26220546
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatta 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||    
T  26220621 aaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggatta 26220546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 20404153 - 20404094
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  20404153 gagagacctaggaagctgcgatttttatattccaaggtaagggtgggactaacattcaat 20404094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 39834558 - 39834506
Alignment:
Q  117 aggattaatttaaggaagttggagaattaggttaaagcgaggaattgatgatt 169  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  39834558 aggattactttaaggaagttggagaattaggttaaagtgaggaattgatgatt 39834506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 39834604 - 39834559
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  39834604 aaggtaagggtgagactaacattcaatcttattaagtctgtaattc 39834559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 32810568 - 32810509
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| || ||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  32810568 gagagacctatgaagctgcgatttttatattctaaggtaagggtgggactaacattcaat 32810509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 5609825 - 5609878
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaa 83  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||| |||||||    
T  5609825 agctgcgatttgt-tattctaaggtaagggtgagactagcattcaattttattaa 5609878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 22966924 - 22966830
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaa-gtctgtaattctgatga-ttactttaacaagagtaggatt 122  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||  ||||||  | | |||||||||||| ||  ||||||||| ||||||||    
T  22966924 gctgcgattttcttattctaaggtaagggtgagactagcattcaattctattaatctatataattctgatgattttatttaacaagtgtaggatt 22966830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 147
Target Start/End: Complemental strand, 20499561 - 20499456
Alignment:
Q  44 attccaaggtaagggtgagactagcattcaatcttattaa-gtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggaga 141  Q
    |||| |||||||||||||||||||||||||||  ||||||  | | ||||||||||||||   |||| |||| |||||||| | |||  |||||||||||    
T  20499561 attctaaggtaagggtgagactagcattcaattctattaatctatataattctgatgattgtatttagcaagtgtaggattgaattagagaagttggaga 20499462  T
Q  142 attagg 147  Q
    ||||||    
T  20499461 attagg 20499456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 22984612 - 22984559
Alignment:
Q  50 aggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    ||||||||||||||||| ||||||||||| ||||| || | |||||||||||||    
T  22984612 aggtaagggtgagactaacattcaatcttcttaagcctttgattctgatgatta 22984559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 17438665 - 17438787
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgat--tactttaacaag-agtaggattaatttaaggaagttggagaatta 145  Q
    ||||||||| |||||||||||||||||  |||||||||| | ||||||||| |  || |||||||||  ||||||||| |||  |  | || ||||||||    
T  17438665 aaggtaaggttgagactagcattcaattctattaagtctatgattctgatggtcgta-tttaacaagttgtaggattagtttgtgagaatttgagaatta 17438763  T
Q  146 ggttaaagcgaggaattgatgatt 169  Q
    |||||||| ||| |||||||||||    
T  17438764 ggttaaagtgagaaattgatgatt 17438787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 2418004 - 2418078
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta-ctttaacaagagtaggatta 123  Q
    ||||||||||||||||||||||||||| || ||| |  |||||||||||||||||  ||||| ||| |||||||||    
T  2418004 aaggtaagggtgagactagcattcaattttcttatg-atgtaattctgatgattagatttaaaaagtgtaggatta 2418078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 20501231 - 20501285
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| || | |||||||||||||    
T  20501231 aaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgatta 20501285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 22996762 - 22996708
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| ||||||||||| ||||| || | ||| |||||||||    
T  22996762 aaggtaagggtgagactaacattcaatcttcttaagcctatgattttgatgatta 22996708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 28398539 - 28398485
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| |||||||| || ||||| || | |||||||||||||    
T  28398539 aaggtaagggtgagactaacattcaattttcttaagcctatgattctgatgatta 28398485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 7464905 - 7465005
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaa-gtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaattag 146  Q
    |||||||||||||||||| |||||||| |||||||  | | ||||||||||||||   |||| |||| |||||||| | |||  ||||||||| ||||||    
T  7464905 aaggtaagggtgagactaacattcaattttattaacctatataattctgatgattgtatttagcaagtgtaggattgaattagagaagttggaaaattag 7465004  T
Q  147 g 147  Q
    |    
T  7465005 g 7465005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 19800612 - 19800675
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    ||||||||||||  |||| |||||||||||||||||| ||||||||  |||||| || |||||||    
T  19800612 gctgcgatttttg-attctaaggtaagggtgagactaacattcaattctattaattccgtaattc 19800675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 38854425 - 38854480
Alignment:
Q  19 agacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||| ||| ||||||||||||| || | | |||||||||||||||||||||||||||    
T  38854425 agacctagaaagctgcgattttcat-tgctaaggtaagggtgagactagcattcaat 38854480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 15113912 - 15113792
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaagttggagaattaggt 148  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||    
T  15113912 aaggtaagggtgagactagcattcaatcttattaagtctgtacttctgatgattaatttaacaagtgtatgattaatttaaagaagttggagaattaggt 15113813  T
Q  149 taaagcgaggaattgatgatt 169  Q
    ||||| |||||||||||||||    
T  15113812 taaagtgaggaattgatgatt 15113792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 16324920 - 16324800
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaagttggagaattaggt 148  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||||    
T  16324920 aaggtaagggtgagactagcattcaatcttattaagtctgtacttctgatgattaatttaacaagtgtaggattaatttagagaagttggagaattaggt 16324821  T
Q  149 taaagcgaggaattgatgatt 169  Q
    ||||| |||||||||||||||    
T  16324820 taaagtgaggaattgatgatt 16324800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 15117438 - 15117318
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaagttggagaattaggt 148  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||||    
T  15117438 aaggtaagggtgagactagcattcaatcttattaagtctgtacttctgatgattaatttaacaagtgtaggattaatttagagaagttggagaattaggt 15117339  T
Q  149 taaagcgaggaattgatgatt 169  Q
    ||||| |||||||| ||||||    
T  15117338 taaagtgaggaatttatgatt 15117318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 14037168 - 14037047
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaattagg 147  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||| ||   ||||||||| ||||||||| ||| || ||  ||||||||||||    
T  14037168 aaggtaagggtgagactagcattcaattctattaagtctgtaattctgatggttgtatttaacaagtgtaggattagttttagaaaaatggagaattagg 14037069  T
Q  148 ttaaagcgaggaattgatgatt 169  Q
    |||||| |||||||||||||||    
T  14037068 ttaaagtgaggaattgatgatt 14037047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 14347198 - 14347077
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaattagg 147  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||| ||   ||||||||| ||||||||| ||| || ||  ||||||||||||    
T  14347198 aaggtaagggtgagactagcattcaattctattaagtctgtaattctgatggttgtatttaacaagtgtaggattagttttagaaaaatggagaattagg 14347099  T
Q  148 ttaaagcgaggaattgatgatt 169  Q
    |||||| |||||||||||||||    
T  14347098 ttaaagtgaggaattgatgatt 14347077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 14045740 - 14045619
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt--actttaacaagagtaggattaatttaaggaagttggagaattag 146  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||||||| ||  |||| |||||| ||||||||| ||| || || ||||||||||||    
T  14045740 aaggtaaaggtgagactagcattcaattctattaagtctgtaattctgatggttgtactt-aacaagtgtaggattagttttagaaaattggagaattag 14045642  T
Q  147 gttaaagcgaggaattgatgatt 169  Q
    ||||||| |||||||||||||||    
T  14045641 gttaaagtgaggaattgatgatt 14045619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 14355770 - 14355649
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt--actttaacaagagtaggattaatttaaggaagttggagaattag 146  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||||||| ||  |||| |||||| ||||||||| ||| || || ||||||||||||    
T  14355770 aaggtaaaggtgagactagcattcaattctattaagtctgtaattctgatggttgtactt-aacaagtgtaggattagttttagaaaattggagaattag 14355672  T
Q  147 gttaaagcgaggaattgatgatt 169  Q
    ||||||| |||||||||||||||    
T  14355671 gttaaagtgaggaattgatgatt 14355649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 10062865 - 10063004
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattta 128  Q
    |||||||||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| || |||||| |||     
T  10062865 gctgcgattttcttattctaaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttt- 10062963  T
Q  129 aggaag-ttggagaatta-ggttaaagcgaggaattgatga 167  Q
     ||| | || |||||||| |||||||| |||||||||||||    
T  10062964 tggaggatttgagaattagggttaaagtgaggaattgatga 10063004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 1867234 - 1867355
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgat-gattactttaacaagagtaggattaatttaaggaagttggagaattagg 147  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||||| | |   ||||||||| ||||||||| ||| ||  | ||||||||| |||    
T  1867234 aaggtaaggacgagactaacattcaatcttattaagtctgtaattctgatagttgtatttaacaagtgtaggattagttttagacaattggagaatcagg 1867333  T
Q  148 ttaaagcgaggaattgatgatt 169  Q
    |||||| |||||||||||||||    
T  1867334 ttaaagtgaggaattgatgatt 1867355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 16496363 - 16496270
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatt 122  Q
    |||||||||||  ||||| ||| |||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  16496363 gctgcgattttcttattctaagataagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggatt 16496270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 9176836 - 9176911
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatta 123  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | ||||||||| |||||||||    
T  9176836 aaggtaagggtgagactagcattcaattttattaagtctgtaattctgataattaaatttaacaagtgtaggatta 9176911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 48274552 - 48274432
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaag-ttggagaatta- 145  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||| | ||||||||| || |||||| |||  ||| | || ||||||||     
T  48274552 aaggtaagggtgagactaacattcaatcttatcaagtctgtaattctgatgattaaatttaacaagggtgggattagttt-tggaggatttgagaattag 48274454  T
Q  146 ggttaaagcgaggaattgatga 167  Q
    |||||||| |||||||||||||    
T  48274453 ggttaaagtgaggaattgatga 48274432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 3387517 - 3387442
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatta 123  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||| || ||||||    
T  3387517 aaggtaagggtgagactaacattcaatcttattaagtccgtaattctgatgattaaatttaacaagggtgggatta 3387442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 21188893 - 21188948
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcatt 71  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  21188893 gagagacctaggaagctgcgatttttatattccaaggtaagggtgggactaacatt 21188948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 17180530 - 17180571
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgta 90  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17180530 aaggtaagggtgagactagcattcaatcttattaagtctgta 17180571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 11973221 - 11973170
Alignment:
Q  24 taggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  11973221 taggaagctgcaatttttatattccaaggtaagggtgggactaacattcaat 11973170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 15007650 - 15007772
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaatta- 145  Q
    |||||||||||||||||||||||||||  ||||||| | | ||||||||||| ||   ||||||||| ||||||||||||||  ||||||||| |||||     
T  15007650 aaggtaagggtgagactagcattcaattctattaagttgtataattctgatggttgtatttaacaagtgtaggattaatttagagaagttgga-aattag 15007748  T
Q  146 ggttaaagcgaggaattgatgatt 169  Q
    |||||||| ||| |||||| ||||    
T  15007749 ggttaaagtgagaaattgaggatt 15007772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 11768091 - 11768194
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta-ctttaacaagagtaggattaatttaaggaagttggagaattagg 147  Q
    |||||||||||| ||||| ||||||||||| ||||| || |||||||||||||||  ||||||| | ||||| ||| |||  | |||||||| |||||||    
T  11768091 aaggtaagggtgggactaacattcaatcttcttaagcctataattctgatgattagatttaacatgtgtaggtttagtttttgaaagttgga-aattagg 11768189  T
Q  148 ttaaa 152  Q
    |||||    
T  11768190 ttaaa 11768194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 16092439 - 16092396
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaat 92  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||    
T  16092439 aaggtaagggtgagactagtattcattcttattaagtctgtaat 16092396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 1856382 - 1856450
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctga 97  Q
    |||||||||||| | |||| |||||||||||| ||||| ||||||||||| ||||| || | |||||||    
T  1856382 agctgcgattttcacattctaaggtaagggtgggactaacattcaatcttcttaagcctatgattctga 1856450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 13917554 - 13917622
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctga 97  Q
    |||||||||||| | |||| |||||||||||| ||||| ||||||||||| ||||| || | |||||||    
T  13917554 agctgcgattttcacattctaaggtaagggtgggactaacattcaatcttcttaagcctatgattctga 13917622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 68664 - 68597
Alignment:
Q  28 aagctgcgatttttatattccaaggtaagggtgagactagcatt-caatcttattaagtctgtaattc 94  Q
    ||||||||||||| | |||| |||||||||||||||||| | || |||| ||||||||||||| ||||    
T  68664 aagctgcgattttcacattctaaggtaagggtgagactaactttgcaattttattaagtctgtgattc 68597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 15440248 - 15440214
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaa 83  Q
    ||||||||||||||||||||||||||| |||||||    
T  15440248 aaggtaagggtgagactagcattcaattttattaa 15440214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 16997143 - 16997089
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| || | |||||||||||||    
T  16997143 aaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgatta 16997089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 37793393 - 37793447
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| |  |||||||||||||||    
T  37793393 aaggtaagggtgggactaacattcaatcttcttaagccgttaattctgatgatta 37793447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 42462922 - 42462868
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| || | |||||||||||||    
T  42462922 aaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgatta 42462868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 47832745 - 47832692
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaa 83  Q
    |||||||||||| | |||| |||||||||||||||||| |||||||| |||||||    
T  47832745 agctgcgattttga-attctaaggtaagggtgagactaacattcaattttattaa 47832692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 18304699 - 18304654
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    |||||||||||||||||||||| ||||  |||||| ||||||||||    
T  18304699 aaggtaagggtgagactagcatacaattctattaattctgtaattc 18304654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 62332 - 62452
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaagttggagaattaggt 148  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||  ||||||||||||||||||    
T  62332 aaggtaagggtgagactagcattcaatcttaataagtctgtaattctgatgattaatttaacaaatgtaggattaatttagagaagttggagaattaggt 62431  T
Q  149 taaagcgaggaattgatgatt 169  Q
    ||||| |||||||||||||||    
T  62432 taaagtgaggaattgatgatt 62452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 58784 - 58735
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgat 98  Q
    |||||||||||||||||| |||||||| ||||||||||| | ||||||||    
T  58784 aaggtaagggtgagactaacattcaattttattaagtctatgattctgat 58735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 86509 - 86389
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaagttggagaattaggt 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||  ||||||||||||||||||    
T  86509 aaggtaagggtgagactagcattcaatcctattaagtctgtaattctgatgattaatttaacaagtgtaggattaatttagagaagttggagaattaggt 86410  T
Q  149 taaagcgaggaattgatgatt 169  Q
    ||||  |||||||||||||||    
T  86409 taaattgaggaattgatgatt 86389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 165
Target Start/End: Original strand, 22458691 - 22458807
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaagttggagaattaggt 148  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| || |||||||| ||  ||||||||||||||| ||    
T  22458691 aaggtaagggtgagactagcattcaattttattaagtctgtaattctgatgattaatttaacaagtgtgggattaatctatagaagttggagaattatgt 22458790  T
Q  149 taaagcgaggaattgat 165  Q
    ||||| |||||||||||    
T  22458791 taaagtgaggaattgat 22458807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 23792245 - 23792124
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaatta-g 146  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| ||||||||||  ||||||||| ||||| |    
T  23792245 aaggtaagggtgagcctagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtgtatgattaatttagagaagttgga-aattagg 23792147  T
Q  147 gttaaagcgaggaattgatgatt 169  Q
    ||||||| ||| |||||||||||    
T  23792146 gttaaagtgagaaattgatgatt 23792124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 19672837 - 19672697
Alignment:
Q  31 ctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaa 129  Q
    |||||||||| | |||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||| ||| |||| | |||     
T  19672837 ctgcgattttcacattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtatgattgaattag 19672738  T
Q  130 ggaagttggagaattagg-ttaaagcgaggaattgatgatt 169  Q
     ||||||||||||||||| |||||| ||| |||||| ||||    
T  19672737 agaagttggagaattaggtttaaagtgagaaattgaggatt 19672697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 25109839 - 25109718
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaattagg 147  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||| |||| |||| ||| ||  | |||||||||||||    
T  25109839 aaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtagaattagttttagagaattggagaattagg 25109740  T
Q  148 ttaaagcgaggaattgatgatt 169  Q
    | |||| ||| |||||||||||    
T  25109739 taaaagtgagaaattgatgatt 25109718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 23005740 - 23005600
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattta 128  Q
    ||||||||||  || ||| |||||||||||||||||||||||||||  |||||||||||||||| |||||||| | ||||| ||| ||||||||| |||     
T  23005740 gctgcgatttcgattttctaaggtaagggtgagactagcattcaattctattaagtctgtaattttgatgattaaatttaagaagtgtaggattagtttt 23005641  T
Q  129 aggaagttggagaattaggttaaagcgaggaattgatgatt 169  Q
    ||  | || |||||||||||||||| ||| |||||||||||    
T  23005640 agagaatttgagaattaggttaaagggagaaattgatgatt 23005600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 43138346 - 43138207
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattt- 127  Q
    |||||||||||  ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| | ||||||||| || |||||| |||     
T  43138346 gctgcgattttcttattctaaggtaagggtgagactaacattcaatcttattaggtctgtaattctgatgattaaatttaacaagggtgggattagtttt 43138247  T
Q  128 -aaggaagttggagaatta-ggttaaagcgaggaattgatga 167  Q
     |||||  || || ||||| |||||||| |||||||||||||    
T  43138246 gaagga--tttgataattagggttaaagtgaggaattgatga 43138207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 41523168 - 41523228
Alignment:
Q  15 ggagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  41523168 ggagagacctaggaagctgcgatttttatattccaaggtaagggtgaggctaacattcaat 41523228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 6726921 - 6726862
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  6726921 gagagacctaggaagctgcgatttttatattccaaggtaagggtgggactaacattcaat 6726862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 24941651 - 24941576
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatta 123  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||    
T  24941651 aaggtaagggtgagacaaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggatta 24941576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 25616661 - 25616602
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  25616661 gagagacctaggaagctgcgatttttatattccaaggtaagggtgggactaacattcaat 25616602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 24368701 - 24368642
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  24368701 gagagacctaggaagctgcgaattttatattccaaggtaagggtgggactaacattcaat 24368642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 26393373 - 26393319
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  26393373 aaggtaagggtgagactaacattcaattctcttaagtctgtaattctgatgatta 26393319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 27845608 - 27845554
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| |||||||| || |||||||| |||||||||||||||    
T  27845608 aaggtaagggtgagactaacattcaattttcttaagtctataattctgatgatta 27845554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 20519322 - 20519444
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgat--tactttaacaagagtaggattaatttaaggaagttggagaatta 145  Q
    |||||||||||||||||||||||||||  ||||||| | | ||||||||||| |  || | ||||||| ||||||||||||||  ||||||||| |||||    
T  20519322 aaggtaagggtgagactagcattcaattctattaagttgtataattctgatggtggta-tctaacaagtgtaggattaatttagagaagttgga-aatta 20519419  T
Q  146 -ggttaaagcgaggaattgatgatt 169  Q
     |||||||| ||| |||||||||||    
T  20519420 gggttaaagtgagaaattgatgatt 20519444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 137
Target Start/End: Complemental strand, 23208268 - 23208179
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttg 137  Q
    |||||||||||||||||||||||||||  |||| ||||||||||| ||||| ||   | ||||||| ||||||||||||||  |||||||    
T  23208268 aaggtaagggtgagactagcattcaattctattcagtctgtaattttgatggttgtatctaacaagtgtaggattaatttagagaagttg 23208179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 21154106 - 21154162
Alignment:
Q  19 agacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||| |||||||||||||||||||||| |||||||||| ||| ||||| ||||||||    
T  21154106 agacctaggaagctgcgatttttatatcccaaggtaagagtgggactaacattcaat 21154162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 18546144 - 18546198
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| | |||||| || |||||||| |||||||||||||||    
T  18546144 aaggtaagggtgagactaacgttcaattttcttaagtctataattctgatgatta 18546198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 298026 - 298085
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgt 89  Q
    ||||||||||| |||||| |||||||||||||||||| | | ||||  ||||||||||||    
T  298026 gctgcgattttcatattctaaggtaagggtgagactaacttgcaattctattaagtctgt 298085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 18785992 - 18786062
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaa-gtctgtaattctgatg 99  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||||  ||||||  | |||||||||||||    
T  18785992 agctgcgattttt-tattcttaggtaagggtgagactagcattcaattctattaatctatgtaattctgatg 18786062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 7187475 - 7187421
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| ||||||||||| ||||| || | |||||||| ||||    
T  7187475 aaggtaagggtgagactaacattcaatcttcttaagcctatgattctgataatta 7187421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 23705463 - 23705508
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||||||||  |||| |||||||||||||||||||||||||||    
T  23705463 agctgcgatttttg-attctaaggtaagggtgagactagcattcaat 23705508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 23286788 - 23286752
Alignment:
Q  28 aagctgcgatttttatattccaaggtaagggtgagac 64  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  23286788 aagctgcgattttcatattctaaggtaagggtgagac 23286752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 22177348 - 22177469
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaattagg 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||  ||||||||| |||||||    
T  22177348 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtgtaggattaatttagagaagttgga-aattagg 22177446  T
Q  148 -ttaaagcgaggaattgatgatt 169  Q
     |||||| ||| |||||||||||    
T  22177447 tttaaagtgagaaattgatgatt 22177469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 18318185 - 18318305
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaag-ttggagaatta- 145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| || |||||| |||  ||| | || ||||||||     
T  18318185 aaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttt-tggaggatttgagaattag 18318283  T
Q  146 ggttaaagcgaggaattgatga 167  Q
    |||||||| |||||||||||||    
T  18318284 ggttaaagtgaggaattgatga 18318305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 36315500 - 36315421
Alignment:
Q  44 attccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatt 122  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  36315500 attctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggatt 36315421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 27988106 - 27988227
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaatta-g 146  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||| || | ||||||||| ||||||||||||||  ||||| ||| ||||| |    
T  27988106 aaggtaagggtgagactaacattcaattctattaagtctgtaattctgatggttaaatttaacaagtgtaggattaatttagagaagtggga-aattagg 27988204  T
Q  147 gttaaagcgaggaattgatgatt 169  Q
    ||||||| |  ||||||||||||    
T  27988205 gttaaagtgtagaattgatgatt 27988227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 20765231 - 20765306
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatta 123  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||| | ||||||||| || ||||||    
T  20765231 aaggtaagggtgagactaaaattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggatta 20765306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 20917135 - 20917194
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  20917135 gagagacctaggaagctgcgatttttatattccaaggtaagggtgggactaacattcaat 20917194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 32028899 - 32028840
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  32028899 gagagacctaggaagctgcgatttttatattccaaggtaaggatgagactaacattcaat 32028840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 26739777 - 26739852
Alignment:
Q  28 aagctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    ||||||||||||| || |   |||||||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  26739777 aagctgcgattttgatttgttaaggtaagggtgagactaacattcaattctcttaagtctgtaattctgatgatta 26739852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 22075897 - 22075858
Alignment:
Q  27 gaagctgcgatttttatattccaaggtaagggtgagacta 66  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  22075897 gaagctgcgattttaatattccaaggtaagggtgagacta 22075858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 21327424 - 21327478
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||| ||||||||| |||||||| || |||||||| |||||||||||||||    
T  21327424 aaggtaagagtgagactaacattcaattttcttaagtctataattctgatgatta 21327478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 22144986 - 22144941
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  22144986 agctgcgattttt-tattctaaggtaagggtgagactagcattcaat 22144941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 26731989 - 26732039
Alignment:
Q  53 taagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||||||||    
T  26731989 taagggtgagactaacattcaattctcttaagtctgtaattctgatgatta 26732039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 21870784 - 21870848
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    ||||||||||| ||  | ||||||||||||||||||||||||||||  || ||| ||||||||||    
T  21870784 gctgcgattttcatcatacaaggtaagggtgagactagcattcaattctactaattctgtaattc 21870848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 21875064 - 21875128
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    ||||||||||| ||  | ||||||||||||||||||||||||||||  || ||| ||||||||||    
T  21875064 gctgcgattttcatcatacaaggtaagggtgagactagcattcaattctactaattctgtaattc 21875128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 5888372 - 5888417
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||||||||  |||| |||||||||||||||||||||||||||    
T  5888372 agctgcgatttttg-attctaaggtaagggtgagactagcattcaat 5888417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 8286057 - 8286095
Alignment:
Q  28 aagctgcgatttttatattccaaggtaagggtgagacta 66  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  8286057 aagctgcgattttcatattctaaggtaagggtgagacta 8286095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 1097415 - 1097339
Alignment:
Q  19 agacttaggaagctgcgatttttatattccaaggtaagggtgagactagcatt-caatcttattaagtctgtaattc 94  Q
    |||| ||| ||||||||||||| | |||| |||||||||||||||||| | || ||||  |||||||||||| ||||    
T  1097415 agacctagaaagctgcgattttcacattctaaggtaagggtgagactaactttgcaattatattaagtctgtgattc 1097339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 24068324 - 24068244
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaa-gtctgtaattctgatga-ttactttaacaagagtaggattaattt 127  Q
    |||||||||||||||||||||||||||  ||||||  | | |||||||||||| ||  ||||||||| |||||||| ||||    
T  24068324 aaggtaagggtgagactagcattcaattctattaatctatataattctgatgattttatttaacaagtgtaggattgattt 24068244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 53081285 - 53081425
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattta 128  Q
    ||||||||||  || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| ||||||||||    
T  53081285 gctgcgatttcgattttctaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattaaatttaacaagtgtatgattaattta 53081384  T
Q  129 aggaagttggagaatta-ggttaaagcgaggaattgatgatt 169  Q
      ||||||||| ||||| |||||||| ||| |||||||||||    
T  53081385 gagaagttgga-aattagggttaaagtgagaaattgatgatt 53081425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 51462998 - 51463066
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaag 84  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  51462998 gagagacctaggaagctgcgatttttatattccaaggtaagggtgagactaacattcaatcttcttaag 51463066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 54797887 - 54798007
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaag-ttggagaatta- 145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| || |||||| |||  ||| | || ||||||||     
T  54797887 aaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttt-tggaggatttgagaattag 54797985  T
Q  146 ggttaaagcgaggaattgatga 167  Q
    |||||||| |||||||||||||    
T  54797986 ggttaaagtgaggaattgatga 54798007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 52313620 - 52313547
Alignment:
Q  24 taggaagctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctga 97  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||  | |||||||| | |||||||    
T  52313620 taggaagctgcgatttttatattccaaggtaagggtgggactaacattcaataatcttaagtctatgattctga 52313547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 14281317 - 14281265
Alignment:
Q  51 ggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  14281317 ggtaagggtgagactaacattcaatcttattaagtatgtaattctgatgatta 14281265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 11736 - 11795
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| || ||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  11736 gagagacctatgaagctgcgatttttatattccaagataagggtgggactaacattcaat 11795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 43197821 - 43197867
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||    
T  43197821 agctgcgattttcatattctaaggtaagggtgagactagcattcaat 43197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 23373711 - 23373753
Alignment:
Q  24 taggaagctgcgatttttatattccaaggtaagggtgagacta 66  Q
    |||||||||||||||||||||||| ||| ||||||||||||||    
T  23373711 taggaagctgcgatttttatattctaagataagggtgagacta 23373753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 32852369 - 32852324
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||    
T  32852369 aaggtaagggtgagactagcattcaattctattaattctgtaattc 32852324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 11024 - 11124
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaa-gtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaattag 146  Q
    |||||||||||||||||||||||||||  ||||||  | | ||||||||||||||   |||| |||| |||||||| | |||  ||||||||||||||||    
T  11024 aaggtaagggtgagactagcattcaattgtattaatctatataattctgatgattgtatttagcaagtgtaggattgaattacagaagttggagaattag 11123  T
Q  147 g 147  Q
    |    
T  11124 g 11124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 12611960 - 12611906
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| ||||||||||| ||||| || | |||||||| ||||    
T  12611960 aaggtaagggtgagactaacattcaatcttcttaagcctatgattctgataatta 12611906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 12903684 - 12903646
Alignment:
Q  28 aagctgcgatttttatattccaaggtaagggtgagacta 66  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  12903684 aagctgcgattttcatattctaaggtaagggtgagacta 12903646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 14852025 - 14852079
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||  ||||| ||||||||||| ||||| || |||||||||||||||    
T  14852025 aaggtaagggttggactaacattcaatcttcttaagcctttaattctgatgatta 14852079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 23802407 - 23802461
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| ||||||||||| ||||| || | |||||||| ||||    
T  23802407 aaggtaagggtgagactaacattcaatcttcttaagcctatgattctgataatta 23802461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 26790306 - 26790252
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| |||||||| || |||||||| | ||| |||||||||    
T  26790306 aaggtaagggtgagactaacattcaattttcttaagtctatgattttgatgatta 26790252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 15372112 - 15372067
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||||||  ||||| |||||||||||||||| ||||||||||    
T  15372112 gctgcgattttcttattctaaggtaagggtgagaccagcattcaat 15372067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 15374404 - 15374359
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||||||  ||||| |||||||||||||||| ||||||||||    
T  15374404 gctgcgattttcttattctaaggtaagggtgagaccagcattcaat 15374359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 52242419 - 52242542
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgta--attctgatgatta-ctttaacaagagtaggattaatttaaggaagttggagaatta 145  Q
    |||||||||||||||||||||||||||  |||||| ||||||  ||||||||| |||   |||||||| ||| |||| | |||  ||||||||| |||||    
T  52242419 aaggtaagggtgagactagcattcaattctattaa-tctgtatgattctgatggttataattaacaagtgtatgattgaattagagaagttggaaaatta 52242517  T
Q  146 -ggttaaagcgaggaattgatgatt 169  Q
     |||||||| ||| |||||| ||||    
T  52242518 gggttaaagagagaaattgaggatt 52242542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 1509 - 1369
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattt 127  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||| |||    
T  1509 agctgcgatttctat-ttctaaggtaagggtgagactagcattcaatcttattaagtctataattctgatgattgaatttaacaagtgtaggattagttt 1411  T
Q  128 aaggaagttggagaatta-ggttaaagcgaggaattgatgatt 169  Q
    |  ||||||||| ||||| |||||||| ||| |||||||||||    
T  1410 agagaagttgga-aattagggttaaagtgagaaattgatgatt 1369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 26068 - 25928
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattta 128  Q
    ||||||||||  || ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||| ||||||||  |||     
T  26068 gctgcgatttcgattttctaaggtaagggtgagactagcattcaatcttattaagcctgtaattctgatgattaaatttaacaagtgtaggattggtttt 25969  T
Q  129 aggaagttggagaattaggttaaagcgaggaattgatgatt 169  Q
    ||  | || |||||||||||||||| ||||||||| |||||    
T  25968 agagaatttgagaattaggttaaagtgaggaattggtgatt 25928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 46225 - 46365
Alignment:
Q  31 ctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaa 129  Q
    |||||||||| |||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||| ||| |||| | |||     
T  46225 ctgcgattttcatattctaaggtaagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaagattgaattag 46324  T
Q  130 ggaagttggagaatta-ggttaaagcgaggaattgatgatt 169  Q
     ||||||||||||||| |||||||| ||| |||||| ||||    
T  46325 agaagttggagaattagggttaaagtgagaaattgaggatt 46365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 2982 - 2861
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaattagg 147  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||| ||| ||  | || |||| |||||    
T  2982 aaggtaagggtgagactagcattcaatcttattaagtctttaattctgatgattaaatttaacaagtgtaggattagttttagataatttgagagttagg 2883  T
Q  148 ttaaagcgaggaattgatgatt 169  Q
    |||||| ||| |||||||||||    
T  2882 ttaaagtgagaaattgatgatt 2861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 21119806 - 21119927
Alignment:
Q  48 caaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaag-ttggagaatta 145  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||||||  ||||| || ||||||||    
T  21119806 caaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattaattt-tggaagatttgagaatta 21119904  T
Q  146 -ggttaaagcgaggaattgatga 167  Q
     |||||||| |||||||||||||    
T  21119905 gggttaaagtgaggaattgatga 21119927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 16447755 - 16447875
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaag-ttggagaatta- 145  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| || |||||| |||  ||| | || ||||||||     
T  16447755 aaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggattagttt-tggaggatttgagaattag 16447853  T
Q  146 ggttaaagcgaggaattgatga 167  Q
    |||||||| |||||||||||||    
T  16447854 ggttaaagtgaggaattgatga 16447875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 19102463 - 19102583
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaag-ttggagaatta- 145  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||| || |||||| |||  ||| | || ||||||||     
T  19102463 aaggtaagggtgagactaacattcaatcttattaagtcagtaattctgatgattaaatttaacaagggtgggattagttt-tggaggatttgagaattag 19102561  T
Q  146 ggttaaagcgaggaattgatga 167  Q
    |||||||| |||||||||||||    
T  19102562 ggttaaagtgaggaattgatga 19102583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 1599115 - 1599056
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  1599115 gagagacctaggaagctgcgatttttatattccaaggtaagggtgggactaacattcaat 1599056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 3850997 - 3851072
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatta 123  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||| || ||||||    
T  3850997 aaggtaagggtgagactaacattcaatcttattaagtccgtaattctgatgattaaatttaacaagggtgggatta 3851072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 19024346 - 19024272
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatt 122  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  19024346 aaggtaagggtgagacttgcattcaattctattaagtctgtaattctgatgattaagtttaacaagtgtaggatt 19024272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 23527301 - 23527355
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| |||||||||||||| || ||||| ||||||||||||||||||    
T  23527301 aaggtaagggtgggactagcattcaattttcttaagcctgtaattctgatgatta 23527355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 22387687 - 22387648
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaa 55  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  22387687 gagagacctaggaagctgcgatttttatattccaaggtaa 22387648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 23665036 - 23665172
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgta--attctgatgatt-actttaacaagagtaggatt-aa 124  Q
    |||||||||||||  |||| |||||||||||||||||||||||||||  |||||| ||| ||  ||||||||| ||   |||| |||||||||||||  |    
T  23665036 agctgcgatttttg-attctaaggtaagggtgagactagcattcaattctattaa-tctatatgattctgatggttgtatttagcaagagtaggattgga 23665133  T
Q  125 tttaaggaagttggagaattaggttaaagcgaggaattg 163  Q
    ||||  |||||| |||||||||||||||| || ||||||    
T  23665134 tttagagaagtttgagaattaggttaaagtgaagaattg 23665172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 23531878 - 23531945
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctga 97  Q
    |||||||||||  ||||| |||||||||||| ||||| ||||||||||| ||||| || | |||||||    
T  23531878 gctgcgattttcttattctaaggtaagggtgggactaacattcaatcttcttaagcctatgattctga 23531945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 14978544 - 14978598
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| |||| |||||||| ||||    
T  14978544 aaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataatta 14978598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 18697481 - 18697427
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||||||||||||||| ||||| || | |||||||| ||||    
T  18697481 aaggtaagggtgggactagcattcaatcttcttaagcctatgattctgataatta 18697427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 19669371 - 19669250
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaattag 146  Q
    |||||||||||||||||| ||||||||| ||||||| | | ||||||||||| ||   |||| ||||    |||||||||||   |||||||| ||||||    
T  19669371 aaggtaagggtgagactaacattcaatcctattaagttgtataattctgatggttgtatttagcaagttgtggattaatttagaaaagttgga-aattag 19669273  T
Q  147 gttaaagcgaggaattgatgatt 169  Q
    ||||||| ||| |||||||||||    
T  19669272 gttaaagtgagaaattgatgatt 19669250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 25618901 - 25618955
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| |||| |||||||| ||||    
T  25618901 aaggtaagggtgggactaacattcaatcttcttaagcctgtgattctgataatta 25618955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 27332500 - 27332537
Alignment:
Q  38 ttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  27332500 ttttttattctaaggtaagggtgagactagcattcaat 27332537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 27393240 - 27393277
Alignment:
Q  38 ttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  27393240 ttttttattctaaggtaagggtgagactagcattcaat 27393277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 169
Target Start/End: Original strand, 5460 - 5583
Alignment:
Q  48 caaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaag-gaagttggagaatta 145  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||   ||||||||| ||||||||| ||| || ||||||||| | |      
T  5460 caaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatggttgtatttaacaagtgtaggattagttttagagaagttggaaactag 5559  T
Q  146 ggttaaagcgaggaattgatgatt 169  Q
    |||||||| ||| |||||||||||    
T  5560 ggttaaagtgagaaattgatgatt 5583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 169
Target Start/End: Original strand, 22494 - 22621
Alignment:
Q  43 tattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgat-gattactttaacaagagtaggattaatttaaggaagttggaga 141  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||| | ||  ||||||||| ||||| ||| ||| ||  | || ||||    
T  22494 tattctaaggtaagggtgagactagcatgcaatcctattaagtctgtaattctgatggttttatttaacaagtgtagggttagttttagagaatttgaga 22593  T
Q  142 attaggttaaagcgaggaattgatgatt 169  Q
    |||||||||||| ||| |||||||||||    
T  22594 attaggttaaagtgagaaattgatgatt 22621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 17366 - 17488
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaag-gaagttggagaattag 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||   ||||||||| ||||||||| ||| || ||||||||| | |  |    
T  17366 aaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatggttgtatttaacaagtgtaggattagttttagtgaagttggaaactagg 17465  T
Q  147 gttaaagcgaggaattgatgatt 169  Q
    ||||||| ||| |||||||||||    
T  17466 gttaaagtgagaaattgatgatt 17488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 229 - 322
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatt 122  Q
    |||||||||||  ||||| ||| |||||||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  229 gctgcgattttcttattctaagataagggtgagactagcattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggatt 322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 268620 - 268499
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta-ctttaacaagagtaggattaatttaaggaagttggagaattagg 147  Q
    ||||||||||||||||||  |||||||  ||||||| ||||||||||||||||||  ||||||||| ||||||||||||||  ||||||||||| |  ||    
T  268620 aaggtaagggtgagactattattcaattatattaagcctgtaattctgatgattagatttaacaagtgtaggattaatttagagaagttggagattaggg 268521  T
Q  148 ttaaagcgaggaattgatgatt 169  Q
    |||||| ||| |||||| ||||    
T  268520 ttaaagtgagaaattgaggatt 268499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 128082 - 128174
Alignment:
Q  32 tgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatta 123  Q
    ||||||||  || ||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||| |||||||||    
T  128082 tgcgatttcgattttctaaggtaagggtgagattagcattcaatcttattaagtttgtaattctgatgattaaatttaacaagtgtaggatta 128174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 169
Target Start/End: Complemental strand, 81246 - 81121
Alignment:
Q  44 attccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgattactttaacaagagtaggattaatttaaggaagttggagaat 143  Q
    |||| |||||||||||||||||||||||||||  ||||||| |||||||||||||| ||   || ||||| ||||||||||||||  ||||||||| |||    
T  81246 attctaaggtaagggtgagactagcattcaattctattaaggctgtaattctgatggttgtattgacaagtgtaggattaatttagagaagttgga-aat 81148  T
Q  144 tagg-ttaaagcgaggaattgatgatt 169  Q
    |||| || ||| ||| |||||||||||    
T  81147 tagggtttaagtgagaaattgatgatt 81121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 117499 - 117445
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  117499 aaggtaagggtgagactaacattcaatcttattaagtctgtaattatgatgatta 117445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 72629 - 72554
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatta 123  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||    
T  72629 aaggtaagggtgagactaacattcaatcttattaagtctgtaattctgatgattaaatttaacaagggtgggatta 72554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 13753 - 13853
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgta--attctgatga-ttactttaacaagagtaggattaatttaaggaagttggagaatta 145  Q
    |||||||||||||||||||||||||||  |||||| ||| ||  |||||||||| ||  |||| |||| |||||||| | |||  |||||||||||||||    
T  13753 aaggtaagggtgagactagcattcaattctattaa-tctatatgattctgatgattttatttagcaagtgtaggattgaattagagaagttggagaatta 13851  T
Q  146 gg 147  Q
    ||    
T  13852 gg 13853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 39288 - 39166
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaatta-g 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||   ||||||||| ||||||||  ||| || ||  | |||||||| |    
T  39288 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctaatggttgtatttaacaagtgtaggatttgttttagaaaagttgagaattagg 39189  T
Q  147 gttaaagcgaggaattgatgatt 169  Q
    ||||||| ||| |||||||||||    
T  39188 gttaaagtgagaaattgatgatt 39166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 60810 - 60751
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  60810 gagagacctaggaagctgcgatttttatattccaaggtaagggtgggactaacattcaat 60751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 185143 - 185084
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  185143 gagagacctaggaagctgcgatttttatattccaaggtaagggtgggactaacattcaat 185084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 7626 - 7552
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggatt 122  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | ||||||||| ||||||||    
T  7626 aaggtaagggtgagactaacattcaattctattaagtctgtaattctgatgattaaatttaacaagtgtaggatt 7552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 17448 - 17514
Alignment:
Q  28 aagctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||  |||||| ||||||||||    
T  17448 aagctgcgatttttacattctaaggtaagggtgagactagcattcaattctattaattctgtaattc 17514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 887 - 1007
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaa-gtctgtaattctgatgatt-actttaacaagagtaggattaatt 126  Q
    |||||||||||| | |||| ||||||||||||||||||||||||||| |||||||  | | ||||||||||| ||   ||||||||| ||||||||||||    
T  887 agctgcgattttca-attctaaggtaagggtgagactagcattcaattttattaatctatataattctgatggttgtatttaacaagtgtaggattaatt 985  T
Q  127 taag-gaagttggagaattagg 147  Q
    | || |||||||||||||||||    
T  986 ttagagaagttggagaattagg 1007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 11948 - 11889
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  11948 gagagacctaggaagctgcgttttttatattccaaggtacgggtgagactaacattcaat 11889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 29709 - 29634
Alignment:
Q  19 agacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    ||||| || ||||||||||||| | |||| |||||||||||||||||||||||||||  |||||| ||||||||||    
T  29709 agactaagaaagctgcgattttcacattctaaggtaagggtgagactagcattcaattctattaattctgtaattc 29634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 43136 - 43195
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  43136 gagagacctaggaagctgccatttttatattccaaggtaagggtgggactaacattcaat 43195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 2695 - 2641
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  2695 aaggtaagggtgagactaacattcaatcttcttaagtctataattctgatgatta 2641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 12932 - 12790
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaattt 127  Q
    |||| ||||||| |||||| |||||||||||||||||| | | ||||  |||||||||||||||||||||| ||   ||||||||| |||||||| | ||    
T  12932 agctacgattttcatattctaaggtaagggtgagactaacttacaattctattaagtctgtaattctgatggttgtatttaacaagtgtaggattgaatt 12833  T
Q  128 aaggaagttggagaattagg-ttaaagcgaggaattgatgatt 169  Q
    |  ||| ||||| ||||||| |||||| ||| |||||| ||||    
T  12832 agagaaattggaaaattaggcttaaagagagaaattgaggatt 12790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 79367 - 79307
Alignment:
Q  44 attccaaggtaagggtgagactagcattcaatcttattaagtctgt-aattctgatgatta 103  Q
    |||| |||||||||||||||||| |||||||||||||||||||||| |||||| |||||||    
T  79367 attctaaggtaagggtgagactaacattcaatcttattaagtctgtaaattctaatgatta 79307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 203517 - 203576
Alignment:
Q  25 aggaagctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaag 84  Q
    ||||||||||||||||   |||  |||||||||||||||||| ||||||||||| |||||    
T  203517 aggaagctgcgattttggaattataaggtaagggtgagactaacattcaatcttcttaag 203576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 59887 - 60003
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaattag 146  Q
    |||||||||||||||||||||||||||  ||||||| | | ||||||||||| ||   ||||||||| ||||||||||||||  ||||||||| | | ||    
T  59887 aaggtaagggtgagactagcattcaattctattaagttgtataattctgatggttgtatttaacaagtgtaggattaatttagagaagttggaaattaag 59986  T
Q  147 gttaaagcgaggaattg 163  Q
    ||||||| ||| |||||    
T  59987 gttaaagtgagaaattg 60003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 7262 - 7206
Alignment:
Q  47 ccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||| ||||| ||||||||||| ||||| || | |||||||||||||    
T  7262 ccaaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgatta 7206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 333288 - 333234
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| |||||||| || |||||||| |||||||||||||||    
T  333288 aaggtaagggtgagactaacattcaattttcttaagtctataattctgatgatta 333234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 13582 - 13462
Alignment:
Q  29 agctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaa-gtctgtaattctgatgatt-actttaacaagagtaggattaatt 126  Q
    |||||||||||| | |||| |||||||||||||||||||||||||||  ||||||  | | ||||||||||| ||   ||||||||| |||||||| |||    
T  13582 agctgcgattttca-attctaaggtaagggtgagactagcattcaattctattaatttatataattctgatggttgtatttaacaagtgtaggattgatt 13484  T
Q  127 taag-gaagttggagaattagg 147  Q
    | || |||||||||||||||||    
T  13483 ttagagaagttggagaattagg 13462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 12445 - 12397
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctga 97  Q
    |||||||||||||||||||||||||||||| |||||||| | |||||||    
T  12445 aaggtaagggtgagactagcattcaatcttcttaagtctatgattctga 12397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 11353 - 11298
Alignment:
Q  19 agacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  11353 agacctagaaagctgcgattttt-tattctaaggtaagggtgagactagcattcaat 11298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 37; Significance: 0.000000000006; HSPs: 4)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 16086 - 16186
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta-ctttaacaag-agtaggattaatttaaggaagttggagaattag 146  Q
    |||||||||||||||||| |||||||| || |||||||| |||||| ||||||||  |||| ||||  ||||||||| |||  | |||||||||||||||    
T  16086 aaggtaagggtgagactaacattcaattttcttaagtctataattcggatgattagatttagcaagttgtaggattagtttttgaaagttggagaattag 16185  T
Q  147 g 147  Q
    |    
T  16186 g 16186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 25273 - 25373
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta-ctttaacaag-agtaggattaatttaaggaagttggagaattag 146  Q
    |||||||||||||||||| |||||||| || |||||||  |||||||||||||||  |||| ||||  ||||||||| |||  | |||||||||||||||    
T  25273 aaggtaagggtgagactaacattcaattttcttaagtcgataattctgatgattagatttagcaagttgtaggattagtttttgaaagttggagaattag 25372  T
Q  147 g 147  Q
    |    
T  25373 g 25373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 11904 - 11868
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagacta 66  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  11904 gctgcgattttcatattctaaggtaagggtgagacta 11868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 15414 - 15378
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagacta 66  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  15414 gctgcgattttcatattctaaggtaagggtgagacta 15378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 152
Target Start/End: Original strand, 37284 - 37387
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta-ctttaacaagagtaggattaatttaaggaagttggagaattagg 147  Q
    |||||||||||||||||| ||||||||||| ||||| || | |||||||||||||  ||||||| | ||||| ||| |||  | |||||||| |||||||    
T  37284 aaggtaagggtgagactaacattcaatcttcttaagcctatgattctgatgattagatttaacatgtgtaggtttagtttttgaaagttgga-aattagg 37382  T
Q  148 ttaaa 152  Q
    |||||    
T  37383 ttaaa 37387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 167172 - 167210
Alignment:
Q  28 aagctgcgatttttatattccaaggtaagggtgagacta 66  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  167172 aagctgcgattttcatattctaaggtaagggtgagacta 167210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0925 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0925
Description:

Target: scaffold0925; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 1814 - 1853
Alignment:
Q  16 gagagacttaggaagctgcgatttttatattccaaggtaa 55  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  1814 gagagacctaggaagctgcgatttttatattccaaggtaa 1853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 18857 - 18908
Alignment:
Q  52 gtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    ||||||||||||||| |||||||| || |||||||| |||||||||||||||    
T  18857 gtaagggtgagactaacattcaattttcttaagtctataattctgatgatta 18908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1835 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 258 - 204
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| || |||||||||||||||    
T  258 aaggtaagggtgcgactaacattcaatcttcttaagcctttaattctgatgatta 204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 9852 - 9798
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||||||||| ||||||||||| ||||| || | |||||||||||||    
T  9852 aaggtaagggtgagactaacattcaatcttcttaagcctatgattctgatgatta 9798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 28697 - 28751
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| || |||||||||||||||    
T  28697 aaggtaagggtgggactaacattcaatcttcttaagcctttaattctgatgatta 28751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 25476 - 25597
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaatta-g 146  Q
    |||||||||||||||||| | | ||||  |||||||||||||||||||||||||   |||| |||| |||||||| | |||  ||||||||| ||||| |    
T  25476 aaggtaagggtgagactaacttacaattctattaagtctgtaattctgatgattgtatttagcaagtgtaggattgaattagagaagttgga-aattagg 25574  T
Q  147 gttaaagcgaggaattgatgatt 169  Q
    ||| ||| |||||||| ||||||    
T  25575 gtttaagtgaggaattaatgatt 25597  T

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Target: scaffold0247 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 17227 - 17272
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||    
T  17227 gctgcgattttattattctaaggtaagggtgagactagcattcaat 17272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 32214 - 32145
Alignment:
Q  28 aagctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctga 97  Q
    ||||||||||||| | |||  |||||||||||||||||| ||||||||||| ||||| || | |||||||    
T  32214 aagctgcgattttcacattttaaggtaagggtgagactaacattcaatcttcttaagcctatgattctga 32145  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 4673 - 4738
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatt-actttaacaag 113  Q
    |||||||||||| || |||||| |||| || |||||||| |||||||||||||| |||||||||||    
T  4673 aaggtaagggtgggattagcatccaattttcttaagtctataattctgatgattaactttaacaag 4738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 10846 - 10783
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    ||||||||||||  |||| |||||||||||||||||||||||||||  |||| | ||||||||||    
T  10846 gctgcgatttttg-attctaaggtaagggtgagactagcattcaattctattgattctgtaattc 10783  T

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Target: scaffold0084 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 11105 - 11029
Alignment:
Q  19 agacttaggaagctgcgatttttatattccaaggtaagggtgagactagcatt-caatcttattaagtctgtaattc 94  Q
    |||| ||||||||||||||||| | |||| |||||||||||||||||| | || ||||  |||||||||||| ||||    
T  11105 agacctaggaagctgcgattttcacattctaaggtaagggtgagactaactttgcaattatattaagtctgtgattc 11029  T

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Target: scaffold0075 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 50747 - 50847
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaa-gtctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaattag 146  Q
    |||||||||||||||||||||||||||  ||||||  | | ||||||||||||||   |||| |||| |||||||| | |||  ||||||||||||||||    
T  50747 aaggtaagggtgagactagcattcaattgtattaatctatataattctgatgattgtatttagcaagtgtaggattgaattacagaagttggagaattag 50846  T
Q  147 g 147  Q
    |    
T  50847 g 50847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 135527 - 135646
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaatta- 145  Q
    |||||||| ||||||||||||||||||  ||||||| | | ||||||||||| ||   |||| |||| ||||||||||||||  ||||||||| |||||     
T  135527 aaggtaagagtgagactagcattcaattctattaagttgtataattctgatggttgtatttagcaagtgtaggattaatttagagaagttgga-aattag 135625  T
Q  146 ggttaaagcgaggaattgatg 166  Q
    |||||||| ||| ||||||||    
T  135626 ggttaaagtgagaaattgatg 135646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 144235 - 144354
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaag-tctgtaattctgatgatt-actttaacaagagtaggattaatttaaggaagttggagaatta- 145  Q
    |||||||| ||||||||||||||||||  ||||||| | | ||||||||||| ||   |||| |||| ||||||||||||||  ||||||||| |||||     
T  144235 aaggtaagagtgagactagcattcaattctattaagttgtataattctgatggttgtatttagcaagtgtaggattaatttagagaagttgga-aattag 144333  T
Q  146 ggttaaagcgaggaattgatg 166  Q
    |||||||| ||| ||||||||    
T  144334 ggttaaagtgagaaattgatg 144354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 8623 - 8677
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagt 85  Q
    ||||||||||||  |||| |||||||||||||||||||||||||||  ||||||||    
T  8623 gctgcgatttttg-attctaaggtaagggtgagactagcattcaattctattaagt 8677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 163541 - 163612
Alignment:
Q  32 tgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||  ||||| ||||||| |||||||||| ||||||||||| ||||| || | |||||||| ||||    
T  163541 tgcgattttcttattctaaggtaacggtgagactaacattcaatcttcttaagcctatgattctgataatta 163612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 160260 - 160333
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||  ||||| ||||||||||| |||||| |||||| |||| ||||| || | |||||||| ||||    
T  160260 gctgcgattttcttattctaaggtaagggtaagactaacattcactcttcttaagcctatgattctgataatta 160333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 242 - 280
Alignment:
Q  28 aagctgcgatttttatattccaaggtaagggtgagacta 66  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  242 aagctgcgattttcatattctaaggtaagggtgagacta 280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 1007 - 953
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    ||||||||| || |||||||||||||| || |||||||| ||||| |||||||||    
T  1007 aaggtaaggctgggactagcattcaattttcttaagtctataattatgatgatta 953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 4916 - 4866
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatg 99  Q
    |||||||||||| ||||||||||||||  |||||||||| | |||||||||    
T  4916 aaggtaagggtgggactagcattcaattctattaagtctatgattctgatg 4866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 14141 - 14097
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||    
T  14141 gctgcgattttgat-ttctaaggtaagggtgagactagcattcaat 14097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 12304 - 12266
Alignment:
Q  28 aagctgcgatttttatattccaaggtaagggtgagacta 66  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  12304 aagctgcgattttcatattcgaaggtaagggtgagacta 12266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 31371 - 31421
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatg 99  Q
    |||||||||||| ||||||||||||||  |||||||||| | |||||||||    
T  31371 aaggtaagggtgggactagcattcaattctattaagtctatgattctgatg 31421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 26413 - 26467
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaa-gtctgtaattctgatgatt 102  Q
    |||||||||||||||||||||||||||  ||||||  | ||||||||||||||||    
T  26413 aaggtaagggtgagactagcattcaattctattaacctatgtaattctgatgatt 26467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 10788 - 10734
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| |  |||||||||||||||    
T  10788 aaggtaagggtgggactaacattcaatcttcttaagccgttaattctgatgatta 10734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 13553 - 13607
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| |  |||||||||||||||    
T  13553 aaggtaagggtgggactaacattcaatcttcttaagccgttaattctgatgatta 13607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 31210 - 31145
Alignment:
Q  19 agacttaggaagctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagt 85  Q
    |||| ||||||||||||||||| ||  |  |||||||||||||||||||||||||||  ||||||||    
T  31210 agacctaggaagctgcgattttgattgtt-aaggtaagggtgagactagcattcaattctattaagt 31145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 220335 - 220389
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctgatgatta 103  Q
    |||||||||||| ||||| ||||||||||| ||||| || | |||||||||||||    
T  220335 aaggtaagggtgggactaacattcaatcttcttaagcctatgattctgatgatta 220389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 248 - 305
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaatcttattaagtct 87  Q
    ||||||||||| ||  | ||||||||||||||||||| | | ||||||||||||||||    
T  248 gctgcgattttcatcatacaaggtaagggtgagactaacttgcaatcttattaagtct 305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 7549 - 7505
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||||||| ||||| |||||||||||||||||| ||||||||    
T  7549 gctgcgattttt-tattctaaggtaagggtgagactaacattcaat 7505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 14929 - 14885
Alignment:
Q  30 gctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||||||| ||||| |||||||||||||||||| ||||||||    
T  14929 gctgcgattttt-tattctaaggtaagggtgagactaacattcaat 14885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 14555 - 14510
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    ||||||||| |||||||||||||||||  |||||| ||||||||||    
T  14555 aaggtaaggatgagactagcattcaattctattaattctgtaattc 14510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 1637 - 1682
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattc 94  Q
    |||||||||||||||||||||| ||||  |||||| ||||||||||    
T  1637 aaggtaagggtgagactagcatacaattctattaattctgtaattc 1682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 15040 - 15077
Alignment:
Q  38 ttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  15040 ttttttattctaaggtaagggtgagactagcattcaat 15077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 1130 - 1090
Alignment:
Q  44 attccaaggtaagggtgagactagcattcaatcttattaag 84  Q
    |||| |||||||||||||||||| ||||||||||| |||||    
T  1130 attctaaggtaagggtgagactaacattcaatcttcttaag 1090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 231 - 267
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagt 85  Q
    |||||||||||||||||||||||||||  ||||||||    
T  231 aaggtaagggtgagactagcattcaattctattaagt 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 19301 - 19349
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagtctgtaattctga 97  Q
    |||||||||||||||||| ||||||||||| ||||| || | |||||||    
T  19301 aaggtaagggtgagactaacattcaatcttcttaagcctatgattctga 19349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 5325 - 5361
Alignment:
Q  49 aaggtaagggtgagactagcattcaatcttattaagt 85  Q
    |||||||||||||||||||||||||||  ||||||||    
T  5325 aaggtaagggtgagactagcattcaattctattaagt 5361  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 33433 - 33386
Alignment:
Q  27 gaagctgcgatttttatattccaaggtaagggtgagactagcattcaat 75  Q
    |||||||||||||| || | | |||||||||||||||||||||||||||    
T  33433 gaagctgcgattttcat-tgctaaggtaagggtgagactagcattcaat 33386  T

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