View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1284_low_2 (Length: 618)

Name: NF1284_low_2
Description: NF1284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1284_low_2
NF1284_low_2
[»] chr1 (90 HSPs)
chr1 (367-609)||(32048633-32048875)
chr1 (177-375)||(32047543-32047742)
chr1 (177-285)||(3831149-3831258)
chr1 (177-312)||(5084945-5085090)
chr1 (177-285)||(48721761-48721869)
chr1 (177-283)||(51390432-51390538)
chr1 (15-99)||(32047381-32047465)
chr1 (177-285)||(34012589-34012697)
chr1 (177-285)||(5321914-5322024)
chr1 (179-285)||(34696775-34696882)
chr1 (177-285)||(36085072-36085181)
chr1 (177-285)||(3143505-3143615)
chr1 (179-285)||(15512673-15512780)
chr1 (179-285)||(28948856-28948963)
chr1 (180-285)||(47643645-47643751)
chr1 (178-285)||(52141067-52141175)
chr1 (177-285)||(28334112-28334222)
chr1 (194-283)||(47753931-47754021)
chr1 (177-285)||(33231942-33232051)
chr1 (177-285)||(25269479-25269587)
chr1 (40-99)||(5085169-5085228)
chr1 (177-283)||(46732855-46732961)
chr1 (180-285)||(4817798-4817904)
chr1 (180-285)||(4829598-4829704)
chr1 (183-285)||(34102472-34102573)
chr1 (185-285)||(51997066-51997167)
chr1 (177-279)||(10160814-10160917)
chr1 (177-264)||(23982505-23982593)
chr1 (177-285)||(29140549-29140655)
chr1 (185-285)||(46495420-46495520)
chr1 (40-99)||(3143367-3143426)
chr1 (177-283)||(32152260-32152365)
chr1 (177-283)||(44163326-44163431)
chr1 (177-285)||(9684608-9684719)
chr1 (179-285)||(15179514-15179621)
chr1 (217-285)||(49033815-49033884)
chr1 (177-285)||(25063312-25063423)
chr1 (40-99)||(48721948-48722008)
chr1 (187-285)||(29302381-29302480)
chr1 (40-99)||(33231804-33231863)
chr1 (177-276)||(4813362-4813463)
chr1 (178-255)||(8877875-8877953)
chr1 (177-263)||(15911467-15911553)
chr1 (178-285)||(28723542-28723651)
chr1 (37-99)||(29302529-29302591)
chr1 (177-254)||(44652784-44652862)
chr1 (42-99)||(9675747-9675804)
chr1 (177-285)||(30898455-30898564)
chr1 (200-311)||(32715918-32716038)
chr1 (42-99)||(35001350-35001407)
chr1 (177-283)||(35365876-35365985)
chr1 (195-285)||(5852596-5852687)
chr1 (177-283)||(3072239-3072345)
chr1 (194-283)||(7957581-7957673)
chr1 (30-96)||(29140737-29140803)
chr1 (177-240)||(30336161-30336226)
chr1 (223-284)||(12844036-12844097)
chr1 (177-276)||(9380663-9380762)
chr1 (177-256)||(13698933-13699013)
chr1 (181-285)||(25258437-25258541)
chr1 (177-255)||(4082028-4082107)
chr1 (40-95)||(5322107-5322162)
chr1 (40-95)||(10160683-10160738)
chr1 (48-99)||(16582505-16582556)
chr1 (40-99)||(34696963-34697022)
chr1 (54-99)||(28334295-28334340)
chr1 (45-98)||(30336028-30336081)
chr1 (194-250)||(17426653-17426709)
chr1 (177-254)||(32144413-32144492)
chr1 (178-234)||(37733694-37733749)
chr1 (177-285)||(16582635-16582746)
chr1 (177-255)||(20564877-20564958)
chr1 (245-311)||(41737241-41737316)
chr1 (177-285)||(44395637-44395749)
chr1 (41-99)||(8877737-8877795)
chr1 (40-98)||(12845067-12845125)
chr1 (185-227)||(44335403-44335445)
chr1 (41-99)||(47643508-47643565)
chr1 (177-285)||(2343006-2343111)
chr1 (42-95)||(3831015-3831068)
chr1 (40-97)||(13723560-13723617)
chr1 (42-99)||(25269343-25269400)
chr1 (177-226)||(27531201-27531250)
chr1 (193-250)||(32321896-32321952)
chr1 (177-256)||(8984583-8984662)
chr1 (211-239)||(9094701-9094729)
chr1 (227-263)||(13723383-13723419)
chr1 (200-285)||(23393146-23393233)
chr1 (227-283)||(24415142-24415198)
chr1 (44-92)||(36084938-36084986)
[»] chr7 (59 HSPs)
chr7 (177-285)||(4089394-4089502)
chr7 (177-313)||(1324811-1324956)
chr7 (177-285)||(10685188-10685296)
chr7 (177-285)||(35128487-35128597)
chr7 (177-311)||(48767668-48767812)
chr7 (177-283)||(18121939-18122044)
chr7 (177-285)||(37673840-37673949)
chr7 (177-285)||(48610031-48610138)
chr7 (177-283)||(19235960-19236069)
chr7 (177-285)||(29723564-29723672)
chr7 (178-285)||(47458080-47458187)
chr7 (177-283)||(29635936-29636043)
chr7 (177-276)||(40741055-40741154)
chr7 (180-285)||(21388348-21388454)
chr7 (179-285)||(21759825-21759932)
chr7 (179-285)||(26632951-26633058)
chr7 (177-285)||(40263814-40263924)
chr7 (200-283)||(5333794-5333879)
chr7 (177-255)||(28663858-28663936)
chr7 (177-285)||(36726065-36726176)
chr7 (40-99)||(4089581-4089640)
chr7 (177-251)||(21809574-21809649)
chr7 (177-276)||(27170114-27170213)
chr7 (177-250)||(28038816-28038890)
chr7 (185-283)||(33181406-33181503)
chr7 (177-285)||(49100774-49100887)
chr7 (231-282)||(8318689-8318740)
chr7 (40-87)||(29723426-29723473)
chr7 (44-99)||(48767533-48767588)
chr7 (180-285)||(2276472-2276576)
chr7 (41-98)||(36116287-36116344)
chr7 (37-86)||(36726267-36726316)
chr7 (178-285)||(36116425-36116529)
chr7 (45-97)||(37673707-37673759)
chr7 (185-285)||(20123562-20123657)
chr7 (177-263)||(27162818-27162905)
chr7 (177-255)||(35960481-35960560)
chr7 (194-236)||(17772443-17772485)
chr7 (194-255)||(29993136-29993197)
chr7 (194-285)||(31365717-31365807)
chr7 (177-285)||(42983507-42983616)
chr7 (177-248)||(13907673-13907745)
chr7 (223-283)||(34118160-34118220)
chr7 (200-261)||(40211086-40211149)
chr7 (40-91)||(1324673-1324724)
chr7 (177-239)||(10408507-10408570)
chr7 (177-256)||(37048138-37048215)
chr7 (194-250)||(41672461-41672519)
chr7 (40-99)||(49100636-49100695)
chr7 (43-97)||(18122125-18122179)
chr7 (37-99)||(20123412-20123474)
chr7 (197-286)||(21800949-21801038)
chr7 (179-256)||(23876142-23876220)
chr7 (42-99)||(35128353-35128408)
chr7 (177-234)||(19477154-19477211)
chr7 (40-97)||(20124153-20124210)
chr7 (177-240)||(25750471-25750538)
chr7 (177-250)||(27213590-27213665)
chr7 (37-77)||(33181117-33181157)
[»] chr8 (76 HSPs)
chr8 (177-285)||(57082-57191)
chr8 (177-285)||(38761250-38761361)
chr8 (177-285)||(31252549-31252658)
chr8 (177-285)||(1177049-1177159)
chr8 (178-285)||(1769343-1769450)
chr8 (177-283)||(31746302-31746408)
chr8 (177-285)||(38202886-38202995)
chr8 (179-285)||(10396124-10396231)
chr8 (177-283)||(7172322-7172427)
chr8 (180-316)||(40517846-40517992)
chr8 (177-285)||(5191443-5191552)
chr8 (177-285)||(26878622-26878731)
chr8 (177-285)||(24512060-24512170)
chr8 (179-285)||(24962259-24962366)
chr8 (177-283)||(25198392-25198498)
chr8 (177-314)||(38773204-38773351)
chr8 (177-263)||(45203861-45203948)
chr8 (177-285)||(40337085-40337194)
chr8 (177-285)||(7772615-7772723)
chr8 (184-283)||(10860830-10860930)
chr8 (177-285)||(37956224-37956326)
chr8 (179-285)||(43980477-43980584)
chr8 (180-285)||(45183756-45183861)
chr8 (177-285)||(12762945-12763053)
chr8 (177-263)||(14577566-14577655)
chr8 (185-285)||(2562622-2562724)
chr8 (44-99)||(25184999-25185054)
chr8 (177-281)||(25185133-25185241)
chr8 (179-285)||(37141831-37141938)
chr8 (177-283)||(39543556-39543663)
chr8 (177-285)||(40790891-40791000)
chr8 (177-283)||(41371697-41371807)
chr8 (180-259)||(14522264-14522344)
chr8 (177-283)||(37600783-37600891)
chr8 (179-285)||(34158022-34158128)
chr8 (40-95)||(40337277-40337332)
chr8 (177-285)||(43191375-43191480)
chr8 (180-283)||(45185162-45185267)
chr8 (199-283)||(4273862-4273947)
chr8 (177-277)||(22590478-22590579)
chr8 (50-99)||(25198264-25198313)
chr8 (177-255)||(36437604-36437684)
chr8 (42-98)||(16002806-16002862)
chr8 (40-99)||(37956087-37956145)
chr8 (177-283)||(40807907-40808014)
chr8 (177-283)||(41087077-41087183)
chr8 (180-285)||(885567-885672)
chr8 (37-99)||(24512249-24512311)
chr8 (40-86)||(38773444-38773490)
chr8 (223-284)||(16357137-16357198)
chr8 (180-285)||(30262434-30262538)
chr8 (185-285)||(17933816-17933915)
chr8 (177-285)||(23399673-23399780)
chr8 (42-98)||(39543746-39543802)
chr8 (227-283)||(40601936-40601992)
chr8 (40-99)||(10396310-10396369)
chr8 (184-250)||(12998617-12998684)
chr8 (177-277)||(36309497-36309599)
chr8 (177-263)||(38770103-38770190)
chr8 (40-99)||(38770269-38770328)
chr8 (177-311)||(45283346-45283488)
chr8 (40-98)||(57271-57329)
chr8 (177-255)||(10709417-10709495)
chr8 (40-98)||(38203075-38203133)
chr8 (195-283)||(3006020-3006109)
chr8 (194-285)||(31673717-31673809)
chr8 (180-256)||(34116257-34116336)
chr8 (177-239)||(7727289-7727352)
chr8 (177-228)||(14907236-14907287)
chr8 (42-97)||(16644120-16644175)
chr8 (40-99)||(37141691-37141750)
chr8 (185-275)||(11444073-11444162)
chr8 (177-241)||(2031319-2031384)
chr8 (187-236)||(4840794-4840843)
chr8 (177-285)||(23280754-23280860)
chr8 (179-239)||(2237592-2237652)
[»] chr2 (68 HSPs)
chr2 (177-285)||(44424698-44424805)
chr2 (177-285)||(27297680-27297789)
chr2 (177-308)||(15851634-15851775)
chr2 (177-285)||(31644336-31644444)
chr2 (177-285)||(34330105-34330212)
chr2 (177-285)||(17250853-17250963)
chr2 (177-285)||(3237826-3237927)
chr2 (178-285)||(7278506-7278614)
chr2 (179-285)||(17663729-17663836)
chr2 (179-285)||(20362087-20362194)
chr2 (177-285)||(37355139-37355249)
chr2 (177-283)||(8064968-8065074)
chr2 (177-285)||(534568-534677)
chr2 (187-285)||(27749580-27749679)
chr2 (177-285)||(38981964-38982073)
chr2 (179-285)||(9718065-9718172)
chr2 (180-276)||(44274420-44274518)
chr2 (178-283)||(28733927-28734033)
chr2 (177-283)||(41665813-41665918)
chr2 (177-285)||(13534508-13534617)
chr2 (178-285)||(2048723-2048831)
chr2 (177-283)||(7255704-7255809)
chr2 (178-285)||(41865819-41865927)
chr2 (198-285)||(44421857-44421945)
chr2 (177-283)||(25731083-25731188)
chr2 (177-285)||(1246305-1246414)
chr2 (40-97)||(44424560-44424617)
chr2 (196-285)||(45150635-45150726)
chr2 (177-283)||(23464786-23464891)
chr2 (177-285)||(40345969-40346083)
chr2 (177-283)||(2131860-2131966)
chr2 (46-99)||(35178874-35178927)
chr2 (186-263)||(44101484-44101560)
chr2 (179-285)||(2521193-2521300)
chr2 (40-99)||(8065153-8065212)
chr2 (40-99)||(9718253-9718312)
chr2 (177-283)||(11071771-11071879)
chr2 (40-99)||(13534380-13534438)
chr2 (177-283)||(38449609-38449716)
chr2 (223-285)||(4033976-4034038)
chr2 (210-263)||(37037488-37037542)
chr2 (178-255)||(43710023-43710101)
chr2 (177-285)||(24774968-24775077)
chr2 (177-285)||(28264846-28264953)
chr2 (177-311)||(247763-247907)
chr2 (180-285)||(11459259-11459366)
chr2 (180-283)||(14420782-14420886)
chr2 (197-279)||(38107627-38107710)
chr2 (177-283)||(45214828-45214935)
chr2 (177-258)||(375265-375347)
chr2 (213-283)||(4398479-4398549)
chr2 (44-98)||(28733794-28733848)
chr2 (200-250)||(36174721-36174771)
chr2 (41-99)||(41665677-41665734)
chr2 (177-285)||(4758129-4758238)
chr2 (40-97)||(15851496-15851553)
chr2 (177-255)||(32677578-32677658)
chr2 (177-237)||(35178956-35179016)
chr2 (178-256)||(2917023-2917102)
chr2 (194-241)||(6444485-6444532)
chr2 (177-277)||(43119267-43119371)
chr2 (40-94)||(3237686-3237740)
chr2 (178-255)||(42250800-42250880)
chr2 (177-234)||(3326827-3326884)
chr2 (177-285)||(3645426-3645531)
chr2 (40-97)||(17251044-17251101)
chr2 (42-95)||(31644527-31644580)
chr2 (40-97)||(41865681-41865738)
[»] chr4 (86 HSPs)
chr4 (177-285)||(51787874-51787982)
chr4 (177-285)||(54359786-54359894)
chr4 (177-283)||(52552407-52552513)
chr4 (177-282)||(20262292-20262396)
chr4 (177-285)||(24072870-24072979)
chr4 (177-285)||(40411236-40411345)
chr4 (177-285)||(33246391-33246499)
chr4 (177-285)||(25477328-25477437)
chr4 (177-283)||(30153119-30153224)
chr4 (178-283)||(52198623-52198729)
chr4 (177-285)||(41945666-41945775)
chr4 (177-279)||(52226122-52226226)
chr4 (177-311)||(43800911-43801055)
chr4 (178-285)||(31917481-31917587)
chr4 (177-285)||(51918548-51918658)
chr4 (177-311)||(5448765-5448905)
chr4 (180-283)||(43509187-43509292)
chr4 (177-280)||(8246351-8246455)
chr4 (177-280)||(8250480-8250584)
chr4 (177-276)||(7002286-7002385)
chr4 (177-283)||(10602105-10602212)
chr4 (177-285)||(37625017-37625127)
chr4 (200-285)||(5536610-5536696)
chr4 (177-285)||(5168082-5168191)
chr4 (177-283)||(13096436-13096544)
chr4 (177-285)||(16070534-16070643)
chr4 (181-285)||(22651571-22651676)
chr4 (178-283)||(31840200-31840305)
chr4 (177-285)||(46729408-46729517)
chr4 (177-285)||(21171827-21171935)
chr4 (194-285)||(34543825-34543917)
chr4 (189-285)||(50782888-50782983)
chr4 (177-311)||(20116553-20116698)
chr4 (177-285)||(22750735-22750844)
chr4 (194-311)||(31936952-31937080)
chr4 (177-250)||(56373273-56373346)
chr4 (180-283)||(5932992-5933096)
chr4 (177-276)||(39414337-39414437)
chr4 (179-285)||(12624801-12624908)
chr4 (177-285)||(54438613-54438722)
chr4 (41-91)||(5448628-5448678)
chr4 (45-99)||(25477195-25477249)
chr4 (178-283)||(31486592-31486698)
chr4 (185-270)||(52676132-52676218)
chr4 (194-255)||(10541181-10541242)
chr4 (177-285)||(20185553-20185658)
chr4 (178-285)||(39237481-39237590)
chr4 (177-285)||(44812500-44812609)
chr4 (39-99)||(50782742-50782802)
chr4 (40-91)||(16070396-16070447)
chr4 (40-99)||(20262475-20262534)
chr4 (177-283)||(20291443-20291549)
chr4 (40-91)||(43800763-43800814)
chr4 (177-283)||(32236934-32237043)
chr4 (40-98)||(51787736-51787794)
chr4 (179-285)||(26203235-26203343)
chr4 (177-283)||(38136458-38136560)
chr4 (42-99)||(52552592-52552649)
chr4 (200-277)||(36513201-36513280)
chr4 (52-99)||(5536474-5536521)
chr4 (177-263)||(20016624-20016711)
chr4 (177-285)||(20293850-20293960)
chr4 (177-255)||(34643497-34643576)
chr4 (178-285)||(48472389-48472496)
chr4 (223-285)||(20792141-20792203)
chr4 (53-99)||(24072745-24072791)
chr4 (40-99)||(39237670-39237733)
chr4 (177-231)||(56217001-56217055)
chr4 (43-97)||(56217106-56217160)
chr4 (178-275)||(14602554-14602656)
chr4 (31-99)||(48472576-48472645)
chr4 (223-284)||(50438208-50438269)
chr4 (203-283)||(54701189-54701272)
chr4 (177-280)||(31552271-31552375)
chr4 (223-283)||(39196928-39196988)
chr4 (46-98)||(54438481-54438533)
chr4 (177-285)||(19654531-19654641)
chr4 (177-228)||(41919989-41920040)
chr4 (40-99)||(52225984-52226043)
chr4 (40-98)||(22750924-22750982)
chr4 (177-256)||(32107948-32108029)
chr4 (37-99)||(46729268-46729329)
chr4 (177-250)||(48609448-48609522)
chr4 (233-277)||(5416772-5416816)
chr4 (245-285)||(39813851-39813891)
chr4 (40-99)||(40411686-40411746)
[»] chr6 (26 HSPs)
chr6 (177-283)||(30248965-30249071)
chr6 (177-283)||(34513115-34513221)
chr6 (177-285)||(31945806-31945915)
chr6 (177-277)||(28238216-28238316)
chr6 (179-285)||(19839036-19839143)
chr6 (180-311)||(1763919-1764060)
chr6 (177-283)||(9461396-9461503)
chr6 (177-283)||(15981897-15982004)
chr6 (177-283)||(16327226-16327334)
chr6 (177-283)||(16350624-16350732)
chr6 (177-263)||(5895834-5895921)
chr6 (177-285)||(16186673-16186782)
chr6 (177-283)||(30465864-30465971)
chr6 (177-285)||(31536115-31536225)
chr6 (180-285)||(6791482-6791588)
chr6 (40-97)||(5895696-5895753)
chr6 (180-285)||(11302961-11303069)
chr6 (180-283)||(197345-197451)
chr6 (177-256)||(3729525-3729604)
chr6 (177-255)||(3887866-3887945)
chr6 (177-276)||(33607458-33607556)
chr6 (195-285)||(22410736-22410827)
chr6 (177-235)||(5191258-5191316)
chr6 (180-263)||(8644708-8644795)
chr6 (213-277)||(31486964-31487029)
chr6 (37-97)||(5084625-5084685)
[»] chr3 (66 HSPs)
chr3 (177-283)||(20945197-20945304)
chr3 (177-311)||(29676601-29676743)
chr3 (180-283)||(42891524-42891627)
chr3 (177-283)||(28477487-28477593)
chr3 (177-285)||(46048624-46048734)
chr3 (177-285)||(12077636-12077747)
chr3 (177-285)||(26517110-26517219)
chr3 (177-285)||(41727133-41727242)
chr3 (180-278)||(31531029-31531129)
chr3 (177-285)||(31819508-31819617)
chr3 (177-264)||(5504491-5504579)
chr3 (180-283)||(14645786-14645890)
chr3 (177-311)||(44083729-44083873)
chr3 (177-283)||(22659682-22659789)
chr3 (198-285)||(26999167-26999254)
chr3 (177-286)||(39617146-39617254)
chr3 (188-285)||(13084255-13084351)
chr3 (194-285)||(11140816-11140907)
chr3 (177-283)||(29349480-29349587)
chr3 (40-99)||(30476005-30476064)
chr3 (177-285)||(35145333-35145442)
chr3 (177-283)||(41308674-41308780)
chr3 (179-285)||(34055760-34055866)
chr3 (177-283)||(44698418-44698524)
chr3 (177-285)||(43186996-43187105)
chr3 (180-283)||(50524873-50524977)
chr3 (40-99)||(29676822-29676881)
chr3 (180-283)||(31474529-31474632)
chr3 (37-99)||(12077826-12077888)
chr3 (223-285)||(29645473-29645535)
chr3 (177-250)||(30476143-30476217)
chr3 (178-256)||(35055889-35055967)
chr3 (177-283)||(40645776-40645881)
chr3 (177-283)||(53716865-53716971)
chr3 (177-277)||(11388223-11388326)
chr3 (177-285)||(50363129-50363235)
chr3 (177-279)||(831261-831364)
chr3 (178-277)||(44338184-44338283)
chr3 (177-278)||(26043121-26043221)
chr3 (46-98)||(40645644-40645696)
chr3 (177-276)||(48309546-48309645)
chr3 (220-285)||(3475595-3475661)
chr3 (178-256)||(33287969-33288047)
chr3 (223-311)||(11345469-11345566)
chr3 (194-279)||(25750639-25750723)
chr3 (31-99)||(5504625-5504693)
chr3 (177-276)||(21933028-21933128)
chr3 (177-285)||(33411871-33411979)
chr3 (47-99)||(41727321-41727373)
chr3 (177-276)||(41739877-41739977)
chr3 (178-275)||(48902987-48903086)
chr3 (40-95)||(27638164-27638219)
chr3 (178-285)||(31826295-31826400)
chr3 (40-99)||(43187176-43187235)
chr3 (177-285)||(50092770-50092880)
chr3 (198-276)||(4979528-4979606)
chr3 (56-97)||(35145220-35145261)
chr3 (177-269)||(11396823-11396918)
chr3 (40-99)||(26998858-26998918)
chr3 (48-99)||(46048493-46048545)
chr3 (40-96)||(50092632-50092688)
chr3 (177-220)||(27638038-27638081)
chr3 (230-264)||(9178462-9178496)
chr3 (178-220)||(28229268-28229310)
chr3 (40-93)||(50525065-50525118)
chr3 (177-236)||(42010970-42011030)
[»] chr5 (57 HSPs)
chr5 (177-283)||(4738733-4738839)
chr5 (179-285)||(39690378-39690485)
chr5 (178-285)||(9946249-9946358)
chr5 (177-285)||(35568897-35569006)
chr5 (179-285)||(21912225-21912332)
chr5 (177-285)||(3558919-3559028)
chr5 (177-276)||(7736083-7736183)
chr5 (196-283)||(27925395-27925483)
chr5 (177-285)||(40979102-40979213)
chr5 (178-285)||(3631010-3631117)
chr5 (180-283)||(43454088-43454191)
chr5 (178-283)||(38972022-38972127)
chr5 (177-285)||(5151093-5151201)
chr5 (178-285)||(36750668-36750776)
chr5 (180-311)||(15898319-15898461)
chr5 (177-271)||(29866292-29866387)
chr5 (177-285)||(36177395-36177505)
chr5 (177-255)||(10934109-10934187)
chr5 (194-283)||(15966978-15967067)
chr5 (180-285)||(36347493-36347599)
chr5 (179-314)||(27642607-27642752)
chr5 (40-91)||(21574968-21575019)
chr5 (177-285)||(42644367-42644479)
chr5 (177-283)||(4857387-4857495)
chr5 (177-277)||(20946190-20946291)
chr5 (181-285)||(34877773-34877878)
chr5 (178-283)||(10523167-10523274)
chr5 (177-283)||(5845279-5845386)
chr5 (177-255)||(9375561-9375640)
chr5 (177-283)||(27798259-27798366)
chr5 (40-91)||(27925342-27925393)
chr5 (40-86)||(3631211-3631257)
chr5 (177-285)||(3247164-3247275)
chr5 (177-311)||(25017528-25017675)
chr5 (40-96)||(3247357-3247413)
chr5 (223-283)||(7510689-7510749)
chr5 (177-256)||(8717880-8717960)
chr5 (197-278)||(18729715-18729798)
chr5 (233-285)||(25690545-25690597)
chr5 (180-247)||(25690616-25690684)
chr5 (180-283)||(31641084-31641190)
chr5 (180-250)||(16042-16113)
chr5 (195-285)||(20975697-20975788)
chr5 (40-99)||(25017754-25017813)
chr5 (40-99)||(34877631-34877690)
chr5 (37-99)||(5845138-5845200)
chr5 (177-237)||(32068089-32068150)
chr5 (177-233)||(29874261-29874317)
chr5 (177-285)||(19281381-19281493)
chr5 (177-285)||(30347975-30348078)
chr5 (40-95)||(36177257-36177312)
chr5 (25-99)||(10933956-10934030)
chr5 (181-250)||(21574806-21574878)
chr5 (49-99)||(40979292-40979342)
chr5 (226-283)||(129758-129815)
chr5 (178-255)||(600869-600945)
chr5 (199-235)||(39042547-39042583)
[»] scaffold0038 (1 HSPs)
scaffold0038 (177-277)||(38378-38478)
[»] scaffold1091 (1 HSPs)
scaffold1091 (177-283)||(1808-1915)
[»] scaffold0009 (1 HSPs)
scaffold0009 (177-285)||(25801-25911)
[»] scaffold0013 (1 HSPs)
scaffold0013 (177-283)||(49240-49346)
[»] scaffold0121 (2 HSPs)
scaffold0121 (177-285)||(24162-24271)
scaffold0121 (40-91)||(24100-24151)
[»] scaffold0559 (1 HSPs)
scaffold0559 (179-283)||(6614-6719)
[»] scaffold0005 (1 HSPs)
scaffold0005 (178-275)||(214722-214824)
[»] scaffold0176 (1 HSPs)
scaffold0176 (180-228)||(20120-20168)
[»] scaffold0182 (2 HSPs)
scaffold0182 (40-82)||(22030-22072)
scaffold0182 (200-283)||(22554-22639)


Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 367 - 609
Target Start/End: Original strand, 32048633 - 32048875
Alignment:
Q  367 tattttatatttcatcactctctctatttctctaattataacttggccttcctaaagctatactcgagatctagataaacaagttgtatctatttaattt 466  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32048633 tattttatatttcatcactctctctatttctctaattataacttggccgtcctaaagctatactcgagatctagataaacaagttgtatctatttaattt 32048732  T
Q  467 tagccgaaccttcctctaatgaagcttcaatagcttgattctttcctactaagcagtaaataagcactagcaacaactctcccacatataatcaatgtag 566  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32048733 tagccgaaccttcctctaatgaagcttcaatagcttgattctttcctactaagcagtaaataagcactagcaacaactctcccacatataatcaatgtag 32048832  T
Q  567 cagctgctacaaacaacagtactgacaaggatacgagtataat 609  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32048833 cagctgctacaaacaacagtactgacaaggatacgagtataat 32048875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 177 - 375
Target Start/End: Original strand, 32047543 - 32047742
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||| ||    
T  32047543 catatttcaagacaagatagtagtattatttaggggtatgtttaagaaaaaataataaatgcatcaagtaatttgaaaaagggtttacatttagggataa 32047642  T
Q  277 aaataaaatgcttagatatagggacggagggagtacatgcttaaagaacgcccaaagagacgaatacactcgttatcaagacccctt-ttttattttata 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||| ||||||||||||    
T  32047643 aaataaaatgcttagatatagggacggagggagtacatgcttaaagagcgcccaaagaggcgaagacactcgttatcaagaccccttattttattttata 32047742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 3831149 - 3831258
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaat-aataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| |||||||| |||||||||||| |||||||| ||||||||||||| ||||||||||    
T  3831149 catatttcaagacaagatagaagtattaattagggatatgtttaggaaaaaattaataaatgcatctagtaatttgaaaaggggtttacatttagggaca 3831248  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  3831249 aaaataaaat 3831258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 177 - 312
Target Start/End: Complemental strand, 5085090 - 5084945
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||||||||||||||||||| || |||||||| ||||||| ||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  5085090 catatttcaagagaagatagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaaggggtttacatttagggaca 5084991  T
Q  276 aaaataaaa---------tgcttagatatagggacggagggagtac 312  Q
    |||||||||         ||||||||||||||||||||||||||||    
T  5084990 aaaataaaatcaaatgggtgcttagatatagggacggagggagtac 5084945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 48721869 - 48721761
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||| ||||| || |||| |||||||||||    
T  48721869 catatttcaagacaagatagtagtattaattaggggtatgtttaggaaaaaataataaatgcatctagtaatttgaaaagagggttacatttagggacaa 48721770  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  48721769 aaataaaat 48721761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 51390538 - 51390432
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| ||||||| ||||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  51390538 catatttcaagacaagttagtagttttaattaagggtatgtttaggaaaaaataataaatgcatctagtaatttaaaaaggggtttacatttagggacaa 51390439  T
Q  277 aaataaa 283  Q
    || ||||    
T  51390438 aattaaa 51390432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 32047381 - 32047465
Alignment:
Q  15 aaagaataatttattcattatgcttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  32047381 aaagaataatttattcattatgctccctccgtcccttaatgtaggcacccattgcttttttcacatttcttaagaaaagttgtca 32047465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 34012589 - 34012697
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||   |||||| ||||  |||||    
T  34012589 catatttcaagacaagatagtagtattaattaagggtatgtttaggaaaaaataataaatgcatctagtaatttaaaaaaaagtttacatttaacgacaa 34012688  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  34012689 aaataaaat 34012697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 5322024 - 5321914
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag--aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||||||||||||||||||||||||| || || |||||||| |  ||||||||||||||| ||| |||||||| ||||||||||||| |||||||||    
T  5322024 catatttcaagacaagatagtagtattaactaggggtatgtttagggaaaaaaataataaatgtatctagtaatttgaaaaggggtttacatttagggac 5321925  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  5321924 aaaaataaaat 5321914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 34696882 - 34696775
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||||||||||| |||||||||||||||| ||| ||||||| ||||||| |||||||| |||| |||||||| ||||||||||||| |||||| |||||    
T  34696882 tatttcaagacaaaatagtagtattaattagggacatgtttaggaaaaaaataataaatacatctagtaatttgaaaaggggtttacatttaggaacaaa 34696783  T
Q  278 aataaaat 285  Q
    ||||||||    
T  34696782 aataaaat 34696775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 36085072 - 36085181
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||| |||||||||| |||||||||||| || |||||||||||||| ||||||||||||||| |||||||| ||||  | ||||| ||||||||||    
T  36085072 catatttcgagacaagataatagtattaattaggggtatgtttaagaaaaaaataataaatgcatctagtaatttgaaaaaagatttacatttagggaca 36085171  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  36085172 aaaataaaat 36085181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 3143505 - 3143615
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttt--aagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||||||||||||||||||||||||| || |||||||  || ||| |||||||||||||||   |||||| ||||||||| ||| |||||||||    
T  3143505 catatttcaagacaagatagtagtattaattaggggtatgtttggaaaaaataataataaatgcatctgataatttgaaaaggggtgtacatttagggac 3143604  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  3143605 aaaaataaaat 3143615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 15512780 - 15512673
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||  |||||| |||||||| || |||||||| ||||| ||||||||||||||| |||||||| |||||| |||||| ||||||||||||    
T  15512780 tatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagtttacatttagggacaaa 15512681  T
Q  278 aataaaat 285  Q
    ||||||||    
T  15512680 aataaaat 15512673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 28948963 - 28948856
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||  |||||| |||||||| || |||||||| ||||| ||||||||||||||| |||||||| |||||| |||||| ||||||||||||    
T  28948963 tatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagtttacatttagggacaaa 28948864  T
Q  278 aataaaat 285  Q
    ||||||||    
T  28948863 aataaaat 28948856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 47643645 - 47643751
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    ||||||||||||| ||||||||||||||| || ||||||| | |||| ||||||||||||||| ||||||||  |||||||||||| |||| ||||||||    
T  47643645 atttcaagacaagttagtagtattaattaagggtatgttttaaaaaataataataaatgcatctagtaatttggaaaggggtttacatttatggacaaaa 47643744  T
Q  279 ataaaat 285  Q
    |||||||    
T  47643745 ataaaat 47643751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 52141175 - 52141067
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||| |||||||| ||||| |||||| || ||||||||||| ||||||| ||||||||||||| ||| |||| |||||| |||||| |||||||||||    
T  52141175 atattttaagacaagttagtaatattaactagggatatgtttaggaaaaaaataataaatgcatctagtgatttgaaaaggagtttacatttagggacaa 52141076  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  52141075 aaataaaat 52141067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 28334222 - 28334112
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||| ||| ||||||||| |||||||||| || |||||||| ||||||  | |||||||||||| |||||||| ||||||||||||| |||||||||    
T  28334222 catattttaaggcaagatagtggtattaattaggggtatgtttaggaaaaataaaaataaatgcatctagtaatttgaaaaggggtttacatttagggac 28334123  T
Q  275 aaaaataaaat 285  Q
    |||| ||||||    
T  28334122 aaaagtaaaat 28334112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 47754021 - 47753931
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaaa-ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    ||||||||||||||| || |||||||| |||||| |||||||||||||| ||||| || |||| |||||||||||||||||||||||||||    
T  47754021 tagtagtattaattaggggtatgtttaggaaaaatataataaatgcatctagtaagttgaaaatgggtttacgtttagggacaaaaataaa 47753931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 33231942 - 33232051
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||||||||||||||||| |||||||||| || |||||||| | ||||||||||||||||||| |||||||| |||| |  ||||  ||||||||||    
T  33231942 catatttcaagacaagatagtggtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaatgaatttatatttagggaca 33232041  T
Q  276 aaaataaaat 285  Q
    ||| ||||||    
T  33232042 aaagtaaaat 33232051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 25269479 - 25269587
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||| || ||||||| |  ||||||||| || ||||||||||||||| ||||||||||||| |||||||| ||||||||||||  |||||| ||||    
T  25269479 catatttcgaggcaagataatgatattaattaggggtatgtttaagaaaaagtaataaatgcatctagtaatttgaaaaggggtttatatttaggaacaa 25269578  T
Q  277 aaataaaat 285  Q
    || ||||||    
T  25269579 aagtaaaat 25269587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 5085228 - 5085169
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  5085228 cctccgtcccttaatgtaggcacccattgcctttttcacattttttaagaaaagttgtca 5085169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 46732961 - 46732855
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||  |||||||| |||||| || |||||||| | |||||||||||||||||| | |||||||||||| || ||||| ||||||||||    
T  46732961 catatttcaagacaaattagtagtaataattaggggtatgtttagggaaaaaataataaatgcatta-gtaatttaaaaaaggatttacatttagggaca 46732863  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  46732862 aaaataaa 46732855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 4817904 - 4817798
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaa-aaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    ||||||||||||| ||||||||||||||| |  |||||||||||| |||||||||||| |||| ||||||||  ||| | |||||| |||| ||||||||    
T  4817904 atttcaagacaagttagtagtattaattaagagtatgtttaagaacaaaataataaatacatctagtaatttggaaatgagtttacatttaaggacaaaa 4817805  T
Q  279 ataaaat 285  Q
    |||||||    
T  4817804 ataaaat 4817798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 4829704 - 4829598
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaa-aaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    ||||||||||||| ||||||||||||||| |  |||||||||||| |||||||||||| |||| ||||||||  ||| | |||||| |||| ||||||||    
T  4829704 atttcaagacaagttagtagtattaattaagagtatgtttaagaacaaaataataaatacatctagtaatttggaaatgagtttacatttaaggacaaaa 4829605  T
Q  279 ataaaat 285  Q
    |||||||    
T  4829604 ataaaat 4829598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 34102472 - 34102573
Alignment:
Q  183 tcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataa 282  Q
    |||||||||| ||||||||||||||| ||  ||||||| |||||||||||||||||||| | |||||| ||||| || |||  |||||||||||||||||    
T  34102472 tcaagacaagttagtagtattaattaagggcatgtttaggaaaaaataataaatgcatctaataatttgaaaagtgg-ttatatttagggacaaaaataa 34102570  T
Q  283 aat 285  Q
    |||    
T  34102571 aat 34102573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 51997066 - 51997167
Alignment:
Q  185 aagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    |||||||| ||||||||||||||| |  |||||||| ||||| ||||||||||||||   ||||||| |||||||| |||| ||||||||||||||||||    
T  51997066 aagacaagttagtagtattaattaagagtatgtttaggaaaaaaataataaatgcatattgtaatttgaaaaggggattacatttagggacaaaaataaa 51997165  T
Q  284 at 285  Q
    ||    
T  51997166 at 51997167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 10160814 - 10160917
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaattt-aaaaaggggtttacgtttagggac 274  Q
    |||||||||||| || ||| |||||||||||| || |||||||| ||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||||    
T  10160814 catatttcaagataatataatagtattaattaggg-tatgtttaggaaaaaaataataaacgcatctagtaatttgaaaaaggggtttacatttagggac 10160912  T
Q  275 aaaaa 279  Q
    |||||    
T  10160913 aaaaa 10160917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 23982593 - 23982505
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttac 264  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||| ||||| ||||||||||| ||| || ||||| |||||||||||||    
T  23982593 catatttcaagataagttagtagtattaattagggatatgtttaggaaaataataataaatgtatctagcaatttgaaaaggggtttac 23982505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 29140655 - 29140549
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||||||||||||| |||||||||| || ||||||| |||| ||| || |||| |||| | |||||||||||||||||||| |||| ||||||    
T  29140655 catatttcaagacaagatagtggtattaattaggggtatgttt-agaagaaa-aaaaaatacatctaataatttaaaaaggggtttacatttaaggacaa 29140558  T
Q  277 aaataaaat 285  Q
    || ||||||    
T  29140557 aagtaaaat 29140549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 46495420 - 46495520
Alignment:
Q  185 aagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaa 284  Q
    |||||||| || |||||||||||| |  |||| ||| ||||||||||||||||||||  |||||||||||| || ||||| |||| ||||||||||||||    
T  46495420 aagacaagttaatagtattaattaagcgtatgcttaggaaaaaataataaatgcatcttgtaatttaaaaaaggatttacatttacggacaaaaataaaa 46495519  T
Q  285 t 285  Q
    |    
T  46495520 t 46495520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 3143367 - 3143426
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  3143367 cctctgtcccttaatgtaggcacccattgcttttttcacatttcttaagaaaagttgtca 3143426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 32152260 - 32152365
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||| |||| ||| ||||||||||||||| || |||||||| |||||||||||||||||||  ||||| || ||||||| ||||| | || ||||||    
T  32152260 catattttaagataagttagtagtattaattaggggtatgtttaggaaaaaataataaatgcatatagtaa-ttcaaaagggatttacatctaaggacaa 32152358  T
Q  277 aaataaa 283  Q
    |||||||    
T  32152359 aaataaa 32152365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 44163326 - 44163431
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| ||||||||||||||| |  | | |||   ||||||||||||||||||| ||||||||  |||||||||||| |||||||| ||    
T  44163326 catatttcaagacaagttagtagtattaattaagagtgtatttggcaaaaaataataaatgcatctagtaattt-gaaaggggtttacatttagggataa 44163424  T
Q  277 aaataaa 283  Q
    |||||||    
T  44163425 aaataaa 44163431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 9684719 - 9684608
Alignment:
Q  177 catatttcaagacaagatagtagtatta---attatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttaggga 273  Q
    ||||||||||||||| ||||| ||||||   |||| || ||| ||| | ||||||||||||||||||| | |||||||||||||||||||| ||||   |    
T  9684719 catatttcaagacaatatagtggtattattaattaggggtatattttaaaaaaaataataaatgcatctaataatttaaaaaggggtttacatttaataa 9684620  T
Q  274 caaaaataaaat 285  Q
    ||||||||||||    
T  9684619 caaaaataaaat 9684608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 15179514 - 15179621
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaa--aaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||| |||||| |||||||| |||||||||||| ||  | ||||||||||||||| | ||||||||||| || ||||| |||| | ||||    
T  15179514 tatttcaagacaagttagtaggattaattagggatatgtttaaaaaatataataataaatgcatctaataatttaaaaa-ggttttacatttatgaacaa 15179612  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  15179613 aaataaaat 15179621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 217 - 285
Target Start/End: Original strand, 49033815 - 49033884
Alignment:
Q  217 tttaagaaaaaataa-taaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||    
T  49033815 tttaggaaaaaataaataaatgcatctagtaatttaaaaaggggtttatgtttagggacaaaagtaaaat 49033884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 25063312 - 25063423
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaat--gcatcaagtaatttaaaaaggggtttacgtttaggga 273  Q
    ||||||||| |||||| |||||| |||||||| || |||||||| ||||||| ||||||||  | ||| |||||||| |||||| |||||| |||| |||    
T  25063312 catatttcacgacaagttagtaggattaattaggggtatgtttaggaaaaaaataataaatatgtatctagtaatttgaaaaggagtttacatttaagga 25063411  T
Q  274 caaaaataaaat 285  Q
    ||||||||||||    
T  25063412 caaaaataaaat 25063423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 48722008 - 48721948
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcct-ttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||    
T  48722008 cctccgtcccttaatgtaggcacccattgccttttttcacatttcttaagaaaagctgtca 48721948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 29302480 - 29302381
Alignment:
Q  187 gacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    |||||||||||| |||||| ||||| |||||||| ||||||| ||||||||||||| |||||||| ||||| | ||||  |||| |||||||||| ||||    
T  29302480 gacaagatagtaatattaaatatgggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaagagatttatatttaaggacaaaaattaaat 29302381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 33231804 - 33231863
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||  |||||||||||    
T  33231804 cctccgtcccttaatgtagccatccattgcctttttcacatttcttaaaaaaagttgtca 33231863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 4813463 - 4813362
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa--taataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||| | ||| |||  |||||||||| | ||||||||| |||||||  ||||||||||||| |||||||| ||||||||||||  |||||||||    
T  4813463 catatttcaaaataagttagccgtattaattaggaatatgtttaggaaaaaaaataataaatgcatctagtaatttgaaaaggggtttatatttagggac 4813364  T
Q  275 aa 276  Q
    ||    
T  4813363 aa 4813362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 8877875 - 8877953
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaa 255  Q
    ||||||||||| ||||||||||||||||||| || ||||||||   ||||||||||||||||||| |||||||| ||||    
T  8877875 atatttcaagataagatagtagtattaattaggggtatgtttattaaaaaaataataaatgcatctagtaatttgaaaa 8877953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 15911553 - 15911467
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggttta 263  Q
    |||||||||||||||| ||||| |||||||||  | ||||||||  ||||||||||| ||||||| | |||||| ||||||||||||    
T  15911553 catatttcaagacaagttagtaatattaattaaaggtatgtttagaaaaaaataatacatgcatctaataatttgaaaaggggttta 15911467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 28723651 - 28723542
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||||||||||| | ||| ||||||||| || |||||||| ||||||  ||||||| |||||| |||||||| |||||  |||||  |||| |||||    
T  28723651 atatttcaagacaagttggtaatattaattaggggtatgtttaggaaaaataataataactgcatctagtaatttgaaaagatgtttatatttaaggaca 28723552  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  28723551 aaaataaaat 28723542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 29302591 - 29302529
Alignment:
Q  37 cttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||| | ||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  29302591 cttcctccgacgcttaatgtaggcatccattccctttttcacatttcttaagaaaagttgtca 29302529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 177 - 254
Target Start/End: Complemental strand, 44652862 - 44652784
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaa 254  Q
    |||||||||| ||||| ||||||||||||||| || |||||||| | ||||||||||||||||||| | ||||||||||    
T  44652862 catatttcaaaacaagttagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctaataatttaaaa 44652784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 9675804 - 9675747
Alignment:
Q  42 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||||||||||||||| |||||| || ||||||| ||||||||||||    
T  9675804 tccgtcccttaatgtaggcacccattgacttttttacgtttcttaagaaaagttgtca 9675747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 30898564 - 30898455
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||| |||| ||| |||||| ||||| || || |||||||| ||||||| ||||||||| |||  ||||||| |||| |||||||| |||||| |||    
T  30898564 catattttaagataagttagtagcattaaataggggtatgtttaggaaaaaaataataaatgtatctggtaatttgaaaaagggtttacatttaggaaca 30898465  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  30898464 aaaataaaat 30898455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 311
Target Start/End: Original strand, 32715918 - 32716038
Alignment:
Q  200 tattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaa---------tgctt 289  Q
    ||||||||| || |||||||| ||||| ||||||||| ||||| |||||||| |||| |||||||| ||||| |||||||||||||         |||||    
T  32715918 tattaattaggggtatgtttatgaaaaaaataataaacgcatctagtaatttgaaaa-gggtttacatttagagacaaaaataaaatcaaatgggtgctt 32716016  T
Q  290 agatatagggacggagggagta 311  Q
    ||||||||||||||||||||||    
T  32716017 agatatagggacggagggagta 32716038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 35001407 - 35001350
Alignment:
Q  42 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||    
T  35001407 tccgtcccttaatctaggcacccattgtctttttcacatttattaagaaaagttgtca 35001350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 35365985 - 35365876
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa----aataataaatgcatcaagtaatttaaaaaggggtttacgtttaggg 272  Q
    ||||||| |||||||| ||  |||||||||||  | |||||||| |||||    ||||||||||||||| |||||||| |||| |||||| |||||||||    
T  35365985 catattttaagacaagttaacagtattaattaaaggtatgttta-gaaaataataataataaatgcatctagtaatttgaaaatgggtttgcgtttaggg 35365887  T
Q  273 acaaaaataaa 283  Q
    |||||||||||    
T  35365886 acaaaaataaa 35365876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 5852687 - 5852596
Alignment:
Q  195 agtagtattaa-ttatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||||| |||  |||||||||| |||||||||||||||||||| |||||||| ||||| | ||||| |||| | | |||||||||||    
T  5852687 agtagtattaaattagagatatgtttaggaaaaaataataaatgcatctagtaatttgaaaagagttttacatttaagaataaaaataaaat 5852596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 3072239 - 3072345
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| |||||||||||||||  | ||||||||  ||||||||||||||| ||| | ||||||  |||   | |||| |||||| ||||    
T  3072239 catatttcaagacaagttagtagtattaattagaggtatgtttagaaaaaaataataaatgtatctactaatttgtaaataaggttacatttaggaacaa 3072338  T
Q  277 aaataaa 283  Q
    |||||||    
T  3072339 aaataaa 3072345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 7957673 - 7957581
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaaaat---aataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    ||||||||||||||| || |||||||| |||||||    |||||||||||| |||||||| || |||||||||| |||| | |||||||||||    
T  7957673 tagtagtattaattaagggtatgtttaggaaaaaaataaaataaatgcatctagtaatttgaagaggggtttacatttaagaacaaaaataaa 7957581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 29140803 - 29140737
Alignment:
Q  30 cattatgcttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttg 96  Q
    |||||| || ||||||||| ||||||||| || | |||||||||||||||||||||| |||||||||    
T  29140803 cattatactccctccgtcctttaatgtagtcatctattgcctttttcacatttcttaagaaaagttg 29140737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 30336161 - 30336226
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttt--aagaaaaaataataaatgcat 240  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||  || ||||||||||||||||||    
T  30336161 catatttcaagataagttagtagtattaattagggatatgtttagaaaaaaaaataataaatgcat 30336226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 12844097 - 12844036
Alignment:
Q  223 aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaa 284  Q
    |||||||||| ||||| |   ||||||||||||||||||||| |||||||||||||||||||    
T  12844097 aaaaaataattaatgcgtgttgtaatttaaaaaggggtttacatttagggacaaaaataaaa 12844036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 9380762 - 9380663
Alignment:
Q  177 catatttcaagacaa-gatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| || | ||||||| |||||||  | |||||| ||| |||||||||||||||||| |||||||| || | |||||||| ||||||||||    
T  9380762 catatttcaagataaagttagtagtcttaattaaaggtatgtt-aaggaaaaataataaatgcatctagtaatttgaatatgggtttacatttagggaca 9380664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 13698933 - 13699013
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaag 256  Q
    ||||||| |||| ||| |||||||||||||||| | ||||||||  |||||||||||||||||| | |||||||| |||||    
T  13698933 catattttaagataagttagtagtattaattataggtatgtttagggaaaaaataataaatgcaactagtaatttgaaaag 13699013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 25258437 - 25258541
Alignment:
Q  181 tttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaat 280  Q
    |||||| ||||  ||||||||||||||| |  ||||||||  |||||||||||||||||||  ||||||| |||| |  ||||| |||| | ||||||||    
T  25258437 tttcaaaacaatttagtagtattaattaggagtatgtttagaaaaaaataataaatgcatcttgtaatttgaaaatgaatttacatttaagaacaaaaat 25258536  T
Q  281 aaaat 285  Q
    |||||    
T  25258537 aaaat 25258541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 4082028 - 4082107
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaa 255  Q
    ||||||| |||||||| ||||| ||||||||| ||||||||||| ||||| ||||| ||||||||  |||||||| ||||    
T  4082028 catatttaaagacaagttagtattattaattagggatatgtttaggaaaataataacaaatgcatttagtaatttgaaaa 4082107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 5322162 - 5322107
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagtt 95  Q
    |||||||||||||||||||||| | ||||||||||||| |||| ||| ||||||||    
T  5322162 cctccgtcccttaatgtaggcatctattgcctttttcatattttttaagaaaagtt 5322107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 10160683 - 10160738
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagtt 95  Q
    ||||| ||||||||| |||||| || ||||||||||||||||||||| ||||||||    
T  10160683 cctccatcccttaatataggcatccgttgcctttttcacatttcttaagaaaagtt 10160738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 16582505 - 16582556
Alignment:
Q  48 ccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||| || |||||| ||||||||||||||||| ||||||||||||    
T  16582505 ccttaatgtagccatccattgtctttttcacatttcttaagaaaagttgtca 16582556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 34697022 - 34696963
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||||||| | ||| || ||||||||||||| ||| ||||||||||||    
T  34697022 cctccgtcccttaatgtagggatccactgtctttttcacattttttaagaaaagttgtca 34696963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 28334340 - 28334295
Alignment:
Q  54 tgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  28334340 tgtagtcacccattgtctttttcacatttcttaagaaaagttgtca 28334295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 30336028 - 30336081
Alignment:
Q  45 gtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtc 98  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| |||||||||||    
T  30336028 gtcccataatgtagacactcattgcttttttcacatttcttaagaaaagttgtc 30336081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 17426709 - 17426653
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaattt 250  Q
    |||| |||||||||| |||||| |||| |||||||||||||||||||| | ||||||    
T  17426709 tagttgtattaattagggatatatttaggaaaaaataataaatgcatctaataattt 17426653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 254
Target Start/End: Original strand, 32144413 - 32144492
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta--agaaaaaataataaatgcatcaagtaatttaaaa 254  Q
    ||||||| |||||||| || || ||||||||| |||||||||||  | ||||||||||||||||||  ||||||| ||||    
T  32144413 catattttaagacaagttaataatattaattagggatatgtttaggaaaaaaaataataaatgcatatagtaattcaaaa 32144492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 37733749 - 37733694
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataa 234  Q
    ||||||||||||||| |||||||||||||||  ||||| ||| ||||||||||||||    
T  37733749 atatttcaagacaagttagtagtattaattaaagatatattt-agaaaaaataataa 37733694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 16582635 - 16582746
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa----aataataaatgcatcaagtaatttaaaaaggggtttacgtttaggg 272  Q
    |||||||||||||||||||||  ||||||||| || | |||||| |||||    ||||||||||||||| |||||||| |||||   ||||  ||||||     
T  16582635 catatttcaagacaagatagtgatattaatta-gggtgtgtttaggaaaataataataataaatgcatctagtaatttgaaaagaaatttatatttagga 16582733  T
Q  273 acaaaaataaaat 285  Q
    |||||| ||||||    
T  16582734 acaaaagtaaaat 16582746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 20564877 - 20564958
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataat---aaatgcatcaagtaatttaaaaa 255  Q
    |||||||||||||||| |||||||||||||||    |||||||| | |||||||||   ||||||||| |||||||| ||||    
T  20564877 catatttcaagacaagttagtagtattaattagatgtatgtttagggaaaaataataacaaatgcatctagtaatttgaaaa 20564958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 41737241 - 41737316
Alignment:
Q  245 taatttaaaaaggggtttacgtttagggacaaaaataa---------aatgcttagatatagggacggagggagta 311  Q
    |||||| |||| ||||||||||||||||||||||||||         ||| |||||||||||||||||||||||||    
T  41737241 taatttgaaaatgggtttacgtttagggacaaaaataacgttaaatgaatacttagatatagggacggagggagta 41737316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 44395637 - 44395749
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta----agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttaggg 272  Q
    |||||||||||||| | || ||||||||||||  ||||| ||||    | ||||||||||||||||||  | |||||||||||| | ||||  |||| ||    
T  44395637 catatttcaagacatgttaatagtattaattagagatatatttagaaaaaaaaaaataataaatgcatttaataatttaaaaagagatttatatttaagg 44395736  T
Q  273 acaaaaataaaat 285  Q
    | |||||||||||    
T  44395737 ataaaaataaaat 44395749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 8877737 - 8877795
Alignment:
Q  41 ctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||| ||||||||| ||| |||||||||||||| |||| ||| ||||| ||||||    
T  8877737 ctccgtcctttaatgtagacactcattgcctttttcatattttttaagaaaaattgtca 8877795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 12845125 - 12845067
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtc 98  Q
    ||||||||||||||| ||  | |||||||| |||||||||||||||| |||| ||||||    
T  12845125 cctccgtcccttaatataaccccccattgcatttttcacatttcttaagaaatgttgtc 12845067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 44335403 - 44335445
Alignment:
Q  185 aagacaagatagtagtattaattatggatatgtttaagaaaaa 227  Q
    |||||||| ||||||||||||||| |||||||||||| |||||    
T  44335403 aagacaagttagtagtattaattaaggatatgtttaaaaaaaa 44335445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 47643508 - 47643565
Alignment:
Q  41 ctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||||  | ||| |||| |||||||||||||||| ||||||||||||    
T  47643508 ctccgtcccttaatgtaaactccctttgc-tttttcacatttcttaagaaaagttgtca 47643565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 2343006 - 2343111
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||| |||| ||||||||||||||| || |||||||| ||| ||  || ||||| ||| | |||||| |||||||  |||| |||||||| ||    
T  2343006 catatttcaaggcaagttagtagtattaatta-gggtatgtttatgaagaa--aaaaaatgtatctaataatttgaaaagggacttacatttagggataa 2343102  T
Q  277 aaataaaat 285  Q
    ||| |||||    
T  2343103 aaagaaaat 2343111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 3831015 - 3831068
Alignment:
Q  42 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagtt 95  Q
    ||||||||||||||||  |||| ||||| |||||||||||| ||| ||||||||    
T  3831015 tccgtcccttaatgtaaacacctattgcatttttcacattttttaagaaaagtt 3831068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 13723617 - 13723560
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    ||||| || ||| ||||| |||||| |||| |||||||||||||||| ||||||||||    
T  13723617 cctccatctctttatgtaagcaccctttgcatttttcacatttcttaagaaaagttgt 13723560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 25269343 - 25269400
Alignment:
Q  42 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||| |||||||| | || |||||| ||||||||||||| ||| ||||||||||||    
T  25269343 tccgtctcttaatgttgccatccattgtctttttcacattttttaagaaaagttgtca 25269400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 27531201 - 27531250
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa 226  Q
    |||||||||||| ||| ||||| |||||||||||  ||||||||||||||    
T  27531201 catatttcaagataagttagtaatattaattatgagtatgtttaagaaaa 27531250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 32321952 - 32321896
Alignment:
Q  193 atagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaattt 250  Q
    |||| ||||||||||| || | ||||||||||||||||||||||||||  ||||||||    
T  32321952 atagcagtattaattaagg-tgtgtttaagaaaaaataataaatgcatatagtaattt 32321896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 8984662 - 8984583
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa-ataataaatgcatcaagtaatttaaaaag 256  Q
    |||||||||||| ||  ||||||||||||||| || || ||||| |||||| | |||||||||||| |||||||| |||||    
T  8984662 catatttcaagataaattagtagtattaatta-gggtaagtttaggaaaaataaaataaatgcatctagtaatttgaaaag 8984583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 211 - 239
Target Start/End: Original strand, 9094701 - 9094729
Alignment:
Q  211 gatatgtttaagaaaaaataataaatgca 239  Q
    |||||||||||||||||||||||||||||    
T  9094701 gatatgtttaagaaaaaataataaatgca 9094729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 13723419 - 13723383
Alignment:
Q  227 aataataaatgcatcaagtaatttaaaaaggggttta 263  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  13723419 aataataaatgcatctagtaatttgaaaaggggttta 13723383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 23393233 - 23393146
Alignment:
Q  200 tattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    |||||||||||||||| ||||  |||||  |||||||||||||| | ||||||||||||   ||||| || | | |||||||||||||    
T  23393233 tattaattatggatatatttagaaaaaataataataaatgcatctaataatttaaaaagaaatttacattcaagaacaaaaataaaat 23393146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 24415142 - 24415198
Alignment:
Q  227 aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    ||||||||||||||| |||||||||||| ||| ||||  |||| ||| |||||||||    
T  24415142 aataataaatgcatctagtaatttaaaaggggatttatatttaaggataaaaataaa 24415198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 36084938 - 36084986
Alignment:
Q  44 cgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaa 92  Q
    ||||||||||||||||||  ||||| ||||||||||||| ||| |||||    
T  36084938 cgtcccttaatgtaggcaatcattgtctttttcacattttttaagaaaa 36084986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 4089502 - 4089394
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||| |||| | |||||| |||||||||||    
T  4089502 catatttcaagacaagatagtagtattaattaggggtatgtttaggaaaaaataataaatgcatctagtaattttaaaaagagtttacatttagggacaa 4089403  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  4089402 aaataaaat 4089394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 177 - 313
Target Start/End: Original strand, 1324811 - 1324956
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| ||||||||||||||| || |||||||| ||||||||||||||| |||| |||||||| ||| ||||||||| |||||||||||    
T  1324811 catatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaaataataaattcatctagtaatttgaaagggggtttacatttagggacaa 1324910  T
Q  277 aaataaaat---------gcttagatatagggacggagggagtaca 313  Q
    |||||||||         |||||||||||||||| |||||||||||    
T  1324911 aaataaaataaaatgggggcttagatatagggacagagggagtaca 1324956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 10685188 - 10685296
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||||||| |||||| |||||||||||| || |||||  ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  10685188 catatttcaagacaaaatagtaatattaattatgggtacgtttagaaaaaaataataaatgcatctagtaatttgaaaaggggtttacatttagggacaa 10685287  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  10685288 aaataaaat 10685296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 35128487 - 35128597
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa--aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||||||||||||||  |||||||||||| || ||||||||||||||  ||||||||||||||| |||||||| ||||| ||||||| |||||||||    
T  35128487 catatttcaagacaagatgatagtattaattaggggtatgtttaagaaaaaaaataataaatgcatctagtaatttgaaaagaggtttacatttagggac 35128586  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  35128587 aaaaataaaat 35128597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 48767668 - 48767812
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataa-taaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||| | || |||||||||||| || |||||||| |||||||||| |||||||||| |||||||| ||| ||||||||| ||||||||||    
T  48767668 catatttcaagacatgttattagtattaattaggggtatgtttaggaaaaaataaataaatgcatctagtaatttgaaagggggtttacatttagggaca 48767767  T
Q  276 aaaataaaat---------gcttagatatagggacggagggagta 311  Q
    ||||||||||         ||||||||||||||||||||||||||    
T  48767768 aaaataaaatcaaatgggggcttagatatagggacggagggagta 48767812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 18122044 - 18121939
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||| ||| |||||||||||||||    |||||||| |||||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  18122044 catatttcaagataagttagtagtattaattagacgtatgtttaggaaaaaataataaatgcatctagtaatttaaaaa-gggtttacatttagggacaa 18121946  T
Q  277 aaataaa 283  Q
    |||||||    
T  18121945 aaataaa 18121939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 37673840 - 37673949
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||||||||||||||| || ||||||||| ||  ||||||||||||| |||||||||| |||| ||||||||||||||| |||||| ||||| ||||    
T  37673840 catatttcaagacaagataataatattaattaggggcatgtttaagaaaaaaataataaatacatctagtaatttaaaaaggagtttacatttagagaca 37673939  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  37673940 aaaataaaat 37673949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 48610138 - 48610031
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||||||||||||| |||||||||| |||||||||||  ||||||||||||||||||| |||||||| |||| || ||||| ||||  |||||    
T  48610138 catatttcaagacaagatagtggtattaattagggatatgtttagaaaaaaataataaatgcatctagtaatttgaaaa-ggatttacatttaaagacaa 48610040  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  48610039 aaataaaat 48610031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 19236069 - 19235960
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa--aataa-taaatgcatcaagtaatttaaaaaggggtttacgtttaggga 273  Q
    |||||||||||||||| ||||||||||||||| || |||||||| |||||  ||||| |||||||||| |||||||| |||||| |||||| ||||||||    
T  19236069 catatttcaagacaagttagtagtattaattaggggtatgtttaggaaaataaataaataaatgcatctagtaatttgaaaaggagtttacatttaggga 19235970  T
Q  274 caaaaataaa 283  Q
    ||||||||||    
T  19235969 caaaaataaa 19235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 29723564 - 29723672
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||| |||||||||||||||||||||    ||| ||||||||||||||||||||||||| ||||||||||||| || ||||  ||||  |||||    
T  29723564 catatttcaacacaagatagtagtattaattagaagtatatttaagaaaaaataataaatgcatctagtaatttaaaaatggatttatatttaaagacaa 29723663  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  29723664 aaataaaat 29723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 47458187 - 47458080
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||||||| ||| |||||| || |||||||| | ||||||||||||||||||  |||||||||||||||  ||||| |||||||||||    
T  47458187 atatttcaagacaagatagtggtactaattaggg-tatgtttagggaaaaaataataaatgcatttagtaatttaaaaaggaatttacatttagggacaa 47458089  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  47458088 aaataaaat 47458080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 29636043 - 29635936
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| |||||||| || ||| |||| |||||| ||||||| ||||||||||||| | |||||| |||| || ||||| ||||||||||    
T  29636043 catatttcaagacaagttagtagtactacttagggatctgtttaggaaaaaaataataaatgcatctaataatttgaaaatggatttacatttagggaca 29635944  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  29635943 aaaataaa 29635936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 40741055 - 40741154
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||| ||| ||| ||||||||||| || |||||||| ||||||||||||||||| || |||||||| ||||||||||||  |||||| ||||    
T  40741055 catatttcaagataagttagcagtattaattaggggtatgtttaggaaaaaataataaatgcgtctagtaattttaaaaggggtttatatttaggaacaa 40741154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 21388348 - 21388454
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    |||| |||| ||| |||||||||||||||  | |||||||| ||||| ||||||||||||||| ||||||||  |||||||||||| ||||| |||||||    
T  21388348 attttaagataagttagtagtattaattaatggtatgtttaggaaaaaaataataaatgcatctagtaatttggaaaggggtttacatttagagacaaaa 21388447  T
Q  279 ataaaat 285  Q
    |||||||    
T  21388448 ataaaat 21388454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 21759825 - 21759932
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||  |||||| |||||||| || |||||||| ||||||| ||||||||||||| |||||||| |||  | |||||| ||||||||||||    
T  21759825 tatttcaagacaaattagtaggattaattacgggtatgtttaggaaaaaagtaataaatgcatctagtaatttgaaatagagtttacatttagggacaaa 21759924  T
Q  278 aataaaat 285  Q
     |||||||    
T  21759925 cataaaat 21759932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 26632951 - 26633058
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||  |||||| |||||||| || |||||||| ||||  ||||||||||||||| |||||||| |||||  || ||| ||||||||||||    
T  26632951 tatttcaagacaaattagtaggattaattaggggtatgtttaggaaagtaataataaatgcatctagtaatttgaaaagaagtctacatttagggacaaa 26633050  T
Q  278 aataaaat 285  Q
    ||||||||    
T  26633051 aataaaat 26633058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 40263814 - 40263924
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta--agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||||| ||||||||||||||||||| || ||||||||  | ||||||||||||||  ||| | |||||||||||| | ||| | ||||||||     
T  40263814 catatttcaagataagatagtagtattaattagggctatgtttatgaaaaaaaataataaatatatctaataatttaaaaagtgatttgcatttagggat 40263913  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  40263914 aaaaataaaat 40263924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 200 - 283
Target Start/End: Complemental strand, 5333879 - 5333794
Alignment:
Q  200 tattaattatggatatgtttaagaaaaaata--ataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    ||||||||| || |||||||| ||||||| |  |||||| |||| |||||||||||||||||||||| ||||||||||||||||||    
T  5333879 tattaattaggggtatgtttaggaaaaaaaattataaatacatctagtaatttaaaaaggggtttacatttagggacaaaaataaa 5333794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 28663858 - 28663936
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaa 255  Q
    |||||||||||| ||  ||||||||||||||| || |||||||| |||||||| ||||||||||| |||||||||||||    
T  28663858 catatttcaagataaattagtagtattaattaggggtatgtttaggaaaaaatcataaatgcatctagtaatttaaaaa 28663936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 36726176 - 36726065
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa---taataaatgcatcaagtaatttaaaaaggggtttacgtttaggga 273  Q
    |||||||||| ||||| | ||||||||||||| || || ||||| |||||||   ||||||||||||| |||||||| |||  |||||||| ||||| ||    
T  36726176 catatttcaaaacaagttggtagtattaattaggggtaagtttaggaaaaaaaaataataaatgcatctagtaatttgaaagtgggtttacatttagaga 36726077  T
Q  274 caaaaataaaat 285  Q
    ||||||||||||    
T  36726076 caaaaataaaat 36726065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 4089640 - 4089581
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  4089640 cctccttcccttaatgtaggcatccattgactttttcacatttcttaagaaaagttgtca 4089581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 21809649 - 21809574
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa-ataataaatgcatcaagtaattta 251  Q
    |||||||||| ||||| ||||||||||||||| || ||||||||||||||| | |||||||||||| |||||||||    
T  21809649 catatttcaaaacaagttagtagtattaattaggggtatgtttaagaaaaataaaataaatgcatctagtaattta 21809574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 27170114 - 27170213
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||  || ||||||||||||||  |||||||| ||||||||||||||| |||| ||| ||||||| | | |||||  |||||||||||    
T  27170114 catatttcaagacaaattaatagtattaattatgagtatgtttatgaaaaaataataaatacatctagtcatttaaagatgagtttatatttagggacaa 27170213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 28038890 - 28038816
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa-ataataaatgcatcaagtaattt 250  Q
    |||||||||||||||| ||| ||||||||||||| ||||||||| |||||| ||||||||| |||| ||||||||    
T  28038890 catatttcaagacaagttagcagtattaattatgaatatgtttaggaaaaacataataaatacatctagtaattt 28038816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 33181406 - 33181503
Alignment:
Q  185 aagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    |||||||| ||||| ||||||||| |  |||||||||||||||| ||||||||||||| | |||||| |||  |||||||| |||| |||||||||||||    
T  33181406 aagacaagttagtaatattaattaggagtatgtttaagaaaaaattaataaatgcatctaataatttgaaa--gggtttacatttatggacaaaaataaa 33181503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 49100774 - 49100887
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa----aataataaatgcatcaagtaatttaaaaa-ggggtttacgtttagg 271  Q
    |||||||||||| || ||| || ||||||||| || |||||||| |||||    || |||||||||||  ||||||||||||| |||||||||  |||||    
T  49100774 catatttcaagataaaataataatattaattaggggtatgtttaggaaaaaaataaaaataaatgcatatagtaatttaaaaagggggtttacaattagg 49100873  T
Q  272 gacaaaaataaaat 285  Q
    ||||||||||||||    
T  49100874 gacaaaaataaaat 49100887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 282
Target Start/End: Original strand, 8318689 - 8318740
Alignment:
Q  231 ataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataa 282  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||||||||||    
T  8318689 ataaatgcatctagtaatttgaaaaggggtttacatttagggacaaaaataa 8318740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 29723426 - 29723473
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttag 87  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  29723426 cctccgtcccttaatgtaggcacccattgtctttttcacattttttag 29723473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 48767533 - 48767588
Alignment:
Q  44 cgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||  ||| |||||||    
T  48767533 cgtcccttaatgtaggcacccattgcttttttcacatttcttaaaaaacgttgtca 48767588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 2276576 - 2276472
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaa 279  Q
    ||||||||| ||| || |||||||||||| || |||||||| ||| ||| || |||||  || |||||||| ||||| | ||||| ||||||||||||||    
T  2276576 atttcaagataagttactagtattaattaagggtatgtttaggaagaaaaaa-aaatgtgtctagtaatttgaaaagcgatttacatttagggacaaaaa 2276478  T
Q  280 taaaat 285  Q
    ||||||    
T  2276477 taaaat 2276472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 98
Target Start/End: Original strand, 36116287 - 36116344
Alignment:
Q  41 ctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtc 98  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||| |||| ||||||    
T  36116287 ctccgtcccttaatgtaggcattcattgtctttttcacatttcttaagaaatgttgtc 36116344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 36726316 - 36726267
Alignment:
Q  37 cttcctccgtcccttaatgtaggcacccattgcctttttcacatttctta 86  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| |||||    
T  36726316 cttcctccgtcccttaatgtaggcatccattgcctttttcgcatctctta 36726267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 285
Target Start/End: Original strand, 36116425 - 36116529
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||||||| || |||||||||  | ||| || |||||||||  ||||| ||||| |||||||||||||| | |||||  |||| ||||||    
T  36116425 atatttcaagacaagataataatattaattagaggtatctt-aagaaaaaa--ataaacgcatctagtaatttaaaaagagatttacaattagagacaaa 36116521  T
Q  278 aataaaat 285  Q
    ||||||||    
T  36116522 aataaaat 36116529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 37673707 - 37673759
Alignment:
Q  45 gtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    |||||||||||||| ||||||||| ||||||||||||||||| |||| |||||    
T  37673707 gtcccttaatgtagacacccattgtctttttcacatttcttaagaaatgttgt 37673759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 20123562 - 20123657
Alignment:
Q  185 aagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaa 284  Q
    |||||||| || |||||||||||| | ||||| ||| |||||||    |||||||||  ||||||| ||| ||||||||| |||||||||||||||||||    
T  20123562 aagacaagttattagtattaattaagtatatgcttaggaaaaaa----aaatgcatcttgtaatttgaaa-ggggtttacatttagggacaaaaataaaa 20123656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 27162905 - 27162818
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggttta 263  Q
    |||||||||||||||| || ||||||||||||    |||||||| ||||||| ||||||||||||  |||||||| |||||| |||||    
T  27162905 catatttcaagacaagttaatagtattaattagaagtatgtttaggaaaaaaataataaatgcatttagtaatttgaaaaggtgttta 27162818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 35960481 - 35960560
Alignment:
Q  177 catatttcaagacaagatagta-gtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaa 255  Q
    |||||||||||||| | ||||  |||||||||| || |||||||| |||||||||||||||||||| | |||| ||||||    
T  35960481 catatttcaagacaggttagtgtgtattaattaggggtatgtttatgaaaaaataataaatgcatctactaatctaaaaa 35960560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 17772485 - 17772443
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaaaataataaat 236  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  17772485 tagtagtattaattaaggatatgattaagaaaaaataataaat 17772443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 29993136 - 29993197
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaa 255  Q
    |||||||||||||||  | |||||||| |||| ||||||||||||||| |||| ||||||||    
T  29993136 tagtagtattaattagtggtatgtttaggaaataataataaatgcatctagtattttaaaaa 29993197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 285
Target Start/End: Complemental strand, 31365807 - 31365717
Alignment:
Q  194 tagtagtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||||||||| || |||||||| |||||||||  |||||||||| | |||||| |||| | |||||| ||||  ||||||||||||||    
T  31365807 tagtagtattaattaggggtatgtttagagaaaaaat--taaatgcatctaataatttgaaaaagagtttacatttacagacaaaaataaaat 31365717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 42983616 - 42983507
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| |||||||||||||||  | |||||||| ||||| ||||||||||  ||| |  ||||| |||| | |||||  ||||  ||||    
T  42983616 catatttcaagacaagttagtagtattaattaatggtatgtttaggaaaataataataaatagatctaacaatttgaaaatgagtttatatttaaagaca 42983517  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  42983516 aaaataaaat 42983507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 13907745 - 13907673
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaat 248  Q
    ||||||| |||||||| ||||||||||||||| || | |||||| ||||||| |||||||| |||| ||||||    
T  13907745 catatttaaagacaagttagtagtattaattaggggtgtgtttaggaaaaaattaataaatacatctagtaat 13907673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 34118160 - 34118220
Alignment:
Q  223 aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    |||||||||||| |||||| |||||||||||||   |||||| ||||| ||||||||||||    
T  34118160 aaaaaataataactgcatctagtaatttaaaaaaaagtttacatttagagacaaaaataaa 34118220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 40211149 - 40211086
Alignment:
Q  200 tattaattatggatatgtttaagaaaaaa--taataaatgcatcaagtaatttaaaaaggggtt 261  Q
    ||||||||| ||||||||||| |||||||  |||||||| |||| |||||||| ||||||||||    
T  40211149 tattaattagggatatgtttaggaaaaaaaataataaatacatctagtaatttgaaaaggggtt 40211086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 1324673 - 1324724
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaa 91  Q
    |||| |||||||||||||  ||| ||||||||||||||||||||||| ||||    
T  1324673 cctctgtcccttaatgtatccactcattgcctttttcacatttcttaagaaa 1324724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 10408570 - 10408507
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa-ataataaatgca 239  Q
    ||||||||||  |||| ||||||||||||||| || |||||||| |||||| ||||||||||||    
T  10408570 catatttcaatgcaagttagtagtattaattaggggtatgtttatgaaaaatataataaatgca 10408507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 37048138 - 37048215
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaag 256  Q
    |||||||||| ||||| ||||||||||||||| || ||||||| ||||| || || ||||||||| |||||||| |||||    
T  37048138 catatttcaatacaagttagtagtattaatta-gggtatgttt-agaaagaaaaaaaaatgcatctagtaatttgaaaag 37048215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 41672519 - 41672461
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaaaa--taataaatgcatcaagtaattt 250  Q
    ||||||||||||||| || |||||||| |||||||  ||||||||||||| ||||||||    
T  41672519 tagtagtattaattaggggtatgtttaggaaaaaaaataataaatgcatctagtaattt 41672461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 49100636 - 49100695
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||| |||||||||||||| ||||||||||||||||| ||| |||||  | |||||||||    
T  49100636 cctctgtcccttaatgtagccacccattgcctttttcgcatctcttaaaataagttgtca 49100695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 18122179 - 18122125
Alignment:
Q  43 ccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    ||||| |||||||||  || |||||| ||||||||||||||||| ||||||||||    
T  18122179 ccgtctcttaatgtatacatccattgtctttttcacatttcttaagaaaagttgt 18122125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 20123412 - 20123474
Alignment:
Q  37 cttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||  |||||  | ||| |||| |||||||||||||||| ||||||||||||    
T  20123412 cttcctccgtccctatatgtaaactccctttgcttttttcacatttcttaagaaaagttgtca 20123474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 21801038 - 21800949
Alignment:
Q  197 tagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaatg 286  Q
    |||||||||||| |  |||||||||||||| |||| |||||||||| ||||||||| |||  | ||||  ||||| |||||||||||||||    
T  21801038 tagtattaattaggagtatgtttaagaaaataatattaaatgcatctagtaatttagaaa-agatttatatttagagacaaaaataaaatg 21800949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 23876142 - 23876220
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaag 256  Q
    |||||||||||||  |||||  ||||||||  | |||||||| ||||| ||||||||||||||| | ||||||||||||    
T  23876142 tatttcaagacaaattagtatgattaattagtggtatgtttaggaaaataataataaatgcatctaataatttaaaaag 23876220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 35128353 - 35128408
Alignment:
Q  42 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||| ||||| |||| ||||||||||||  ||| ||||||||||||    
T  35128353 tccgtcccttaatgtaagcacctattgtctttttcacatt--ttaagaaaagttgtca 35128408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 19477211 - 19477154
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataa 234  Q
    |||||||||||| ||  ||||||||||||||| |||||| |||| ||||||| |||||    
T  19477211 catatttcaagataaattagtagtattaattagggatatatttaggaaaaaacaataa 19477154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 20124153 - 20124210
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    |||||||||||||||||| || ||  |||| |||||||||||| ||| ||||||||||    
T  20124153 cctccgtcccttaatgtaagccccttttgcttttttcacattttttaagaaaagttgt 20124210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 25750471 - 25750538
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttt--aagaaaaaa--taataaatgcat 240  Q
    |||||||||||||||| ||||| ||||||||| || |||||||  |||||||||  ||||||||||||    
T  25750471 catatttcaagacaaggtagtaatattaattaggggtatgtttagaagaaaaaaagtaataaatgcat 25750538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 27213590 - 27213665
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa--aataataaatgcatcaagtaattt 250  Q
    |||||||||||||||| || ||||||| |||| |  |||  |||||||||  ||||||||||||||| ||||||||    
T  27213590 catatttcaagacaagttaatagtatttattaggagtattcttaagaaaaaaaataataaatgcatctagtaattt 27213665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 33181117 - 33181157
Alignment:
Q  37 cttcctccgtcccttaatgtaggcacccattgcctttttca 77  Q
    ||||||||||| |||||||||||||| |||||| |||||||    
T  33181117 cttcctccgtctcttaatgtaggcactcattgcatttttca 33181157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 57191 - 57082
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||||||||||||||| |||||||||||| || |||||||| ||||||| ||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  57191 catatttcaagacaagataatagtattaattaagggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaaggggtttacatttagggaca 57092  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  57091 aaaataaaat 57082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 38761361 - 38761250
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta--agaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttaggga 273  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||||||| |||||||| ||||||||||||| | ||||||    
T  38761361 catatttcaagacaagatagtagtattaattagggatatgtttagaagaaaaaaataataaatgcatctagtaatttgaaaaggggtttacatataggga 38761262  T
Q  274 caaaaataaaat 285  Q
    ||||||||||||    
T  38761261 caaaaataaaat 38761250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 31252658 - 31252549
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||| |||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||| |||||||| ||||| ||||||| |||||| |||    
T  31252658 catattttaagacaagatagtagtataaattaggggtatgtttaagaaaataataataaatgcatctagtaatttgaaaagaggtttacatttaggaaca 31252559  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  31252558 aaaataaaat 31252549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 1177159 - 1177049
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa--taataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||| ||||||||||||||||||||| || |||||||| |||||||  ||||||||||||| |||||||||||||||||||||  ||||| |||    
T  1177159 catatttcaaaacaagatagtagtattaattaggggtatgtttaggaaaaaaaataataaatgcatctagtaatttaaaaaggggtttatatttagagac 1177060  T
Q  275 aaaaataaaat 285  Q
    |||| ||||||    
T  1177059 aaaagtaaaat 1177049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 1769450 - 1769343
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||| | |||||| ||| | ||||||| |||||  |||||    
T  1769450 atatttcaagacaagttagtagtattaattaagggtatgtttaagaaaaaataataaatgcatctaataatttgaaatgaggtttacatttagtaacaaa 1769351  T
Q  278 aataaaat 285  Q
    ||||||||    
T  1769350 aataaaat 1769343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 31746408 - 31746302
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||  |||| ||||| ||||||||| || |||||||| |||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||    
T  31746408 catatttcaaagcaagttagtattattaattaggggtatgtttaggaaaaaataataaatgtatctagtaatttgaaaaggggtttacatttagggacaa 31746309  T
Q  277 aaataaa 283  Q
    |||||||    
T  31746308 aaataaa 31746302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 38202995 - 38202886
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||||| ||||||||||||| || ||| |||||||||||| ||||||||||||| |||||||| ||||||||||||  | ||| ||||    
T  38202995 catatttcaagacaagatggtagtattaattaggggtatatttaagaaaaaaataataaatgcatctagtaatttgaaaaggggtttatatgtagagaca 38202896  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  38202895 aaaataaaat 38202886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 10396231 - 10396124
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaat-aataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||||||||||||||| || ||||||||| ||||||||||| |||||||| |||||||||||| |||||||| ||||||||||||  || |||||||||    
T  10396231 tatttcaagacaagataataatattaattagggatatgtttaggaaaaaataaataaatgcatctagtaatttgaaaaggggtttatattaagggacaaa 10396132  T
Q  278 aataaaat 285  Q
    || |||||    
T  10396131 aacaaaat 10396124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 7172322 - 7172427
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||| ||| |||||||||| |||||||  ||||||| |||||||||||||||||||| |||||||| |||||||| |||| ||||||||| |    
T  7172322 catatttcaagataagttagtagtatttattatgggcatgtttatgaaaaaataataaatgcatctagtaatttgaaaagggg-ttacatttagggacta 7172420  T
Q  277 aaataaa 283  Q
    |||||||    
T  7172421 aaataaa 7172427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 180 - 316
Target Start/End: Original strand, 40517846 - 40517992
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    ||||||||||||| ||||||||||||||| || |||||||| ||||| ||||||||||| ||| | |||||| |||||| |||||| |||||||||||||    
T  40517846 atttcaagacaagttagtagtattaattaggggtatgtttaggaaaaaaataataaatggatctaataatttgaaaaggagtttacatttagggacaaaa 40517945  T
Q  279 ataaa---------atgcttagatatagggacggagggagtacatgc 316  Q
    |||||         ||| |||||||||||||||||||||||| ||||    
T  40517946 ataaagtcaaatggatgtttagatatagggacggagggagtatatgc 40517992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 5191552 - 5191443
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||  ||| |||| |||||| || |||||||||||||||| || |||||||||| |||||||| ||||||||||||| |||||| |||    
T  5191552 catatttcaagacaatttagcagtactaattaggggtatgtttaagaaaaaaatattaaatgcatctagtaatttgaaaaggggtttacatttaggaaca 5191453  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  5191452 aaaataaaat 5191443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 26878731 - 26878622
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||| ||||||||||||||| || |||||||| ||||||| |||||||| |||| |||||||||||||   |||||| ||||||||||    
T  26878731 catatttcaagataagttagtagtattaattaggggtatgtttaggaaaaaaataataaatacatctagtaatttaaaaaaaagtttacatttagggaca 26878632  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  26878631 aaaataaaat 26878622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 24512170 - 24512060
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa--aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||||| || |||||||||||||||| || ||||||||||||||  ||||||||||||||| |  ||||| |||| || ||||| |||||||||    
T  24512170 catatttcaagataaaatagtagtattaattaggggtatgtttaagaaaaataataataaatgcatctaagaatttgaaaaaggatttacatttagggac 24512071  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  24512070 aaaaataaaat 24512060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 24962366 - 24962259
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||  |||||| |||||||| || |||||||| ||||| ||||||||||||||| |||||||| |||||| |||||| |||| |||||||    
T  24962366 tatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagtttacatttaaggacaaa 24962267  T
Q  278 aataaaat 285  Q
    ||||||||    
T  24962266 aataaaat 24962259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 25198392 - 25198498
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||| ||||||||||||||| || |||||||| ||||| ||||||||||||||| |||||||| |||| | |||||| ||||||||||    
T  25198392 catatttcaagataagttagtagtattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaa-gagtttacatttagggaca 25198490  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  25198491 aaaataaa 25198498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 38773351 - 38773204
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||||| |||||||||||||  | |||||||| ||||||| ||||||||||||| | |||||| ||||| ||||||  |||||||| |    
T  38773351 catatttcaagacaagatggtagtattaattagaggtatgtttaggaaaaaaataataaatgcatctaataatttgaaaagaggtttaaatttagggata 38773252  T
Q  276 aaaataaaa---------tgcttagatatagggacggagggagtacat 314  Q
    |||||||||         ||||||||||||| ||||||||||||||||    
T  38773251 aaaataaaatcaaatgagtgcttagatatagtgacggagggagtacat 38773204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 45203861 - 45203948
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggttta 263  Q
    |||||||||||||||| ||||||||||||||| || |||||||| ||||| ||||||||||||||| ||||||||| |||||||||||    
T  45203861 catatttcaagacaagttagtagtattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttataaaggggttta 45203948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 40337194 - 40337085
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||||||||||||||| |||||||||||| || |||||||| | ||||||||||||||||||  |||||||| ||||  ||||||| |||| ||| |    
T  40337194 catatttcaagacaagataatagtattaattaagggtatgtttaggaaaaaaataataaatgcatatagtaatttgaaaataggtttacatttaaggata 40337095  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  40337094 aaaataaaat 40337085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 7772615 - 7772723
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||| |||||| |  ||||||||| ||||||||||| ||||||||||||||| |||| |||||||| |||||  |||||  |||||||||||    
T  7772615 catatttcaagataagatattgatattaattagggatatgtttaggaaaaaataataaatacatctagtaatttgaaaagatgtttatatttagggacaa 7772714  T
Q  277 aaataaaat 285  Q
    || ||||||    
T  7772715 aagtaaaat 7772723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 283
Target Start/End: Original strand, 10860830 - 10860930
Alignment:
Q  184 caagacaagatagtagtattaattatggatatgtttaagaaaaa-ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataa 282  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||| |||||||||||||| |||||||| || | || ||||| |||||||| ||||||||    
T  10860830 caagacaagttagtagtattaattatggaaatgtttaggaaaaatataataaatgcatctagtaatttgaagatggatttacatttagggataaaaataa 10860929  T
Q  283 a 283  Q
    |    
T  10860930 a 10860930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 37956224 - 37956326
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||||||||||| || ||||||||| || |||||||| |||||||     |||||||  |||||||||||||||||||||| |||||||||||    
T  37956224 catatttcaagacaagataataatattaattaggg-tatgtttacgaaaaaa-----aatgcatttagtaatttaaaaaggggtttacatttagggacaa 37956317  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  37956318 aaataaaat 37956326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 43980584 - 43980477
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||| ||  |||||| |||||||| || |||||||| ||||| ||||||||||||||| |||||||| |||||| |||||| |||| |||||||    
T  43980584 tatttcaagataaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagtttacatttaaggacaaa 43980485  T
Q  278 aataaaat 285  Q
    ||||||||    
T  43980484 aataaaat 43980477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 45183861 - 45183756
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    |||| |||||||| |||||| ||| |||| || |||||||| | ||||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||    
T  45183861 atttgaagacaagttagtag-attgattaggggtatgtttagaaaaaaaataataaatgcatctagtaatttaaaaaggagtttacatttagagacaaaa 45183763  T
Q  279 ataaaat 285  Q
    |||||||    
T  45183762 ataaaat 45183756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 12762945 - 12763053
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| ||||| ||||||||| || ||| |||| | ||||||||||||||||||| ||||||||  ||| |||||||  ||||||||||    
T  12762945 catatttcaagacaagttagtaatattaattaggggtatctttaggaaaaaaataataaatgcatctagtaatttggaaa-gggtttagatttagggaca 12763043  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  12763044 aaaataaaat 12763053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 14577655 - 14577566
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa----taataaatgcatcaagtaatttaaaaaggggttta 263  Q
    |||||||||||||||| ||||||||||||||| ||||||| |||||||||||    ||||||||||||| ||||||||||||||| |||||    
T  14577655 catatttcaagacaagttagtagtattaattagggatatg-ttaagaaaaaaatattaataaatgcatctagtaatttaaaaaggagttta 14577566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 2562724 - 2562622
Alignment:
Q  185 aagacaagatagtagtattaattatggatatgttta--agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataa 282  Q
    |||||||||||||||||||||||| |||||| ||||  | ||||||||||||||||||| | |||||||||||||  ||||| |||||  | ||||||||    
T  2562724 aagacaagatagtagtattaattagggatatatttatgaaaaaaaataataaatgcatctaataatttaaaaaggaatttacatttagaaaaaaaaataa 2562625  T
Q  283 aat 285  Q
    |||    
T  2562624 aat 2562622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 25184999 - 25185054
Alignment:
Q  44 cgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  25184999 cgtcccttaatgtatgcacccattgcctttttcacatttcttaagaaaagttgtca 25185054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 177 - 281
Target Start/End: Original strand, 25185133 - 25185241
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa----ataataaatgcatcaagtaatttaaaaaggggtttacgtttaggg 272  Q
    |||||||||||| ||||||||||||||||||| || |||||||| ||||||    ||||  |||||||| |||||||| |||||| |||||| |||| ||    
T  25185133 catatttcaagataagatagtagtattaattaggggtatgtttaggaaaaaaaagataaataatgcatctagtaatttgaaaaggtgtttacatttatgg 25185232  T
Q  273 acaaaaata 281  Q
    |||||||||    
T  25185233 acaaaaata 25185241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 37141831 - 37141938
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa--aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||| |||||||| ||||| ||||| | ||||||||| |||||  ||||||||||||||| |||||| | |||| ||||||||  ||||||||||    
T  37141831 tatttcaagtcaagatagaagtat-aattaagaatatgtttaggaaaaaaaataataaatgcatctagtaatgtgaaaaagggtttacaattagggacaa 37141929  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  37141930 aaataaaat 37141938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 39543663 - 39543556
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaat--aataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||| |||||||||| |||||| ||||| || ||| ||||||| |||||||   |||||||||||| |||||||| |||| |||||||| |||||||||    
T  39543663 catatctcaagacaagttagtagcattaagta-ggagatgtttaggaaaaaaataaataaatgcatctagtaatttgaaaaagggtttacatttagggac 39543565  T
Q  275 aaaaataaa 283  Q
    |||||||||    
T  39543564 aaaaataaa 39543556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 40790891 - 40791000
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||  |||||||||||| || ||  ||||||||||||| |||||||||| | || |||||||| ||||||   |||| ||||||||||    
T  40790891 catatttcaagacaacttagtagtattaactaggggcatgtttaagaaaaaaataataaatacctctagtaatttgaaaaggaaattacatttagggaca 40790990  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  40790991 aaaataaaat 40791000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 41371807 - 41371697
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa----aataataaatgcatcaagtaatttaaaaaggggtttacgtttaggg 272  Q
    |||||||||||||||| |||||||||||||||  | |||||||| |||||    |||||||||||||||   ||||||| ||  |||||||| |||||||    
T  41371807 catatttcaagacaagttagtagtattaattagagttatgtttaggaaaaaaataataataaatgcatctgataatttacaagagggtttacatttaggg 41371708  T
Q  273 acaaaaataaa 283  Q
    |||||||||||    
T  41371707 acaaaaataaa 41371697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 14522344 - 14522264
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaagggg 259  Q
    ||||||||| ||| ||||||||||||||| || |||||||| ||||||| ||||||||||||| |||||||| ||||||||    
T  14522344 atttcaagataagttagtagtattaattaagggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaagggg 14522264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 37600891 - 37600783
Alignment:
Q  177 catatttcaagacaagatagtagtatt-aattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||||||||| ||||| |||| ||||| || |||||||| | ||||||||||||||||||| | |||||| |||  | |||||| |||||||||    
T  37600891 catatttcaagacaagttagtaatatttaattaggggtatgtttagaaaaaaaataataaatgcatctaataatttgaaagagagtttacatttagggac 37600792  T
Q  275 aaaaataaa 283  Q
    |||||||||    
T  37600791 aaaaataaa 37600783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 34158022 - 34158128
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||| |||||||  |||||| ||||||||||| |||||||| ||||| ||||||||||||||  |||||||| |||| |  ||||| ||||||||||||    
T  34158022 tattttaagacaaattagtaggattaattatgg-tatgtttaggaaaataataataaatgcatatagtaatttgaaaatgaatttacatttagggacaaa 34158120  T
Q  278 aataaaat 285  Q
    ||||||||    
T  34158121 aataaaat 34158128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 40337332 - 40337277
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagtt 95  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  40337332 cctccgtcccttaatgtaggcatccattgtctttttcacatttcttatgaaaagtt 40337277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 43191480 - 43191375
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||| ||| |||||| |||||||| || |||||||| || |||| ||   ||||||| |||||||| |||||| |||||| ||||| |||||    
T  43191480 catatttcaagataagttagtaggattaattaggggtatgtttaggagaaaaaaa---atgcatctagtaatttgaaaaggagtttacatttagagacaa 43191384  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  43191383 aaataaaat 43191375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 45185267 - 45185162
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||| |||||||| |||||||||| |||| || ||||||||  |||||  |||||||||||||| |||||||| |||| | |||||| ||||| ||||||    
T  45185267 attttaagacaagttagtagtattgattaagggtatgtttagaaaaaataataataaatgcatccagtaatttgaaaatgagtttacatttagagacaaa 45185168  T
Q  278 aataaa 283  Q
    ||||||    
T  45185167 aataaa 45185162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 4273947 - 4273862
Alignment:
Q  199 gtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    |||||||||| || |||||||| | ||||||||||||||||||| |||||||| |||||  |||||| |||| |||||||||||||    
T  4273947 gtattaattaagggtatgtttagaaaaaaaataataaatgcatctagtaatttgaaaagaagtttacatttaaggacaaaaataaa 4273862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 22590478 - 22590579
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||| ||||| ||| ||||||||||||||| || |||||| ||| ||| ||||||||||| ||| |||||||| ||||| ||||||  ||||||||||    
T  22590478 catattgcaagataagttagtagtattaattaggggtatgttcaaggaaataataataaatggatctagtaatttgaaaagaggtttatatttagggaca 22590577  T
Q  276 aa 277  Q
    ||    
T  22590578 aa 22590579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 25198264 - 25198313
Alignment:
Q  50 ttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  25198264 ttaatgtaggcatccattgcctttttcacatttcttaagaaaagttgtca 25198313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 36437604 - 36437684
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag--aaaaaataataaatgcatcaagtaatttaaaaa 255  Q
    |||||||||||||||| ||||||||||| ||| || |||||||| |  ||||||||||||||||||| |||||||| ||||    
T  36437604 catatttcaagacaagttagtagtattagttaggggtatgtttaggcaaaaaaataataaatgcatctagtaatttgaaaa 36437684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 16002862 - 16002806
Alignment:
Q  42 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtc 98  Q
    ||||||||||||||||| |||||||| |||||||||||||| ||| |||||||||||    
T  16002862 tccgtcccttaatgtagacacccatttcctttttcacattttttaagaaaagttgtc 16002806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 37956087 - 37956145
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||    
T  37956087 cctccgtcccttaatgtaggtacc-attgtctttttcacatttcttaagaaaagttgtca 37956145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 40808014 - 40807907
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| |||||||||| ||||    |||||||| ||||| |||| |||||||||  |||||||| ||| | ||||||| |||| |||||    
T  40808014 catatttcaagacaagttagtagtattgattagttgtatgtttaggaaaataatattaaatgcatgtagtaatttgaaatgaggtttacatttaaggaca 40807915  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  40807914 aaaataaa 40807907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 41087077 - 41087183
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| ||||||||||||||| || ||| |||| | ||||||||||||||||||  |||||||| ||| |  |||||| |||||| | |    
T  41087077 catatttcaagacaagttagtagtattaattaagggtat-tttaggaaaaaaataataaatgcatatagtaatttgaaaggatgtttacatttaggaata 41087175  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  41087176 aaaataaa 41087183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 885567 - 885672
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    ||||||||||||  |||| |||||||||| || ||| |||| | |||||||||||||| |||| |||||||| ||||||||||||  ||||||  |||||    
T  885567 atttcaagacaaattagtggtattaattaagg-tatatttatggaaaaaataataaattcatctagtaatttgaaaaggggtttaaatttaggaccaaaa 885665  T
Q  279 ataaaat 285  Q
    |||||||    
T  885666 ataaaat 885672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 24512311 - 24512249
Alignment:
Q  37 cttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||||||||||||| |||||  ||||||||||||| ||| ||||| ||||||    
T  24512311 cttcctccgtcccttaatgtaggcatccattatctttttcacattttttaagaaaatttgtca 24512249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 38773490 - 38773444
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttctta 86  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||    
T  38773490 cctccgtcccttaatgtaggcaaccattgtctttttcacatttctta 38773444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 16357137 - 16357198
Alignment:
Q  223 aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaa 284  Q
    |||||||||| |||||||   ||||||| ||||||||||||| |||||||||||||||||||    
T  16357137 aaaaaataattaatgcatgttgtaatttgaaaaggggtttacatttagggacaaaaataaaa 16357198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 30262538 - 30262434
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaa 279  Q
    ||||||||||||| ||||||||||||||| ||  |||||||  |||||||||| |||||||| |||||||| || | || ||||  |||| ||||||||     
T  30262538 atttcaagacaagttagtagtattaattaggggcatgtttagaaaaaaataat-aatgcatctagtaatttgaataaggatttatatttatggacaaaat 30262440  T
Q  280 taaaat 285  Q
    ||||||    
T  30262439 taaaat 30262434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 17933816 - 17933915
Alignment:
Q  185 aagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaa 284  Q
    |||||||| || || |||||||||||  |||||||| ||||| |||||||||| ||| |||||||| |||| || | ||  |||||||||||||||||||    
T  17933816 aagacaaggtattaatattaattatgagtatgtttaggaaaa-ataataaatgtatctagtaatttgaaaaaggatgtatatttagggacaaaaataaaa 17933914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 23399780 - 23399673
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||  |||| |||||||||||||||  | |||||||||||||||| |||||| | ||  |||||||| |||   ||||||| |||||| ||||    
T  23399780 catatttcaaaccaagttagtagtattaattagaggtatgtttaagaaaaaa-aataaaagtatttagtaatttgaaactaggtttacatttaggaacaa 23399682  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  23399681 aaataaaat 23399673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 39543802 - 39543746
Alignment:
Q  42 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtc 98  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||| |||| ||||||    
T  39543802 tccgtcctttaatgtaggcacctattgcctttttcatatttcttaagaaatgttgtc 39543746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 40601992 - 40601936
Alignment:
Q  227 aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    ||||||||||||||| |||||||| ||||| ||||||| |||| |||||||||||||    
T  40601992 aataataaatgcatctagtaatttgaaaagaggtttacatttaaggacaaaaataaa 40601936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 10396369 - 10396310
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||| |||| ||||||||| | |||||||||||| ||| ||||||||||||    
T  10396369 cctccgtcccttattgtatgcacccatttcatttttcacatttattaagaaaagttgtca 10396310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 12998684 - 12998617
Alignment:
Q  184 caagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaattt 250  Q
    ||||||||| ||||||||||||||| || |||||||| | |||||||||| |||||||| ||||||||    
T  12998684 caagacaagttagtagtattaattaggggtatgtttaggaaaaaaataattaatgcatcgagtaattt 12998617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 36309599 - 36309497
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||| |||||||| ||||| ||||||||| || |||||||| ||||||  |||||||||||||| |  ||||||||||| | ||||  ||||| |||    
T  36309599 catattttaagacaagttagtattattaattagggttatgtttaggaaaaataataataaatgcatctaagaatttaaaaagagatttatatttagagac 36309500  T
Q  275 aaa 277  Q
    |||    
T  36309499 aaa 36309497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 38770190 - 38770103
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggttta 263  Q
    |||||||||||||||||   |||||||||||| |||||| |||| | ||||||||||||||  ||  |||||||| ||||||||||||    
T  38770190 catatttcaagacaagaggatagtattaattagggatatatttaggaaaaaaataataaatatatttagtaatttgaaaaggggttta 38770103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 38770328 - 38770269
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||| ||||||||||||||| ||||| |||||||| |||||||| || |||||||||    
T  38770328 cctccgttccttaatgtaggcacgcattgtctttttcatatttcttaagataagttgtca 38770269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 311
Target Start/End: Complemental strand, 45283488 - 45283346
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||| |||| |||||  |||||||| ||||||||||| |||||| ||||||| | ||| | |||||| |||| |  ||||| |||| ||||||    
T  45283488 catatttcaag-caagttagtaacattaattagggatatgtttaggaaaaattaataaacgtatctaataatttgaaaaagaatttacatttaaggacaa 45283390  T
Q  277 aaata---------aaatgcttagatatagggacggagggagta 311  Q
    |||||         ||||||||||||||| ||||||||||||||    
T  45283389 aaataaagtcaaataaatgcttagatataaggacggagggagta 45283346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 57329 - 57271
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtc 98  Q
    ||||||||||||||| |||||||  ||||  |||||||||||||||| |||||||||||    
T  57329 cctccgtcccttaatataggcacttattgtttttttcacatttcttaagaaaagttgtc 57271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 10709417 - 10709495
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaa 255  Q
    |||||||||| ||||| |||||||| |||||| |||||||||||  ||||| ||||||| ||||| | |||||| ||||    
T  10709417 catatttcaaaacaagttagtagtaataattagggatatgtttataaaaaattaataaaagcatctaataatttgaaaa 10709495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 38203133 - 38203075
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtc 98  Q
    ||||||||| ||||||||||||||| ||  |||||||||||||||||  ||||||||||    
T  38203133 cctccgtcctttaatgtaggcacccgttatctttttcacatttcttaataaaagttgtc 38203075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 3006109 - 3006020
Alignment:
Q  195 agtagtattaattatggatatgtttaagaa-aaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    |||| ||||||||| || ||| |||| ||| |||||||||||| |||| |||||||| ||||| | ||||| |||||| |||||||||||    
T  3006109 agtaatattaattaggggtatctttaggaagaaaataataaattcatctagtaatttgaaaagagatttacatttaggaacaaaaataaa 3006020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 31673717 - 31673809
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||||||||| || |||||||| ||||| ||||||||||| |||  ||||||| |||| |||||||| || | ||| |||| ||||||    
T  31673717 tagtagtattaattaagggtatgtttaggaaaagaataataaatgtatcttgtaatttgaaaaagggtttacattgaaggataaaagtaaaat 31673809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 256
Target Start/End: Original strand, 34116257 - 34116336
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaa-gaaaaaat--aataaatgcatcaagtaatttaaaaag 256  Q
    ||||||||||||| ||||||||||| |||  ||||||||||| ||||||||  |||||||  ||| ||||||||||||||    
T  34116257 atttcaagacaagttagtagtattagttagagatatgtttaaggaaaaaataaaataaatatatctagtaatttaaaaag 34116336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 7727352 - 7727289
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttt-aagaaaaaataataaatgca 239  Q
    |||||| ||||||||| ||||||||||||||| || ||| |||  |||||||||||||||||||    
T  7727352 catattccaagacaagttagtagtattaattagggttatatttggagaaaaaataataaatgca 7727289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 14907236 - 14907287
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa 228  Q
    |||||||||||| ||| ||| ||||||||||| || ||||||||||||||||    
T  14907236 catatttcaagataagttagcagtattaattaagggtatgtttaagaaaaaa 14907287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 16644175 - 16644120
Alignment:
Q  42 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    |||||||||  ||||| |||| |||||| |||||||||||||||| ||||||||||    
T  16644175 tccgtccctgtatgtaagcactcattgcatttttcacatttcttaagaaaagttgt 16644120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 37141691 - 37141750
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||| ||||||||| ||||| ||||| |||||||||||| |||  |||||||||||    
T  37141691 cctccgtctcttaatgtaagcacctattgcatttttcacattttttaaaaaaagttgtca 37141750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 11444073 - 11444162
Alignment:
Q  185 aagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||  ||||||||||||||| || ||| |||  |||||||||||||||||||| |||||||| |||  |||  ||| ||||||||||    
T  11444073 aagacaaattagtagtattaattagggttatatttg-gaaaaaataataaatgcatctagtaatttgaaagtgggcatacatttagggaca 11444162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 2031319 - 2031384
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatc 241  Q
    |||||||||||| ||  |||||||||||||||  | |||||||||||||| |||||||||| ||||    
T  2031319 catatttcaagataaattagtagtattaattagaggtatgtttaagaaaagaataataaatacatc 2031384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 4840843 - 4840794
Alignment:
Q  187 gacaagatagtagtattaattatggatatgtttaagaaaaaataataaat 236  Q
    |||||| ||||||| ||||||| |  ||||||||||||||||||||||||    
T  4840843 gacaagttagtagttttaattacgagtatgtttaagaaaaaataataaat 4840794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 23280754 - 23280860
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||| |||| |||| |||||||||||||||  | || ||||||||||||  |||||| | ||  |||||||| ||||  | ||||| |||||| ||||    
T  23280754 catattacaagccaagttagtagtattaattagaggtacgtttaagaaaaa--aataaaagtatttagtaatttgaaaatagatttacatttaggaacaa 23280851  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  23280852 aaataaaat 23280860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 2237592 - 2237652
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgca 239  Q
    |||| ||||| ||| ||||||||||||||| || |||||||   |||||||||||||||||    
T  2237592 tattccaagataagttagtagtattaattagggttatgtttggcaaaaaataataaatgca 2237652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 5e-33; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 44424698 - 44424805
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||||||||||||||||||| || |||||||| ||||||| |||||||||||| |||||||| |||| |||||||| |||||||||||    
T  44424698 catatttcaagacaagatagtagtattaattaggggtatgtttaggaaaaaa-aataaatgcatctagtaatttgaaaaagggtttacatttagggacaa 44424796  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  44424797 aaataaaat 44424805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 27297680 - 27297789
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||| | |||||| |||||| |||||| |||| |||||    
T  27297680 catatttcaagacaagatagtagtattaattagggatatgtttaggaaaaaaataataaatgcatctactaatttgaaaaggagtttacatttaaggaca 27297779  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  27297780 aaaataaaat 27297789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 177 - 308
Target Start/End: Original strand, 15851634 - 15851775
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||||||||||| |||||||||||||||| || |||||||| ||||||  |||||||||||||| |||||||| |||||| |||||| ||||||||     
T  15851634 catatttcaagacaaaatagtagtattaattaggggtatgtttaggaaaaataataataaatgcatctagtaatttgaaaaggagtttacatttagggag 15851733  T
Q  275 aaaaataaaat--------gcttagatatagggacggaggga 308  Q
    |||||||||||        |||||||||||||||||||||||    
T  15851734 aaaaataaaatcaaatggggcttagatatagggacggaggga 15851775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 31644444 - 31644336
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||| ||||||| || |||||||||||||||| || |||||||| |||||||||||||||||||| |||||||| |||| | |||||| |||||||||||    
T  31644444 cataattcaagataaaatagtagtattaattaggggtatgtttaggaaaaaataataaatgcatctagtaatttgaaaatgagtttacatttagggacaa 31644345  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  31644344 aaataaaat 31644336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 34330105 - 34330212
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||||||| |||||||| |||||| |||||| ||||  |||||    
T  34330105 catatttcaagacaagatagtagtattaatcagggatatgtttaggaaaaaa-aataaatgcatctagtaatttgaaaaggagtttacatttatagacaa 34330203  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  34330204 aaataaaat 34330212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 17250963 - 17250853
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa--taataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||||||||||||||||||||||||||||  | |||||||| |||||||  ||||||||||||  ||||||||||||||| |||||| ||||| |||    
T  17250963 catatttcaagacaagatagtagtattaattaaaggtatgtttaggaaaaaaaataataaatgcatatagtaatttaaaaaggagtttacatttagagac 17250864  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  17250863 aaaaataaaat 17250853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 3237826 - 3237927
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||       ||||||||| ||||||||||||||| |||||| |||||||||||    
T  3237826 catatttcaagacaagatagtagtattaattagggatatgtttaaaaaa-------aaatgcatctagtaatttaaaaaggagtttacatttagggacaa 3237918  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  3237919 aaataaaat 3237927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 7278614 - 7278506
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||| ||| ||||||||||||||| || |||||||||||||| ||||||||||||||| |||||||| ||||||| ||||| ||||| || ||    
T  7278614 atatttcaagataagttagtagtattaattaggggtatgtttaagaaaataataataaatgcatctagtaatttgaaaagggatttacatttagagataa 7278515  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  7278514 aaataaaat 7278506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 17663729 - 17663836
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||  |||||| |||||||| || |||||||| ||||| ||||||||||||||| |||||||| |||||| |||||| ||||||||||||    
T  17663729 tatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagtttacatttagggacaaa 17663828  T
Q  278 aataaaat 285  Q
    ||||||||    
T  17663829 aataaaat 17663836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 20362087 - 20362194
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||  |||||| |||||||| || |||||||| ||||| ||||||||||||||| |||||||| |||||| |||||| ||||||||||||    
T  20362087 tatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagtttacatttagggacaaa 20362186  T
Q  278 aataaaat 285  Q
    ||||||||    
T  20362187 aataaaat 20362194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 37355139 - 37355249
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa--aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||||||||||||  ||||||||||| || |||||||| |||||  ||||||||||||||| |||||||| ||||||||||||  ||||| |||    
T  37355139 catatttcaagacaagataaaagtattaattaagggtatgtttaggaaaataaataataaatgcatctagtaatttgaaaaggggtttatatttagagac 37355238  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  37355239 aaaaataaaat 37355249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 8065074 - 8064968
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| ||||||||||||||| || |||||||| ||||||  |||||||| ||| |||||||| ||| ||||||||| |||||||||||    
T  8065074 catatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaatgaataaatgtatctagtaatttgaaagggggtttacatttagggacaa 8064975  T
Q  277 aaataaa 283  Q
     ||||||    
T  8064974 taataaa 8064968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 534568 - 534677
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataa-taaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||||||||||||||| |||||||||||| || ||| |||| ||||||| || |||||||||| |||||||| ||||| ||||||| |||| |||||    
T  534568 catatttcaagacaagataatagtattaattaggggtatatttaggaaaaaaaaaataaatgcatctagtaatttgaaaagaggtttacatttaaggaca 534667  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  534668 aaaataaaat 534677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 27749580 - 27749679
Alignment:
Q  187 gacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    |||||| ||||||||||||||| || |||||||| ||||||| |||||||||||||  ||||||| |||||| |||||| ||||||||||||||||||||    
T  27749580 gacaagttagtagtattaattaggggtatgtttaggaaaaaagtaataaatgcatcttgtaatttgaaaaggagtttacatttagggacaaaaataaaat 27749679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 38982073 - 38981964
Alignment:
Q  177 catatttcaagacaa--gatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||||||||  | ||||||||||||||| || ||||| || |||||||||||||||||||| | ||||||||||| |||||||  |||||||||    
T  38982073 catatttcaagacaattgttagtagtattaattaggggtatgtata-gaaaaaataataaatgcatctaataatttaaaaatgggtttagatttagggac 38981975  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  38981974 aaaaataaaat 38981964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 9718172 - 9718065
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||| ||||||||||||||| || |||||||| | ||||||||||||||||||| | |||||| ||| || |||||| |||||  |||||    
T  9718172 tatttcaagacaagttagtagtattaattaagggtatgtttaggaaaaaaataataaatgcatctaataatttgaaagggtgtttacatttagaaacaaa 9718073  T
Q  278 aataaaat 285  Q
    ||||||||    
T  9718072 aataaaat 9718065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 44274518 - 44274420
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaag--aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||||| |||| |||||||||| || ||||||||||  ||||||||||||||||||  |||||||| ||||||| ||||| |||||||||||    
T  44274518 atttcaagacaagttagtggtattaattaggggtatgtttaaggaaaaaaataataaatgcatttagtaatttgaaaagggatttacatttagggacaa 44274420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 28733927 - 28734033
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||| ||  ||||||||||||||| || |||||||| ||||| ||||||||||||||  |||||||| ||||| ||||||  |||||||||||    
T  28733927 atatttcaagataaattagtagtattaattaggggtatgtttaggaaaacaataataaatgcatatagtaatttgaaaagaggtttagatttagggacaa 28734026  T
Q  277 aaataaa 283  Q
    |||||||    
T  28734027 aaataaa 28734033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 41665813 - 41665918
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| || |||||||||||| || |||||||| ||||||| |||||| ||||| |||||||| |||  | |||||| |||||||||||    
T  41665813 catatttcaagacaagttaatagtattaattaggggtatgtttaggaaaaaa-aataaaagcatctagtaatttgaaagagagtttacatttagggacaa 41665911  T
Q  277 aaataaa 283  Q
    |||||||    
T  41665912 aaataaa 41665918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 13534508 - 13534617
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||| ||||| |||||||| ||| ||  ||||  ||||| || |    
T  13534508 catatttcaagacaagttagtagtattaattagggatatgtttaggaaaaaattaataaacgcatctagtaatttgaaatggaatttaaatttagagaaa 13534607  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  13534608 aaaataaaat 13534617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 2048831 - 2048723
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaa-aaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||||||| |||||||||| |||| || |||||||||||| ||||||||||||||||| | |||||| ||||  | ||||| |||||  ||||    
T  2048831 atatttcaagacaagttagtagtatttattaggggtatgtttaagaaaaaaataataaatgcatctaataatttgaaaaaagatttacatttagaaacaa 2048732  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  2048731 aaataaaat 2048723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 7255704 - 7255809
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| ||||| |||||||||| |||| |||||||| |||  |||||||  |||||||| |    
T  7255704 catatttcaagacaaattagtagtattaattagggatatgtttaggaaaataataataaatacatctagtaatttgaaa--gggtttatatttagggata 7255801  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  7255802 aaaataaa 7255809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 178 - 285
Target Start/End: Original strand, 41865819 - 41865927
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||| |||||||| ||||| |||| |||| || |||||||| ||||| ||||||||||||||| | |||||| |||||| |||||| |||||| ||||    
T  41865819 atattttaagacaagttagtaatatttattaggggtatgtttaggaaaaaaataataaatgcatctaataatttgaaaaggtgtttacatttaggaacaa 41865918  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  41865919 aaataaaat 41865927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 198 - 285
Target Start/End: Original strand, 44421857 - 44421945
Alignment:
Q  198 agtattaattatggatatgtttaagaaaaaataa-taaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||||| ||||||||||| ||||||| || |||||||||| | ||||||| |||||||||||| ||||| ||||||||||||||    
T  44421857 agtattaattaaggatatgtttaggaaaaaaaaaataaatgcatctaataatttagaaaggggtttacatttagagacaaaaataaaat 44421945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 25731188 - 25731083
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||| |||||||| ||||||||||||||| || |||||||| |||||||| |||||||  |  |||||||| |||| |||||||| |||| ||||||    
T  25731188 catattttaagacaagttagtagtattaattaggggtatgtttaggaaaaaattataaatggttatagtaatttgaaaa-gggtttacatttaaggacaa 25731090  T
Q  277 aaataaa 283  Q
    |||||||    
T  25731089 aaataaa 25731083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 1246414 - 1246305
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||||||||||||||| |||||||||||| || |||||||| | ||| ||||||||||| ||  |||||||| ||||| ||||||  |||| || ||    
T  1246414 catatttcaagacaagataatagtattaattaggggtatgtttagaaaaataataataaatgtatttagtaatttgaaaagtggtttatatttaagggca 1246315  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  1246314 aaaataaaat 1246305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 44424560 - 44424617
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  44424560 cctccgtcccttaatgtaggcactcattgcatttttcacatttcttaagaaaagttgt 44424617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 45150726 - 45150635
Alignment:
Q  196 gtagtattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    |||||||||||||  | |||||||||||||||  |||||||||| ||| || ||||| |||||| |||||| ||||||||||||||||||||    
T  45150726 gtagtattaattaaaggtatgtttaagaaaaataataataaatgtatctagcaatttgaaaaggagtttacatttagggacaaaaataaaat 45150635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 23464786 - 23464891
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaat-aataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||| ||||| ||||||||||||||| || ||| ||  ||||||||| |||||||||||| |||||||| ||||| | ||||| ||||||||||    
T  23464786 catatttcaaaacaagttagtagtattaattaggggtat-ttgtagaaaaaataaataaatgcatctagtaattt-aaaagagatttacatttagggaca 23464883  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  23464884 aaaataaa 23464891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 40346083 - 40345969
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaa------aaaataataaatgcatcaagtaatttaaaaaggggtttacgtttag 270  Q
    ||||||||||| |||| | ||||||||||||| || |||||||| |||      ||||||||||||| ||| |||||||| |||||| |||||| |||||    
T  40346083 catatttcaaggcaagtttgtagtattaattaggggtatgtttaggaaggaaaaaaaataataaatgtatctagtaatttgaaaaggagtttacatttag 40345984  T
Q  271 ggacaaaaataaaat 285  Q
    | |||||||||||||    
T  40345983 gaacaaaaataaaat 40345969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 2131860 - 2131966
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||| |||||||| |||| |||||||||| || ||||||||||||  || || |||| |||| |||||||| || |||||||||| |||||  ||||    
T  2131860 catatttaaagacaagttagttgtattaattaggggtatgtttaagaaggaaaaaaaaatacatctagtaatttgaataggggtttacatttagacacaa 2131959  T
Q  277 aaataaa 283  Q
    |||||||    
T  2131960 aaataaa 2131966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 35178927 - 35178874
Alignment:
Q  46 tcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  35178927 tcccttaatgtaggcacccattgtttttttcacatttcttaagaaaagttgtca 35178874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 44101484 - 44101560
Alignment:
Q  186 agacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggttta 263  Q
    |||||||  |||||||||||||| | ||||||||||| |||| ||||||||||||| |||||||| ||||||||||||    
T  44101484 agacaagtaagtagtattaattaggtatatgtttaagtaaaa-taataaatgcatctagtaattttaaaaggggttta 44101560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 2521300 - 2521193
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||  |||||| |||||||| || |||||||| ||||| ||||||||||||||| || ||||| |||||   ||||| |||||  |||||    
T  2521300 tatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagcaatttgaaaagaaatttacatttagaaacaaa 2521201  T
Q  278 aataaaat 285  Q
    ||||||||    
T  2521200 aataaaat 2521193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 8065212 - 8065153
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| || |||| |||||||    
T  8065212 cctccgtcccttaatgtaggctcccattgcccttttcacatttcctaagaaatgttgtca 8065153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 9718312 - 9718253
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||| |||| |||||||    
T  9718312 cctccgtcccttaatgtagccatccattgcatttttcacatttcttaagaaatgttgtca 9718253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 11071771 - 11071879
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaata---ataaatgcatcaagtaatttaaaaaggggtttacgtttaggga 273  Q
    |||||||||| ||| | ||||| ||||||||| ||  ||||||| |||||||||   ||||||||||| |||||||| |||||| |||||  ||||||||    
T  11071771 catatttcaaaaca-gttagtaatattaattaggggcatgtttaggaaaaaataataataaatgcatctagtaatttgaaaaggagtttagatttaggga 11071869  T
Q  274 caaaaataaa 283  Q
    ||||||||||    
T  11071870 caaaaataaa 11071879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 13534380 - 13534438
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||| |||| |||||||    
T  13534380 cctccgtcccttaatgtaggcacctattgcc-ttttcacatttcttaagaaatgttgtca 13534438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 38449716 - 38449609
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||| |  | || ||||||||| || |||||||| ||||||| ||||| ||||||| ||||| || ||||||||||||| |||||| | |    
T  38449716 catatttcaagacaggtcaataatattaattaggggtatgtttaggaaaaaaataatatatgcatctagtaagttgaaaaggggtttacatttaggaata 38449617  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  38449616 aaaataaa 38449609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 4033976 - 4034038
Alignment:
Q  223 aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||||||||||||| ||||||||| ||||||| |||| |||| |||| ||||||||||    
T  4033976 aaaaaataataaatgcatctagtaatttagaaaggggattacatttaaggactaaaataaaat 4034038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 37037542 - 37037488
Alignment:
Q  210 ggatatgtttaagaaaaaataataaatgcatcaagtaattt-aaaaaggggttta 263  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  37037542 ggatatgtttaagaaaaaataataaatgtatctagtaatttgaaaaaggggttta 37037488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 43710023 - 43710101
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaa-aaaataataaatgcatcaagtaatttaaaaa 255  Q
    ||||||||||| ||| |||||||||||||||||| |||||| | ||| ||||| ||||||||||| | |||||||||||    
T  43710023 atatttcaagataagttagtagtattaattatgggtatgttaaggaataaaatcataaatgcatctaataatttaaaaa 43710101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 24774968 - 24775077
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| |||||||| ||||   || |||||||| ||||| ||||||||||  ||| |||||||  ||||| | ||||  ||||||||||    
T  24774968 catatttcaagacaagttagtagtactaatcgggggtatgtttaggaaaaaaataataaatatatctagtaattcgaaaagagatttaaatttagggaca 24775067  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  24775068 aaaataaaat 24775077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 28264953 - 28264846
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa--taataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||||||||| || ||   ||||||| || |||||||| ||||||   ||||||||||||| |||||||| ||||| ||||||| || | ||||    
T  28264953 catatttcaagacaagttaata---ttaattaggggtatgtttaggaaaaatattaataaatgcatctagtaatttgaaaagaggtttacattaaaggac 28264857  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  28264856 aaaaataaaat 28264846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 247763 - 247907
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||| |||||||||| |||||||||| |||| || ||||| || | |||||||||||| |||||| | |||||| |||||| |||||| ||||| || |    
T  247763 catatctcaagacaagttagtagtattgattaagggtatgtgtagggaaaaaataataattgcatctactaatttgaaaaggagtttacatttagagata 247862  T
Q  276 aaaataaa---------atgcttagatatagggacggagggagta 311  Q
    ||| ||||          |||||||||||||||||||||||||||    
T  247863 aaactaaagtcaaatgggtgcttagatatagggacggagggagta 247907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 11459259 - 11459366
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgttta--agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||||||||||| ||||||||||||||| |  ||||||||  | |||||| ||||||| |||| | |||||||||||| | ||||  |||| ||| |||    
T  11459259 atttcaagacaagttagtagtattaattaagagtatgtttaggaaaaaaaaaaataaatacatctaataatttaaaaagagatttatatttaaggataaa 11459358  T
Q  278 aataaaat 285  Q
    ||||||||    
T  11459359 aataaaat 11459366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 14420782 - 14420886
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaa-aaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    ||||||||||| | || |||||||||||| |  |||||||| ||  ||||||||||||||||| |||||| | ||||| ||||||| |||||  ||||||    
T  14420782 atttcaagacatgttattagtattaattaggagtatgtttaggattaaaataataaatgcatctagtaatctgaaaagaggtttacatttagaaacaaaa 14420881  T
Q  279 ataaa 283  Q
    |||||    
T  14420882 ataaa 14420886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 197 - 279
Target Start/End: Original strand, 38107627 - 38107710
Alignment:
Q  197 tagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaa 279  Q
    |||||||||||| || |||||||| ||||| |||||||||||||||  ||||||| ||||| ||| || |||||| ||||||||    
T  38107627 tagtattaattaggggtatgtttaggaaaataataataaatgcatcttgtaatttgaaaagaggtgtatgtttagcgacaaaaa 38107710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 45214828 - 45214935
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||| |||| ||  ||||||||||||||| || |||||||||| ||||||||||||||| ||| |||||||| ||| ||| | ||| ||||| ||      
T  45214828 catattttaagataaattagtagtattaattaggggtatgtttaagaaaaaaataataaatgtatctagtaatttgaaatgggatatacatttagagaag 45214927  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  45214928 aaaataaa 45214935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 375347 - 375265
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaa-aaaataataaatgcatcaagtaatttaaaaaggg 258  Q
    |||||||||||||||| |||||||||| |||| | ||||||||| ||| |||||||||| | |||  |||||| |||||||||    
T  375347 catatttcaagacaagttagtagtattgattacgaatatgtttaggaacaaaataataactccatatagtaatgtaaaaaggg 375265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 4398549 - 4398479
Alignment:
Q  213 tatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    ||||||||  |||| | |||||||||||| |||||||| |||| |||||||| |||||| |||||||||||    
T  4398549 tatgtttagaaaaataaaataaatgcatctagtaatttgaaaaagggtttacatttaggaacaaaaataaa 4398479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 28733794 - 28733848
Alignment:
Q  44 cgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtc 98  Q
    ||||||||||||||||||||||||  ||||||||||||| ||| ||||| |||||    
T  28733794 cgtcccttaatgtaggcacccattttctttttcacattttttaagaaaaattgtc 28733848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 36174771 - 36174721
Alignment:
Q  200 tattaattatggatatgtttaagaaaaaataataaatgcatcaagtaattt 250  Q
    ||||||||| || |||||||||||||||||||||||| |||| ||||||||    
T  36174771 tattaattaggggtatgtttaagaaaaaataataaattcatctagtaattt 36174721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 41665677 - 41665734
Alignment:
Q  41 ctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||||||||| |||||  |||||||||||||||| |||| |||||||    
T  41665677 ctccgtcccttaatgtaggcactcattg-ttttttcacatttcttaagaaatgttgtca 41665734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 4758129 - 4758238
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||| |||| ||  ||||||||||||||| | ||||||||| | ||||||||||||||||||| | |||| | |||||   ||||| |||||  |||    
T  4758129 catattttaagaaaaattagtagtattaattaggaatatgtttaggaaaaaaataataaatgcatctaataatctgaaaagaaatttacatttagaaaca 4758228  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  4758229 aaaataaaat 4758238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 15851496 - 15851553
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    |||| |||||||||||||| || | |||| ||||||||||||||||| ||||||||||    
T  15851496 cctctgtcccttaatgtagacatctattgtctttttcacatttcttaagaaaagttgt 15851553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 32677578 - 32677658
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttt--aagaaaaaataataaatgcatcaagtaatttaaaaa 255  Q
    |||||||||||||||  ||||||||||||||| || |||||||  || |||| |||||||||| ||| |||||||| ||||    
T  32677578 catatttcaagacaaattagtagtattaattaggggtatgtttagaaaaaaacataataaatgtatctagtaatttgaaaa 32677658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 35178956 - 35179016
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatg 237  Q
    |||||||||||| ||| |||  |||||||||| || |||||||| ||||||||||||||||    
T  35178956 catatttcaagataagttagcggtattaattaggggtatgtttaggaaaaaataataaatg 35179016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 2917102 - 2917023
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaag 256  Q
    |||||| |||||||| |||||||||||||||  ||||| ||||| |||| |||||| ||| |||| |||||||| |||||    
T  2917102 atattttaagacaagttagtagtattaattagtgatatttttaaaaaaataataattaatacatctagtaatttgaaaag 2917023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 6444532 - 6444485
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaaaataataaatgcatc 241  Q
    ||||||||||||||| || ||||||| | |||||||||||||||||||    
T  6444532 tagtagtattaattagggttatgtttgaaaaaaaataataaatgcatc 6444485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 43119371 - 43119267
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaa----aaataataaatgcatcaagtaatttaaaaaggggtttacgtttaggg 272  Q
    ||||||||||||  | ||| |||||||||||| |||| |||||| ||||    ||||||||||| |||| |||||||| ||||| | ||||  |||||||    
T  43119371 catatttcaagattatatattagtattaattaaggatgtgtttaggaaataaaaaataataaatacatctagtaatttgaaaagagatttatatttaggg 43119272  T
Q  273 acaaa 277  Q
    |||||    
T  43119271 acaaa 43119267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 3237686 - 3237740
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagt 94  Q
    |||||||||||||||||||| ||| |||  ||||||||||||| ||| |||||||    
T  3237686 cctccgtcccttaatgtaggtacctattatctttttcacattttttaagaaaagt 3237740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 42250880 - 42250800
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaata---ataaatgcatcaagtaatttaaaaa 255  Q
    ||||||||||||||| || ||||||||||||   |||||||||  ||||||||   ||||||| ||| |||||||||||||    
T  42250880 atatttcaagacaagttaatagtattaattagaaatatgtttagaaaaaaataataataaatgtatctagtaatttaaaaa 42250800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 3326827 - 3326884
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataa 234  Q
    |||||||||||| ||  ||||||||||||||| || ||||||||  ||||||||||||    
T  3326827 catatttcaagataacgtagtagtattaattaggggtatgtttagaaaaaaataataa 3326884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 3645426 - 3645531
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||| |||| ||||||||||||||| || |||||||| ||| ||  || ||||| ||| | |||||| |||||||  |||| |||||||| ||    
T  3645426 catatttcaaggcaagttagtagtattaatta-gggtatgtttatgaagaa--aaaaaatgtatctaataatttgaaaagggacttacatttagggataa 3645522  T
Q  277 aaataaaat 285  Q
    ||| |||||    
T  3645523 aaagaaaat 3645531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 17251101 - 17251044
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    |||||||| ||||||||||| | | |||| ||||||||||||| ||| ||||||||||    
T  17251101 cctccgtctcttaatgtaggtatctattgtctttttcacattttttaagaaaagttgt 17251044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 31644580 - 31644527
Alignment:
Q  42 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagtt 95  Q
    ||||||| |||||||||||| |||||| |||||||||||||  || ||||||||    
T  31644580 tccgtcctttaatgtaggcatccattgtctttttcacattttataagaaaagtt 31644527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 41865681 - 41865738
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    ||||| |||||||||||| || ||  |||| |||||||||||||||| ||||||||||    
T  41865681 cctccttcccttaatgtaagccccttttgcttttttcacatttcttaagaaaagttgt 41865738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 1e-30; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 51787874 - 51787982
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||||||| |||||  |||| ||||||    
T  51787874 catatttcaagacaaaataatagtattaattagggatatgtttaggaaaaaataataaatgtatctagtaatttaaaaaggagtttatatttaaggacaa 51787973  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  51787974 aaataaaat 51787982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 54359786 - 54359894
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||| |||||||| ||||| ||||||| ||||  |||||    
T  54359786 catatttcaagacaagatagtagtattaattaggtgtatgtttaggaaaaaataataaatgcatctagtaatttgaaaagtggtttacatttaaagacaa 54359885  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  54359886 aaataaaat 54359894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 52552513 - 52552407
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||||| ||| | |||||||||||||| ||||  |||||||||||    
T  52552513 catatttcaagataagttagtagtattaattaggggtatgtttaagaaaaaataataaatgtatctaataatttaaaaagggatttatatttagggacaa 52552414  T
Q  277 aaataaa 283  Q
    |||||||    
T  52552413 aaataaa 52552407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 177 - 282
Target Start/End: Complemental strand, 20262396 - 20262292
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||| ||||||||||||||||||||| || |||||||||||||||| |||||||||||  |||||||| |||| |||||||| |||||||||||    
T  20262396 catatttcaaaacaagatagtagtattaattaagggtatgtttaagaaaaaa-aataaatgcatttagtaatttgaaaatgggtttacatttagggacaa 20262298  T
Q  277 aaataa 282  Q
    ||||||    
T  20262297 aaataa 20262292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 24072870 - 24072979
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||||| ||||||||||||| || |||||||| ||||| ||||||||||||||| |||||||| ||||||||||||  |||| |||||    
T  24072870 catatttcaagacaagatggtagtattaattaagggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaaggggtttatatttatggaca 24072969  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  24072970 aaaataaaat 24072979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 40411345 - 40411236
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||||||||||||||| || ||||||||| || |||||||||||||||| ||||||||||||| |||||||| |||||| ||||||  |||||||||    
T  40411345 catatttcaagacaagataataatattaattaggggtatgtttaagaaaaaaataataaatgcatctagtaatttgaaaaggagtttacaattagggaca 40411246  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  40411245 aaaataaaat 40411236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 33246499 - 33246391
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| ||||||||||||||| |  ||||||||  ||||||||||||||||||| |||||||| |||| | |||||| |||||||||||    
T  33246499 catatttcaagacaagttagtagtattaattaggagtatgtttagaaaaaaataataaatgcatctagtaatttgaaaaagagtttacatttagggacaa 33246400  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  33246399 aaataaaat 33246391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 25477328 - 25477437
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||||||||||||||||||| || |||||||| | ||||||||||||||||||| |||||||| ||||   || ||| ||||||||||    
T  25477328 catatttcaagacaagatagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaataagtatacatttagggaca 25477427  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  25477428 aaaataaaat 25477437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 30153224 - 30153119
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| |||||||||||||||  | |||||||| |||||||||||||||||||| | ||||||||||| || ||||| ||||| |||||    
T  30153224 catatttcaagacaagttagtagtattaattagag-tatgtttaggaaaaaataataaatgcatctaataatttaaaaatggatttacatttagagacaa 30153126  T
Q  277 aaataaa 283  Q
    |||||||    
T  30153125 aaataaa 30153119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 52198729 - 52198623
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||| ||||| ||||||||||||||| || |||||||| ||||||| ||||||||| ||| |||||||| ||||||||||||| |||||||||||    
T  52198729 atatttcaaaacaagttagtagtattaattaggggtatgtttaggaaaaaaataataaatgtatctagtaatttgaaaaggggtttacatttagggacaa 52198630  T
Q  277 aaataaa 283  Q
    || ||||    
T  52198629 aactaaa 52198623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 41945775 - 41945666
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||||||||| |||||| || |  |||||||| ||||||| ||||||||||||  |||||||| ||||||| ||||| ||||||||||    
T  41945775 catatttcaagacaagatagtaatattaagtaggagtatgtttaggaaaaaaataataaatgcatatagtaatttgaaaagggatttacatttagggaca 41945676  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  41945675 aaaataaaat 41945666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 52226122 - 52226226
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa--aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||  ||||||||||||||| |||||||| |||| | |||||| |||| ||||    
T  52226122 catatttcaagacaagttagtagtattaattaggggtatgtttaagaaaaataataataaatgcatctagtaatttgaaaatgtgtttacatttaaggac 52226221  T
Q  275 aaaaa 279  Q
    |||||    
T  52226222 aaaaa 52226226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 43800911 - 43801055
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| | ||||||||||||| || ||| |||| ||||| ||||||||||| ||| |||||||| ||| ||||||||| ||||||||||    
T  43800911 catatttcaagacaagttggtagtattaattaggggtatatttaggaaaataataataaatgtatctagtaatttgaaagggggtttacatttagggaca 43801010  T
Q  276 aaaataaaat---------gcttagatatagggacggagggagta 311  Q
    |||||||| |         ||||||||||||||||||||||||||    
T  43801011 aaaataaagtcaaatgggggcttagatatagggacggagggagta 43801055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 178 - 285
Target Start/End: Original strand, 31917481 - 31917587
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||| |||| ||||||||||||||||||| || |||||||| |||||||| ||||||||||| |||||||| |||| |||||||| |||| ||| |||    
T  31917481 atattttaagataagatagtagtattaattaggg-tatgtttaggaaaaaatcataaatgcatctagtaatttgaaaaagggtttacatttaaggataaa 31917579  T
Q  278 aataaaat 285  Q
    ||||||||    
T  31917580 aataaaat 31917587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 51918658 - 51918548
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggt--ttacgtttagggac 274  Q
    |||||||||||||||| ||  ||||||||||| || |||||| | |||||||||||||||||||| |||||||| ||||||| |  |||| |||||||||    
T  51918658 catatttcaagacaagttaacagtattaattaagggtatgttgaggaaaaaataataaatgcatctagtaatttgaaaagggataattacatttagggac 51918559  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  51918558 aaaaataaaat 51918548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 5448765 - 5448905
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||| | | |||||||||||||||||| |||||||  | ||||| ||||||| |||| | ||||||| || ||||||||| |||||||||||    
T  5448765 catatttcaagatatgttagtagtattaattatgggtatgttt--ggaaaaaaaataaatacatctaataatttagaagggggtttacatttagggacaa 5448862  T
Q  277 aaataaaat--------gcttagatatagggacggagggagta 311  Q
    |||||||||        ||||||||||||||||||||||||||    
T  5448863 aaataaaatcaaacggggcttagatatagggacggagggagta 5448905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 43509187 - 43509292
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaa--aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||||||||||  ||||||||||||||| || ||| ||||||||||  ||||||||||||||| | |||||| |||||| |||||| ||||||||||||    
T  43509187 atttcaagacaaattagtagtattaattaggggtatctttaagaaaaaaaataataaatgcatctaataatttgaaaaggagtttacatttagggacaaa 43509286  T
Q  278 aataaa 283  Q
    ||||||    
T  43509287 aataaa 43509292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 177 - 280
Target Start/End: Original strand, 8246351 - 8246455
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||  || |||||||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||  |||||||| |||| |||||    
T  8246351 catatttcaagacaaattaatagtattaattatgaatatgtttaggaaaaaaataataaatacatctagtaatttaaaagagggtttacatttatggaca 8246450  T
Q  276 aaaat 280  Q
    |||||    
T  8246451 aaaat 8246455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 177 - 280
Target Start/End: Original strand, 8250480 - 8250584
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||  || |||||||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||  |||||||| |||| |||||    
T  8250480 catatttcaagacaaattaatagtattaattatgaatatgtttaggaaaaaaataataaatacatctagtaatttaaaagagggtttacatttatggaca 8250579  T
Q  276 aaaat 280  Q
    |||||    
T  8250580 aaaat 8250584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 7002286 - 7002385
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||| ||| ||| ||||||||||| || |||||||| ||||||||||||||| |||| |||||||| ||||| ||||||  |||||||||||    
T  7002286 catatttcaagataagttagcagtattaattaagggtatgtttaggaaaaaataataaatacatctagtaatttgaaaagaggtttatatttagggacaa 7002385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 10602212 - 10602105
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||| ||||  ||||||||||||||| |  |||||||| ||||||| |||| |||||||| ||||||||||||||| |||||| |||| |||||    
T  10602212 catatttcaaaacaaattagtagtattaattaagagtatgtttaggaaaaaaataatgaatgcatctagtaatttaaaaaggagtttacatttatggaca 10602113  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  10602112 aaaataaa 10602105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 37625127 - 37625017
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||||||||  || ||||||||||||||| |  |||||||| ||||||  |||||||||||||| | |||||| ||||| ||||||| |||||||||    
T  37625127 catatttcaagattagttagtagtattaattaagagtatgtttaggaaaaataataataaatgcatctaataatttgaaaagaggtttacatttagggac 37625028  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  37625027 aaaaataaaat 37625017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 5536610 - 5536696
Alignment:
Q  200 tattaattatggatatgtttaaga-aaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||| || |||||||| || |||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||    
T  5536610 tattaattaggggtatgtttaggagaaaaataataaatgcatctagtaatttgaaaagaggtttacatttagggacaaaaataaaat 5536696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 5168082 - 5168191
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||| ||||| ||||||||||||||| || |||||||| | |||||| || ||||||||| |||||| | |||| |||||||| ||||| ||||    
T  5168082 catatttcaatacaagctagtagtattaattaagggtatgtttagaaaaaaaaaaaaaaatgcatctagtaatatgaaaacgggtttacatttagagaca 5168181  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  5168182 aaaataaaat 5168191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 13096544 - 13096436
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||| |||||||| || |||||||||||| || |||||||| ||||||  |||||||||| ||| |||||||| ||||||||||| | ||||||||     
T  13096544 catattttaagacaagttactagtattaattaagggtatgtttaggaaaaataataataaatgtatctagtaatttgaaaaggggtttgcatttagggat 13096445  T
Q  275 aaaaataaa 283  Q
    |||||||||    
T  13096444 aaaaataaa 13096436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 16070534 - 16070643
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||| ||||| ||||||||||||||| || || ||||  | |||||||||||||| |||| |||||||||||| ||||||||| |||||||| |    
T  16070534 catatttcaatacaagttagtagtattaattaggggtacgttttgggaaaaaataataaatacatctagtaatttaaaatggggtttacatttagggata 16070633  T
Q  276 aaaataaaat 285  Q
    ||||| ||||    
T  16070634 aaaattaaat 16070643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 22651571 - 22651676
Alignment:
Q  181 tttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaa 279  Q
    |||||||||||| || || ||||||||| || |||||||| ||||| ||||||||||||||| |||||||| |||||| |||||| |||| ||| |||||    
T  22651571 tttcaagacaagttattaatattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaaggagtttacatttaaggataaaaa 22651670  T
Q  280 taaaat 285  Q
    ||||||    
T  22651671 taaaat 22651676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 31840200 - 31840305
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||   || |||||||||||| |||||||||||  |||| || ||||||||||| | |||||| ||||||||||||  ||||||||||||    
T  31840200 atatttcaagacagattaatagtattaattagggatatgtttagaaaaatatgataaatgcatctaataatttgaaaaggggtttatatttagggacaaa 31840299  T
Q  278 aataaa 283  Q
    ||||||    
T  31840300 aataaa 31840305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 46729408 - 46729517
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||||||| ||||||  | |||||||||| || |||||||  ||||| ||||||||||||||| | |||||||||||| | ||||| ||||||||||    
T  46729408 catatttcaaggcaagatgatggtattaattaggggtatgtttgggaaaaaaataataaatgcatctaataatttaaaaagagatttacatttagggaca 46729507  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  46729508 aaaataaaat 46729517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 21171827 - 21171935
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||| ||| ||||||||||||||| || ||||||||  ||||||||||||||| ||  |||||||| |||||  |||||| ||||| ||||     
T  21171827 catatttcaagataagttagtagtattaattaggggtatgtttagaaaaaaataataaatgtatatagtaatttgaaaagaagtttacatttagagacat 21171926  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  21171927 aaataaaat 21171935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 34543825 - 34543917
Alignment:
Q  194 tagtagtattaattatggata-tgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||| |||||  ||||||  ||||| ||||||| |||||    
T  34543825 tagtagtattaattatggataatgtttaggaaaaaataataaatgcatctagtaatttgaaaagaagtttacaattaggaacaaaaagaaaat 34543917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 189 - 285
Target Start/End: Original strand, 50782888 - 50782983
Alignment:
Q  189 caagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||| || ||||||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| |||  |||||| |||||||||||||    
T  50782888 caagataataatattaattaggggtatgtttaggaaaaaataataaatgcatctagtaacttaaaaagggg-ttatatttaggaacaaaaataaaat 50782983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 20116553 - 20116698
Alignment:
Q  177 catatttcaagacaagatagtagtattaa-ttatggatatgtttaagaaaaaataa-taaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||||||||||||||| ||||||||| ||| || ||||||||   |||||||| |||||||||| |||||||| ||||||||||||  || ||||||    
T  20116553 catatttcaagacaagataatagtattaaattaggggtatgtttagacaaaaataaataaatgcatctagtaatttgaaaaggggtttatattaagggac 20116652  T
Q  275 aaaaataaaa---------tgcttagatatagggacggagggagta 311  Q
    ||| | ||||         |||||||||||||||||||||||||||    
T  20116653 aaagacaaaatcaaacgggtgcttagatatagggacggagggagta 20116698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 22750844 - 22750735
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||  ||||||||||||||| || ||||| || ||||| ||||||||||||||| | |||||| |||| || ||||  |||||| |||    
T  22750844 catatttcaagacaacttagtagtattaattaggggtatgtataggaaaataataataaatgcatctactaatttgaaaaaggatttagatttaggaaca 22750745  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  22750744 aaaataaaat 22750735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 194 - 311
Target Start/End: Complemental strand, 31937080 - 31936952
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa-------- 283  Q
    ||||| ||||||||| |  |||||||| ||||||  |||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||            
T  31937080 tagtactattaattaggagtatgtttaggaaaaataataataaatgcatctagtaatttgaaaagggatttacatttagggacaaaaataaagttaaata 31936981  T
Q  284 -atgcttagatatagggacggagggagta 311  Q
     ||||||||||||||||||||||| ||||    
T  31936980 gatgcttagatatagggacggaggaagta 31936952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 56373346 - 56373273
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaattt 250  Q
    |||||||||||||||| || |||||||||||| || || ||||| |||||||||||||||||||| ||||||||    
T  56373346 catatttcaagacaagttattagtattaattaagggtacgtttaggaaaaaataataaatgcatccagtaattt 56373273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 5932992 - 5933096
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    ||||||||||||| ||||| |||||||||||  |||||||||| |||||| ||||| |||||| |||||||| |||||   ||||  |||||||||||||    
T  5932992 atttcaagacaagttagtattattaattatgagtatgtttaagaaaaaaaaaataattgcatctagtaatttgaaaagaaatttatatttagggacaaaa 5933091  T
Q  279 ataaa 283  Q
    |||||    
T  5933092 ataaa 5933096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 39414337 - 39414437
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||| |||| |||||||||| || |||||||| ||||| |||||||||||  || |||||||| ||||||||||||  ||||||||||    
T  39414337 catatttcaagataagttagtggtattaattaggggtatgtttaggaaaaaaataataaatgtgtctagtaatttgaaaaggggtttatatttagggaca 39414436  T
Q  276 a 276  Q
    |    
T  39414437 a 39414437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 12624801 - 12624908
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||| |||||||  |||||| |||||| | || |||||||| ||||| |||| |||||||||| |||||||| |||||| |||||| |||| |||||||    
T  12624801 tattttaagacaaattagtaggattaatgaggggtatgtttaggaaaataatagtaaatgcatctagtaatttgaaaaggagtttacatttaaggacaaa 12624900  T
Q  278 aataaaat 285  Q
    ||||||||    
T  12624901 aataaaat 12624908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 54438613 - 54438722
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta--agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||| |||||||||||||||||||||  |  |||||||  | |||||||||||||||| || | |||||| ||||| | ||||| |||||||||    
T  54438613 catatttcaaaacaagatagtagtattaattagaggcatgtttaggaaaaaaaataataaatgc-tctactaatttgaaaagagatttacatttagggac 54438711  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  54438712 aaaaataaaat 54438722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 5448628 - 5448678
Alignment:
Q  41 ctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaa 91  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  5448628 ctccgtcccttaatgtaggcatccattgcctttttcacatttcttaagaaa 5448678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 25477195 - 25477249
Alignment:
Q  45 gtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  25477195 gtcccttaatgtaggcatccattgcttttttcacatttcttaagaaaagttgtca 25477249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 31486592 - 31486698
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||| |||| | ||| |||||||||  |||||||||| ||||| ||||||||||| ||  |||||||| ||||||||||||| ||||  |||||    
T  31486592 atatttcaaggcaagttggtaatattaattaaagatatgtttaggaaaataataataaatgaatttagtaatttgaaaaggggtttacatttaaagacaa 31486691  T
Q  277 aaataaa 283  Q
    |||||||    
T  31486692 aaataaa 31486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 52676132 - 52676218
Alignment:
Q  185 aagacaagatagtagtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttag 270  Q
    |||||||| || |||||||||||| ||||||| ||| | |||||||||||||||||||   |||||||||||||||||||| |||||    
T  52676132 aagacaagttaatagtattaattaaggatatgcttagaaaaaaaataataaatgcatcttataatttaaaaaggggtttacatttag 52676218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 10541242 - 10541181
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaa 255  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||| | |||||||||||    
T  10541242 tagtagtattaattagggatatgtttaggaaaaaataataaatgaatctaataatttaaaaa 10541181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 20185658 - 20185553
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||  ||||||||||||||| || |||||||||||||||| |  |||||| || ||||||||||||| | |||||| |||||  | ||    
T  20185658 catatttcaagacaaattagtagtattaattaagggtatgtttaagaaaaaaga--aaatgcttctagtaatttaaaaa-gagtttacatttagaaaaaa 20185562  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  20185561 aaataaaat 20185553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 39237590 - 39237481
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaattt-aaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||||| || ||||||||| || |||||||| | |||||||||||||| |||| |||||||| ||||| || ||||  ||||| ||||    
T  39237590 atatttcaagacaagataatattattaattaggggtatgtttaggaaaaaaataataaatacatctagtaatttgaaaaaaggttttatatttagagaca 39237491  T
Q  276 aaaataaaat 285  Q
     |||||||||    
T  39237490 gaaataaaat 39237481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 44812609 - 44812500
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||| |||| |||||||||||||||| || ||| |||| | ||||||||||||||||||  | || ||||||||||| ||| |  ||| |||||    
T  44812609 catatttcaaaacaaaatagtagtattaattaggggtatctttaggaaaaaaataataaatgcatataatactttaaaaagggattttcaattatggaca 44812510  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  44812509 aaaataaaat 44812500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 50782742 - 50782802
Alignment:
Q  39 tcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||| |||||||||| |  ||||||||||||||||| ||||||||||||    
T  50782742 tcctccgtcccttaatataggcacccaatatctttttcacatttcttaagaaaagttgtca 50782802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 16070396 - 16070447
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaa 91  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  16070396 cctccgtcccttaatgtaggcacctattgtctttttcacatttcttaagaaa 16070447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 20262534 - 20262475
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||| |||||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||    
T  20262534 cctctgtcccttaatatagacactcattgcctttttcacatttcttaagaaaagttgtca 20262475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 20291443 - 20291549
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||| ||||||| |||||||| |||  |||||||| ||||| | ||||  ||||  ||||    
T  20291443 catatttcaagataagttagtagtattaatta-ggatatgtttaggaaaaaagtaataaatacatttagtaatttgaaaagagatttatatttaaagaca 20291541  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  20291542 aaaataaa 20291549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 43800763 - 43800814
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaa 91  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  43800763 cctccgtcccttaacgtaggcacccattgcctttttcacatttgttaagaaa 43800814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 32236934 - 32237043
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta-agaaaaaataataaatgca--tcaagtaatttaaaaaggggtttacgtttaggga 273  Q
    |||||||||| | ||  ||||| ||||||||| || |||||||| | |||||||||||||||||  || |||||||||||| ||| ||||  ||||||||    
T  32236934 catatttcaatataaattagtaatattaattaggggtatgtttagaaaaaaaataataaatgcacatctagtaatttaaaaggggatttatatttaggga 32237033  T
Q  274 caaaaataaa 283  Q
    ||||||||||    
T  32237034 caaaaataaa 32237043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 51787736 - 51787794
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtc 98  Q
    ||||||| ||||||||||||||| |||| | |||||||||||||||| |||||||||||    
T  51787736 cctccgttccttaatgtaggcactcattccatttttcacatttcttaagaaaagttgtc 51787794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 26203235 - 26203343
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa--aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||| |||||  |||||||| ||  ||||||| |||||  ||||||||||| ||| | |||||| |||||| |||||| |||| ||||||    
T  26203235 tatttcaagacaagttagtatgattaattaggggaatgtttaggaaaaaaaataataaatgtatctaataatttgaaaaggagtttacatttaaggacaa 26203334  T
Q  277 aaataaaat 285  Q
    || ||||||    
T  26203335 aagtaaaat 26203343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 38136458 - 38136560
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||| |||| ||||||||||||||| || |||||| | |||||||    ||||| ||| |||||||| |||||| |||||| |||| ||| ||    
T  38136458 catatttcaaggcaagttagtagtattaattaggggtatgttcaggaaaaaa----aaatgtatctagtaatttgaaaaggagtttacatttatggataa 38136553  T
Q  277 aaataaa 283  Q
    |||||||    
T  38136554 aaataaa 38136560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 52552649 - 52552592
Alignment:
Q  42 tccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||||||||||| |||| ||||||| ||| ||| ||||||||||||    
T  52552649 tccgtcccttaatgtaggcacccaatgcccttttcacgttttttaagaaaagttgtca 52552592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 36513280 - 36513201
Alignment:
Q  200 tattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||||||| ||||||||||| ||||||  |||||||||||||| | |||||| |||||  |||||| ||||||||||||    
T  36513280 tattaattagggatatgtttaggaaaaataataataaatgcatccaataatttgaaaagatgtttacatttagggacaaa 36513201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 5536474 - 5536521
Alignment:
Q  52 aatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||| ||||||||||||||||||| ||||| ||||||    
T  5536474 aatgtaggcacccatagcctttttcacatttcttaagaaaaattgtca 5536521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 20016624 - 20016711
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggttta 263  Q
    |||||||||||||||| |||||| ||||||||    |||||||| ||||| ||||||||||| ||| |||||||| ||||| ||||||    
T  20016624 catatttcaagacaagttagtagcattaattaaaagtatgtttatgaaaaaaataataaatgaatctagtaatttgaaaagaggttta 20016711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 20293850 - 20293960
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta--agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||| ||||| |||||||||||| || || ||||||||  | ||||||||||||||||||| | |||||| |||| | ||| || |||| | |     
T  20293850 catatttcaatacaagttagtagtattaagtaagggtatgtttaggaaaaaaaataataaatgcatctaataatttgaaaatgagttcacatttatgaaa 20293949  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  20293950 aaaaataaaat 20293960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 34643497 - 34643576
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaa-aaaataataaatgcatcaagtaatttaaaaa 255  Q
    |||||||||||| ||  ||||||||||||||| || ||||||| |||| |||| |||||||||||| |||||||| ||||    
T  34643497 catatttcaagataaattagtagtattaattaagggtatgttttagaagaaaaaaataaatgcatctagtaatttgaaaa 34643576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 48472496 - 48472389
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||||||| |||||||||||| || ||||||    ||||||||||||| ||||  | |||||| ||||   |||||| ||||  ||||||    
T  48472496 atatttcaagacaagataatagtattaattaggggtatgttaggaaaaaaataataaaagcatttattaatttgaaaaaaagtttacatttaaagacaaa 48472397  T
Q  278 aataaaat 285  Q
    ||||||||    
T  48472396 aataaaat 48472389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 20792141 - 20792203
Alignment:
Q  223 aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||||||||| ||| |||||||||||||| | ||||| ||||||  ||||||||||||    
T  20792141 aaaaaataataaatgtatctagtaatttaaaaagagatttacatttaggatcaaaaataaaat 20792203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 24072745 - 24072791
Alignment:
Q  53 atgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||||    
T  24072745 atgtaggcacccattgtcttttttacatttcttaagaaaagttgtca 24072791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 39237733 - 39237670
Alignment:
Q  40 cctccgtcccttaatgtaggcac----ccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||||||||||    |||||| ||||||||||||| ||| ||||||||||||    
T  39237733 cctccgtcccttaatgtaggcacgcatccattgtctttttcacattttttaagaaaagttgtca 39237670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 56217055 - 56217001
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataa 231  Q
    |||||||||||| |||||||||||||||||||  | |||||||| ||||||||||    
T  56217055 catatttcaagataagatagtagtattaattagaggtatgtttaggaaaaaataa 56217001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 56217160 - 56217106
Alignment:
Q  43 ccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    ||||||||||| |||| |||||||||| |||||||||||| ||| ||||||||||    
T  56217160 ccgtcccttaacgtagacacccattgcttttttcacattttttaagaaaagttgt 56217106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 14602656 - 14602554
Alignment:
Q  178 atatttcaagacaagatagtagtat--taattatggatatgtttaagaaaaa---ataataaatgcatcaagtaatttaaaaaggggtttacgtttaggg 272  Q
    |||||| |||| ||| |||||||||  |||||| || ||||||||  |||||   |||||||||||||| |||||||| ||||||||||||| |||| ||    
T  14602656 atattttaagataagttagtagtatattaattaggggtatgtttagaaaaaatatataataaatgcatctagtaatttgaaaaggggtttacatttaagg 14602557  T
Q  273 aca 275  Q
    |||    
T  14602556 aca 14602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 48472645 - 48472576
Alignment:
Q  31 attatgcttcctccgtcccttaatgtaggcacccattgcctttttcaca-tttcttaggaaaagttgtca 99  Q
    ||||| |||| || ||||||||||||||||| |||||| |||||||||| ||| ||| ||||||||||||    
T  48472645 attatacttcatctgtcccttaatgtaggcatccattgtctttttcacatttttttaagaaaagttgtca 48472576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 50438269 - 50438208
Alignment:
Q  223 aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaa 284  Q
    |||||||||| ||||| |   ||||||| ||||||||||||| |||||||||||||||||||    
T  50438269 aaaaaataattaatgcgtgttgtaatttgaaaaggggtttacatttagggacaaaaataaaa 50438208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 54701272 - 54701189
Alignment:
Q  203 taattatggatatgtttaagaaaaaataataa---atgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    |||||| || |||||||| |||||||||||||   ||| ||| |||||||| ||||| ||||||| |||| |||||||||||||    
T  54701272 taattaagggtatgtttaggaaaaaataataataaatgtatctagtaatttgaaaagaggtttacatttatggacaaaaataaa 54701189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 280
Target Start/End: Original strand, 31552271 - 31552375
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||| |||||||   |||||||||||||| || |||||||| | |||||| |||||||||| | | ||||||||||||| |||||  ||||| || |    
T  31552271 catattttaagacaaatgagtagtattaattaggggtatgtttagaaaaaaaaaaataaatgcaaccaataatttaaaaaggagtttatatttagagaaa 31552370  T
Q  276 aaaat 280  Q
    |||||    
T  31552371 aaaat 31552375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 283
Target Start/End: Complemental strand, 39196988 - 39196928
Alignment:
Q  223 aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    ||||||||||||||||||| |||||||| ||||    ||||| ||||||||||||||||||    
T  39196988 aaaaaataataaatgcatctagtaatttgaaaaataatttacatttagggacaaaaataaa 39196928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 54438481 - 54438533
Alignment:
Q  46 tcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtc 98  Q
    |||||||||||||| | |||||| ||||||||||||||||| ||||| |||||    
T  54438481 tcccttaatgtaggtatccattgtctttttcacatttcttaagaaaaattgtc 54438533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 19654531 - 19654641
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta--agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||| ||||| ||||||||||| ||| |  ||||||||  | ||||||||||||| ||||  | |||||| |||| | |||||| ||||||||     
T  19654531 catatttcaaaacaagttagtagtattagttaggagtatgtttaggaaaaaaaataataaacgcatttaataatttgaaaaagagtttacatttagggat 19654630  T
Q  275 aaaaataaaat 285  Q
     ||||||||||    
T  19654631 gaaaataaaat 19654641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 41920040 - 41919989
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa 228  Q
    |||||||||||| ||| ||||||||||||||| || ||||||||| ||||||    
T  41920040 catatttcaagataagttagtagtattaattaggggtatgtttaaaaaaaaa 41919989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 52225984 - 52226043
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||| |||||||||| ||| |||| ||||||||||||| ||| |||| |||||||    
T  52225984 cctccgtcctttaatgtaggtacctattgtctttttcacattttttaagaaatgttgtca 52226043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 22750982 - 22750924
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtc 98  Q
    ||||||||||||||||||  | | | |||| |||||||||||||||| |||||||||||    
T  22750982 cctccgtcccttaatgtaatccctctttgcatttttcacatttcttaagaaaagttgtc 22750924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 32107948 - 32108029
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa--aataataaatgcatcaagtaatttaaaaag 256  Q
    ||||||| |||| ||  ||||| ||||||| | |||||||||||||||||  |||||||||||  || ||||||||||||||    
T  32107948 catattttaagataaattagtaatattaataaaggatatgtttaagaaaaataataataaatgtgtctagtaatttaaaaag 32108029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 46729268 - 46729329
Alignment:
Q  37 cttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||| ||||||||||||||| ||  ||||| ||||||||||||| ||| ||||||||||||    
T  46729268 cttccttcgtcccttaatgtagacattcattgtctttttcacattt-ttaagaaaagttgtca 46729329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 48609522 - 48609448
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaa-aaaataataaatgcatcaagtaattt 250  Q
    |||||||||| || || |||||||||||||||  | ||| |||||||| |||||||||||| |||| ||||||||    
T  48609522 catatttcaaaactagttagtagtattaattagaggtatatttaagaaaaaaataataaatacatctagtaattt 48609448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 5416816 - 5416772
Alignment:
Q  233 aaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||||||| ||||||||||||||| | |||| ||||||||||||    
T  5416816 aaatgcatctagtaatttaaaaaggagcttacatttagggacaaa 5416772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 39813891 - 39813851
Alignment:
Q  245 taatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    |||||| |||||| |||||| ||||||||||||||||||||    
T  39813891 taatttgaaaaggagtttacatttagggacaaaaataaaat 39813851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 40411746 - 40411686
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgccttttt-cacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||||||| |||  ||||  ||||| ||||||||||| ||||||||||||    
T  40411746 cctccgtcccttaatgtagccacatattgttttttttcacatttcttaagaaaagttgtca 40411686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 30248965 - 30249071
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| ||||||||||||||| || |||||||| |||||||||||||||| ||| |||||||| ||||  ||||||| |||||||||||    
T  30248965 catatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaaataataaatggatctagtaatttgaaaataggtttacatttagggacaa 30249064  T
Q  277 aaataaa 283  Q
    |||||||    
T  30249065 aaataaa 30249071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 34513221 - 34513115
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||||||||||||||||| |||||| || ||||||||  ||||||||||||||||||| |||||||| |||||| |||||| |||||| ||||    
T  34513221 catatttcaagacaagatagtagtaataattaggggtatgtttagaaaaaaataataaatgcatctagtaatttgaaaaggagtttacatttaggaacaa 34513122  T
Q  277 aaataaa 283  Q
    |||||||    
T  34513121 aaataaa 34513115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 31945915 - 31945806
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||| |||||||| |||||  |||||| ||||| ||||    
T  31945915 catatttcaagacaagttagtagtattaattagggatatgtttaggaaaaaaataataaatgcatctagtaatttgaaaagaagtttacatttagagaca 31945816  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  31945815 aaaataaaat 31945806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 28238316 - 28238216
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| ||||||||||||||| || |||||||| |||||||||||||||||||| |||||||| |||| || ||||| |||| ||||||    
T  28238316 catatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaaataataaatgcatctagtaatttgaaaaaggatttacatttaaggacaa 28238217  T
Q  277 a 277  Q
    |    
T  28238216 a 28238216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 19839036 - 19839143
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||| ||  |||||| |||||||| || |||||||| ||||| ||||||||||||||| |||||||| |||||| |||||| ||||||||||||    
T  19839036 tatttcaagataaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagtttacatttagggacaaa 19839135  T
Q  278 aataaaat 285  Q
    ||||||||    
T  19839136 aataaaat 19839143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 1763919 - 1764060
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    ||||||||||||| ||||||||||||||| || |||||||| ||||| ||||||||||||||| | ||||||  ||||| |||||  ||||| |||||||    
T  1763919 atttcaagacaagttagtagtattaattaagggtatgtttaggaaaataataataaatgcatctaataatttggaaaggtgtttatatttagagacaaaa 1764018  T
Q  279 ataaaa---------tgcttagatatagggacggagggagta 311  Q
    ||||||         |||||||||||||||||||||||||||    
T  1764019 ataaaatcaaatgagtgcttagatatagggacggagggagta 1764060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 9461396 - 9461503
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||| | |||||| ||||||||||| |||||||| | ||||||||||||||||||| | |||||| |||  |||||||| |||| |||||    
T  9461396 catatttcaagacaggttagtagaattaattatgggtatgtttagaaaaaaaataataaatgcatctaataatttgaaagagggtttacatttaaggaca 9461495  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  9461496 aaaataaa 9461503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 15981897 - 15982004
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa-ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| || ||||||||||||| | |||||||   ||||| |||||||||||||| |||||||| ||||  ||||||| ||||||||||    
T  15981897 catatttcaagacaagttaatagtattaattataggtatgttttgaaaaaatataataaatgcatctagtaatttgaaaaaaggtttacatttagggaca 15981996  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  15981997 aaaataaa 15982004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 16327226 - 16327334
Alignment:
Q  177 catatttcaagacaagatagt-agtattaattatggatatgtttaagaaaaa-ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||||||||| || | |||||||||||  | |||||||| |||||| |||||||||||||| |||||||| ||||||||||||  ||||| |||    
T  16327226 catatttcaagacaagttatttagtattaattagaggtatgtttaggaaaaatataataaatgcatctagtaatttgaaaaggggtttatatttagagac 16327325  T
Q  275 aaaaataaa 283  Q
    |||||||||    
T  16327326 aaaaataaa 16327334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 16350624 - 16350732
Alignment:
Q  177 catatttcaagacaagatagt-agtattaattatggatatgtttaagaaaaa-ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||||||||| || | |||||||||||  | |||||||| |||||| |||||||||||||| |||||||| ||||||||||||  ||||| |||    
T  16350624 catatttcaagacaagttatttagtattaattagaggtatgtttaggaaaaatataataaatgcatctagtaatttgaaaaggggtttatatttagagac 16350723  T
Q  275 aaaaataaa 283  Q
    |||||||||    
T  16350724 aaaaataaa 16350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 5895834 - 5895921
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggttta 263  Q
    ||||||||||||||||||||| |||||||||| ||  || |||| ||||||| ||||||||||||| |||||||| ||||||||||||    
T  5895834 catatttcaagacaagatagtggtattaattaggggcatatttaggaaaaaattaataaatgcatctagtaatttgaaaaggggttta 5895921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 16186673 - 16186782
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaat--aataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||||||||||||||||| |||||||||| |  |||||||| ||||||||  |||||||||||| |||||||| |||| |||||||  |||| ||||    
T  16186673 catatttcaagacaagatagtggtattaatta-gtgtatgtttaggaaaaaataaaataaatgcatctagtaatttgaaaaagggtttatatttaaggac 16186771  T
Q  275 aaaaataaaat 285  Q
    |||| ||||||    
T  16186772 aaaagtaaaat 16186782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 30465971 - 30465864
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||| ||||||||||||||| ||  ||||||| ||||||| ||||||||||||| |||||||| |||||  |||||| |||| | |||    
T  30465971 catatttcaagataagttagtagtattaattaaggggatgtttaggaaaaaaataataaatgcatctagtaatttgaaaagaagtttacatttatgaaca 30465872  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  30465871 aaaataaa 30465864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 31536115 - 31536225
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa--aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||||| ||| |||||||||||||||| | ||||| || |||||  ||||||||||||| | |||||||| ||||||||||||| || || |||    
T  31536115 catatttcaagataagttagtagtattaattataggtatgtataggaaaaaaaataataaatgcaactagtaatttgaaaaggggtttacattcagtgac 31536214  T
Q  275 aaaaataaaat 285  Q
    ||| |||||||    
T  31536215 aaatataaaat 31536225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 6791482 - 6791588
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    |||||||||||||||| | ||||||| || |  |||||||| ||||| ||||||||||||||| ||||| || ||||||||||||| ||||  |||||||    
T  6791482 atttcaagacaagataattgtattaactaggagtatgtttaggaaaaaaataataaatgcatctagtaagttgaaaaggggtttacatttaaagacaaaa 6791581  T
Q  279 ataaaat 285  Q
    |||||||    
T  6791582 ataaaat 6791588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 5895696 - 5895753
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||    
T  5895696 cctccgtcccttaatgtaggcatccattgtctttttcacatttcttaagaaaagttgt 5895753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 11302961 - 11303069
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaag--aaaaaataat-aaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||| |||||||||||||||| || ||||||||||  |||||||||| ||| ||||| ||| |||| |||||  |||||| |||| ||||||    
T  11302961 atttcaagacaaaatagtagtattaattaggggtatgtttaagaaaaaaaataataaaaagcatctagttatttgaaaagaagtttacatttaaggacaa 11303060  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  11303061 aaataaaat 11303069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 197451 - 197345
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaa---ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||| |||||||| |||||||||||||||  | ||| |||||||||||   |||||||| ||||| ||||||||||||||  |||||| |||| ||||||    
T  197451 attttaagacaagttagtagtattaattagaggtatatttaagaaaaataaataataaaggcatctagtaatttaaaaagaagtttacatttaaggacaa 197352  T
Q  277 aaataaa 283  Q
    |||||||    
T  197351 aaataaa 197345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 3729525 - 3729604
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaag 256  Q
    |||||||||||||||| ||||| ||||||||| |  ||||||||  ||||||||||||||||||| | ||||||||||||    
T  3729525 catatttcaagacaagttagtaatattaattaggagtatgtttagaaaaaaataataaatgcatctaataatttaaaaag 3729604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 3887945 - 3887866
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaa 255  Q
    |||||||||||||||| ||||||||||||||| || |||||||| | ||||||||||||||||||| | |||||| ||||    
T  3887945 catatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctaataatttgaaaa 3887866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 33607458 - 33607556
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||| || ||| ||| ||||||||||| || |||||||| ||||||| |||||||||||| |||||||| |||| | |||||  |||||||||||    
T  33607458 catatttcatgataagttagcagtattaattaggggtatgtttaggaaaaaa-aataaatgcatctagtaatttgaaaaagtgtttatatttagggacaa 33607556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 22410827 - 22410736
Alignment:
Q  195 agtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    |||||||||||||| || |||| ||| ||||||| |||||||||||||   | |||| |||| || ||||| ||||||||||||||||||||    
T  22410827 agtagtattaattaagggtatgcttaggaaaaaaataataaatgcatcttattatttgaaaaaggatttacatttagggacaaaaataaaat 22410736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 5191258 - 5191316
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaa 235  Q
    |||||||||||| ||| ||||||||||||||| |  ||||||| | |||||||||||||    
T  5191258 catatttcaagataagttagtagtattaattaggattatgtttgaaaaaaaataataaa 5191316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 180 - 263
Target Start/End: Complemental strand, 8644795 - 8644708
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataa----taaatgcatcaagtaatttaaaaaggggttta 263  Q
    |||| |||||||  ||||||||||||||| || ||||||||| |||||| ||    |||||||||| |||||||| ||||| ||||||    
T  8644795 attttaagacaatttagtagtattaattaggggtatgtttaaaaaaaaaaaaacaataaatgcatctagtaattttaaaagaggttta 8644708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 31487029 - 31486964
Alignment:
Q  213 tatgtttaagaaa-aaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||| |||| |||||||||||| ||| ||||||||||||| || ||||| |||| |||||||    
T  31487029 tatgtttaggaaagaaataataaatgtatctagtaatttaaaaaaggatttacatttaaggacaaa 31486964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 5084685 - 5084625
Alignment:
Q  37 cttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    |||||||||| | ||||| |||||| | |||| | ||||||||||||||| ||||||||||    
T  5084685 cttcctccgtactttaatataggcatctattgtccttttcacatttcttaagaaaagttgt 5084625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 1e-27; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 20945304 - 20945197
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||| |||||||| ||||||||||||||| || |||||||| ||||| ||||| ||||||||| |||||||| ||||||||||||| ||||||||||    
T  20945304 catattttaagacaagttagtagtattaattagggttatgtttaggaaaataataacaaatgcatctagtaatttgaaaaggggtttacatttagggaca 20945205  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  20945204 aaaataaa 20945197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 177 - 311
Target Start/End: Complemental strand, 29676743 - 29676601
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||||||||||||| |||||||||| || |||||||| | |||||||||||||||||  |||||||| ||| | ||||||| |||||||||||    
T  29676743 catatttcaagacaagatagtggtattaattaggggtatgtttagggaaaaataataaatgcat-tagtaatttgaaatgaggtttacatttagggacaa 29676645  T
Q  277 aaataaaa---------tgcttagatatagggacggagggagta 311  Q
    ||||||||         |||||||||||||||||||||||||||    
T  29676644 aaataaaatcaaatgagtgcttagatatagggacggagggagta 29676601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 42891524 - 42891627
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaa 279  Q
    |||| |||||||| |||| |||||||||| || |||||||| |||||||||||||||||||| |||||||| || |||||||||| ||||||||||||||    
T  42891524 atttaaagacaagttagtggtattaattaggggtatgtttaggaaaaaataataaatgcatctagtaatttgaagaggggtttacatttagggacaaaaa 42891623  T
Q  280 taaa 283  Q
    ||||    
T  42891624 taaa 42891627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 28477487 - 28477593
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||  ||||||||||||||| || ||| ||| ||||||||||||||||||||| |||||||| ||||| ||||||| ||||||| |||    
T  28477487 catatttcaagacaaattagtagtattaattaggggtatattttagaaaaaataataaatgcatctagtaatttgaaaagaggtttacatttaggggcaa 28477586  T
Q  277 aaataaa 283  Q
    |||||||    
T  28477587 aaataaa 28477593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 46048624 - 46048734
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatgga-tatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||||||||||||||||| ||||||| ||  |||||||| | ||||||||||||||||||| | |||||| ||||||||||||| |||||||||    
T  46048624 catatttcaagacaagatagtagtgttaattagggggtatgtttagaaaaaaaataataaatgcatctattaatttgaaaaggggtttacatttagggac 46048723  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  46048724 aaaaataaaat 46048734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 12077747 - 12077636
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa---taataaatgcatcaagtaatttaaaaaggggtttacgtttaggga 273  Q
    |||||||||| ||||||||| ||||||||||| || |||||||| |||||||   ||||||||||||| |||||||| ||||||||||||| |||| |||    
T  12077747 catatttcaaaacaagatagaagtattaattaggggtatgtttaggaaaaaaaattaataaatgcatctagtaatttgaaaaggggtttacatttaagga 12077648  T
Q  274 caaaaataaaat 285  Q
    ||||||||||||    
T  12077647 caaaaataaaat 12077636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 26517219 - 26517110
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| ||||||||||||||| || |||||||| | ||||||||||||||||||| ||||||||  ||| | |||||| ||||||||||    
T  26517219 catatttcaagacaagttagtagtattaattaggggtatgtttaggcaaaaaataataaatgcatctagtaatttgtaaaagagtttacatttagggaca 26517120  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  26517119 aaaataaaat 26517110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 41727242 - 41727133
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||||||||  ||||||||| || |||||||||||||||| ||||||||||||  |||||||||||||||||||||| |||| | |||    
T  41727242 catatttcaagacaagatagtgatattaattaggggtatgtttaagaaaaaaataataaatgcatttagtaatttaaaaaggggtttacatttaagaaca 41727143  T
Q  276 aaaataaaat 285  Q
    ||| ||||||    
T  41727142 aaagtaaaat 41727133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 180 - 278
Target Start/End: Complemental strand, 31531129 - 31531029
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||||||||||| ||||||||||||||| || |||||||| ||||||  |||||||||||||| |||||||| |||||| |||||| ||||||||||||    
T  31531129 atttcaagacaagttagtagtattaattaggggtatgtttaggaaaaataataataaatgcatctagtaatttgaaaaggagtttacatttagggacaaa 31531030  T
Q  278 a 278  Q
    |    
T  31531029 a 31531029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 31819508 - 31819617
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||||||||||| |||||||||||||||| || |||||||| | ||||||||||||||||||| |||||||| ||||  || |||  ||||||||||    
T  31819508 catatttcaagacaatatagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaattgggttatatttagggaca 31819607  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  31819608 aaaataaaat 31819617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 5504579 - 5504491
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttac 264  Q
    |||||||||||||||||||||||||||||||| || |||||||| | ||||||||||||||||||  ||||||||||||| ||||||||    
T  5504579 catatttcaagacaagatagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatatagtaatttaaaaaagggtttac 5504491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 14645890 - 14645786
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    ||||||||||||| |||||||||||| || || |||||||| | ||||||||||||||||||  |||||||||||||||||||||| |||| | ||||||    
T  14645890 atttcaagacaagttagtagtattaactaggggtatgtttagaaaaaaaataataaatgcatatagtaatttaaaaaggggtttacatttaagaacaaaa 14645791  T
Q  279 ataaa 283  Q
    |||||    
T  14645790 ataaa 14645786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 44083729 - 44083873
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||| ||||  ||||||||| || |||||||| | ||||||||||||||| ||| |||||||| |||| |||||||| ||||||||||    
T  44083729 catatttcaagataagttagtgatattaattaggggtatgtttagggaaaaaataataaatggatctagtaatttgaaaatgggtttacatttagggaca 44083828  T
Q  276 aaaataaa---------atgcttagatatagggacggagggagta 311  Q
    ||||||||         ||||||||||||||||||||||||||||    
T  44083829 aaaataaagtcaaatggatgcttagatatagggacggagggagta 44083873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 22659682 - 22659789
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||| ||||  ||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||||||||| | ||||| ||| | ||||    
T  22659682 catatttcaaaacaaattagtagtattaattaaggatatgtttatgaaaataataataaatgcatctagtaatttaaaaagagatttacatttggagaca 22659781  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  22659782 aaaataaa 22659789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 198 - 285
Target Start/End: Original strand, 26999167 - 26999254
Alignment:
Q  198 agtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||||| || |||||||| |||||||||||||||||||| | |||||||||||||||||||| |||  |||||||||||||||    
T  26999167 agtattaattaggggtatgtttaggaaaaaataataaatgcatctaataatttaaaaaggggtttacatttgaggacaaaaataaaat 26999254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 177 - 286
Target Start/End: Complemental strand, 39617254 - 39617146
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||||  ||||||||||||| |||||| |||||||||||| ||||||||||||| | | |||||||||  ||||||| ||||| ||||    
T  39617254 catatttcaagacaaga--gtagtattaattagggatatatttaagaaaaaaataataaatgcatctaatcatttaaaaaaaggtttacatttagtgaca 39617157  T
Q  276 aaaataaaatg 286  Q
    |||||||||||    
T  39617156 aaaataaaatg 39617146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 188 - 285
Target Start/End: Complemental strand, 13084351 - 13084255
Alignment:
Q  188 acaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||| |||||| |||||||| ||||||||||| |||||| ||||||||||||| |||||||| |||||| ||||||||||| ||| |||||||||||    
T  13084351 acaagttagtagcattaattagggatatgtttaggaaaaa-taataaatgcatctagtaatttgaaaaggagtttacgtttaaggataaaaataaaat 13084255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 194 - 285
Target Start/End: Original strand, 11140816 - 11140907
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||||||||| ||  ||||||| |||||||||||||||||||| |||||||| ||||| ||||||| || ||||| |||||||||||    
T  11140816 tagtagtattaattaggggcatgtttaggaaaaaataataaatgcatctagtaatttgaaaagaggtttacattcagggataaaaataaaat 11140907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 29349480 - 29349587
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||| |||||||||||||||  | |||||||||||||||| |||| |||||||| |||||||| |||| | |||||| |||||| |||    
T  29349480 catatttcaagataagttagtagtattaattagaggtatgtttaagaaaaaaataattaatgcatctagtaatttgaaaatgagtttacatttaggaaca 29349579  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  29349580 aaaataaa 29349587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 30476005 - 30476064
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  30476005 cctccgtcccttaatgtaggcacccattgcctttttcacattttttaagaaaagttgtca 30476064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 35145333 - 35145442
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta--agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||||||||||| || ||| ||||||||| |||||||||||  | ||||||||||||||||||| |||||||| |||| | |||||  |||||||||    
T  35145333 catatttcaagacaaaatggtaatattaattagggatatgtttaggaaaaaaaataataaatgcatctagtaatttgaaaa-gagtttatatttagggac 35145431  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  35145432 aaaaataaaat 35145442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 41308780 - 41308674
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| ||||||||||||||| || |||||||| | ||||||||||||||||||| |||||||| ||| ||| ||||  ||||| ||||    
T  41308780 catatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaggggattta-atttagagaca 41308682  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  41308681 aaaataaa 41308674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 34055866 - 34055760
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    |||||||||| |||||| |  |||||||||||| ||||||||  ||||||||||||||  ||| |||||||||||||||||| ||| ||||| || ||||    
T  34055866 tatttcaagataagataatgatattaattatgggtatgtttagaaaaaaataataaatatatctagtaatttaaaaaggggtatacatttagagaaaaaa 34055767  T
Q  279 ataaaat 285  Q
    |||||||    
T  34055766 ataaaat 34055760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 44698524 - 44698418
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||| |||| ||  ||||||||||||||||| | |||||||||||||||||||||||| |||  ||||||| |||| |||||||| | || ||||||    
T  44698524 catattttaagataaattagtagtattaattatgaaaatgtttaagaaaaaataataaatgtatcttgtaatttgaaaatgggtttacatctaaggacaa 44698425  T
Q  277 aaataaa 283  Q
    |||||||    
T  44698424 aaataaa 44698418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 43187105 - 43186996
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||||||||  ||||||||  || |||||||| ||||||| ||||||||||||| ||||| || ||||||||||||  |||| |||||    
T  43187105 catatttcaagacaagatagtgatattaattcagggtatgtttaggaaaaaaataataaatgcatctagtaaattgaaaaggggtttatatttaaggaca 43187006  T
Q  276 aaaataaaat 285  Q
    ||| ||||||    
T  43187005 aaagtaaaat 43186996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 50524977 - 50524873
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    ||||||||||||| ||||||| ||||||| || |||||||| ||||||| |||||||||||||  ||||||| |||| |||||||  |||| ||||||||    
T  50524977 atttcaagacaagttagtagttttaattaggggtatgtttaggaaaaaaataataaatgcatcttgtaatttgaaaaagggtttagatttaaggacaaaa 50524878  T
Q  279 ataaa 283  Q
    |||||    
T  50524877 ataaa 50524873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 29676881 - 29676822
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  29676881 cctccgtcccttaatgtaggcacccattgcctttttcatatttcttaagaaaaattgtca 29676822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 31474529 - 31474632
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaa 279  Q
    |||| |||||||  ||||||||||||||| || |||||||| ||||||||||||||| |||| | ||||||||||| | |||||  ||||| ||||||||    
T  31474529 attttaagacaaattagtagtattaattaggggtatgtttaggaaaaaataataaatacatctaataatttaaaaatgagtttatatttagagacaaaaa 31474628  T
Q  280 taaa 283  Q
    ||||    
T  31474629 taaa 31474632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 12077888 - 12077826
Alignment:
Q  37 cttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  12077888 cttcatccgtcccttaatgtaggcacccattgcatttttcaaatttcttaagaaaagttgtca 12077826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 29645473 - 29645535
Alignment:
Q  223 aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||    
T  29645473 aaaaaataataaatgcatctagtaatttgaaaagtggtttacatttagggacaaaaataaaat 29645535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 30476143 - 30476217
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaattt 250  Q
    |||||||||||| ||||||||||||||||||| || |||||||| | ||||||||||||||||||| ||||||||    
T  30476143 catatttcaagagaagatagtagtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaattt 30476217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 35055889 - 35055967
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaag 256  Q
    ||||||||| ||||| |||||||||||||||||| |||||||| || ||||||||||||||||| | |||||| |||||    
T  35055889 atatttcaatacaagttagtagtattaattatgggtatgtttaggataaaataataaatgcatctaataatttgaaaag 35055967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 40645776 - 40645881
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| || |||||||||||| || ||||||| || |||||||||||||||||| | |||||| ||| | ||||||  |||||||| ||    
T  40645776 catatttcaagacaagttattagtattaattaggggtatgttt-aggaaaaataataaatgcatctaataatttgaaaggaggtttatatttagggataa 40645874  T
Q  277 aaataaa 283  Q
    |||||||    
T  40645875 aaataaa 40645881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 53716971 - 53716865
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||| ||| ||||||||||||||  | |||||||||  ||||| ||||||||||||| ||||| || ||| ||| ||||| |||| ||||||    
T  53716971 catatttcaagataagttagtagtattaattgggaatatgtttagaaaaaattaataaatgcatctagtaaattgaaaggggatttacatttaaggacaa 53716872  T
Q  277 aaataaa 283  Q
    |||||||    
T  53716871 aaataaa 53716865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 11388223 - 11388326
Alignment:
Q  177 catatttcaagacaagatagtagtat--taattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttaggga 273  Q
    |||||||||||| ||| |||||||||  |||||| || |||||||| | ||||||||||||||||||| |||||||| |||| |||||||| |||| |||    
T  11388223 catatttcaagataagttagtagtatattaattaggggtatgtttagaaaaaaaataataaatgcatctagtaatttgaaaaagggtttacatttaagga 11388322  T
Q  274 caaa 277  Q
    ||||    
T  11388323 caaa 11388326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 50363129 - 50363235
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| ||||||||||||||| || ||||||| || |||||||||||||| ||  |||||||| |||| || |||||  ||||||||||    
T  50363129 catatttcaagacaagttagtagtattaattaggggtatgttt-aggaaaaataataaatgtatttagtaatttgaaaaaggttttac-attagggacaa 50363226  T
Q  277 aaataaaat 285  Q
    || ||||||    
T  50363227 aactaaaat 50363235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 279
Target Start/End: Complemental strand, 831364 - 831261
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||| | ||| || |||||||||||| |  |||||||| ||||| ||||||||||||||| |||| |||||||||| |||||| |||| |||||    
T  831364 catatttcaatataagttattagtattaattaggagtatgtttaggaaaataataataaatgcatctagtagtttaaaaaggagtttacatttaaggaca 831265  T
Q  276 aaaa 279  Q
    ||||    
T  831264 aaaa 831261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 44338184 - 44338283
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||||||||| ||| ||||| ||||||||| || |||||||| ||||| |  ||||||||||| || ||||| ||||||||||||| |||||| |||||    
T  44338184 atatttcaagataagttagtactattaattaggggtatgtttaggaaaataatataaatgcatctaggaatttgaaaaggggtttacatttaggtacaaa 44338283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 26043121 - 26043221
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||  ||||||||||||||| || |||||||| ||||| |||||||||||| || |||||||| |||||| |||||| ||||||||||    
T  26043121 catatttcaagataat-tagtagtattaattaggg-tatgtttaggaaaaaaataataaatgcgtctagtaatttgaaaaggagtttacatttagggaca 26043218  T
Q  276 aaa 278  Q
    |||    
T  26043219 aaa 26043221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 40645644 - 40645696
Alignment:
Q  46 tcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtc 98  Q
    |||||||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  40645644 tcccttaatgtaggcatccattgcctttttcacatttcttaagaaatgttgtc 40645696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 48309546 - 48309645
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||| ||| ||||||||||||||| || |||||||| ||||||  |||||||  ||| |||||||| ||||  ||||||  |||||||||||    
T  48309546 catatttcaagataagttagtagtattaattaggggtatgtttaggaaaaataaataaatatatctagtaatttgaaaattggtttaaatttagggacaa 48309645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 3475595 - 3475661
Alignment:
Q  220 aagaaaaaataa-taaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    |||||||||||| |||||||||| ||||| |||||||| ||||||  ||||||||||||||||||||    
T  3475595 aagaaaaaataaataaatgcatctagtaagttaaaaagaggtttatatttagggacaaaaataaaat 3475661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 33287969 - 33288047
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaag 256  Q
    ||||||||||||||| |||||||||||||||    |||||||| ||||||||| |||||| ||| |||||||| |||||    
T  33287969 atatttcaagacaagttagtagtattaattagatgtatgtttaggaaaaaatagtaaatgtatctagtaatttgaaaag 33288047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 11345469 - 11345566
Alignment:
Q  223 aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaa---------tgcttagatatagggacggagggagta 311  Q
    ||||||| |||||| |||| |||||||| ||||||||||||  ||||||| |||||||||||         |||||||||||||||||||||||||||    
T  11345469 aaaaaattataaatacatctagtaatttgaaaaggggtttaaatttaggggcaaaaataaaatcaaatgggtgcttagatatagggacggagggagta 11345566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 25750639 - 25750723
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaa 279  Q
    ||||||||||||||| |||||||| | |||||| |||||||||| ||| |||||||| |||| | |||||| |||| |||||||||    
T  25750639 tagtagtattaattaaggatatgtat-agaaaatataataaatgtatctagtaatttgaaaaagagtttacatttaaggacaaaaa 25750723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 5504693 - 5504625
Alignment:
Q  31 attatgcttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||| || |||| |||||||||||||||||||| || || ||||||||||||||| |||| |||||||    
T  5504693 attatactccctcggtcccttaatgtaggcacccgtttcccttttcacatttcttaagaaatgttgtca 5504625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 21933028 - 21933128
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||| ||   |||||||||| || |||||||| ||||| ||||||||||||||| |||||||| |||| |||||||  || |||||||    
T  21933028 catatttcaagataagttaaccgtattaattaggggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaatgggtttatattcagggaca 21933127  T
Q  276 a 276  Q
    |    
T  21933128 a 21933128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 33411979 - 33411871
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||  |||| ||||||||||||||| |||||| |||| | |||||||||||||| ||| | |||||| |||| |  ||||| |||| | | ||    
T  33411979 catatttcaatgcaagttagtagtattaattaaggatatatttagggaaaaataataaatgtatctaataatttgaaaatgaatttacatttaagaataa 33411880  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  33411879 aaataaaat 33411871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 41727373 - 41727321
Alignment:
Q  47 cccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||| || ||||||||||||||||||||||||  |||||||||||    
T  41727373 cccttaatgtagccatccattgcctttttcacatttcttaaaaaaagttgtca 41727321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 41739977 - 41739877
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||| ||| ||||||||||| || |||||||| | ||||||||||||||| | | |||||||| |||| | |||||  ||||||||||    
T  41739977 catatttcaagataagttagcagtattaattaagggtatgtttaggaaaaaaataataaatgtacctagtaatttgaaaatgagtttatatttagggaca 41739878  T
Q  276 a 276  Q
    |    
T  41739877 a 41739877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 275
Target Start/End: Complemental strand, 48903086 - 48902987
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaa--aaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||||||| ||  ||||||||||||||| || || ||||| | ||  |||||||||||||||| | ||||||||||||| |||||  ||||||||||    
T  48903086 atatttcaagaaaaattagtagtattaattaagggtaggtttagggaataaaataataaatgcatctattaatttaaaaaggagtttagatttagggaca 48902987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 27638219 - 27638164
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagtt 95  Q
    ||||||||| ||||| |||||| ||||| |||||||||||||||||| ||||||||    
T  27638219 cctccgtcctttaatataggcatccattacctttttcacatttcttaagaaaagtt 27638164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 178 - 285
Target Start/End: Original strand, 31826295 - 31826400
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||| ||||||||| ||||| |||||||||  | |||||||| ||||||| |||||||| ||| | ||||||||||| |||||||| | ||| || |||    
T  31826295 atattgcaagacaagttagtaatattaattaatggtatgttta-gaaaaaa-aataaatgtatctaataatttaaaaatgggtttacatatagagataaa 31826392  T
Q  278 aataaaat 285  Q
    ||||||||    
T  31826393 aataaaat 31826400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 43187235 - 43187176
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||| ||||||||| ||| |||||||||||||| ||||||||  |||||||||||    
T  43187235 cctccgtccgttaatgtagtcactcattgcctttttcatatttcttaaaaaaagttgtca 43187176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 50092770 - 50092880
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttt--aagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||||||||||||||  || ||||||||| || |||||||  || ||| ||||||||||||||| | |||||| ||||  | ||||  |||| ||||    
T  50092770 catatttcaagacaagatgataatattaattaagggtatgttttaaaaaaataataataaatgcatctattaatttgaaaatagatttatatttatggac 50092869  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  50092870 aaaaataaaat 50092880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 276
Target Start/End: Complemental strand, 4979606 - 4979528
Alignment:
Q  198 agtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||| ||||||||| | ||||| |||||||||| ||  |||||||| ||||| ||||||| |||||| ||||    
T  4979606 agtattaattaaggatatgttaaggaaaagataataaatgtatttagtaatttgaaaagaggtttacatttaggtacaa 4979528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 35145220 - 35145261
Alignment:
Q  56 taggcacccattgcctttttcacatttcttaggaaaagttgt 97  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  35145220 taggcacccagtgcctttttcacatttcttaagaaaagttgt 35145261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 11396823 - 11396918
Alignment:
Q  177 catatttcaagacaagatagtagtat--taattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgttta 269  Q
    |||||||||||| ||| |||||||||  |||||| |  |||||||| ||||| ||||||||||||||| | |||||| |||||| |||||| ||||    
T  11396823 catatttcaagataagttagtagtatattaattaggtgtatgtttaggaaaaaaataataaatgcatctaataatttgaaaaggagtttacattta 11396918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 26998858 - 26998918
Alignment:
Q  40 cctccgtccctt-aatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    |||||||||||| |||||||| | |||||  ||||||||||||||||| ||||||||||||    
T  26998858 cctccgtccctttaatgtaggtatccattatctttttcacatttcttaagaaaagttgtca 26998918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 46048493 - 46048545
Alignment:
Q  48 ccttaatgtaggcacccattgcctttt-tcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||| ||| ||||||| |||||||||||| ||||||||||||    
T  46048493 ccttaatgtaggcactcatcgccttttttcacatttcttaagaaaagttgtca 46048545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 50092632 - 50092688
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttg 96  Q
    |||||||||||||||||| ||| | ||||||||||| ||||||||||  ||||||||    
T  50092632 cctccgtcccttaatgtaagcatctattgccttttttacatttcttaacaaaagttg 50092688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 27638081 - 27638038
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta 220  Q
    ||||||||||||||||||||| |||||||||| || ||||||||    
T  27638081 catatttcaagacaagatagtggtattaattaggggtatgttta 27638038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 9178462 - 9178496
Alignment:
Q  230 aataaatgcatcaagtaatttaaaaaggggtttac 264  Q
    |||||||||||| ||||||||||||||||||||||    
T  9178462 aataaatgcatctagtaatttaaaaaggggtttac 9178496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 28229268 - 28229310
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgttta 220  Q
    |||||| |||||||| |||||||||||||||||| ||||||||    
T  28229268 atattttaagacaagttagtagtattaattatgggtatgttta 28229310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 50525118 - 50525065
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaag 93  Q
    |||| ||||||||||||| |||||| || | |||||||||||||||| ||||||    
T  50525118 cctctgtcccttaatgtaagcacccttttcttttttcacatttcttaagaaaag 50525065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 42010970 - 42011030
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaat 236  Q
    |||||||||||| ||  ||| |||||||||||||| |||||||| | ||||||||||||||    
T  42010970 catatttcaagataaattagcagtattaattatgggtatgtttaggaaaaaaataataaat 42011030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 4e-27; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 4738733 - 4738839
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| ||||||||||| ||| || |||||||| |||||| ||||||||||||| ||||||||||||  | |||||| |||||||||||    
T  4738733 catatttcaagacaagttagtagtattagttaggggtatgtttaggaaaaattaataaatgcatctagtaatttaaaagagagtttacatttagggacaa 4738832  T
Q  277 aaataaa 283  Q
    |||||||    
T  4738833 aaataaa 4738839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 39690485 - 39690378
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||  |||||| |||||||| || |||||||| ||||| ||||||||||||||| |||||||| |||||| |||||| ||||||||||||    
T  39690485 tatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatctagtaatttgaaaaggagtttacatttagggacaaa 39690386  T
Q  278 aataaaat 285  Q
    ||||||||    
T  39690385 aataaaat 39690378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 9946358 - 9946249
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgttta--agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    ||||||||||||||||||||||||||||||| || ||||||||  | ||||||||||||||||||| | |||||| ||||| |  |||| ||||||||||    
T  9946358 atatttcaagacaagatagtagtattaattaggggtatgtttaggaaaaaaaataataaatgcatctaataatttgaaaagagaattacatttagggaca 9946259  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  9946258 aaaataaaat 9946249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 35569006 - 35568897
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||  |||||||| |||||| || |||||||| ||||| ||||||||||||||  |||||||| |||||||||||||  |||||||||    
T  35569006 catatttcaagacaaattagtagtactaattaggggtatgtttaggaaaataataataaatgcatttagtaatttgaaaaggggtttacaattagggaca 35568907  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  35568906 aaaataaaat 35568897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 21912225 - 21912332
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||  |||||| |||||||| || |||||||| ||||| |||||||||||||||  ||||||| |||||| |||||| ||||||||||||    
T  21912225 tatttcaagacaaattagtaggattaattaggggtatgtttaggaaaataataataaatgcatcttgtaatttgaaaaggagtttacatttagggacaaa 21912324  T
Q  278 aataaaat 285  Q
    ||||||||    
T  21912325 aataaaat 21912332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 3559028 - 3558919
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||| |||||||||| |||| || |||||||| ||||||| ||||||||||||| |||||||| ||||| || |||  ||||||||||    
T  3559028 catatttcaagataagttagtagtatttattaagggtatgtttaggaaaaaaataataaatgcatctagtaatttgaaaagagggttatatttagggaca 3558929  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  3558928 aaaataaaat 3558919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 7736083 - 7736183
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||| ||| ||||||||||| ||||||||||| ||||| |||||||||||| || |||||||| ||||||||||||  ||||||||||    
T  7736083 catatttcaagataagttagcagtattaattagggatatgtttaggaaaaaaataataaatgcgtctagtaatttgaaaaggggtttatatttagggaca 7736182  T
Q  276 a 276  Q
    |    
T  7736183 a 7736183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 196 - 283
Target Start/End: Original strand, 27925395 - 27925483
Alignment:
Q  196 gtagtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    |||||| |||||| ||||||||||| | ||||||||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||    
T  27925395 gtagtactaattagggatatgtttagaaaaaaaataataaatgcatctagtaatttgaaaagggatttacatttagggacaaaaataaa 27925483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 40979213 - 40979102
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaa--aaat-aataaatgcatcaagtaatttaaaaaggggtttacgtttaggga 273  Q
    ||||||| |||||||||||||||||||||||| || |||||||| ||||  |||| |||||||||||| || ||||| ||||||| ||||| ||||||||    
T  40979213 catatttaaagacaagatagtagtattaattaggggtatgtttaggaaaataaataaataaatgcatctagaaatttgaaaagggctttacatttaggga 40979114  T
Q  274 caaaaataaaat 285  Q
     |||||||||||    
T  40979113 taaaaataaaat 40979102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 3631117 - 3631010
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||| || ||||||||||||| || |||||||| ||||||||||||||| |||| |||||||| |||| | |||||| |||| | | |||    
T  3631117 atatttcaagacaaaatggtagtattaattaggggtatgtttaggaaaaaataataaatacatctagtaatttgaaaaagagtttacatttaagaataaa 3631018  T
Q  278 aataaaat 285  Q
    ||||||||    
T  3631017 aataaaat 3631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 43454088 - 43454191
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaa 279  Q
    ||||||||||||| |||| |||||||||  ||||||||||| |||||||| |||||| ||||| ||||||| |||||| |||||| || || ||||||||    
T  43454088 atttcaagacaagttagtggtattaattcgggatatgtttaggaaaaaattataaatacatcatgtaatttgaaaaggtgtttacattgagagacaaaaa 43454187  T
Q  280 taaa 283  Q
    ||||    
T  43454188 taaa 43454191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 38972127 - 38972022
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||| ||| ||||||||||||||| || |||||||| ||||||| ||||||||||||| | |||||| ||||||||||||  |||||||| ||    
T  38972127 atatttcaagataagttagtagtattaattaagggtatgtttaggaaaaaaataataaatgcatctattaatttgaaaaggggtttaaatttaggga-aa 38972029  T
Q  277 aaataaa 283  Q
    |||||||    
T  38972028 aaataaa 38972022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 5151201 - 5151093
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaata-ataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| |||||||| |||||| || |||||||| ||||||||  | ||||||||| |||||||| ||| || |||||| ||||||||||    
T  5151201 catatttcaagacaagttagtagtactaattaggg-tatgtttaggaaaaaattgacaaatgcatctagtaatttcaaagggagtttacatttagggaca 5151103  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  5151102 aaaataaaat 5151093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 36750776 - 36750668
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||| ||||| ||| ||||||||||| || ||| |||| | |||||| |||||||||||| |||||||| |||||| |||||  |||||||||||    
T  36750776 atatttcaaaacaagttagcagtattaattaagggtatatttagggaaaaaaaaataaatgcatctagtaatttgaaaaggcgtttatatttagggacaa 36750677  T
Q  277 aaataaaat 285  Q
    |||||||||    
T  36750676 aaataaaat 36750668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 15898461 - 15898319
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    ||||||||||||| ||| |||||||||||    |||||||| ||||||  |||||||||||||| |||||||| |||| | |||||  ||||||||||||    
T  15898461 atttcaagacaagttagcagtattaattaaaagtatgtttaggaaaaataataataaatgcatctagtaatttgaaaaagagtttatatttagggacaaa 15898362  T
Q  278 aataaa---------atgcttagatatagggacggagggagta 311  Q
    ||||||         ||||||||||||||||||||||||||||    
T  15898361 aataaagtcaaacggatgcttagatatagggacggagggagta 15898319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 29866292 - 29866387
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagg 271  Q
    |||||||||||||||| ||||||||||||||| || |||||||| | ||||||| ||||||||||| ||||| || ||||| ||||||| ||||||    
T  29866292 catatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaaaattataaatgcatctagtaacttgaaaagaggtttacatttagg 29866387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 36177395 - 36177505
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa--aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    |||||||||| |||| | |||||||||||||| || |||||||| |||||  |||||||||| |||| |||||||| |||| |  ||||| |||||||||    
T  36177395 catatttcaaaacaaaaaagtagtattaattaagggtatgtttaggaaaaaaaataataaatacatctagtaatttgaaaatgaatttacatttagggac 36177494  T
Q  275 aaaaataaaat 285  Q
    |||||||||||    
T  36177495 aaaaataaaat 36177505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 10934109 - 10934187
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaa 255  Q
    |||||||||| ||||| ||||| ||||||||| | |||||||||||||||||||||||||||||| | |||||| ||||    
T  10934109 catatttcaatacaagttagtaatattaattaagaatatgtttaagaaaaaataataaatgcatctaataatttgaaaa 10934187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 194 - 283
Target Start/End: Complemental strand, 15967067 - 15966978
Alignment:
Q  194 tagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    ||||||||||||||| || ||| |||||||||||| ||||||||||||| ||||||||  |||| ||||||| ||||||||||||||||||    
T  15967067 tagtagtattaattaggggtatctttaagaaaaaaataataaatgcatctagtaattt-gaaagaggtttacatttagggacaaaaataaa 15966978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 36347599 - 36347493
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaa-ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    ||||||||||||| ||||| ||||||||| ||||||||||| ||||||  ||||||||||||| | |||||| |||||   ||||| |||| ||||||||    
T  36347599 atttcaagacaagttagtaatattaattagggatatgtttaggaaaaaggtaataaatgcatctaataatttgaaaagaaatttacatttatggacaaaa 36347500  T
Q  279 ataaaat 285  Q
    |||||||    
T  36347499 ataaaat 36347493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 27642607 - 27642752
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||| ||  |||||| |||||||| || ||||||||  |||| ||||||||||||||| |||||||| |||||| |||||  |||| |||||||    
T  27642607 tatttcaagataaattagtaggattaattaagggtatgtttagaaaaataataataaatgcatctagtaatttgaaaaggagtttatatttatggacaaa 27642706  T
Q  278 aataaaa---------tgcttagatatagggacggagggagtacat 314  Q
    |||||||         |||||| |||||||||||||||||||||||    
T  27642707 aataaaatcaaatgagtgcttacatatagggacggagggagtacat 27642752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 21575019 - 21574968
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaa 91  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  21575019 cctccgtcccttaatgtaggcacccattgtctttttcacatttcttaagaaa 21574968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 42644479 - 42644367
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa----aataataaatgcatcaagtaatttaaaaaggggtttacgtttaggg 272  Q
    |||||||||||||||| |||| |||||||||| || |||||||| |||||    || ||||||||| || | |||||| | |||||||||||||||||||    
T  42644479 catatttcaagacaagttagttgtattaattaagggtatgtttaggaaaaaaataaaaataaatgcttctaataattttagaaggggtttacgtttaggg 42644380  T
Q  273 acaaaaataaaat 285  Q
    |||| || |||||    
T  42644379 acaacaacaaaat 42644367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 4857495 - 4857387
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa--taataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||| |||| ||| ||||||||||||||| |  ||||||||||||||||  ||||||||||||   ||||||| |||| | |||||| ||||| |||    
T  4857495 catattttaagataagttagtagtattaattaggagtatgtttaagaaaaaaaataataaatgcatttggtaatttgaaaatgagtttacatttagagac 4857396  T
Q  275 aaaaataaa 283  Q
    |||||||||    
T  4857395 aaaaataaa 4857387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 20946190 - 20946291
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||| ||||| |||||||| |||||| |  ||||||||  |||| |||||||||||| || |||||||||||||||||||||  ||||| ||||    
T  20946190 catatttcaaaacaagttagtagtactaattaggagtatgtttagcaaaaaaataataaatgcgtctagtaatttaaaaaggggtttatatttagagaca 20946289  T
Q  276 aa 277  Q
    ||    
T  20946290 aa 20946291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 34877773 - 34877878
Alignment:
Q  181 tttcaagacaagatagtagtattaattatggatatgtttaagaa-aaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaa 279  Q
    |||||||||||| | ||||||||||||| |  ||| |||| ||| ||||||||||||||||  | |||||||||| ||| ||||| |||| |||||||||    
T  34877773 tttcaagacaagtttgtagtattaattaggagtatatttaggaataaaataataaatgcatataataatttaaaaggggatttacatttatggacaaaaa 34877872  T
Q  280 taaaat 285  Q
    ||||||    
T  34877873 taaaat 34877878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 10523274 - 10523167
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgttta-agaaaa---aataataaatgcatcaagtaatttaaaaaggggtttacgtttaggga 273  Q
    ||||||||||||||| ||||||||||||||| || |||||||| ||||||   ||||||||||||||| | |||||| ||||   |||||| |||| |||    
T  10523274 atatttcaagacaagttagtagtattaattaggggtatgtttagagaaaaaataataataaatgcatctaataatttgaaaa--agtttacatttatgga 10523177  T
Q  274 caaaaataaa 283  Q
    ||||||||||    
T  10523176 caaaaataaa 10523167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 5845279 - 5845386
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa-taataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||| ||||| ||||||||||||||| |  |||||||| ||||||| ||||||||||||| | |||||| |||  || ||||| |||||  |||    
T  5845279 catatttcaatacaagttagtagtattaattaggagtatgtttaggaaaaaattaataaatgcatctaataatttgaaagaggatttacatttagaaaca 5845378  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  5845379 aaaataaa 5845386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 9375640 - 9375561
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaa-aaaataataaatgcatcaagtaatttaaaaa 255  Q
    |||||||||||| ||| ||||||||||||| | | ||||||||||||| ||||||||||||  ||| |||||||||||||    
T  9375640 catatttcaagataagttagtagtattaatcaagaatatgtttaagaaaaaaataataaatatatctagtaatttaaaaa 9375561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 27798259 - 27798366
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtt-taagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||||||| || | |||||||||| || ||| || ||| | ||||||||||||||||  |||||||||||| | | ||||| |||||| |||    
T  27798259 catatttcaagacaagttattggtattaattaggggtatattctaaaataaaataataaatgcatttagtaatttaaaaggtgatttacatttaggaaca 27798358  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  27798359 aaaataaa 27798366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 27925342 - 27925393
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaa 91  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  27925342 cctccgtccctttatgtaggcacccattgcttttttcacatttcttaagaaa 27925393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 3631257 - 3631211
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttctta 86  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||    
T  3631257 cctccgtcccttaatgtaggcatccattgtctttttcacatttctta 3631211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 3247275 - 3247164
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag---aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttaggga 273  Q
    |||||||||||| ||||| ||||||||||||| || ||| |||| |   ||||||||||||||||||  | |||||| ||||||| ||||  ||| ||||    
T  3247275 catatttcaagaaaagattgtagtattaattaggggtatatttagggaaaaaaaataataaatgcatataataatttgaaaagggatttatatttgggga 3247176  T
Q  274 caaaaataaaat 285  Q
     |||||||||||    
T  3247175 taaaaataaaat 3247164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 311
Target Start/End: Complemental strand, 25017675 - 25017528
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaag---taatttaaaaaggggtttacgtttaggg 272  Q
    ||||||| |||||||| || |||||||||||| || ||| |||| | ||||||||||||||||||  ||   |||||| ||| ||||||||| |||| ||    
T  25017675 catattttaagacaagttaatagtattaattaggggtatatttaggaaaaaaataataaatgcatatagtaataatttgaaagggggtttacatttaagg 25017576  T
Q  273 acaaaaataa---------aatgcttagatatagggacggagggagta 311  Q
    ||||||||||         ||||||||||||||||||||||| |||||    
T  25017575 acaaaaataaagtcaaatgaatgcttagatatagggacggagagagta 25017528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 3247413 - 3247357
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttg 96  Q
    ||||||| |||||| ||||  |||||||||||||||||||||||||| |||||||||    
T  3247413 cctccgttccttaacgtagatacccattgcctttttcacatttcttaagaaaagttg 3247357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 7510689 - 7510749
Alignment:
Q  223 aaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    ||||||||||||||| ||| |||||||| |||||| |||||| ||||||||||| ||||||    
T  7510689 aaaaaataataaatgtatctagtaatttgaaaaggcgtttacatttagggacaataataaa 7510749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 8717960 - 8717880
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaag-aaaaaataataaatgcatcaagtaatttaaaaag 256  Q
    |||||||||||||||| | ||| ||||||||| || |||||||| | |||||||||||| |||||| |||||||| |||||    
T  8717960 catatttcaagacaagttcgtattattaattaggggtatgtttaggaaaaaaataataagtgcatctagtaatttgaaaag 8717880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 18729715 - 18729798
Alignment:
Q  197 tagtattaattatggatatgtttaagaaaaa--ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaa 278  Q
    |||||||||||| || |||||||| ||||||  |||||||||||||| | |||||| ||||||||||||  |||||||| ||||    
T  18729715 tagtattaattaggggtatgtttaggaaaaataataataaatgcatctaataatttgaaaaggggtttagatttagggataaaa 18729798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 25690597 - 25690545
Alignment:
Q  233 aaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||| ||||| || ||||||||||||| ||||||||||||||||||||    
T  25690597 aaatgcatctagtaagttgaaaaggggtttacatttagggacaaaaataaaat 25690545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 25690684 - 25690616
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaa-aaaataataaatgcatcaagtaa 247  Q
    ||||||||||||| |||| |||||||||| || |||||||||||| |||||||||||| |||| |||||    
T  25690684 atttcaagacaagttagttgtattaattaggggtatgtttaagaaaaaaataataaatacatctagtaa 25690616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 31641190 - 31641084
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataa---atgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||| ||| |||| |||||||||| || ||||||||  ||||||||||||   || |||| |||||||| ||||| | ||||  |||||||||||    
T  31641190 atttcaagataagttagtggtattaattaggggtatgtttagaaaaaaataataataaatacatctagtaatttgaaaagagatttaaatttagggacaa 31641091  T
Q  277 aaataaa 283  Q
    |||||||    
T  31641090 aaataaa 31641084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 16113 - 16042
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaattt 250  Q
    ||||||||||||| ||||||||||||  | || |||||||| ||||| ||||||||||||||| ||||||||    
T  16113 atttcaagacaagttagtagtattaaccaggggtatgtttaggaaaataataataaatgcatctagtaattt 16042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 20975788 - 20975697
Alignment:
Q  195 agtagtattaattatggatatgtttaagaaaaaataa-taaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaaat 285  Q
    ||||||||||| || ||  ||||||| ||||||| || |||||||||| |||||||| |||||| |||||| |||| | |||||||||||||    
T  20975788 agtagtattaactaggggcatgtttaggaaaaaaaaaataaatgcatctagtaatttgaaaaggagtttacatttaagaacaaaaataaaat 20975697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 25017813 - 25017754
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||||||||| ||| ||||| ||||||||| ||||||| |||| |||||||    
T  25017813 cctccgtcccttaatgtagacactcattgtctttttcacgtttcttaagaaatgttgtca 25017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 34877631 - 34877690
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||| ||||||||| ||  ||||||||||||||||||||||| |||| |||||||    
T  34877631 cctccgtcctttaatgtagacattcattgcctttttcacatttcttaagaaatgttgtca 34877690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 5845138 - 5845200
Alignment:
Q  37 cttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||| ||| ||||||||| ||||||||||||||| |||||||| |||  |||||||    
T  5845138 cttcctccgtctcttgatgtaggcatccattgcctttttcatatttcttaagaattgttgtca 5845200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 32068089 - 32068150
Alignment:
Q  177 catatttcaagacaa-gatagtagtattaattatggatatgtttaagaaaaaataataaatg 237  Q
    ||||||||||||||| | |||||||||||| || || |||||| ||||||||||||||||||    
T  32068089 catatttcaagacaaagttagtagtattaagtaagggtatgttaaagaaaaaataataaatg 32068150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 29874261 - 29874317
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataata 233  Q
    |||||||||| ||||| || |||||||||||| || |||||||| ||||||||||||    
T  29874261 catatttcaaaacaagttattagtattaattaggggtatgtttaggaaaaaataata 29874317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 19281493 - 19281381
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtt----taagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttaggg 272  Q
    |||||||||| ||||  ||||||||||||||| |||||||||    ||| ||| |||||||||| |||| ||| |||| |||| | |||||  |||| |     
T  19281493 catatttcaaaacaaattagtagtattaattagggatatgtttaggtaaaaaataataataaatacatctagtgatttgaaaatgcgtttatatttatga 19281394  T
Q  273 acaaaaataaaat 285  Q
    |||||||||||||    
T  19281393 acaaaaataaaat 19281381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 30348078 - 30347975
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    ||||||||||| |||| ||||||||||||||| || |||||||| |||||||    ||||| ||| | |||||| |||||||  |||| |||||||| ||    
T  30348078 catatttcaaggcaagttagtagtattaatta-gggtatgtttatgaaaaaa----aaatgtatctaataatttgaaaagggacttacatttagggataa 30347984  T
Q  277 aaataaaat 285  Q
    ||| |||||    
T  30347983 aaagaaaat 30347975  T

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Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 36177257 - 36177312
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagtt 95  Q
    ||||| |||||||||||||||| | |||| |||||| |||||||||| ||||||||    
T  36177257 cctccatcccttaatgtaggcatctattgtcttttttacatttcttaagaaaagtt 36177312  T

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Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 10933956 - 10934030
Alignment:
Q  25 ttattcattatgcttcctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||| ||||| || ||||||| ||||||||||||||   |||||||||||||||||| ||  |||| |||||||    
T  10933956 ttattaattatactccctccgttccttaatgtaggcatttattgcctttttcacattttttcagaaatgttgtca 10934030  T

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Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 21574878 - 21574806
Alignment:
Q  181 tttcaagacaagatagtagtattaattatggatatgttt---aagaaaaaataataaatgcatcaagtaattt 250  Q
    |||||||||||| | ||||||||||||| || |||||||   || ||||||||| ||||||||| ||||||||    
T  21574878 tttcaagacaagtttgtagtattaattaggggtatgtttaggaaaaaaaaataacaaatgcatctagtaattt 21574806  T

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Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 40979342 - 40979292
Alignment:
Q  49 cttaatgtaggcacccattgcctttttcacatttcttaggaaaagttgtca 99  Q
    ||||||||||||| |||||| |||||||| ||||||||  |||||||||||    
T  40979342 cttaatgtaggcatccattgtctttttcatatttcttaataaaagttgtca 40979292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 129758 - 129815
Alignment:
Q  226 aaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    |||||||||||||||| |||||||||||||  ||||||  | ||| ||||||||||||    
T  129758 aaataataaatgcatctagtaatttaaaaaatggtttatatgtagagacaaaaataaa 129815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 600869 - 600945
Alignment:
Q  178 atatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaa 255  Q
    |||||| |||||||| ||||| ||||||||| |  |||||||| ||||||  |||||||||||| || ||||||||||    
T  600869 atattttaagacaagttagtaatattaattaggattatgttta-gaaaaataaataaatgcatctagaaatttaaaaa 600945  T

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Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 39042547 - 39042583
Alignment:
Q  199 gtattaattatggatatgtttaagaaaaaataataaa 235  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  39042547 gtattaattagggatatgtttaggaaaaaataataaa 39042583  T

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Target: scaffold0038 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 38478 - 38378
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||||||||| ||||||||||||||| || |||||||| |||||||||||||||||||| |||||||| |||| || ||||| |||| ||||||    
T  38478 catatttcaagacaagttagtagtattaattaggggtatgtttaggaaaaaataataaatgcatctagtaatttgaaaaaggatttacatttaaggacaa 38379  T
Q  277 a 277  Q
    |    
T  38378 a 38378  T

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Target: scaffold1091 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 1915 - 1808
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaa-ataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||| ||||||||  ||||||||||||||| || |||||||| |||||| |||||||||||||| |||||||| ||||||||||||| || |||||||    
T  1915 catattgcaagacaaattagtagtattaattaggggtatgtttaggaaaaacataataaatgcatctagtaatttgaaaaggggtttacattgagggaca 1816  T
Q  276 aaaataaa 283  Q
    ||||||||    
T  1815 aaaataaa 1808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 25801 - 25911
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta--agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggac 274  Q
    ||||||||||||||||  |||||||||||||| || ||||||||  | ||||||||||||||  ||| |||||||| ||||| ||||||| |||||||||    
T  25801 catatttcaagacaagtgagtagtattaattaggggtatgtttagaaaaaaaaataataaatatatctagtaatttgaaaagaggtttacatttagggac 25900  T
Q  275 aaaaataaaat 285  Q
    |||| ||||||    
T  25901 aaaactaaaat 25911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 49240 - 49346
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgtttaagaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaa 276  Q
    |||||||||| ||||  ||||||||||||||| || |||||||| ||||||||||||||| |||| |||||||| ||||||| ||||| ||||  || ||    
T  49240 catatttcaaaacaaattagtagtattaattaggggtatgtttaggaaaaaataataaatacatctagtaatttgaaaagggatttacatttaaagaaaa 49339  T
Q  277 aaataaa 283  Q
    |||||||    
T  49340 aaataaa 49346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 24162 - 24271
Alignment:
Q  177 catatttcaagacaagatagtagtattaattatggatatgttta-agaaaaaataataaatgcatcaagtaatttaaaaaggggtttacgtttagggaca 275  Q
    |||||||||||| ||| || |||||||||||| || |||||||| | |||||||| |||||||||| |||||||| |||   | ||||| ||||||||||    
T  24162 catatttcaagataagttaatagtattaattaggggtatgtttagaaaaaaaatagtaaatgcatctagtaatttgaaagaagatttacatttagggaca 24261  T
Q  276 aaaataaaat 285  Q
    ||||||||||    
T  24262 aaaataaaat 24271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 24100 - 24151
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacatttcttaggaaa 91  Q
    ||||||||| ||||||||||||  |||||| |||||||||||||||| ||||    
T  24100 cctccgtcctttaatgtaggcattcattgcatttttcacatttcttaagaaa 24151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 179 - 283
Target Start/End: Original strand, 6614 - 6719
Alignment:
Q  179 tatttcaagacaagatagtagtattaattatggatatgtttaagaaaa-aataataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaa 277  Q
    |||||||||||||| |||||||||| ||||    |||||||| ||||| |||| |||||||||  |||||||| ||| | ||||||| |||| |||||||    
T  6614 tatttcaagacaagttagtagtattgattagttgtatgtttaggaaaataatattaaatgcatgtagtaatttgaaatgaggtttacatttaaggacaaa 6713  T
Q  278 aataaa 283  Q
    ||||||    
T  6714 aataaa 6719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 178 - 275
Target Start/End: Original strand, 214722 - 214824
Alignment:
Q  178 atatttcaagacaagatagtagtat--taattatggatatgtttaagaaaaa---ataataaatgcatcaagtaatttaaaaaggggtttacgtttaggg 272  Q
    |||||| |||| ||| |||||||||  |||||| || ||||||||  |||||   |||||||||||||| |||||||| ||||||||||||| |||| ||    
T  214722 atattttaagataagttagtagtatattaattaggggtatgtttagaaaaaatatataataaatgcatctagtaatttgaaaaggggtttacatttaagg 214821  T
Q  273 aca 275  Q
    |||    
T  214822 aca 214824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 20120 - 20168
Alignment:
Q  180 atttcaagacaagatagtagtattaattatggatatgtttaagaaaaaa 228  Q
    ||||||| ||||| |||||||||||||||| | ||||||||||||||||    
T  20120 atttcaaaacaagttagtagtattaattataggtatgtttaagaaaaaa 20168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 22030 - 22072
Alignment:
Q  40 cctccgtcccttaatgtaggcacccattgcctttttcacattt 82  Q
    |||||||||||||||||||||||  |||| |||||||||||||    
T  22030 cctccgtcccttaatgtaggcacatattgtctttttcacattt 22072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 22554 - 22639
Alignment:
Q  200 tattaattatggatatgtttaagaaaaaa--taataaatgcatcaagtaatttaaaaaggggtttacgtttagggacaaaaataaa 283  Q
    ||||||||| || |||||||| |||||||  ||||||||||||| |||||||| |||  | |||||| | ||| ||||||||||||    
T  22554 tattaattaggggtatgtttaggaaaaaaattaataaatgcatctagtaatttgaaagtgtgtttacatgtagagacaaaaataaa 22639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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