View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12850_low_26 (Length: 293)
Name: NF12850_low_26
Description: NF12850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12850_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 11 - 278
Target Start/End: Original strand, 105875 - 106142
Alignment:
| Q |
11 |
cagagacaaataatttatcagaacaacacgattacgatttgggaaggaccccaacacagcctcgcaacattttgaaagaaaaagaaattatattaaacaa |
110 |
Q |
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| T |
105875 |
cagacacaaataatttatcagaacaacacgattacgatttgggaaggaccccaacacagcctcgcaacattttgaaagaaaaagaaattatattaaacaa |
105974 |
T |
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| Q |
111 |
cccaagaagttttcactatcttttcaatagatgttaccacaactctctttaagagcaaattagtaaccaatagtgatggttaaattaatgcaattgagac |
210 |
Q |
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| T |
105975 |
cccaagaagttttcactatcttttcaatagatgttaccacaactctctttaagagcaaattagtaaccaatagtgatggttaaattaatgcaattgagac |
106074 |
T |
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| Q |
211 |
aagagaacacaccttcattattaggtgaacaacacaatttcattattaggggaacaacaagacgaaga |
278 |
Q |
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| T |
106075 |
aagagaacacaccttcattattaggtgaacaacacaatttcattattaggggaacaacaagacgaaga |
106142 |
T |
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