View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12850_low_9 (Length: 441)
Name: NF12850_low_9
Description: NF12850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12850_low_9 |
 | |
|
| [»] scaffold1330 (1 HSPs) |
| | |
|
| [»] scaffold0345 (1 HSPs) |
| | |
|
| [»] scaffold0105 (5 HSPs) |
| | |
|
| [»] scaffold0496 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 376; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 16 - 423
Target Start/End: Original strand, 7457887 - 7458294
Alignment:
| Q |
16 |
atgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtg |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7457887 |
atgaataaagcaagaaaaatgtgttcgggtgtatttatggatgaaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtg |
7457986 |
T |
|
| Q |
116 |
gtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacc |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7457987 |
gtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccaatgccaactggagtattggaggcaccaccatcttatggaccacc |
7458086 |
T |
|
| Q |
216 |
tcctttgattgcagttgtaaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccatt |
315 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
7458087 |
tcccttgattgcagttgtaaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaagaagtatgataaaaacaataactcttgggttaccatt |
7458186 |
T |
|
| Q |
316 |
ggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcatt |
415 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
7458187 |
ggaagatttcctgagcaagccacctcaatgaaaggttggggattagcttttcgtgcatgtggagatatgctaatttttcttggaggtcccattcttcatt |
7458286 |
T |
|
| Q |
416 |
gtagaggc |
423 |
Q |
| |
|
|||||||| |
|
|
| T |
7458287 |
gtagaggc |
7458294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 16 - 423
Target Start/End: Original strand, 7411808 - 7412215
Alignment:
| Q |
16 |
atgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtg |
115 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7411808 |
atgaataaagcaagaaaaatgtgttggggtgtatttatggatgaaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtg |
7411907 |
T |
|
| Q |
116 |
gtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacc |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7411908 |
gtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccaatgccaactggagtattggaggcaccaccatcttatggaccacc |
7412007 |
T |
|
| Q |
216 |
tcctttgattgcagttgtaaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccatt |
315 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
7412008 |
tcccttgattgcagttgtaaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaagaagtatgataaaaacaataactcttgggttaccatt |
7412107 |
T |
|
| Q |
316 |
ggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcatt |
415 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
7412108 |
ggaagatttcctgagcaagccacctcaatgaaaggttggggattagcttttcgtgcatgtggagatatgctaatttttcttggaggtcccattcttcatt |
7412207 |
T |
|
| Q |
416 |
gtagaggc |
423 |
Q |
| |
|
|||||||| |
|
|
| T |
7412208 |
gtagaggc |
7412215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 44919976 - 44920056
Alignment:
| Q |
49 |
tttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgat |
129 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||| |||||| ||| |||||||||| ||| || |||||||| || |||||| |
|
|
| T |
44919976 |
tttatggatgaaaaattttatgtccttggcggagttggagttgacaaaacaacacaactaacttgtggtgaagagtttgat |
44920056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 44920148 - 44920184
Alignment:
| Q |
212 |
cacctcctttgattgcagttgtaaaaaatgtattgta |
248 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
44920148 |
cacctcctttaattgcagttgtaaaagatgtattgta |
44920184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1330 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold1330
Description:
Target: scaffold1330; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 1538 - 1903
Alignment:
| Q |
16 |
atgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtg |
115 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| |||||||||| |
|
|
| T |
1538 |
atgaataaagcaagaaaaatgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtg |
1637 |
T |
|
| Q |
116 |
gtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacc |
215 |
Q |
| |
|
| ||||| |||||||| |||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||| |
|
|
| T |
1638 |
gggaggagtttgatatgaagacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacc |
1737 |
T |
|
| Q |
216 |
tcctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttacca |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | || |
|
|
| T |
1738 |
tcctttgattgcagttgtaaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatca |
1835 |
T |
|
| Q |
314 |
ttggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
381 |
Q |
| |
|
||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
1836 |
ttggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
1903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0345 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold0345
Description:
Target: scaffold0345; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 3840 - 3475
Alignment:
| Q |
16 |
atgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtg |
115 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| |||||||||| |
|
|
| T |
3840 |
atgaataaagcaagaaaaatgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtg |
3741 |
T |
|
| Q |
116 |
gtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacc |
215 |
Q |
| |
|
| ||||| |||||||| |||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||| |
|
|
| T |
3740 |
gggaggagtttgatatgaagacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacc |
3641 |
T |
|
| Q |
216 |
tcctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttacca |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | || |
|
|
| T |
3640 |
tcctttgattgcagttgtaaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatca |
3543 |
T |
|
| Q |
314 |
ttggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
381 |
Q |
| |
|
||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
3542 |
ttggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
3475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105 (Bit Score: 174; Significance: 2e-93; HSPs: 5)
Name: scaffold0105
Description:
Target: scaffold0105; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 3953 - 3588
Alignment:
| Q |
16 |
atgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtg |
115 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| |||||||||| |
|
|
| T |
3953 |
atgaataaagcaagaaaaatgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtg |
3854 |
T |
|
| Q |
116 |
gtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacc |
215 |
Q |
| |
|
| ||||| |||||||| |||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||| |
|
|
| T |
3853 |
gggaggagtttgatatgaagacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacc |
3754 |
T |
|
| Q |
216 |
tcctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttacca |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | || |
|
|
| T |
3753 |
tcctttgattgcagttgtaaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatca |
3656 |
T |
|
| Q |
314 |
ttggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
381 |
Q |
| |
|
||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
3655 |
ttggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
3588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 16 - 381
Target Start/End: Complemental strand, 10035 - 9670
Alignment:
| Q |
16 |
atgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtg |
115 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| |||||||||| |
|
|
| T |
10035 |
atgaataaagcaagaaaaatgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtg |
9936 |
T |
|
| Q |
116 |
gtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacc |
215 |
Q |
| |
|
| ||||| |||||||| |||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||| |
|
|
| T |
9935 |
gggaggagtttgatatgaagacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacc |
9836 |
T |
|
| Q |
216 |
tcctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttacca |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | || |
|
|
| T |
9835 |
tcctttgattgcagttgtaaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatca |
9738 |
T |
|
| Q |
314 |
ttggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
381 |
Q |
| |
|
||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
9737 |
ttggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
9670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 48739 - 49104
Alignment:
| Q |
16 |
atgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtg |
115 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| |||||||||| |
|
|
| T |
48739 |
atgaataaagcaagaaaaatgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgaaaaaaaaacacagcttacatgtg |
48838 |
T |
|
| Q |
116 |
gtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacc |
215 |
Q |
| |
|
| ||||| |||||||| |||| |||| |||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||| |
|
|
| T |
48839 |
gggaggagtttgatatgaagacaaaaaaatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacc |
48938 |
T |
|
| Q |
216 |
tcctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttacca |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | || |
|
|
| T |
48939 |
tcctttgattgcagttgtaaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatca |
49036 |
T |
|
| Q |
314 |
ttggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
381 |
Q |
| |
|
||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
49037 |
ttggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
49104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #4
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 16 - 381
Target Start/End: Original strand, 35139 - 35504
Alignment:
| Q |
16 |
atgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtg |
115 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| |||||||||| |
|
|
| T |
35139 |
atgaataaagcaagaaaaatgtgttcaagtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtg |
35238 |
T |
|
| Q |
116 |
gtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacc |
215 |
Q |
| |
|
| ||||| |||||||| |||| |||| ||||| |||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| |||| |
|
|
| T |
35239 |
gggaggagtttgatatgaagacaaaaaaatggtgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacc |
35338 |
T |
|
| Q |
216 |
tcctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttacca |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | || |
|
|
| T |
35339 |
tcctttgattgcagttgtaaaaaatgtattgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatca |
35436 |
T |
|
| Q |
314 |
ttggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
381 |
Q |
| |
|
||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
35437 |
ttggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
35504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 217 - 381
Target Start/End: Complemental strand, 15899 - 15735
Alignment:
| Q |
217 |
cctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccat |
314 |
Q |
| |
|
||||||||||| |||||||||||||||||| || ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||| |
|
|
| T |
15899 |
cctttgattgcggttgtaaaaaatgtattggatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcat |
15802 |
T |
|
| Q |
315 |
tggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagat |
381 |
Q |
| |
|
|||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
15801 |
tggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagat |
15735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0496 (Bit Score: 168; Significance: 7e-90; HSPs: 1)
Name: scaffold0496
Description:
Target: scaffold0496; HSP #1
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 16 - 403
Target Start/End: Original strand, 2736 - 3123
Alignment:
| Q |
16 |
atgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtg |
115 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| || | |||||| |||| ||||| ||||||||||| |
|
|
| T |
2736 |
atgaataaagcaagaaaaatgtgttcaagtgtatttatggatggaaaattttacgtccttggtgggatagcagctgacaaaaaaacacaacttacatgtg |
2835 |
T |
|
| Q |
116 |
gtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacc |
215 |
Q |
| |
|
||||||| ||||||||||||| ||| ||||||||||||||||||||||| ||||||| | ||||||||| | ||| ||||||| |||| ||| |||| |
|
|
| T |
2836 |
gtgaggagtttgatataaagaataaaaaatggcgtgaaatacccaacatgctcccagtacgaactggagtgtctgagacaccaccttcttttgggtcacc |
2935 |
T |
|
| Q |
216 |
tcctttgattgcagttgtaaaaaatgtattgtataatgctgattacgcaacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccatt |
315 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| ||| ||||| | || | | |||||||| |||||| ||||| |||| |||| |||||| | |||| |
|
|
| T |
2936 |
tcccttgattgcagttgtaaaaaatgtattgtatgctgcagattatggaaaacaagaagtaaagaagtatgataaagacaacaactattgggtcatcatt |
3035 |
T |
|
| Q |
316 |
ggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtc |
403 |
Q |
| |
|
||||| |||||||||||||| || || |||| ||||||||| |||| ||||| |||||||||||| ||| | ||||| ||||||| |
|
|
| T |
3036 |
ggaagctttcctgagcaagctacatcggtgaatggttggggactagcatttcgatcatgtggagataaactattatttcttggaggtc |
3123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 17356620 - 17356675
Alignment:
| Q |
16 |
atgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgt |
71 |
Q |
| |
|
||||||||| | || || |||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
17356620 |
atgaataaaccgaggaagatgtgttctggtgtattcatggatggaaaattttatgt |
17356675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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