View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12852_low_5 (Length: 303)

Name: NF12852_low_5
Description: NF12852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12852_low_5
NF12852_low_5
[»] chr2 (41 HSPs)
chr2 (1-189)||(10394259-10394433)
chr2 (78-149)||(6075497-6075568)
chr2 (73-128)||(28108433-28108488)
chr2 (77-128)||(30757626-30757677)
chr2 (77-128)||(41436077-41436128)
chr2 (232-290)||(10393440-10393498)
chr2 (137-189)||(43950424-43950476)
chr2 (78-126)||(44424323-44424371)
chr2 (134-189)||(43077702-43077757)
chr2 (75-125)||(8031737-8031787)
chr2 (135-189)||(33755334-33755388)
chr2 (78-132)||(43427140-43427194)
chr2 (80-125)||(435139-435184)
chr2 (73-126)||(33880152-33880205)
chr2 (73-125)||(7648927-7648979)
chr2 (78-126)||(18181273-18181321)
chr2 (77-125)||(23684957-23685005)
chr2 (78-126)||(26273758-26273806)
chr2 (77-125)||(28301432-28301480)
chr2 (73-125)||(28925909-28925961)
chr2 (73-121)||(33751455-33751503)
chr2 (137-189)||(41436158-41436209)
chr2 (73-128)||(3100394-3100449)
chr2 (78-125)||(3199897-3199944)
chr2 (78-125)||(8550703-8550750)
chr2 (134-189)||(24775784-24775839)
chr2 (78-128)||(4794572-4794622)
chr2 (75-125)||(13375251-13375301)
chr2 (135-189)||(44534459-44534513)
chr2 (78-123)||(33275761-33275806)
chr2 (77-126)||(38282483-38282532)
chr2 (78-126)||(2756673-2756721)
chr2 (78-126)||(5425856-5425904)
chr2 (78-126)||(9472421-9472469)
chr2 (76-132)||(28572205-28572261)
chr2 (78-126)||(31348510-31348558)
chr2 (73-125)||(37247945-37247997)
chr2 (73-109)||(40965046-40965082)
chr2 (137-189)||(40965093-40965145)
chr2 (77-125)||(43077787-43077835)
chr2 (78-110)||(44024717-44024749)
[»] chr7 (40 HSPs)
chr7 (73-189)||(45890834-45890950)
chr7 (73-132)||(33584557-33584616)
chr7 (74-128)||(29434638-29434692)
chr7 (73-128)||(29257541-29257596)
chr7 (77-132)||(31581497-31581552)
chr7 (73-125)||(34963872-34963924)
chr7 (77-128)||(2846734-2846785)
chr7 (77-132)||(30463014-30463069)
chr7 (134-189)||(37490594-37490649)
chr7 (135-189)||(44604454-44604508)
chr7 (75-128)||(48981652-48981705)
chr7 (132-176)||(29434569-29434613)
chr7 (78-126)||(37264312-37264360)
chr7 (78-126)||(37496457-37496505)
chr7 (137-189)||(40038085-40038137)
chr7 (73-109)||(47453998-47454034)
chr7 (77-132)||(23703914-23703969)
chr7 (78-125)||(25778743-25778790)
chr7 (79-126)||(25940809-25940856)
chr7 (79-126)||(28333171-28333218)
chr7 (134-189)||(30463092-30463147)
chr7 (73-128)||(36117655-36117710)
chr7 (77-128)||(44604535-44604586)
chr7 (73-128)||(46288489-46288544)
chr7 (135-189)||(2846652-2846706)
chr7 (79-125)||(27234503-27234549)
chr7 (134-176)||(29645223-29645265)
chr7 (75-121)||(40038176-40038222)
chr7 (134-187)||(18235266-18235319)
chr7 (77-126)||(37157168-37157217)
chr7 (75-128)||(49100560-49100613)
chr7 (77-125)||(2842113-2842161)
chr7 (77-125)||(5724768-5724816)
chr7 (134-189)||(7425853-7425909)
chr7 (73-128)||(11616555-11616611)
chr7 (78-126)||(14648979-14649027)
chr7 (78-126)||(32775982-32776030)
chr7 (78-126)||(34064214-34064262)
chr7 (76-132)||(38181928-38181984)
chr7 (78-126)||(38589733-38589781)
[»] chr4 (49 HSPs)
chr4 (79-189)||(2906684-2906794)
chr4 (77-132)||(32559161-32559216)
chr4 (73-132)||(39258326-39258385)
chr4 (73-128)||(42024259-42024314)
chr4 (77-126)||(29644353-29644402)
chr4 (73-128)||(38976985-38977040)
chr4 (73-128)||(41710202-41710257)
chr4 (74-128)||(39979775-39979829)
chr4 (79-128)||(4360466-4360515)
chr4 (75-128)||(49306583-49306636)
chr4 (78-126)||(40021008-40021056)
chr4 (132-187)||(4357641-4357696)
chr4 (77-132)||(26799270-26799325)
chr4 (134-189)||(35909549-35909604)
chr4 (78-125)||(49448840-49448887)
chr4 (73-128)||(49812223-49812278)
chr4 (138-189)||(54729460-54729511)
chr4 (79-125)||(18509446-18509492)
chr4 (78-135)||(43335074-43335131)
chr4 (74-126)||(3686006-3686058)
chr4 (78-126)||(4354447-4354495)
chr4 (77-125)||(4357566-4357614)
chr4 (73-125)||(35998178-35998230)
chr4 (78-126)||(41436480-41436528)
chr4 (77-125)||(42185857-42185905)
chr4 (13-125)||(8294962-8295075)
chr4 (132-187)||(17237117-17237172)
chr4 (74-121)||(22496742-22496789)
chr4 (134-189)||(27977223-27977278)
chr4 (78-125)||(47277743-47277790)
chr4 (78-125)||(47846898-47846945)
chr4 (73-128)||(54729542-54729596)
chr4 (134-188)||(4360385-4360439)
chr4 (78-128)||(22872446-22872496)
chr4 (75-125)||(37309694-37309744)
chr4 (134-180)||(40020933-40020979)
chr4 (77-126)||(39052961-39053010)
chr4 (75-128)||(42544205-42544258)
chr4 (78-126)||(9052110-9052158)
chr4 (78-126)||(10099785-10099833)
chr4 (81-125)||(21954491-21954535)
chr4 (78-126)||(22020570-22020618)
chr4 (78-126)||(25250653-25250701)
chr4 (78-126)||(29550787-29550835)
chr4 (78-126)||(38319910-38319958)
chr4 (76-128)||(39976448-39976500)
chr4 (76-128)||(44020820-44020872)
chr4 (77-109)||(47787924-47787956)
chr4 (93-133)||(50714596-50714636)
[»] chr3 (36 HSPs)
chr3 (74-189)||(39365013-39365129)
chr3 (73-125)||(54493902-54493954)
chr3 (134-189)||(54122200-54122255)
chr3 (77-135)||(15280603-15280661)
chr3 (73-125)||(32827365-32827417)
chr3 (77-125)||(41031570-41031618)
chr3 (75-126)||(1334841-1334892)
chr3 (73-128)||(5245406-5245461)
chr3 (134-189)||(9017877-9017932)
chr3 (73-128)||(33994651-33994706)
chr3 (78-125)||(37041934-37041981)
chr3 (134-189)||(55415415-55415470)
chr3 (79-125)||(26832071-26832117)
chr3 (78-128)||(52325176-52325226)
chr3 (73-126)||(32023161-32023214)
chr3 (77-122)||(47684765-47684810)
chr3 (77-125)||(26134764-26134812)
chr3 (77-125)||(38600867-38600915)
chr3 (78-126)||(42547166-42547214)
chr3 (77-125)||(45392088-45392136)
chr3 (134-189)||(10855070-10855125)
chr3 (134-189)||(11251103-11251158)
chr3 (77-132)||(15082001-15082055)
chr3 (134-189)||(21296479-21296534)
chr3 (78-128)||(30261559-30261610)
chr3 (134-189)||(33994733-33994788)
chr3 (78-125)||(34081116-34081163)
chr3 (134-189)||(39866529-39866584)
chr3 (142-189)||(54845492-54845539)
chr3 (87-125)||(39825833-39825871)
chr3 (77-126)||(9218143-9218192)
chr3 (76-125)||(46786042-46786091)
chr3 (73-126)||(54021518-54021571)
chr3 (78-126)||(1923089-1923137)
chr3 (78-126)||(39329810-39329858)
chr3 (78-126)||(48409583-48409631)
[»] chr8 (37 HSPs)
chr8 (73-128)||(29615792-29615847)
chr8 (73-128)||(44790480-44790535)
chr8 (75-128)||(32967335-32967388)
chr8 (76-128)||(45425482-45425534)
chr8 (73-128)||(5392043-5392098)
chr8 (73-128)||(38252496-38252551)
chr8 (78-132)||(27987657-27987711)
chr8 (78-132)||(28044959-28045013)
chr8 (78-126)||(2195467-2195515)
chr8 (78-126)||(7258427-7258475)
chr8 (73-128)||(12653681-12653736)
chr8 (134-189)||(29615874-29615929)
chr8 (74-128)||(5962531-5962585)
chr8 (78-128)||(42412441-42412491)
chr8 (75-132)||(33746273-33746330)
chr8 (78-126)||(27868385-27868433)
chr8 (78-126)||(33826230-33826278)
chr8 (134-189)||(139098-139153)
chr8 (77-128)||(2349348-2349399)
chr8 (81-128)||(10728980-10729027)
chr8 (79-126)||(11637140-11637187)
chr8 (77-128)||(22490389-22490440)
chr8 (73-128)||(28802761-28802816)
chr8 (77-128)||(39171541-39171592)
chr8 (137-187)||(45197690-45197739)
chr8 (132-173)||(138691-138732)
chr8 (83-128)||(5423222-5423267)
chr8 (75-128)||(34287137-34287190)
chr8 (78-126)||(8418362-8418410)
chr8 (89-125)||(9014610-9014646)
chr8 (78-126)||(14689959-14690007)
chr8 (78-126)||(14748766-14748814)
chr8 (92-128)||(21587290-21587326)
chr8 (78-126)||(28791307-28791355)
chr8 (134-186)||(31410587-31410639)
chr8 (137-189)||(32241400-32241452)
chr8 (74-126)||(44615425-44615477)
[»] chr1 (39 HSPs)
chr1 (73-128)||(28839333-28839388)
chr1 (73-132)||(8327711-8327770)
chr1 (73-128)||(11324242-11324297)
chr1 (73-128)||(11482263-11482318)
chr1 (77-132)||(38664399-38664454)
chr1 (73-128)||(51749242-51749297)
chr1 (135-189)||(8327794-8327848)
chr1 (77-122)||(42309430-42309475)
chr1 (73-125)||(26755970-26756022)
chr1 (73-125)||(27698806-27698858)
chr1 (78-126)||(29225752-29225800)
chr1 (137-189)||(32587844-32587896)
chr1 (77-128)||(3555614-3555665)
chr1 (134-189)||(42926210-42926265)
chr1 (77-128)||(45889307-45889358)
chr1 (73-128)||(46536334-46536389)
chr1 (135-189)||(28839416-28839470)
chr1 (132-189)||(36467172-36467229)
chr1 (75-128)||(46496014-46496067)
chr1 (75-128)||(49494222-49494275)
chr1 (73-109)||(19532997-19533033)
chr1 (78-126)||(25842598-25842646)
chr1 (78-126)||(35622840-35622888)
chr1 (78-126)||(36232850-36232898)
chr1 (137-189)||(46273239-46273291)
chr1 (77-125)||(50267500-50267548)
chr1 (77-128)||(8773240-8773291)
chr1 (74-125)||(36467257-36467308)
chr1 (77-128)||(48242649-48242700)
chr1 (134-189)||(52830391-52830446)
chr1 (78-132)||(10587636-10587690)
chr1 (135-189)||(51749160-51749214)
chr1 (138-187)||(6787327-6787376)
chr1 (77-126)||(17724775-17724824)
chr1 (87-128)||(27831854-27831895)
chr1 (76-125)||(28277100-28277149)
chr1 (73-125)||(7785336-7785388)
chr1 (74-118)||(7787672-7787716)
chr1 (78-126)||(29756203-29756251)
[»] chr5 (37 HSPs)
chr5 (74-128)||(11099536-11099590)
chr5 (135-180)||(41594833-41594878)
chr5 (134-189)||(11099454-11099509)
chr5 (73-128)||(17243013-17243068)
chr5 (73-128)||(20189886-20189941)
chr5 (77-128)||(35334585-35334636)
chr5 (75-132)||(858331-858388)
chr5 (137-189)||(28057807-28057859)
chr5 (73-128)||(4412377-4412432)
chr5 (78-125)||(6173042-6173089)
chr5 (73-128)||(13135747-13135802)
chr5 (77-128)||(41184115-41184166)
chr5 (75-125)||(7613703-7613753)
chr5 (73-122)||(13717004-13717053)
chr5 (137-182)||(24231089-24231134)
chr5 (85-126)||(25344799-25344840)
chr5 (134-187)||(35646068-35646121)
chr5 (78-126)||(72166-72214)
chr5 (78-126)||(39212612-39212660)
chr5 (73-128)||(3725180-3725235)
chr5 (139-186)||(5816814-5816861)
chr5 (78-125)||(6629455-6629502)
chr5 (78-125)||(13422414-13422461)
chr5 (73-128)||(33988194-33988249)
chr5 (134-189)||(33988276-33988331)
chr5 (73-128)||(42575697-42575752)
chr5 (78-128)||(39183686-39183736)
chr5 (78-124)||(41268337-41268383)
chr5 (75-125)||(42211329-42211379)
chr5 (78-132)||(42479541-42479595)
chr5 (76-125)||(6610834-6610883)
chr5 (79-128)||(6735416-6735465)
chr5 (75-132)||(8692873-8692930)
chr5 (87-128)||(42871046-42871087)
chr5 (87-123)||(86981-87017)
chr5 (76-128)||(33012351-33012403)
chr5 (1-45)||(41686636-41686680)
[»] chr6 (14 HSPs)
chr6 (73-128)||(15081417-15081472)
chr6 (73-128)||(30064007-30064062)
chr6 (77-132)||(33109371-33109426)
chr6 (83-128)||(117083-117128)
chr6 (78-126)||(33018004-33018052)
chr6 (78-126)||(34441890-34441938)
chr6 (78-125)||(2310349-2310396)
chr6 (73-128)||(7301138-7301193)
chr6 (134-189)||(31265855-31265910)
chr6 (134-187)||(2657977-2658030)
chr6 (78-126)||(4552908-4552956)
chr6 (137-189)||(7739494-7739546)
chr6 (78-126)||(15321285-15321333)
chr6 (78-126)||(15371923-15371971)
[»] scaffold0221 (1 HSPs)
scaffold0221 (75-128)||(8883-8936)
[»] scaffold0058 (1 HSPs)
scaffold0058 (77-128)||(14454-14505)
[»] scaffold0001 (1 HSPs)
scaffold0001 (73-128)||(394772-394827)
[»] scaffold0227 (1 HSPs)
scaffold0227 (141-189)||(8949-8997)
[»] scaffold0321 (1 HSPs)
scaffold0321 (73-116)||(9619-9662)
[»] scaffold0045 (1 HSPs)
scaffold0045 (77-128)||(26320-26371)
[»] scaffold0034 (2 HSPs)
scaffold0034 (73-128)||(98819-98874)
scaffold0034 (134-189)||(98901-98956)
[»] scaffold0028 (1 HSPs)
scaffold0028 (77-128)||(26611-26662)
[»] scaffold0086 (1 HSPs)
scaffold0086 (77-126)||(5816-5865)
[»] scaffold0003 (1 HSPs)
scaffold0003 (134-175)||(352451-352492)
[»] scaffold0262 (1 HSPs)
scaffold0262 (78-126)||(12496-12544)


Alignment Details
Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 10394433 - 10394259
Alignment:
Q  1 gagccatttttcaaaataaagtgtcccaaaataaccgagttattttcaatacaataataattacnnnnnnnctccctttataactataattaatactact 100  Q
    |||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||          ||||||||||||||||||||||| |       
T  10394433 gagccattttccaaaataaagtgtcccaaaataactgagtcattttcaatacaataataatt---ttttttttccctttataactataattaatatt--- 10394340  T
Q  101 ttcatcattcccaatttaatatattccattttccaccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10394339 --------tcccaatttaatatattccattttccaccaatacttaacaaaaacatttaaaattatttttctctctccttcttttataca 10394259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 6075497 - 6075568
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattccattttccaccaatacttaacaa 149  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||| | ||| ||| ||||||||||||    
T  6075497 ttataactctaattaatactactttcatcactcccaatttaatatattctactttgcactaatacttaacaa 6075568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 28108488 - 28108433
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  28108488 tccctttataactctaattaatactactttcatcattctcaattcaatatattcca 28108433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 30757677 - 30757626
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  30757677 tttataactctaattaatactactttcatcattcccaattcaatatattcca 30757626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 41436077 - 41436128
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  41436077 tttataactctaattaatactactttcatcattctcaattcaatatattcca 41436128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 10393498 - 10393440
Alignment:
Q  232 acataccacacacacgaattgttaaaaaacgttaggttatcatcggacaatctgatgtc 290  Q
    ||||||| ||| |||||||||||||||||||||||||||||||  |||||||| |||||    
T  10393498 acataccgcacgcacgaattgttaaaaaacgttaggttatcatgagacaatctaatgtc 10393440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 43950476 - 43950424
Alignment:
Q  137 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||||||||||| |||||||||||||| |||  |||||||    
T  43950476 caatacttaacaaaaacatttaaaactatttttctctctctttcacttataca 43950424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 44424371 - 44424323
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  44424371 ttataactctaattaatactactttcatcattctcaattcaatatattc 44424323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 43077757 - 43077702
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||| |||||||  |||||||||| |||||||||||||||||| ||||||||    
T  43077757 caccaatagttaacaagtacatttaaaactatttttctctctcattcatttataca 43077702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 8031737 - 8031787
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||| |||||||||||||||| ||||||| ||||| ||||||||    
T  8031737 cctttataactttaattaatactacttttatcattcacaattcaatatatt 8031787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 33755334 - 33755388
Alignment:
Q  135 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||| |||| ||||||| ||||||||||||| ||| ||||||||    
T  33755334 accaatacttaacaataacacttaaaatcatttttctctctccttcatttataca 33755388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 43427194 - 43427140
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    |||||||  ||||||||||||||||||||| |||||||| ||||||||| |||||    
T  43427194 ttataacactaattaatactactttcatcactcccaattcaatatattctatttt 43427140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 435184 - 435139
Alignment:
Q  80 ataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||||    
T  435184 ataactttaattaatactactttcatcattctcaattcaatatatt 435139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 33880152 - 33880205
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||||||||| ||||||||| |||||||| || |||||||| |||||||||    
T  33880152 tccctttataactctaattaatattactttcaccactcccaattcaatatattc 33880205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 7648979 - 7648927
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||| | |||||||||||| |||||||| |||||||| ||||||||    
T  7648979 tccctttataattctaattaatactattttcatcactcccaattcaatatatt 7648927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 18181321 - 18181273
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||||||||||||| |||||||||| || ||||||    
T  18181321 ttataactctaattaatactactttcattattcccaattcaaaatattc 18181273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 23684957 - 23685005
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||| ||||||||||||||||||||| || ||||| ||||||||    
T  23684957 tttataactctaattaatactactttcatcactctcaattcaatatatt 23685005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 26273758 - 26273806
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||| | ||||||||||||||||||||| |||||||| |||||||||    
T  26273758 ttataaatttaattaatactactttcatcactcccaattcaatatattc 26273806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 28301432 - 28301480
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||| ||||||||||||||||||||| || ||||| ||||||||    
T  28301432 tttataactctaattaatactactttcatcactctcaattcaatatatt 28301480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 28925961 - 28925909
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  28925961 tccctttataactctaattaatactgttttgatcattcccaattcaatatatt 28925909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 33751455 - 33751503
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaata 121  Q
    ||||||||||||| ||||||||||||||||||||| || ||||| ||||    
T  33751455 tccctttataactctaattaatactactttcatcactctcaattcaata 33751503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 41436158 - 41436209
Alignment:
Q  137 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||||||||| ||||||||| |||||||||| |||| ||||||||    
T  41436158 caatacttaacaaaaacacttaaaatta-ttttctctctaattcatttataca 41436209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 3100394 - 3100449
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||| ||||| ||||||||||||||||||  | | ||||||||||||||||||    
T  3100394 tccctttgtaactctaattaatactactttcacaacttccaatttaatatattcca 3100449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 3199897 - 3199944
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||| |||||||||||||||||| || |||||||| ||||||||    
T  3199897 ttataactctaattaatactactttcaccactcccaattcaatatatt 3199944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 8550750 - 8550703
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||||||||||||||||||||||||| ||  |||| ||||||||    
T  8550750 ttataactataattaatactactttcatcactcttaattcaatatatt 8550703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 24775839 - 24775784
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||   || ||||||||||||||||||||| ||| ||||||||    
T  24775839 caccaatacttaacaagtgcacttaaaattatttttctctctccttcatttataca 24775784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 4794572 - 4794622
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||| ||||||||||||||||||||| |  ||||| |||||||||||    
T  4794572 ttataactctaattaatactactttcatcactttcaattcaatatattcca 4794622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 13375301 - 13375251
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||| ||||||||| || ||||||||||| ||||| ||||||||    
T  13375301 cctttataactctaattaatattattttcatcattctcaattcaatatatt 13375251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 44534513 - 44534459
Alignment:
Q  135 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||| |||||||||||| |||||| ||| || ||| ||||||||    
T  44534513 accaatacttaacaagaacatttaaaatcatttttttctgtccttcatttataca 44534459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 33275806 - 33275761
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatata 123  Q
    |||||| | ||||||||| |||||||||||||||||||| ||||||    
T  33275806 ttataattttaattaatattactttcatcattcccaattcaatata 33275761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 38282532 - 38282483
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||| | ||||||||| |||||||| || ||||||||||||||||||    
T  38282532 tttataattctaattaatattactttcaccactcccaatttaatatattc 38282483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 2756673 - 2756721
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| |||||||||||| || ||||| | ||||||||||||||||    
T  2756673 ttataactctaattaatactatttacatcacttccaatttaatatattc 2756721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 5425856 - 5425904
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||| | ||| |||||||| ||||||||||||||||| |||||||||    
T  5425856 ttataaatctaactaatactaatttcatcattcccaattcaatatattc 5425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 9472421 - 9472469
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||||||||||||||||||||||| || |  ||||| |||||||||    
T  9472421 ttataactataattaatactactttcaccactatcaattcaatatattc 9472469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 28572205 - 28572261
Alignment:
Q  76 ctttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    |||||||||| ||||||||||||||||||  | | |||||| |||||||| ||||||    
T  28572205 ctttataactgtaattaatactactttcacaacttccaattcaatatatttcatttt 28572261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 31348510 - 31348558
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||  |||||||||||||||||| |||||| |||| |||||||||    
T  31348510 ttataacactaattaatactactttcaccattcctaattcaatatattc 31348558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 37247997 - 37247945
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||| ||||||||| |||||||||||  | ||||| ||||||||    
T  37247997 tccctttataactctaattaatattactttcatcacactcaattcaatatatt 37247945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 40965046 - 40965082
Alignment:
Q  73 tccctttataactataattaatactactttcatcatt 109  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  40965046 tccctttataactctaattaatattactttcatcatt 40965082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 40965093 - 40965145
Alignment:
Q  137 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||  || |||||| |||||||||||||| ||| ||||||||    
T  40965093 caatacttaacaaatgcacttaaaactatttttctctctccttcatttataca 40965145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 43077835 - 43077787
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||| ||||||||| |||||||||||||  ||||| ||||||||    
T  43077835 tttataactctaattaatattactttcatcattttcaattcaatatatt 43077787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 44024717 - 44024749
Alignment:
Q  78 ttataactataattaatactactttcatcattc 110  Q
    ||||||||||||||||||||| |||||||||||    
T  44024717 ttataactataattaatactattttcatcattc 44024749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 45890950 - 45890834
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattccattttccaccaatacttaacaaaaacatttaaaattatttttctc 172  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||  | |||| ||||||||||||||||| |||||||||  |||||||||    
T  45890950 tccctttataactataattaatattactttcatcatttccaattcaatatattttactttcaaccaatacttaacaaaagcatttaaaaccatttttctc 45890851  T
Q  173 tctcattcttttataca 189  Q
    |||| ||||||||||||    
T  45890850 tctccttcttttataca 45890834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 33584557 - 33584616
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  33584557 tccctttataactataattaatactactttcatcactcccaattcaatatattccatttt 33584616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 29434692 - 29434638
Alignment:
Q  74 ccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  29434692 ccctttataactctaattaatactactttcatcattcacaattcaatatattcca 29434638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 29257541 - 29257596
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||    
T  29257541 tccctttataactctaattaatattactttcatcactcccaattcaatatattcca 29257596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 31581552 - 31581497
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||| |||||||||||||||||||||||  ||||| |||||||||||||||    
T  31581552 tttataactctaattaatactactttcatcattttcaattcaatatattccatttt 31581497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 34963924 - 34963872
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||    
T  34963924 tccctttataactctaattaatattactttcatcattctcaattaaatatatt 34963872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 2846785 - 2846734
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  2846785 tttataactctaattaatactactttcatcaattccaattcaatatattcca 2846734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 30463014 - 30463069
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||| ||||||||| |||||||||||||  ||||| |||||||||||||||    
T  30463014 tttataactctaattaatattactttcatcattttcaattcaatatattccatttt 30463069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 37490649 - 37490594
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||| ||| ||||||||    
T  37490649 caccaatacttaaaaaaaacacttaaaatcatttttctctctccttcatttataca 37490594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 44604508 - 44604454
Alignment:
Q  135 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||| |||| ||||||| ||||||||||||| ||| ||||||||    
T  44604508 accaatacttaacaagaacacttaaaatcatttttctctctccttcatttataca 44604454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 48981652 - 48981705
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| | ||||||| |||||||| |||||| ||||||||||||||||||    
T  48981652 cctttataattctaattaacactacttttatcatttccaatttaatatattcca 48981705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 29434613 - 29434569
Alignment:
Q  132 tccaccaatacttaacaaaaacatttaaaattatttttctctctc 176  Q
    |||||||||||||||||||| || |||||| ||||||||||||||    
T  29434613 tccaccaatacttaacaaaagcacttaaaactatttttctctctc 29434569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 37264312 - 37264360
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| |||||||||||||||||| || |||||||| |||||||||    
T  37264312 ttataactctaattaatactactttcaccactcccaattcaatatattc 37264360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 37496505 - 37496457
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||||||||||||||| || ||||| |||||||||    
T  37496505 ttataactttaattaatactactttcatcactctcaattcaatatattc 37496457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 40038137 - 40038085
Alignment:
Q  137 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||| | ||||||||||||||||||||| || ||| ||||||||    
T  40038137 caatacttaacaagatcatttaaaattatttttctctttccttcatttataca 40038085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 47453998 - 47454034
Alignment:
Q  73 tccctttataactataattaatactactttcatcatt 109  Q
    |||||||||||||||||||| ||||||||||||||||    
T  47453998 tccctttataactataattattactactttcatcatt 47454034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 23703914 - 23703969
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||| |||||||||||||||| ||||||  ||||| |||||||| ||||||    
T  23703914 tttataactctaattaatactacttttatcattttcaattcaatatatttcatttt 23703969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 25778743 - 25778790
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||| ||||||||||||||||||||| | |||||| ||||||||    
T  25778743 ttataactctaattaatactactttcatcacttccaattcaatatatt 25778790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 25940856 - 25940809
Alignment:
Q  79 tataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||| ||||||||||||||||||||| ||  ||||||||||||||    
T  25940856 tataactctaattaatactactttcatcactctaaatttaatatattc 25940809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 28333171 - 28333218
Alignment:
Q  79 tataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||| ||||||||| ||||||||||| |||||||| |||||||||    
T  28333171 tataactctaattaatattactttcatcactcccaattcaatatattc 28333218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 30463092 - 30463147
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||   || |||||| |||||||||||||||||| ||||||||    
T  30463092 caccaatacttaacaagtgcacttaaaactatttttctctctcattcatttataca 30463147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 36117655 - 36117710
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||||||||  ||||||||||||  ||||| |||||||||||    
T  36117655 tccctttataactttaattaatatcactttcatcattttcaattcaatatattcca 36117710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 44604586 - 44604535
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| ||||||||||||||||||||| || ||| | |||||||||||    
T  44604586 tttataactctaattaatactactttcatcactctcaactcaatatattcca 44604535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 46288544 - 46288489
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||||||||||||| | |  ||||| |||||||||||    
T  46288544 tccctttataactctaattaatactactttcataactttcaattcaatatattcca 46288489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 2846706 - 2846652
Alignment:
Q  135 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||| | || |||||| |||||||||||||| ||| ||||||||    
T  2846706 accaatacttaacaagagcacttaaaactatttttctctctcgttcatttataca 2846652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 27234503 - 27234549
Alignment:
Q  79 tataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||| |||||||||||| |||||||| || ||||||||||||||    
T  27234503 tataactttaattaatactattttcatcactcacaatttaatatatt 27234549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 29645265 - 29645223
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctc 176  Q
    |||||||||||||||| |||| ||||||||| |||||||||||    
T  29645265 caccaatacttaacaagaacacttaaaattaattttctctctc 29645223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Complemental strand, 40038222 - 40038176
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaata 121  Q
    ||||||||||| ||||||||||||||||||||| | | |||||||||    
T  40038222 cctttataactctaattaatactactttcatcacttcaaatttaata 40038176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 18235266 - 18235319
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttata 187  Q
    ||||||||||||||||   ||||||||||||||||| |||||| ||| ||||||    
T  18235266 caccaatacttaacaagtgcatttaaaattatttttttctctccttcatttata 18235319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 37157168 - 37157217
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||||| |||||||||||  ||||||||||  |||||||||||||||    
T  37157168 tttataactctaattaatacttttttcatcattttcaatttaatatattc 37157217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 49100613 - 49100560
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||| |||||||| ||| ||| |||||| |||||| |||||||||||    
T  49100613 cctttataactttaattaattctatttttatcatttccaattcaatatattcca 49100560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 2842161 - 2842113
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||| ||||||||||||||||||||||| ||  |||| ||||||||    
T  2842161 tttataattataattaatactactttcatcactctaaattcaatatatt 2842113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 5724816 - 5724768
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||| ||||||||||||||||| ||||| | |||| ||||||||    
T  5724816 tttataactctaattaatactactttcttcatttctaattcaatatatt 5724768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 7425909 - 7425853
Alignment:
Q  134 caccaatacttaa-caaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||| ||| |||| ||||||  ||||||||||||||||| ||||||||    
T  7425909 caccaatacttaaacaagaacacttaaaaccatttttctctctcattcatttataca 7425853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 11616555 - 11616611
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaa-tatattcca 128  Q
    ||||||||||||| |||||||||| ||||||| || |||||||| || |||||||||    
T  11616555 tccctttataactctaattaatacaactttcaccactcccaattcaattatattcca 11616611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 14649027 - 14648979
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||| ||||||||||| || ||||| |||||||||    
T  14649027 ttataactctaattaatattactttcatcactctcaattcaatatattc 14648979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 32775982 - 32776030
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||| |||||||||||||| || |||||||| |||||||||    
T  32775982 ttataactctaaataatactactttcaccactcccaattcaatatattc 32776030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 34064214 - 34064262
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||| ||||||||||| || ||||| |||||||||    
T  34064214 ttataactctaattaatattactttcatcactctcaattcaatatattc 34064262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 38181984 - 38181928
Alignment:
Q  76 ctttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    |||||||||| ||||||||||||||||||  | | |||||| ||||||||| |||||    
T  38181984 ctttataactctaattaatactactttcacaacttccaattcaatatattctatttt 38181928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 38589733 - 38589781
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||  |||||||||||||||||| || |||||||| |||||||||    
T  38589733 ttataacactaattaatactactttcaccactcccaattcaatatattc 38589781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 2906684 - 2906794
Alignment:
Q  79 tataactataattaatactactttcatcattcccaatttaatatattccattttccaccaatacttaacaaaaacatttaaaattatttttctctctcat 178  Q
    ||||||| ||||||||| || |||||||| || ||||||||||||||||| | | |||||||||||||| |||||||||||||  ||||||| |||||||    
T  2906684 tataactctaattaatattattttcatcactcacaatttaatatattccactatgcaccaatacttaacgaaaacatttaaaaccatttttcactctcat 2906783  T
Q  179 tcttttataca 189  Q
    || ||||||||    
T  2906784 tcatttataca 2906794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 32559161 - 32559216
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  32559161 tttataactctaattaatactactttcatcactcctaatttaatatattccatttt 32559216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 39258385 - 39258326
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||||||| ||||||||| ||||||||||| || |||||||||||||||||||||    
T  39258385 tccctttataactttaattaataatactttcatcactctcaatttaatatattccatttt 39258326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 42024314 - 42024259
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||||||||||||||||||||||||| | |||||| |||||||||||    
T  42024314 tccctttataactataattaatactactttcatcacttccaattcaatatattcca 42024259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 29644353 - 29644402
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  29644353 tttataactataattaatactactttcatcattctcaattcaatatattc 29644402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 38976985 - 38977040
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||||||||||||||||||||||  ||||| |||||||||||    
T  38976985 tccctttataactctaattaatactactttcatcattttcaattcaatatattcca 38977040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 41710257 - 41710202
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||    
T  41710257 tccctttataactctaattaatattactttcatcactcccaattcaatatattcca 41710202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 39979775 - 39979829
Alignment:
Q  74 ccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||||||| ||||||||| ||||||||||||| |||||| |||||||||||    
T  39979775 ccctttataactctaattaatattactttcatcatttccaattcaatatattcca 39979829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 4360515 - 4360466
Alignment:
Q  79 tataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  4360515 tataactctaattaatactactttcatcattcacaattcaatatattcca 4360466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 49306583 - 49306636
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||| ||||||||||||||||||||| ||| |||| |||||||||||    
T  49306583 cctttataactctaattaatactactttcatcactcctaattcaatatattcca 49306636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 40021056 - 40021008
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||||||    
T  40021056 ttataactctaattaatactactgtcatcactcccaatttaatatattc 40021008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 4357641 - 4357696
Alignment:
Q  132 tccaccaatacttaacaaaaacatttaaaattatttttctctctcattcttttata 187  Q
    ||||||||||||||||||||||| ||||||| || |||||||||| ||| ||||||    
T  4357641 tccaccaatacttaacaaaaacacttaaaatcatctttctctctccttcatttata 4357696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 26799325 - 26799270
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||| ||||||||| |||||||||||||| ||||| ||||||||| |||||    
T  26799325 tttataactctaattaatagtactttcatcattctcaattcaatatattctatttt 26799270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 35909604 - 35909549
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||| ||| |||||||||||||| ||| |||||| ||||||||    
T  35909604 caccaatacttaacaaatacacttaaaattatttttatctttcattcatttataca 35909549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 49448840 - 49448887
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  49448840 ttataactctaattaatactactttcatcattctcaattcaatatatt 49448887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 49812223 - 49812278
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||  |||||||||||    
T  49812223 tccctttataactctaattaatactattttcatctttcccaatacaatatattcca 49812278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 54729511 - 54729460
Alignment:
Q  138 aatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||| |||||| |||||||||||||| ||| ||||||||    
T  54729511 aatacttaacaaaaacacttaaaactatttttctctctctttcatttataca 54729460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 18509446 - 18509492
Alignment:
Q  79 tataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  18509446 tataactataattaataatactttcatcactcccaattcaatatatt 18509492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 43335131 - 43335074
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattccattttcca 135  Q
    |||| ||||||||||||||||||||| ||| || ||||| ||||||||||| ||||||    
T  43335131 ttatgactataattaatactactttcttcactctcaattcaatatattccactttcca 43335074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 3686006 - 3686058
Alignment:
Q  74 ccctttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||||||| ||||||||| ||||||||||| || ||||| |||||||||    
T  3686006 ccctttataactctaattaatattactttcatcactctcaattcaatatattc 3686058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 4354447 - 4354495
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||||||||||||||||||||||  | || |||||||||||||||    
T  4354447 ttataactataattaatactactttcacaactctcaatttaatatattc 4354495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 4357566 - 4357614
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||| |||||||||||| |||||||| |||||||| ||||||||    
T  4357566 tttataactctaattaatactattttcatcactcccaattcaatatatt 4357614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 35998230 - 35998178
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||| |||||||||||||||||| || || ||||| ||||||||    
T  35998230 tccctttataactctaattaatactactttcaccactctcaattcaatatatt 35998178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 41436480 - 41436528
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| |||||||||||||||||||||||| ||||| || ||||||    
T  41436480 ttataactctaattaatactactttcatcattcgcaattcaaaatattc 41436528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 42185905 - 42185857
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||| ||||||||||||||||||||| || ||||| ||||||||    
T  42185905 tttataactctaattaatactactttcatcactctcaattcaatatatt 42185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 8294962 - 8295075
Alignment:
Q  13 aaaataaagtgtcccaaaataaccgagttattt------tcaatacaataataattacnnnnnnnctccctttataactataattaatactactttcatc 106  Q
    |||| ||||||||||||||||||||||| ||||      ||||||||||| |||||||        ||||||||||||| ||||| ||||||||||||||    
T  8294962 aaaaaaaagtgtcccaaaataaccgagtcatttcacttttcaatacaatattaattacctttt---tccctttataactctaatttatactactttcatc 8295058  T
Q  107 attcccaatttaatatatt 125  Q
      |||||||| ||||||||    
T  8295059 --tcccaattcaatatatt 8295075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 17237117 - 17237172
Alignment:
Q  132 tccaccaatacttaacaaaaacatttaaaattatttttctctctcattcttttata 187  Q
    ||||| |||||||||||||| || |||||| |||||||||||||| ||| ||||||    
T  17237117 tccactaatacttaacaaaatcacttaaaactatttttctctctccttcatttata 17237172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 121
Target Start/End: Complemental strand, 22496789 - 22496742
Alignment:
Q  74 ccctttataactataattaatactactttcatcattcccaatttaata 121  Q
    |||||||||||| ||||||||||||||||||||  || ||||||||||    
T  22496789 ccctttataactctaattaatactactttcatcgctctcaatttaata 22496742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 27977223 - 27977278
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||||||| ||||||| ||||||| |||| |||  ||||||||    
T  27977223 caccaatacttaacaaaaacacttaaaatcatttttcactctaatttatttataca 27977278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 47277790 - 47277743
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||||||||||||||| |||| || ||||| ||||||||    
T  47277790 ttataactataattaatactactttaatcactctcaattcaatatatt 47277743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 47846898 - 47846945
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||| ||||||||||||||||||||| ||| |||| ||||||||    
T  47846898 ttataactctaattaatactactttcatcactcctaattcaatatatt 47846945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 54729596 - 54729542
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||||||||||||||||||||  | ||||| |||||||||||    
T  54729596 tccctttataactctaattaatactactttcatca-cctcaattcaatatattcca 54729542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 4360439 - 4360385
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttatac 188  Q
    |||||||||||||||||| || ||||||  |||||||||| |||||| |||||||    
T  4360439 caccaatacttaacaaaagcacttaaaaccatttttctctttcattcatttatac 4360385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 22872496 - 22872446
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||| ||||||||| ||||||||||| || ||||| |||||||||||    
T  22872496 ttataactctaattaatattactttcatcactctcaattcaatatattcca 22872446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 37309694 - 37309744
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||| ||||||||| ||||||||||| || ||||| ||||||||    
T  37309694 cctttataactctaattaatattactttcatcactctcaattcaatatatt 37309744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 40020979 - 40020933
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattc 180  Q
    ||||||||||| ||||||||||| ||||  |||||||||||||||||    
T  40020979 caccaatacttgacaaaaacattcaaaaccatttttctctctcattc 40020933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 39053010 - 39052961
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||||| |||||||||||||||||| || || ||||| |||||||||    
T  39053010 tttataactctaattaatactactttcaccactctcaattcaatatattc 39052961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 42544205 - 42544258
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||| ||||||||| |||||| |||| || ||||| |||||||||||    
T  42544205 cctttataactctaattaatattacttttatcactcacaattcaatatattcca 42544258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 9052158 - 9052110
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||  ||||||||||||||||||||||||  |||| |||||||||    
T  9052158 ttataacactaattaatactactttcatcattctgaattcaatatattc 9052110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 10099833 - 10099785
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||||||||||||  | |||||||| |||||||||    
T  10099833 ttataactctaattaatactactttcacaactcccaattcaatatattc 10099785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 21954535 - 21954491
Alignment:
Q  81 taactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||||||||||| ||||||||||||| ||||| | ||||||    
T  21954535 taactataattaatacaactttcatcattcacaattcagtatatt 21954491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 22020618 - 22020570
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| |||||| ||||||||||| ||||| ||||| |||||||||    
T  22020618 ttataactctaattattactactttcaccattctcaattcaatatattc 22020570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 25250701 - 25250653
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| |||||||||||| |||||||| ||  ||||||||||||||    
T  25250701 ttataactctaattaatactagtttcatcactcttaatttaatatattc 25250653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 29550835 - 29550787
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||||||||||||  | |||||||| |||||||||    
T  29550835 ttataactctaattaatactactttcacaactcccaattcaatatattc 29550787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 38319910 - 38319958
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||  ||||||||||||||||||||| || ||||| |||||||||    
T  38319910 ttataacactaattaatactactttcatcactctcaattcaatatattc 38319958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 39976500 - 39976448
Alignment:
Q  76 ctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||||  | ||||||||||||||||||| || ||||| |||||||||||    
T  39976500 ctttataacactgattaatactactttcatcactctcaattcaatatattcca 39976448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 44020872 - 44020820
Alignment:
Q  76 ctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||||| |||| |||||||||||||||||| | |||| ||||| |||||    
T  44020872 ctttataactctaatcaatactactttcatcatttctaattcaatatgttcca 44020820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 47787956 - 47787924
Alignment:
Q  77 tttataactataattaatactactttcatcatt 109  Q
    ||||||||| |||||||||||||||||||||||    
T  47787956 tttataactctaattaatactactttcatcatt 47787924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 50714596 - 50714636
Alignment:
Q  93 atactactttcatcattcccaatttaatatattccattttc 133  Q
    |||||||||||||||||| ||||| ||||||||||| ||||    
T  50714596 atactactttcatcattctcaattcaatatattccactttc 50714636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 8e-24; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 39365129 - 39365013
Alignment:
Q  74 ccctttataactataattaatactactttcatcattcccaatttaatatattccattttccaccaatacttaacaaaaacatttaaaatta-tttttctc 172  Q
    |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||| |||||||||||||||| | || ||||||  | ||||||||    
T  39365129 ccctttataactctaattaatactattttcatcattcccaattcaatatattccactttgcaccaatacttaacaagagcacttaaaaccactttttctc 39365030  T
Q  173 tctcattcttttataca 189  Q
    |||| ||  ||||||||    
T  39365029 tctcctttatttataca 39365013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 54493902 - 54493954
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  54493902 tccctttataactctaattaatactactttcatcatttccaatttaatatatt 54493954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 54122255 - 54122200
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  54122255 caccaatacttaacaaaaacatttaaaactatttttctctctccttcatttataca 54122200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 15280603 - 15280661
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattccattttcca 135  Q
    ||||||||  ||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  15280603 tttataaccctaattaatactactttcatcactcccaattcaatatattccactttcca 15280661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 32827417 - 32827365
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||| ||||||||||||||||||||||| | |||| ||||||||    
T  32827417 tccctttataactctaattaatactactttcatcatttctaattcaatatatt 32827365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 41031570 - 41031618
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  41031570 tttataactttaattaatactactttcatcatttccaattcaatatatt 41031618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 1334892 - 1334841
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||||||| |||||||||||||||||| || |||||||| |||||||||    
T  1334892 cctttataactctaattaatactactttcaccactcccaattcaatatattc 1334841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 5245406 - 5245461
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||||||||| |||||||||| || ||||| |||||||||||    
T  5245406 tccctttataactctaattaataccactttcatcactctcaattcaatatattcca 5245461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 9017877 - 9017932
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||||||||| || |||||| |||||||||||||| ||| ||||||||    
T  9017877 caccaatacttaacaaaagcacttaaaactatttttctctctctttcatttataca 9017932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 33994651 - 33994706
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||||||||| ||||||||||||| || || |||||||||||    
T  33994651 tccctttataactctaattaataccactttcatcattctcagttcaatatattcca 33994706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 37041981 - 37041934
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  37041981 ttataactctaattaatactactttcatcatttccaattcaatatatt 37041934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 55415470 - 55415415
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||  ||||||||    
T  55415470 caccaatacttaacaaaaacagttaaaaccatttttctctctcatttatttataca 55415415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 26832071 - 26832117
Alignment:
Q  79 tataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||| ||||||||||||||||||||| | |||||||||||||||    
T  26832071 tataactctaattaatactactttcatcactaccaatttaatatatt 26832117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 52325176 - 52325226
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||| ||||||||||||||||| |||||| ||||| |||||||||||    
T  52325176 ttataactctaattaatactactttcgtcattctcaattcaatatattcca 52325226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 32023214 - 32023161
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||||||||| ||||||||| ||||||||||| || ||||| |||||||||    
T  32023214 tccctttataactctaattaatattactttcatcactctcaattcaatatattc 32023161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 47684765 - 47684810
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatat 122  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||||    
T  47684765 tttataactctaattaatactactttcatcactcccaattcaatat 47684810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 26134812 - 26134764
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||| |||||| |||||||||||||| |||||||| ||||||||    
T  26134812 tttataactctaattagtactactttcatcactcccaattcaatatatt 26134764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 38600915 - 38600867
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||| ||||||||||||||||||||| ||||| || ||||||||    
T  38600915 tttataactctaattaatactactttcatcactcccagttcaatatatt 38600867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 42547214 - 42547166
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||| || ||||||||||||||||||||| |||||||| |||||||||    
T  42547214 ttatagctctaattaatactactttcatcactcccaattcaatatattc 42547166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 45392088 - 45392136
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||| ||||||||| ||||||||||||| |||||| ||||||||    
T  45392088 tttataactctaattaatattactttcatcatttccaattcaatatatt 45392136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 10855070 - 10855125
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||| ||| ||||||| |||||| |||||||||||||| ||| ||||||||    
T  10855070 caccaatacataataaaaacacttaaaactatttttctctctccttcatttataca 10855125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 11251158 - 11251103
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||||||| | || ||||||| |||||| |||||||||| ||||||||    
T  11251158 caccaatacttaacaagagcacttaaaatcatttttttctctcattcatttataca 11251103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 15082001 - 15082055
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||| |||||||||||| |||||||| || |||||||||||||| ||||||    
T  15082001 tttataactctaattaatacta-tttcatcactctcaatttaatatatttcatttt 15082055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 21296534 - 21296479
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||||||| | |||||||||| ||||| ||||||| ||| ||||||||    
T  21296534 caccaatacttaacaagagcatttaaaatcattttcctctctccttcatttataca 21296479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 30261610 - 30261559
Alignment:
Q  78 ttataactataattaatactactttcatcattccc-aatttaatatattcca 128  Q
    |||||||| ||||||||||||||||||||| |||| |||| |||||||||||    
T  30261610 ttataactctaattaatactactttcatcactcccaaattcaatatattcca 30261559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 33994733 - 33994788
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||   || ||||||||||||||||||||| ||| ||||||||    
T  33994733 caccaatacttaacaagtgcacttaaaattatttttctctctccttcatttataca 33994788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 34081163 - 34081116
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||| | |||||||||||||||| ||||||| ||||||||||||||    
T  34081163 ttataaatttaattaatactacttttatcattctcaatttaatatatt 34081116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 39866584 - 39866529
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||||||||| || |||||| ||||||||||| || ||| ||||||||    
T  39866584 caccaatacttaacaaaatcacttaaaactatttttctctttccttcatttataca 39866529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 54845539 - 54845492
Alignment:
Q  142 cttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||| |||||| |||||||||||||| ||| ||||||||    
T  54845539 cttaacaaaaacacttaaaactatttttctctctccttcatttataca 54845492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 125
Target Start/End: Original strand, 39825833 - 39825871
Alignment:
Q  87 taattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  39825833 taattaatactactttcatcattctcaattcaatatatt 39825871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 9218143 - 9218192
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||||| ||||||||||||||||||||| || ||||| | |||||||    
T  9218143 tttataactctaattaatactactttcatcactctcaattcattatattc 9218192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 46786091 - 46786042
Alignment:
Q  76 ctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||||| || |||||||||||||||||  |||||||| ||||||||    
T  46786091 ctttataactttagttaatactactttcatcgctcccaattcaatatatt 46786042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 54021571 - 54021518
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||||||| | |||||||||||||||||| || ||| |||| |||||||||    
T  54021571 tccctttataattctaattaatactactttcaccactccgaattcaatatattc 54021518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 1923089 - 1923137
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||  |||||||||||||||||| || |||||||| |||||||||    
T  1923089 ttataacactaattaatactactttcaccactcccaattcaatatattc 1923137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 39329858 - 39329810
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||| | ||||||||||||||||||||| || ||||| |||||||||    
T  39329858 ttataattctaattaatactactttcatcactctcaattcaatatattc 39329810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 48409583 - 48409631
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| |||||||||||||||||| || |||||||| || ||||||    
T  48409583 ttataactctaattaatactactttcaccactcccaattcaacatattc 48409631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 29615792 - 29615847
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  29615792 tccctttataactttaattaatactactttcatcattcccaattcaatatattcca 29615847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 44790535 - 44790480
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  44790535 tccctttataactctaattaatactactttcaccattcccaattcaatatattcca 44790480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 32967388 - 32967335
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  32967388 cctttataactctaattaatactactttcatcattctcaattcaatatattcca 32967335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 45425482 - 45425534
Alignment:
Q  76 ctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  45425482 ctttataactctaattaatattactttcatcattcctaatttaatatattcca 45425534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 5392043 - 5392098
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||||||||||||||||| || |||||||| |||||||||||    
T  5392043 tccctttataactctaattaatactactttcaacactcccaattcaatatattcca 5392098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 38252551 - 38252496
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||| |||||||||||||||||| |||||| |||||||||||    
T  38252551 tccctttataactctaatcaatactactttcatcatttccaattcaatatattcca 38252496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 27987657 - 27987711
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    |||||||||||||||||||||||||||||| || ||||| |||||||| ||||||    
T  27987657 ttataactataattaatactactttcatcactcacaattcaatatatttcatttt 27987711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 28044959 - 28045013
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    |||||||||||||||||||||||||||||| || ||||| |||||||| ||||||    
T  28044959 ttataactataattaatactactttcatcactcacaattcaatatatttcatttt 28045013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 2195467 - 2195515
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  2195467 ttataactctaattaatactactttcatcactcccaattcaatatattc 2195515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 7258475 - 7258427
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  7258475 ttataactctaattaatactactttcatcactcccaattcaatatattc 7258427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 12653681 - 12653736
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| | ||||||| |||||||||||||| ||||| |||||||||||    
T  12653681 tccctttataactctgattaatattactttcatcattctcaattcaatatattcca 12653736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 29615874 - 29615929
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||   |||||||||||||||||||||||| ||| ||||||||    
T  29615874 caccaatacttaacaagtgcatttaaaattatttttctctctccttcatttataca 29615929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 5962585 - 5962531
Alignment:
Q  74 ccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||||||| ||||||||| || |||||||| |||||||| |||||||||||    
T  5962585 ccctttataactctaattaatattaatttcatcactcccaattcaatatattcca 5962531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 42412491 - 42412441
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||| || ||||||||||||||||||||| |||||||| |||||||||||    
T  42412491 ttatagctctaattaatactactttcatcactcccaattcaatatattcca 42412441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 33746330 - 33746273
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    |||||||||||||||||||||||| ||||||||||   |||| |||||||||| ||||    
T  33746330 cctttataactataattaatactattttcatcatttttaattcaatatattccttttt 33746273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 27868433 - 27868385
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||| | |||||||||||||||||||||||| ||||| |||||||||    
T  27868433 ttataattttaattaatactactttcatcattctcaattcaatatattc 27868385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 33826230 - 33826278
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| |||| ||||||||||||||||||| ||||| |||||||||    
T  33826230 ttataactctaatcaatactactttcatcattctcaattcaatatattc 33826278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 139098 - 139153
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||||||| |  ||||||||| |||||| |||||||||| ||||||||    
T  139098 caccaatacttaacaagagaatttaaaatcatttttatctctcattcatttataca 139153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 2349348 - 2349399
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| ||||||||| |||||||| |||| |||||| |||||||||||    
T  2349348 tttataactctaattaatattactttcaacatttccaattcaatatattcca 2349399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 10729027 - 10728980
Alignment:
Q  81 taactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||| |||||||||||||||| |||| |||||||| |||||||||||    
T  10729027 taactctaattaatactactttaatcactcccaattcaatatattcca 10728980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 11637140 - 11637187
Alignment:
Q  79 tataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||||||||||||||||||||| || || ||||| |||||||||    
T  11637140 tataactataattaatactactttcaccactctcaattcaatatattc 11637187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 22490389 - 22490440
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| |||||||||| ||| ||||||||| ||||| |||||||||||    
T  22490389 tttataactctaattaatacaactatcatcattctcaattcaatatattcca 22490440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 28802761 - 28802816
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||| || |||||||| || ||||| |||||||||||    
T  28802761 tccctttataactctaattaataatattttcatcactctcaattcaatatattcca 28802816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 39171541 - 39171592
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| |||||||||||| |||||||| || ||||| |||||||||||    
T  39171541 tttataactctaattaatactattttcatcactcacaattcaatatattcca 39171592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 45197690 - 45197739
Alignment:
Q  137 caatacttaacaaaaacatttaaaattatttttctctctcattcttttata 187  Q
    |||||||||||||||||| ||||||| |||||| |||||||||| ||||||    
T  45197690 caatacttaacaaaaacacttaaaatcattttt-tctctcattcatttata 45197739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 138732 - 138691
Alignment:
Q  132 tccaccaatacttaacaaaaacatttaaaattatttttctct 173  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||    
T  138732 tccaccaatacataacaaaaacacttaaaatcatttttctct 138691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 5423267 - 5423222
Alignment:
Q  83 actataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||||||||||||||| ||||||| ||||| ||||| |||||    
T  5423267 actataattaatactacttttatcattctcaattcaatatcttcca 5423222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 34287190 - 34287137
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| | ||||||||| ||||||||||||| | |||| |||||||||||    
T  34287190 cctttataattctaattaatattactttcatcatttctaattcaatatattcca 34287137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 8418410 - 8418362
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||||||||||||||| || ||||| | |||||||    
T  8418410 ttataactctaattaatactactttcatcactctcaattcagtatattc 8418362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 9014610 - 9014646
Alignment:
Q  89 attaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  9014610 attaatactactttcatcattcacaattcaatatatt 9014646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 14689959 - 14690007
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||  |||||||||||||||||| || |||||||| |||||||||    
T  14689959 ttataacactaattaatactactttcaccactcccaattcaatatattc 14690007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 14748814 - 14748766
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||  |||||||||||||||||| ||||| ||||| |||||||||    
T  14748814 ttataacactaattaatactactttcaccattctcaattcaatatattc 14748766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 21587290 - 21587326
Alignment:
Q  92 aatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||||||||||| |||||||| |||||||||||    
T  21587290 aatactactttcatcactcccaattcaatatattcca 21587326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 28791307 - 28791355
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||||||||||||  | |||||||| |||||||||    
T  28791307 ttataactctaattaatactactttcacaactcccaattcaatatattc 28791355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 31410639 - 31410587
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttat 186  Q
    |||||||| |||||||||||| |||||| | |||||||||||| ||| |||||    
T  31410639 caccaatatttaacaaaaacacttaaaactgtttttctctctccttcatttat 31410587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 32241452 - 32241400
Alignment:
Q  137 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||| |||| ||||||| |||||| |||||| ||| ||||||||    
T  32241452 caatacttaacaagaacacttaaaatcatttttatctctccttcatttataca 32241400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 44615477 - 44615425
Alignment:
Q  74 ccctttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||||||| ||||||||| || |||||||| || ||||| |||||||||    
T  44615477 ccctttataactctaattaatattattttcatcactctcaattcaatatattc 44615425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 28839333 - 28839388
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28839333 tccctttataactataattaatactactttcatcactcccaattcaatatattcca 28839388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 8327711 - 8327770
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||||||    
T  8327711 tccctttataactctaattaatactactttcatcactctcaattcaatatattccatttt 8327770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 11324242 - 11324297
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||||||||||||||||| ||||||| || ||||| |||||||||||    
T  11324242 tccctttataactataattaatactacattcatcactctcaattcaatatattcca 11324297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 11482263 - 11482318
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||||||||||||||||| ||||||| || ||||| |||||||||||    
T  11482263 tccctttataactataattaatactacattcatcactctcaattcaatatattcca 11482318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 38664399 - 38664454
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||    
T  38664399 tttataactctaattaatactactttcatcattcctaattcaatatattcaatttt 38664454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 51749297 - 51749242
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||    
T  51749297 tccctttataactctaattaatattactttcatcactcccaattcaatatattcca 51749242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 8327794 - 8327848
Alignment:
Q  135 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||| | || ||||||||||||||||||||||||| ||||||||    
T  8327794 accaatacttaacaagagcacttaaaattatttttctctctcattcatttataca 8327848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 42309430 - 42309475
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatat 122  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  42309430 tttataactctaattaatactactttcatcattccaaatttaatat 42309475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 26755970 - 26756022
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||| |||||||||||||||||||||||  ||||| ||||||||    
T  26755970 tccctttataactctaattaatactactttcatcattttcaattcaatatatt 26756022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 27698806 - 27698858
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||    
T  27698806 tccctttataactctaattaatattactttcatcattctcaattcaatatatt 27698858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 29225752 - 29225800
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  29225752 ttataactctaattaatactactttcatcactcccaattcaatatattc 29225800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 32587844 - 32587896
Alignment:
Q  137 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||||||||| ||||||||||||||||||| | ||| ||||||||    
T  32587844 caatacttaacaaaaacacttaaaattatttttctctcaccttcatttataca 32587896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 3555665 - 3555614
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| ||||||||||||||||||||  |||||||| |||||||||||    
T  3555665 tttataactctaattaatactactttcatctatcccaattcaatatattcca 3555614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 42926210 - 42926265
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||| |||||||||||||||| ||||||| |||||||||| |||||| ||||||||    
T  42926210 caccgatacttaacaaaaacacttaaaatcatttttctctttcattcatttataca 42926265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 45889358 - 45889307
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| ||||||||||||||||||||||||  |||| |||||||||||    
T  45889358 tttataactctaattaatactactttcatcattcataattcaatatattcca 45889307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 46536334 - 46536389
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||| ||||||| ||||||||||||||||||||| ||  ||||||||||||||||    
T  46536334 tccctctataactctaattaatactactttcatcactcttaatttaatatattcca 46536389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 28839416 - 28839470
Alignment:
Q  135 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||| | ||||||||| |||||||||||||| ||| ||||||||    
T  28839416 accaatacttaacaagagcatttaaaactatttttctctctccttcatttataca 28839470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 36467229 - 36467172
Alignment:
Q  132 tccaccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||||   || |||||| |||||||||||||||||| ||||||||    
T  36467229 tccaccaatacttaacaagtgcacttaaaactatttttctctctcattcatttataca 36467172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 46496014 - 46496067
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||| |||||||||||||||||||||  || |||| |||||||||||    
T  46496014 cctttataactctaattaatactactttcatcacgcctaattcaatatattcca 46496067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 49494275 - 49494222
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||| ||||||||| ||||||||||||| | |||| |||||||||||    
T  49494275 cctttataactttaattaatattactttcatcatttctaattcaatatattcca 49494222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 19533033 - 19532997
Alignment:
Q  73 tccctttataactataattaatactactttcatcatt 109  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19533033 tccctttataactttaattaatactactttcatcatt 19532997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 25842598 - 25842646
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||||||||||| |||||||||||||||| ||||  |||||||||    
T  25842598 ttataactataattaacactactttcatcattctcaatgcaatatattc 25842646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 35622888 - 35622840
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||||||||||||| ||| |||||| |||||||||    
T  35622888 ttataactctaattaatactactttcataattgccaattcaatatattc 35622840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 36232898 - 36232850
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| |||||||||||||||||| |||| |||||| |||||||||    
T  36232898 ttataactctaattaatactactttcaccatttccaattcaatatattc 36232850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 46273239 - 46273291
Alignment:
Q  137 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||| ||||||||||| |||||||||||||| ||| |||| ||||||||    
T  46273239 caatacttgacaaaaacattcaaaattatttttctatcttattcatttataca 46273291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 50267548 - 50267500
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||| | ||||||||| |||||||||||||||||||| ||||||||    
T  50267548 tttataattctaattaatattactttcatcattcccaattcaatatatt 50267500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 8773240 - 8773291
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| ||||||||||||||||||||| | | | ||||||||||||||    
T  8773240 tttataactctaattaatactactttcatcacttctagtttaatatattcca 8773291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 36467308 - 36467257
Alignment:
Q  74 ccctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||  ||||||||||| |||||||||| |||||| ||||||||    
T  36467308 ccctttataactcaaattaatactattttcatcatttccaattcaatatatt 36467257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 48242700 - 48242649
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| ||||||||| |||||| ||||||| ||||| |||||||||||    
T  48242700 tttataactttaattaatattacttttatcattctcaattcaatatattcca 48242649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 52830446 - 52830391
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||||||||  || | ||||||||||||||||||| ||| ||||||||    
T  52830446 caccaatacttaacaaatgcactcaaaattatttttctctctccttcatttataca 52830391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 10587690 - 10587636
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    |||||||  ||||||||||||||||||||| || ||||| ||||||||| |||||    
T  10587690 ttataacactaattaatactactttcatcactctcaattcaatatattctatttt 10587636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 51749214 - 51749160
Alignment:
Q  135 accaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||| |||| ||||||| | ||||||||||| ||| ||||||||    
T  51749214 accaatacttaacaagaacacttaaaatcagttttctctctccttcatttataca 51749160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 6787327 - 6787376
Alignment:
Q  138 aatacttaacaaaaacatttaaaattatttttctctctcattcttttata 187  Q
    |||| |||||||| |||||||||| |||||||||||||| ||| ||||||    
T  6787327 aatatttaacaaatacatttaaaactatttttctctctctttcgtttata 6787376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Complemental strand, 17724824 - 17724775
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||||| |||||||||||| |||||||| |||||||| |||| ||||    
T  17724824 tttataactctaattaatactattttcatcactcccaattcaataaattc 17724775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 27831854 - 27831895
Alignment:
Q  87 taattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||||||||||| |||||||| ||||| |||||    
T  27831854 taattaatactactttcatcactcccaattcaatatcttcca 27831895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 28277149 - 28277100
Alignment:
Q  76 ctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||||| |||||||||| ||||||||||||  ||||| ||||||||    
T  28277149 ctttataactctaattaataccactttcatcattttcaattcaatatatt 28277100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 7785388 - 7785336
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||| |||||||||||||||| |||  || ||||| ||||||||    
T  7785388 tccctttataactctaattaatactacttttatcgctctcaattcaatatatt 7785336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 7787672 - 7787716
Alignment:
Q  74 ccctttataactataattaatactactttcatcattcccaattta 118  Q
    ||||||||||||||||||||||||| || ||||||| ||| ||||    
T  7787672 ccctttataactataattaatactatttccatcatttccacttta 7787716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 29756251 - 29756203
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||  |||||||||||||||||| || |||||||| |||||||||    
T  29756251 ttataacactaattaatactactttcaccactcccaattcaatatattc 29756203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 11099590 - 11099536
Alignment:
Q  74 ccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  11099590 ccctttataactctaattaatactactttcatcactcccaattcaatatattcca 11099536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 41594878 - 41594833
Alignment:
Q  135 accaatacttaacaaaaacatttaaaattatttttctctctcattc 180  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  41594878 accaatacttgacaaaaacatttaaaattatttttctctctcattc 41594833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 11099509 - 11099454
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||||||| |||||| |||||||||||||| ||| ||||||||    
T  11099509 caccaatacttaacaaaaacacttaaaactatttttctctctctttcatttataca 11099454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 17243068 - 17243013
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||||||||||||||| || ||||| |||||||||||    
T  17243068 tccctttataactctaattaatactactttcatcactctcaattcaatatattcca 17243013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 20189886 - 20189941
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||| |||||||||||    
T  20189886 tccctttataactctaattaatattactttcatcattctcaattcaatatattcca 20189941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 35334636 - 35334585
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  35334636 tttataactctaattaatactactttcatcactcccaattcaatatattcca 35334585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 858331 - 858388
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||||| ||||||||||||||||||||| || ||||| |||||||| ||||||    
T  858331 cctttataactctaattaatactactttcatcactctcaattaaatatatttcatttt 858388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 28057859 - 28057807
Alignment:
Q  137 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||||  ||||||||||||||||||||||||| ||| ||||||||    
T  28057859 caatacttaacaagtacatttaaaattatttttctctctccttcatttataca 28057807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 4412377 - 4412432
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||||||||||| |||||||||| | |||| |||||||||||    
T  4412377 tccctttataactctaattaatactattttcatcatttctaattcaatatattcca 4412432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 6173089 - 6173042
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||||    
T  6173089 ttataactataattaatactactttcatcactcacaattcaatatatt 6173042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 13135747 - 13135802
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| |||||| |||||||||||||| ||| |||| |||||||||||    
T  13135747 tccctttataactttaattactactactttcatcactcctaattcaatatattcca 13135802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 41184115 - 41184166
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||| |||||||    
T  41184115 tttataactctaattaatattactttcatcattctcaatttaatttattcca 41184166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 7613703 - 7613753
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    ||||||||||||||||||||| |||||| |||||| |||||| ||||||||    
T  7613703 cctttataactataattaatattacttttatcatttccaattcaatatatt 7613753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 122
Target Start/End: Original strand, 13717004 - 13717053
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatat 122  Q
    ||||||||||||| ||||||||| || ||||||||||| |||||||||||    
T  13717004 tccctttataactctaattaatattattttcatcattctcaatttaatat 13717053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 182
Target Start/End: Original strand, 24231089 - 24231134
Alignment:
Q  137 caatacttaacaaaaacatttaaaattatttttctctctcattctt 182  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||    
T  24231089 caatacttaacaagaacagttaaaatcatttttctctctcattctt 24231134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 25344840 - 25344799
Alignment:
Q  85 tataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  25344840 tataattaatactactttcatcattctcaattcaatatattc 25344799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 35646121 - 35646068
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttata 187  Q
    |||||||||||||||| | || ||||||| ||||||||||||||||| ||||||    
T  35646121 caccaatacttaacaagatcacttaaaatcatttttctctctcattcatttata 35646068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 72214 - 72166
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||| | ||||||||||||||||||||| ||| ||||||||||||||    
T  72214 ttataaatctaattaatactactttcatcactcctaatttaatatattc 72166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 39212660 - 39212612
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||||||||||||||  |||||||| |||||||||    
T  39212660 ttataactctaattaatactactttcatcgctcccaattcaatatattc 39212612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 3725180 - 3725235
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||| ||||||||||| || |||||  ||||||||||    
T  3725180 tccctttataactctaattaatattactttcatcactcacaattcgatatattcca 3725235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 5816814 - 5816861
Alignment:
Q  139 atacttaacaaaaacatttaaaattatttttctctctcattcttttat 186  Q
    |||||||| ||||||||||||||| ||||||||||||| ||| |||||    
T  5816814 atacttaataaaaacatttaaaatcatttttctctctccttcatttat 5816861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 6629502 - 6629455
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||| ||||||||  ||||||||||| |||||||||||||||||    
T  6629502 ttataactctaattaattttactttcatcactcccaatttaatatatt 6629455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 13422461 - 13422414
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||||||||||||| ||||||||||| || ||||| ||||||||    
T  13422461 ttataactataattaatattactttcatcactctcaattcaatatatt 13422414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 33988194 - 33988249
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||| ||| ||||||||| | |||||||| |||||||||||    
T  33988194 tccctttataactctaattcatattactttcattactcccaattcaatatattcca 33988249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 33988276 - 33988331
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||||||| ||||||  |||||||| |||| ||| ||||||||    
T  33988276 caccaatacttaacaaaaacacttaaaaccatttttctttctccttcatttataca 33988331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 42575752 - 42575697
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||||||||||||  | | |||||| |||||||||||    
T  42575752 tccctttataactttaattaatactactttcacaacttccaattcaatatattcca 42575697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 39183736 - 39183686
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||| ||||||||| ||||||||||| || ||||| |||||||||||    
T  39183736 ttataactctaattaatattactttcatcactctcaattcaatatattcca 39183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 41268337 - 41268383
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatat 124  Q
    |||||||||||||||||| ||||||||||| ||| |||| |||||||    
T  41268337 ttataactataattaatattactttcatcactccaaattcaatatat 41268383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 42211329 - 42211379
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||||||  |||||||||||||||||||| || ||||| ||||||||    
T  42211329 cctttataactcaaattaatactactttcatcactcacaattcaatatatt 42211379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 42479541 - 42479595
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    |||||||||||||||||  |||||| ||||||  |||||||||||||| ||||||    
T  42479541 ttataactataattaatgttacttttatcattttcaatttaatatattgcatttt 42479595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 6610834 - 6610883
Alignment:
Q  76 ctttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||||| ||||||||| ||||||||||| ||| |||| ||||||||    
T  6610834 ctttataactttaattaatattactttcatcactccgaattcaatatatt 6610883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 6735465 - 6735416
Alignment:
Q  79 tataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||| ||||||||| ||||||||||| | | ||||||||||||||||    
T  6735465 tataactctaattaatattactttcatcacttcaaatttaatatattcca 6735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 8692930 - 8692873
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||||| ||||||||| ||||||||  | | ||||||||||||||| ||||||    
T  8692930 cctttataactctaattaatattactttcacaacttccaatttaatatatttcatttt 8692873  T

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Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 42871087 - 42871046
Alignment:
Q  87 taattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||||||||||| |||| |||||| |||||||||||||    
T  42871087 taattaatactacttttatcaatcccaagttaatatattcca 42871046  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 86981 - 87017
Alignment:
Q  87 taattaatactactttcatcattcccaatttaatata 123  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  86981 taattaatactactttcatcactccaaatttaatata 87017  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 33012351 - 33012403
Alignment:
Q  76 ctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    |||||||||  || |||||||||||||||||| ||||||||  ||||||||||    
T  33012351 ctttataacgctagttaatactactttcatcactcccaattctatatattcca 33012403  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41686680 - 41686636
Alignment:
Q  1 gagccatttttcaaaataaagtgtcccaaaataaccgagttattt 45  Q
    ||||||||| | ||||||||||||||||||||||| |||| ||||    
T  41686680 gagccatttgtaaaaataaagtgtcccaaaataactgagtcattt 41686636  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 15081417 - 15081472
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||    
T  15081417 tccctttataactctaattaatactactttcataatttccaattcaatatattcca 15081472  T

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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 30064062 - 30064007
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||    
T  30064062 tccctttataactctaattaatattactttcatcactcccaattcaatatattcca 30064007  T

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Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 33109371 - 33109426
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattccatttt 132  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||||||| ||||||    
T  33109371 tttataactctaattaatactactttcatcattctcaattcaatatatttcatttt 33109426  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 117083 - 117128
Alignment:
Q  83 actataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||    
T  117083 actataattaatactactttcatcactctcaattcaatatattcca 117128  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 33018052 - 33018004
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| |||||||||||||||||| || |||||||| |||||||||    
T  33018052 ttataactctaattaatactactttcaccactcccaattcaatatattc 33018004  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 34441890 - 34441938
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| ||||||||||||||||||||| ||  ||||||||||||||    
T  34441890 ttataactttaattaatactactttcatcactcttaatttaatatattc 34441938  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 2310396 - 2310349
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatatt 125  Q
    |||||||  ||||||||||||||||||||| |||||||| ||||||||    
T  2310396 ttataacattaattaatactactttcatcactcccaattcaatatatt 2310349  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 7301193 - 7301138
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||| ||||| |||||||||||||  ||||| |||||||||||    
T  7301193 tccctttataactctaactaatattactttcatcattttcaattcaatatattcca 7301138  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 31265855 - 31265910
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||||||| | || |||||| |||||||||||||| ||| ||||||||    
T  31265855 caccaatacttaacaagagcacttaaaactatttttctctctccttcatttataca 31265910  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 2657977 - 2658030
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttata 187  Q
    ||||||||||||||||||  | ||||||| |||||||||||| |||| ||||||    
T  2657977 caccaatacttaacaaaagtacttaaaatcatttttctctcttattcatttata 2658030  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 4552908 - 4552956
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||  ||||||||| |||||||| || ||||||||||||||||||    
T  4552908 ttataacactaattaatattactttcaccactcccaatttaatatattc 4552956  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 7739546 - 7739494
Alignment:
Q  137 caatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    ||||||||||||||||||||| ||| ||||||||| |||| |||  |||||||    
T  7739546 caatacttaacaaaaacattttaaactatttttctatctctttcacttataca 7739494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 15321333 - 15321285
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||  |||||||||||||||||| ||||| ||||| |||||||||    
T  15321333 ttataacactaattaatactactttcaacattctcaattcaatatattc 15321285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 15371971 - 15371923
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||  |||||||||||||||||| || |||||||| |||||||||    
T  15371971 ttataacactaattaatactactttcaccactcccaattcaatatattc 15371923  T

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Target: scaffold0221 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 8883 - 8936
Alignment:
Q  75 cctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||| ||||||||| |||||||||||||| ||||| |||||||||||    
T  8883 cctttataactctaattaatattactttcatcattctcaattcaatatattcca 8936  T

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Target: scaffold0058 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 14454 - 14505
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| |||||||||||||||||||||||  ||||| |||||||||||    
T  14454 tttataactctaattaatactactttcatcattttcaattcaatatattcca 14505  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 394772 - 394827
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||||||||||||||| || ||||| | |||||||||    
T  394772 tccctttataactctaattaatactactttcatcactctcaattcactatattcca 394827  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 8949 - 8997
Alignment:
Q  141 acttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||||| ||||||||||||||||||||  ||| ||||||||    
T  8949 acttaacaaaaacacttaaaattatttttctctcttcttcatttataca 8997  T

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Target: scaffold0321 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 9662 - 9619
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatt 116  Q
    ||||||||||||| ||||||||||||||||||||| || |||||    
T  9662 tccctttataactctaattaatactactttcatcactctcaatt 9619  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 26320 - 26371
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||| ||||||||| |||||| |||||| |||||| |||||||||||    
T  26320 tttataactctaattaatattacttttatcatttccaattcaatatattcca 26371  T

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Target: scaffold0034 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 98819 - 98874
Alignment:
Q  73 tccctttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||||||||| ||||||||| || |||||||| || ||||| |||||||||||    
T  98819 tccctttataactctaattaatattattttcatcactctcaattcaatatattcca 98874  T

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Target: scaffold0034; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 98901 - 98956
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctctcattcttttataca 189  Q
    |||||||||||| ||| | || ||||||| ||||||||||||||||| ||||||||    
T  98901 caccaatacttatcaagagcacttaaaatcatttttctctctcattcatttataca 98956  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 26611 - 26662
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattcca 128  Q
    ||||||| | ||||||||||||||||||||| || ||||| |||||||||||    
T  26611 tttataattctaattaatactactttcatcactcgcaattcaatatattcca 26662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 5816 - 5865
Alignment:
Q  77 tttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    ||||||||| |||||||||||||||||| || || ||||| |||||||||    
T  5816 tttataactttaattaatactactttcaccactctcaattcaatatattc 5865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 352492 - 352451
Alignment:
Q  134 caccaatacttaacaaaaacatttaaaattatttttctctct 175  Q
    ||||||||||||||||| ||| | ||||||||||||||||||    
T  352492 caccaatacttaacaaagacactcaaaattatttttctctct 352451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 12544 - 12496
Alignment:
Q  78 ttataactataattaatactactttcatcattcccaatttaatatattc 126  Q
    |||||||| |||||||||||||||||| |||||  |||| |||||||||    
T  12544 ttataactctaattaatactactttcaccattcttaattcaatatattc 12496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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