View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12853_low_4 (Length: 338)
Name: NF12853_low_4
Description: NF12853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12853_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 23105443 - 23105664
Alignment:
| Q |
13 |
gttcactggttaagtcaaacaatatttcttcattatgtctaaacctttcattttctttgtcactgtaatgtttttactattataaattttctcacatctt |
112 |
Q |
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| T |
23105443 |
gttcactagttaagtcaaacaatatttcttcattatgtctaaacctttcattttctttgtcactgtaatgtttttactattataaattttctcacatctt |
23105542 |
T |
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| Q |
113 |
tgatcttttaatttccgtgatatgcttacaagagtgttaaatatattataaaattggtgttatatttggttgtttgtgaatagcatggagatatttaatg |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23105543 |
tgatcttttaatttccgtgatatgcttacaagagtgttaaatatattataaaattggtgttatatttggttgtttgtgaatagcatggagatatttaatg |
23105642 |
T |
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| Q |
213 |
ataaattttacttatatcatct |
234 |
Q |
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|||||||||||||||||||||| |
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| T |
23105643 |
ataaattttacttatatcatct |
23105664 |
T |
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