View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12858_low_9 (Length: 245)

Name: NF12858_low_9
Description: NF12858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12858_low_9
NF12858_low_9
[»] chr7 (17 HSPs)
chr7 (18-241)||(36464076-36464299)
chr7 (154-241)||(3935052-3935139)
chr7 (155-241)||(3932813-3932899)
chr7 (153-241)||(8731174-8731262)
chr7 (155-241)||(18395411-18395497)
chr7 (155-241)||(42678571-42678657)
chr7 (154-241)||(8414489-8414576)
chr7 (155-241)||(16496953-16497039)
chr7 (155-241)||(19789185-19789272)
chr7 (155-241)||(16535135-16535221)
chr7 (155-241)||(16630441-16630527)
chr7 (157-241)||(19786879-19786964)
chr7 (155-241)||(8733495-8733582)
chr7 (152-241)||(21769066-21769155)
chr7 (155-241)||(3052303-3052387)
chr7 (155-209)||(42680808-42680862)
chr7 (157-225)||(19093846-19093912)
[»] chr3 (2 HSPs)
chr3 (154-241)||(4533231-4533318)
chr3 (155-241)||(4530934-4531020)
[»] chr5 (9 HSPs)
chr5 (155-241)||(11852175-11852261)
chr5 (154-241)||(11849916-11850003)
chr5 (155-241)||(23164254-23164340)
chr5 (154-241)||(22601000-22601088)
chr5 (155-241)||(37215551-37215638)
chr5 (155-241)||(1779222-1779303)
chr5 (155-233)||(21743719-21743797)
chr5 (155-226)||(37207998-37208070)
chr5 (155-216)||(15469197-15469258)
[»] chr4 (9 HSPs)
chr4 (155-241)||(13774250-13774336)
chr4 (155-241)||(45162278-45162364)
chr4 (154-241)||(42468438-42468525)
chr4 (155-241)||(42470768-42470854)
chr4 (155-241)||(50855771-50855857)
chr4 (158-241)||(13776546-13776630)
chr4 (155-241)||(19429076-19429163)
chr4 (157-241)||(45167170-45167254)
chr4 (155-216)||(8739501-8739562)
[»] chr2 (10 HSPs)
chr2 (155-241)||(42275556-42275642)
chr2 (155-241)||(42277782-42277868)
chr2 (155-241)||(5164151-5164237)
chr2 (161-241)||(8995076-8995156)
chr2 (155-241)||(31486982-31487069)
chr2 (153-241)||(31489266-31489355)
chr2 (161-241)||(15730013-15730093)
chr2 (155-217)||(39816089-39816151)
chr2 (154-216)||(23860126-23860188)
chr2 (163-216)||(34576612-34576665)
[»] chr8 (6 HSPs)
chr8 (153-241)||(24519151-24519239)
chr8 (155-241)||(4877090-4877176)
chr8 (155-241)||(4879418-4879504)
chr8 (155-241)||(36379465-36379552)
chr8 (155-241)||(21268120-21268207)
chr8 (154-241)||(36377180-36377267)
[»] chr1 (9 HSPs)
chr1 (154-241)||(10911449-10911536)
chr1 (155-241)||(29833076-29833162)
chr1 (155-241)||(29833960-29834046)
chr1 (155-241)||(10909205-10909292)
chr1 (155-241)||(8933549-8933635)
chr1 (155-241)||(13011795-13011881)
chr1 (155-241)||(734579-734663)
chr1 (155-234)||(2403835-2403915)
chr1 (155-234)||(2409957-2410037)
[»] scaffold0599 (1 HSPs)
scaffold0599 (155-241)||(1715-1801)
[»] scaffold0008 (1 HSPs)
scaffold0008 (155-241)||(88445-88531)
[»] scaffold1361 (1 HSPs)
scaffold1361 (155-241)||(53-140)
[»] scaffold0098 (1 HSPs)
scaffold0098 (155-233)||(3707-3785)
[»] scaffold0050 (2 HSPs)
scaffold0050 (155-216)||(29453-29514)
scaffold0050 (155-216)||(31768-31829)
[»] chr6 (1 HSPs)
chr6 (157-216)||(20642300-20642359)
[»] scaffold0045 (2 HSPs)
scaffold0045 (152-216)||(64082-64144)
scaffold0045 (152-216)||(71414-71476)


Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 36464076 - 36464299
Alignment:
Q  18 aagctatggaagtatggaagtaaatcatgcgaatccaagtcataaaacatcgtatacacgttctgtgtgtctggtttggattccnnnnnnncaagtatca 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||    
T  36464076 aagctatggaagtatggaagtaaatcatgcgaatccaagtcataaaacatcgtatacacgttctgtgtgtctggtttggattccaaaaaaacaagtatca 36464175  T
Q  118 tcctaatgtagcacaaagcatttttcgaggaatcatttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaa 217  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464176 tcctaatgtagcacaaagcatttttcgaggaatcgtttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaa 36464275  T
Q  218 gttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||    
T  36464276 gttatattacttgaatgattcaat 36464299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 3935139 - 3935052
Alignment:
Q  154 ttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3935139 ttggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 3935052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 3932899 - 3932813
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3932899 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 3932813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 8731174 - 8731262
Alignment:
Q  153 tttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8731174 tttggctcagggacaaaaggaaaggtagataaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 8731262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 18395497 - 18395411
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18395497 tggcttagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 18395411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 42678571 - 42678657
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42678571 tggctcagggacaaaaggaaaggtagagaaaataaagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 42678657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 8414489 - 8414576
Alignment:
Q  154 ttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8414489 ttggctcagggacaaaaggaaaggtagagaaaatagaaaaacactctaatattctcaaagaaaagttatattatttgaatgattcaat 8414576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 16496953 - 16497039
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16496953 tggctcagggacaaaagggaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttaaatgattcaat 16497039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 19789272 - 19789185
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaa-gaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  19789272 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaaggaaaagttatattacttgaatcattcaat 19789185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 16535135 - 16535221
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16535135 tggctcggggacaaaagggaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttaaatgattcaat 16535221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 16630527 - 16630441
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16630527 tggctcggggacaaaagggaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttaaatgattcaat 16630441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 19786964 - 19786879
Alignment:
Q  157 gctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaa-gaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  19786964 gctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaaggaaaagttatattacttgaatcattcaat 19786879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 8733495 - 8733582
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaag-ttatattacttgaatgattcaat 241  Q
    |||||||||||||||||  |||||||||||||| ||||||| |||||||||||||||||||||| |||||||| ||||||| ||||||    
T  8733495 tggctcagggacaaaagagaaggtagagaaaatagagaaactctctaatattctcaaagaaaagattatattatttgaatgcttcaat 8733582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 21769066 - 21769155
Alignment:
Q  152 atttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||| |||||||||  |||||||||||||||||||| ||||||| || |||||||||||||||||  |  ||||| ||||||| ||||||    
T  21769066 attttgctcagggatgaaaggaaaggtagagaaaatagagaaactctttaatattctcaaagaaagttgttattatttgaatgtttcaat 21769155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 3052387 - 3052303
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||| |||||||||||||| ||||||||||||  ||||||  |||| ||||||||||||||  |||||||| ||||||| ||||||    
T  3052387 tggctgagggacaaaaggaatggtagagaaaataaagaaac--tctattattctcaaagaaagtttatattatttgaatgcttcaat 3052303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 42680862 - 42680808
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctc 209  Q
    ||||| ||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  42680862 tggctgaggaacaaaatgaaaggtagagaaaatagagaaacactctaatattctc 42680808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 19093846 - 19093912
Alignment:
Q  157 gctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatatt 225  Q
    |||||||| |||||||| |||||||||||||  |||||| ||||||||||||||||||||  |||||||    
T  19093846 gctcagggtcaaaaggagaggtagagaaaat--agaaactctctaatattctcaaagaaagtttatatt 19093912  T

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Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 4533318 - 4533231
Alignment:
Q  154 ttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4533318 ttggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 4533231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 4531020 - 4530934
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4531020 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 4530934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 11852175 - 11852261
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11852175 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 11852261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 11849916 - 11850003
Alignment:
Q  154 ttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11849916 ttggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattatttgaatgattcaat 11850003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 23164254 - 23164340
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23164254 tggctcagggacaaaagggaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 23164340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 22601088 - 22601000
Alignment:
Q  154 ttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaag-ttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||| |||||||| ||||||| ||||||    
T  22601088 ttggctcagggacaaaagggaaggtagagaaaatagagaaactctctaatattctcaaagaaaagattatattatttgaatgcttcaat 22601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 37215638 - 37215551
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaag-ttatattacttgaatgattcaat 241  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||| |||||||| ||||||| ||||||    
T  37215638 tggctcagggacaaaagggaaggtagagaaaatagagaaactctctaatattctcaaagaaaagattatattatttgaatgcttcaat 37215551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 1779222 - 1779303
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||||||||||||||||||     ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1779222 tggctcagggacaaaaggaaa-----agaaaatagaggaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 1779303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 21743797 - 21743719
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaat 233  Q
    |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||||||| ||||||    
T  21743797 tggcccagggacaaaaggaaaggtagagaaaatagagaaactctctaatattctcaaagaaagtttatattatttgaat 21743719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 37208070 - 37207998
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaag-ttatatta 226  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||    
T  37208070 tggctcagggacaaaagggaaggtagagaaaatagagaaactctctaatattctcgaagaaaagattatatta 37207998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 15469258 - 15469197
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaa 216  Q
    ||||||||||||||||||||||||| | ||||| ||||||| ||||||||||||||||||||    
T  15469258 tggctcagggacaaaaggaaaggtaaaaaaaatagagaaactctctaatattctcaaagaaa 15469197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 13774336 - 13774250
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13774336 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 13774250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 45162364 - 45162278
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45162364 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 45162278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 42468438 - 42468525
Alignment:
Q  154 ttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42468438 ttggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgcttcaat 42468525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 42470768 - 42470854
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42470768 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgcttcaat 42470854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 50855771 - 50855857
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  50855771 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcgaggaaaagttatattacttgaatgattcaat 50855857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 13776630 - 13776546
Alignment:
Q  158 ctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaa-gaaaagttatattacttgaatgattcaat 241  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13776630 ctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaacgaaaagttatattacttgaatgattcaat 13776546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 19429076 - 19429163
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagt-tatattacttgaatgattcaat 241  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  19429076 tggctcacggacaaaaggaaaggtagagaaaatagagaaactctctaatattctcaaagaaaagtatatattacttgaatgattcaat 19429163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 45167254 - 45167170
Alignment:
Q  157 gctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||| |||||||||||||| ||  |||||| |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  45167254 gctcatggacaaaaggaaagttaccgaaaatagagaaacactctaatattcttaaaaaaaagttatattatttgaatgattcaat 45167170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 8739562 - 8739501
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaa 216  Q
    ||||||||||| ||||||||||  |||||||||  |||||| ||||||| ||||||| ||||    
T  8739562 tggctcagggataaaaggaaagaaagagaaaataaagaaactctctaatgttctcaaggaaa 8739501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 42275556 - 42275642
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42275556 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 42275642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 42277782 - 42277868
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42277782 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 42277868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 5164151 - 5164237
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5164151 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgcttcaat 5164237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 8995076 - 8995156
Alignment:
Q  161 agggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8995076 agggacaaaaggaaaggtagagaaaatagagaaactctctaatattctcaaagaaaagttatattacttgaatgattcaat 8995156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 31487069 - 31486982
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaa-gaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  31487069 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaaggaaaagttatattacttgaatcattcaat 31486982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 31489355 - 31489266
Alignment:
Q  153 tttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaa-gaaaagttatattacttgaatgattcaat 241  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  31489355 tttggcttagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaaggaaaagttatattacttgaatcattcaat 31489266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 15730093 - 15730013
Alignment:
Q  161 agggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  15730093 agggacaaaaggaaaggtagagaaaatagagaaactctctaatattctcaaataaaagttatattacttgaatgattcaat 15730013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 39816089 - 39816151
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaa 217  Q
    ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  39816089 tggctcacggacaaaaggaaaggtagagaaaatagagaaactctctaatattctcaaagaaaa 39816151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 23860188 - 23860126
Alignment:
Q  154 ttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaa 216  Q
    |||||||||||||||||||||| | | ||||||| ||||||| ||||||||||||||||||||    
T  23860188 ttggctcagggacaaaaggaaaagcatagaaaatagagaaactctctaatattctcaaagaaa 23860126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 34576612 - 34576665
Alignment:
Q  163 ggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaa 216  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  34576612 ggacaaaaggtaaggtagagaaaatagagaaactctctaatattctcaaagaaa 34576665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 24519151 - 24519239
Alignment:
Q  153 tttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24519151 tttggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctctaagaaaagttatattacttgaatgattcaat 24519239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 4877176 - 4877090
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  4877176 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaggaaaagttatattacttgaatcattcaat 4877090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 4879504 - 4879418
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  4879504 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaggaaaagttatattacttgaatcattcaat 4879418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 36379465 - 36379552
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaa-gaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  36379465 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaaggaaaagttatattacttgaatcattcaat 36379552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 21268120 - 21268207
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaa-gaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  21268120 tggctcagggacaaaagaaaaggtagagaaaatagagaaacactctaatattctcaaaggaaaagttatattacttgaatcattcaat 21268207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 36377180 - 36377267
Alignment:
Q  154 ttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaa-gaaaagttatattacttgaatgattcaat 241  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  36377180 ttggctcaaggacaaa-ggaaaggtagagaaaatagagaaacactctaatattctcaaaggaaaagttatattacttgaatcattcaat 36377267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 10911536 - 10911449
Alignment:
Q  154 ttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10911536 ttggctcagggacaaaaggaaaggtagataaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 10911449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 29833076 - 29833162
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29833076 tggctcagggacaaaagggaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 29833162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 29834046 - 29833960
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29834046 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattacttgaaggattcaat 29833960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 10909292 - 10909205
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaa-gaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10909292 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaacgaaaagttatattacttgaatgattcaat 10909205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 8933549 - 8933635
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8933549 tggctcagggacaaaagaaaaggtagagaaaatagagaaacactctaatattttcaaagaaaagttatattacttgaatgattcaat 8933635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 13011881 - 13011795
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13011881 tggctcaggaacaaaaggaaaggtagagaaaatagagaaacactctaatattctcaaagaaaagttatattatttgaatgattcaat 13011795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 155 - 241
Target Start/End: Original strand, 734579 - 734663
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||| |||||||    
T  734579 tggctcagggacaaaaggaaaggtagagaaaatagagaaaca--ctaatattctcaaggaaaagttatattacttgaatcattcaat 734663  T

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Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 2403835 - 2403915
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaa-gttatattacttgaatg 234  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||  |||||||| |||||||    
T  2403835 tggctcagggacaaaaggaaaggtagagaaaatagagaaactctctaatattctcaaagaaaatattatattatttgaatg 2403915  T

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Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 234
Target Start/End: Original strand, 2409957 - 2410037
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaa-gttatattacttgaatg 234  Q
    ||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||  |||||||| |||||||    
T  2409957 tggctcagggacaaaaggaaaggtagagaaaatagagaaactctataatattctcaaagaaaatattatattatttgaatg 2410037  T

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Target: scaffold0599 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 1801 - 1715
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1801 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactctaatatcctcaaagaaaagttatattacttgaatgattcaat 1715  T

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Target: scaffold0008 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 88531 - 88445
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  88531 tggctcagggacaaaaggaaaggtagagaaaatagagaaagactctaatattctcaaagaaaagttatattacttgaatgattcaat 88445  T

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Target: scaffold1361 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold1361
Description:

Target: scaffold1361; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 140 - 53
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaa-gaaaagttatattacttgaatgattcaat 241  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  140 tggctcagggacaaaaggaaaggtagagaaaatagagaaacactttaatattctcaaacgaaaagttatattacttgaatgattcaat 53  T

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Target: scaffold0098 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 3707 - 3785
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaaagttatattacttgaat 233  Q
    ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||  |||||||| ||||||    
T  3707 tggctcagggacaaaaggaaaggtagagaaaatagagtaactctctaatattctcaaagaaagtttatattatttgaat 3785  T

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Target: scaffold0050 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 29514 - 29453
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaa 216  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  29514 tggctcagggacaaaaggaaaggtagagaaaatagagaaactctctaatgttctcaaagaaa 29453  T

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Target: scaffold0050; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 31829 - 31768
Alignment:
Q  155 tggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaa 216  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  31829 tggctcaaggacaaaaggaaaggtagagaaaatagagaaactctctaatgttctcaaagaaa 31768  T

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Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 20642359 - 20642300
Alignment:
Q  157 gctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaa 216  Q
    |||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||||||    
T  20642359 gctcagggacaaaatgaaaggtagagaaaatagagaaattctctaatattctcaaagaaa 20642300  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 64144 - 64082
Alignment:
Q  152 atttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaa 216  Q
    |||||| |||| ||||||| |||||||| ||||||| ||||||| ||  ||||||||||||||||    
T  64144 atttggatcagagacaaaatgaaaggtaaagaaaatagagaaaccct--aatattctcaaagaaa 64082  T

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Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 71476 - 71414
Alignment:
Q  152 atttggctcagggacaaaaggaaaggtagagaaaattgagaaacactctaatattctcaaagaaa 216  Q
    |||||| |||| ||||||| |||||||| ||||||| ||||||| ||  ||||||||||||||||    
T  71476 atttggatcagagacaaaatgaaaggtaaagaaaatagagaaaccct--aatattctcaaagaaa 71414  T

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