View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12859_high_23 (Length: 384)
Name: NF12859_high_23
Description: NF12859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12859_high_23 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 316; Significance: 1e-178; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 376
Target Start/End: Complemental strand, 38453277 - 38452902
Alignment:
| Q |
1 |
aggcttactgctcttcatgatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatgg |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
38453277 |
aggcttacttctcttcatgatcatcgtcgttattcctacatcggcggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatgg |
38453178 |
T |
|
| Q |
101 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatct |
200 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
38453177 |
caaagctttccatattcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaagaagatct |
38453078 |
T |
|
| Q |
201 |
tgatcatatgatgttggagtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaag |
300 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
38453077 |
caatcatatgatgttagagtatgatcatatgtgtcacttttcacgaaagcctgcatggttgagggtcttcctcttccctgtccttgttaacaacaacaag |
38452978 |
T |
|
| Q |
301 |
gcatcttttgattctttggcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctc |
376 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38452977 |
gcatcttttgattctttaacttccgtcgactcgctcaattccgttcaagtttctccttttgaagaatattcatctc |
38452902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 376
Target Start/End: Complemental strand, 38182967 - 38182592
Alignment:
| Q |
1 |
aggcttactgctcttcatgatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
38182967 |
aggcttactgctcttcatgatcatcgtcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatgg |
38182868 |
T |
|
| Q |
101 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
38182867 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatct |
38182768 |
T |
|
| Q |
201 |
tgatcatatgatgttggagtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaag |
300 |
Q |
| |
|
||||||||||||| |||||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
38182767 |
caatcatatgatgttcgagtatgatcgtatgtgtcgcttttcacaaaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaag |
38182668 |
T |
|
| Q |
301 |
gcatcttttgattctttggcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctc |
376 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
38182667 |
gcatcttttgattctttggcttccgtcgactcgctcaattccgttcaagtttttccttttgaagaatattcatctc |
38182592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 376
Target Start/End: Original strand, 38188164 - 38188539
Alignment:
| Q |
1 |
aggcttactgctcttcatgatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
38188164 |
aggcttactgctcttcatgatcatcgtcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatgg |
38188263 |
T |
|
| Q |
101 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
38188264 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatct |
38188363 |
T |
|
| Q |
201 |
tgatcatatgatgttggagtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaag |
300 |
Q |
| |
|
||||||||||||| |||||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
38188364 |
caatcatatgatgttcgagtatgatcgtatgtgtcgcttttcacaaaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaag |
38188463 |
T |
|
| Q |
301 |
gcatcttttgattctttggcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctc |
376 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
38188464 |
gcatcttttgattctttggcttccgtcgactcgctcaattccgttcaagtttttccttttgaagaatattcatctc |
38188539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 376
Target Start/End: Complemental strand, 38210193 - 38209818
Alignment:
| Q |
1 |
aggcttactgctcttcatgatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
38210193 |
aggcttactgctcttcatgatcatcgtcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatgg |
38210094 |
T |
|
| Q |
101 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
38210093 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatct |
38209994 |
T |
|
| Q |
201 |
tgatcatatgatgttggagtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaag |
300 |
Q |
| |
|
||||||||||||| |||||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
38209993 |
caatcatatgatgttcgagtatgatcgtatgtgtcgcttttcacaaaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaag |
38209894 |
T |
|
| Q |
301 |
gcatcttttgattctttggcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctc |
376 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
38209893 |
gcatcttttgattctttggcttccgtcgactcgctcaattccgttcaagtttttccttttgaagaatattcatctc |
38209818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 376
Target Start/End: Original strand, 38215389 - 38215764
Alignment:
| Q |
1 |
aggcttactgctcttcatgatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
38215389 |
aggcttactgctcttcatgatcatcgtcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatgg |
38215488 |
T |
|
| Q |
101 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
38215489 |
caaagctttccacgttcatgttttccgatgtttgtttcaagtatcaactccttggtgaagatttggatgctttgatcccagtttataacgaagaagatct |
38215588 |
T |
|
| Q |
201 |
tgatcatatgatgttggagtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaag |
300 |
Q |
| |
|
||||||||||||| |||||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
38215589 |
caatcatatgatgttcgagtatgatcgtatgtgtcgcttttcacaaaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaag |
38215688 |
T |
|
| Q |
301 |
gcatcttttgattctttggcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctc |
376 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
38215689 |
gcatcttttgattctttggcttccgtcgactcgctcaattccgttcaagtttttccttttgaagaatattcatctc |
38215764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 376
Target Start/End: Original strand, 38185422 - 38185797
Alignment:
| Q |
1 |
aggcttactgctcttcatgatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatgg |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
38185422 |
aggcttacttctcttcatgatcatcgtcgttattcctacatcggcggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatgg |
38185521 |
T |
|
| Q |
101 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
38185522 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatct |
38185621 |
T |
|
| Q |
201 |
tgatcatatgatgttggagtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaag |
300 |
Q |
| |
|
||||||||||||| |||||||||| |||||||| ||||| || |||||||||||||||||| |||||||||||||| |||||| |||||||||||||| |
|
|
| T |
38185622 |
caatcatatgatgttcgagtatgatcgtatgtgtcgcttttcacaaaagcctgcatggttgagagtcttcctcttcccggtccctattaacaacaacaag |
38185721 |
T |
|
| Q |
301 |
gcatcttttgattctttggcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctc |
376 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
38185722 |
gcatcttttgattctttggcttccgtcgactcgctcaattccgttcaagtttttccttttgaagaatattcatctc |
38185797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 376
Target Start/End: Complemental strand, 38212935 - 38212560
Alignment:
| Q |
1 |
aggcttactgctcttcatgatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatgg |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
38212935 |
aggcttacttctcttcatgatcatcgtcgttattcctacatcggcggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatgg |
38212836 |
T |
|
| Q |
101 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
38212835 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatct |
38212736 |
T |
|
| Q |
201 |
tgatcatatgatgttggagtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaag |
300 |
Q |
| |
|
||||||||||||| |||||||||| |||||||| ||||| || |||||||||||||||||| |||||||||||||| |||||| |||||||||||||| |
|
|
| T |
38212735 |
caatcatatgatgttcgagtatgatcgtatgtgtcgcttttcacaaaagcctgcatggttgagagtcttcctcttcccggtccctattaacaacaacaag |
38212636 |
T |
|
| Q |
301 |
gcatcttttgattctttggcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctc |
376 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
38212635 |
gcatcttttgattctttggcttccgtcgactcgctcaattccgttcaagtttttccttttgaagaatattcatctc |
38212560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 376
Target Start/End: Original strand, 38169633 - 38170008
Alignment:
| Q |
1 |
aggcttactgctcttcatgatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatgg |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
38169633 |
aggcttactgctcttcatgatcatcttcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatgg |
38169732 |
T |
|
| Q |
101 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatct |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
38169733 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccaatttataacgaagaagatct |
38169832 |
T |
|
| Q |
201 |
tgatcatatgatgttggagtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaag |
300 |
Q |
| |
|
||||||| ||||| |||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
38169833 |
caatcatattatgttcgagtatgatcgtatgtgtcacttttcacgaaagcctgcatggctgagggtcttcctcttcccggtccctattaacaacaacaag |
38169932 |
T |
|
| Q |
301 |
gcatcttttgattctttggcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctc |
376 |
Q |
| |
|
||||||||||||||||||||||||| | | |||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
38169933 |
gcatcttttgattctttggcttccgtcaaatcgctcaatttcgttcgagtttctccttttgaagaatattcatctc |
38170008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 38443218 - 38443540
Alignment:
| Q |
1 |
aggcttactgctcttcatgatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
38443218 |
aggcttactgctcttcatgatcatcgtcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatgg |
38443317 |
T |
|
| Q |
101 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatct |
200 |
Q |
| |
|
||||||||||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| |
|
|
| T |
38443318 |
caaagctttcctcattcatggtttccaatgtttgcttcaagtatcaactccttggtgaagattttgatgctttgatcccagtttataacgaagaagatct |
38443417 |
T |
|
| Q |
201 |
tgatcatatgatgttggagtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaag |
300 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38443418 |
caatcatatgatgttcgagtatgatcgtatgtgtcacttttcacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaag |
38443517 |
T |
|
| Q |
301 |
gcatcttttgattctttggcttc |
323 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
38443518 |
gcatcttttgattctttggcttc |
38443540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 38183313 - 38183479
Alignment:
| Q |
1 |
aggcttactgctcttcatgatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| |
|
|
| T |
38183313 |
aggcttactgctcttcatgatcatcgtcgttattcctacatcggtggagacaataaaatcatcatcgtcgatcgtaatatcaacttctttgacctcatgg |
38183412 |
T |
|
| Q |
101 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcga |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38183413 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcga |
38183479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 38215044 - 38214878
Alignment:
| Q |
1 |
aggcttactgctcttcatgatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| |
|
|
| T |
38215044 |
aggcttactgctcttcatgatcatcgtcgttattcctacatcggtggagacaataaaatcatcatcgtcgatcgtaatatcaacttctttgacctcatgg |
38214945 |
T |
|
| Q |
101 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcga |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38214944 |
caaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcga |
38214878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 203 - 376
Target Start/End: Original strand, 38219953 - 38220126
Alignment:
| Q |
203 |
atcatatgatgttggagtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggc |
302 |
Q |
| |
|
||||||||||||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
38219953 |
atcatatgatgttcgagtatgatcgtatgtgtcgcttttcacgaaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaaggc |
38220052 |
T |
|
| Q |
303 |
atcttttgattctttggcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctc |
376 |
Q |
| |
|
|||||||||||||||||||||| | | |||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
38220053 |
atcttttgattctttggcttccatcaaatcgctcaattccgttcaagtctctccttttgaagaatattcatctc |
38220126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 142 - 324
Target Start/End: Original strand, 38155845 - 38156027
Alignment:
| Q |
142 |
tatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttggagtatgatcatatgtgtcactttt |
241 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| | |||| | | ||| ||||| |
|
|
| T |
38155845 |
tatcaactccttggtgaagatctcgatgctttgattccggtttataacgaagaagatcttgatcatatgatgttcgagaacgatcgtttatgttgctttt |
38155944 |
T |
|
| Q |
242 |
tacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttcc |
324 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
38155945 |
cacgaaagcctgcaaagttgagggtcttcctcttccctctccctattagcaacaacaaggcatcttttaattctttggcttcc |
38156027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 38197471 - 38197370
Alignment:
| Q |
1 |
aggcttactgctcttcatgatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatgg |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
38197471 |
aggcttactgctcttcatgatcatcttcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatgg |
38197372 |
T |
|
| Q |
101 |
ca |
102 |
Q |
| |
|
|| |
|
|
| T |
38197371 |
ca |
38197370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 235
Target Start/End: Original strand, 28340981 - 28341142
Alignment:
| Q |
74 |
gtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgcttt |
173 |
Q |
| |
|
|||||||||| |||||||||||| | | ||||||||| | ||||||| | |||| |||||||||||| || |||| |||||||||| | ||| ||| |
|
|
| T |
28340981 |
gtaatatcaaattctccgacctcgttgaaaagctttcttcaaccatgtttgctgatgcttgcttcaagtaccagctccctggtgaagatcttaatgattt |
28341080 |
T |
|
| Q |
174 |
gatcccggtttataacgaaaaagatcttgatcatatgatgttggagtatgatcatatgtgtc |
235 |
Q |
| |
|
|||| | ||| | ||||| | ||||| || |||||||| | |||||||||| |||||||| |
|
|
| T |
28341081 |
gatctccgttcacaacgatgatgatctcgaaaatatgatggtcgagtatgatcgtatgtgtc |
28341142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 28399676 - 28399575
Alignment:
| Q |
131 |
tttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttggagtatgatcatat |
230 |
Q |
| |
|
||||||||||||||||||| | |||| ||||| ||||| |||||||||| || | ||| | ||||| | ||| |||||||||| |||||||| |||| |
|
|
| T |
28399676 |
tttgcttcaagtatcaacttcctggtcaagatctcgatactttgatcccagtcttaaaccaggaagatttggatgatatgatgttcaagtatgattatat |
28399577 |
T |
|
| Q |
231 |
gt |
232 |
Q |
| |
|
|| |
|
|
| T |
28399576 |
gt |
28399575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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