View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12859_high_24 (Length: 378)

Name: NF12859_high_24
Description: NF12859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12859_high_24
NF12859_high_24
[»] chr5 (4 HSPs)
chr5 (10-361)||(9038295-9038661)
chr5 (94-147)||(33362568-33362621)
chr5 (94-139)||(30916118-30916163)
chr5 (132-169)||(11907199-11907236)
[»] scaffold0041 (2 HSPs)
scaffold0041 (98-172)||(605-679)
scaffold0041 (95-173)||(1125-1203)
[»] chr2 (1 HSPs)
chr2 (98-173)||(20921547-20921622)
[»] scaffold1337 (1 HSPs)
scaffold1337 (93-146)||(296-349)
[»] chr3 (5 HSPs)
chr3 (105-172)||(50719693-50719761)
chr3 (105-172)||(50793087-50793155)
chr3 (132-167)||(2088885-2088920)
chr3 (93-172)||(8895194-8895273)
chr3 (98-140)||(48338121-48338163)
[»] chr8 (2 HSPs)
chr8 (94-169)||(11081032-11081107)
chr8 (108-169)||(42307537-42307598)
[»] chr4 (8 HSPs)
chr4 (33-76)||(20944427-20944470)
chr4 (106-169)||(49923777-49923840)
chr4 (94-166)||(37642541-37642613)
chr4 (98-169)||(54372787-54372858)
chr4 (98-169)||(54373956-54374027)
chr4 (132-169)||(11482837-11482874)
chr4 (97-156)||(17521867-17521927)
chr4 (132-168)||(47244028-47244064)
[»] chr6 (2 HSPs)
chr6 (126-171)||(24318096-24318141)
chr6 (226-270)||(561058-561102)
[»] chr1 (5 HSPs)
chr1 (104-169)||(49619829-49619894)
chr1 (98-169)||(49618472-49618543)
chr1 (104-169)||(38451593-38451658)
chr1 (132-168)||(30743129-30743165)
chr1 (105-169)||(52439296-52439360)
[»] scaffold0009 (1 HSPs)
scaffold0009 (132-169)||(205590-205627)
[»] chr7 (1 HSPs)
chr7 (132-169)||(47537078-47537115)
[»] scaffold0065 (1 HSPs)
scaffold0065 (105-169)||(36757-36821)


Alignment Details
Target: chr5 (Bit Score: 243; Significance: 1e-134; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 10 - 361
Target Start/End: Complemental strand, 9038661 - 9038295
Alignment:
Q  10 agatgaagatgtagatgtagatgattaggtgtcggtgatacacggttagatctaataggtctcattttttaaaaggttagatctaatgaaatatgaccaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  9038661 agatgaagatgtagatgtagatgattaggtgtcggtgatacacggttagatctaataggtctcattttttaagaggttagatctaatgaaataggaccaa 9038562  T
Q  110 attgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggacc--------------aatttgnnnnnnngactaaatgtgtaat 195  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||              ||||         || ||||||||||||    
T  9038561 attgaattatggaaacaagataaaagactaaattgaaatgtttaataattaagggaccaatttaaaaaaaagaattaagttaaaagattaaatgtgtaat 9038462  T
Q  196 taagcttt-atatttttatagtttaaagacaaaattgaagagaataatactttagaaactaaattgatggtttatttcattaattttatatttaacggca 294  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9038461 taagcttttatatttttatagtttaaggacaaaattgaagagaataatactttagaaactaaattgatggtttatttcattaattttatatttaacggca 9038362  T
Q  295 tacataatgggtttttaaataataaaaggcatacataatgggtcatgtaactattgggaagagtagc 361  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||    
T  9038361 tacataatgggtttttaaataataaaaggcacacacaatgggtcatgtaactattaggaagagtagc 9038295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 33362568 - 33362621
Alignment:
Q  94 aatgaaatatgaccaaattgaattatggaaacaagataaaggaccaaattgaaa 147  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  33362568 aatgaaataggaccaaattgaatgatggaaagaagataaaggaccaatttgaaa 33362621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 30916118 - 30916163
Alignment:
Q  94 aatgaaatatgaccaaattgaattatggaaacaagataaaggacca 139  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||||    
T  30916118 aatgaaatatgaccaaattgaatgatggaaagaagataaaagacca 30916163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 11907199 - 11907236
Alignment:
Q  132 aaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  11907199 aaggaccaaattgaaacatttaatagttaagggaccaa 11907236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 679 - 605
Alignment:
Q  98 aaatatgaccaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaattt 172  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||||||||  |||||| ||||||||||||||||    
T  679 aaataggaccaaattgaatgatggaaacaatataaaggaccaaattgaaacgtttaatgattaagggaccaattt 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 1125 - 1203
Alignment:
Q  95 atgaaatatgaccaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaatttg 173  Q
    |||||||| ||||||||||||| ||| ||| |||||||||| ||||||||||| ||||||   ||||||||||||||||    
T  1125 atgaaataggaccaaattgaatgatgaaaataagataaagggccaaattgaaacatttaacggttaagggaccaatttg 1203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 20921622 - 20921547
Alignment:
Q  98 aaatatgaccaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaatttg 173  Q
    ||||| ||||||||||||| ||||||| ||||| ||||||||| ||||||  ||||||| ||| ||||||||||||    
T  20921622 aaataggaccaaattgaatgatggaaagaagatcaaggaccaatttgaaacgtttaatatttaggggaccaatttg 20921547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1337 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1337
Description:

Target: scaffold1337; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 349 - 296
Alignment:
Q  93 taatgaaatatgaccaaattgaattatggaaacaagataaaggaccaaattgaa 146  Q
    |||||||||| ||||||||||||| |||||||||||| |||||| |||||||||    
T  349 taatgaaataggaccaaattgaatgatggaaacaagaaaaaggatcaaattgaa 296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 50719761 - 50719693
Alignment:
Q  105 accaaattgaattatggaaacaagataaaggaccaaattgaaa-tatttaataattaagggaccaattt 172  Q
    |||||||||||| |||||||||||| |||||||||||||||||   ||||||| |||| ||||||||||    
T  50719761 accaaattgaatgatggaaacaagacaaaggaccaaattgaaacggtttaatagttaatggaccaattt 50719693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 50793087 - 50793155
Alignment:
Q  105 accaaattgaattatggaaacaagataaaggaccaaattgaaa-tatttaataattaagggaccaattt 172  Q
    |||||||||||| |||||||||||| |||||||||||||||||   ||||||| |||| ||||||||||    
T  50793087 accaaattgaatgatggaaacaagacaaaggaccaaattgaaacggtttaatagttaatggaccaattt 50793155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 167
Target Start/End: Complemental strand, 2088920 - 2088885
Alignment:
Q  132 aaggaccaaattgaaatatttaataattaagggacc 167  Q
    |||||||||||||||| |||||||||||||||||||    
T  2088920 aaggaccaaattgaaacatttaataattaagggacc 2088885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 8895273 - 8895194
Alignment:
Q  93 taatgaaatatgaccaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaattt 172  Q
    |||||||||| ||||||||||||| | |||||||| | ||| |||||||||||||  |||| || |||  ||||||||||    
T  8895273 taatgaaataggaccaaattgaatgaaggaaacaataaaaatgaccaaattgaaacgtttagtagttagtggaccaattt 8895194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Original strand, 48338121 - 48338163
Alignment:
Q  98 aaatatgaccaaattgaattatggaaacaagataaaggaccaa 140  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||    
T  48338121 aaataggaccaaattgaatgatggaaagaagataaaggaccaa 48338163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 11081032 - 11081107
Alignment:
Q  94 aatgaaatatgaccaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||| ||| ||  ||||||| |||  |||||||    
T  11081032 aatgaaataggaccaaattgaatgatggaaagaagataaaggaccaatttggaacgtttaatagttagaggaccaa 11081107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 42307598 - 42307537
Alignment:
Q  108 aaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    ||||| ||| ||||||| |||||||| ||| || ||||||||||||||| ||| ||||||||    
T  42307598 aaattaaatgatggaaagaagataaatgactaatttgaaatatttaatagttaggggaccaa 42307537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 20944470 - 20944427
Alignment:
Q  33 attaggtgtcggtgatacacggttagatctaataggtctcattt 76  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||    
T  20944470 attaggtgttggtgatacacggttagatctaatagatctcattt 20944427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 49923777 - 49923840
Alignment:
Q  106 ccaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    ||||||||||| ||| ||| ||||||||||||||| ||||||  ||||||| ||||||||||||    
T  49923777 ccaaattgaatgatgaaaagaagataaaggaccaatttgaaacgtttaatagttaagggaccaa 49923840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 37642541 - 37642613
Alignment:
Q  94 aatgaaatatgaccaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggac 166  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||| |  ||||||  ||||||| ||| |||||    
T  37642541 aatgaaataggaccaaattgaatgatggaaagaagataaaggactattttgaaacgtttaatagttaggggac 37642613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 54372858 - 54372787
Alignment:
Q  98 aaatatgaccaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||| ||| ||  ||||||| |||  |||||||    
T  54372858 aaataggaccaaattgaatgatggaaagaagataaaggaccaatttggaacgtttaatagttagaggaccaa 54372787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 54373956 - 54374027
Alignment:
Q  98 aaatatgaccaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||| ||  ||  ||||||| ||| ||||||||    
T  54373956 aaataggaccaaattgaatgatggaaagaagataaaggaccaatttagaacgtttaatagttaggggaccaa 54374027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 11482874 - 11482837
Alignment:
Q  132 aaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  11482874 aaggaccaaattgaaacatttaatagttaagggaccaa 11482837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 17521927 - 17521867
Alignment:
Q  97 gaaatatgaccaaattgaattatggaaaca-agataaaggaccaaattgaaatatttaata 156  Q
    |||||| ||||||||||| | ||||||||| | |||||||||||| |||||| ||||||||    
T  17521927 gaaataggaccaaattgactgatggaaacacatataaaggaccaacttgaaaaatttaata 17521867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 47244028 - 47244064
Alignment:
Q  132 aaggaccaaattgaaatatttaataattaagggacca 168  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  47244028 aaggaccaaattgaaatgtttaatagttaagggacca 47244064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 24318096 - 24318141
Alignment:
Q  126 aagataaaggaccaaattgaaatatttaataattaagggaccaatt 171  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||    
T  24318096 aagataaaggaccaaattaaaaagtttaataattaagggaccaatt 24318141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 561102 - 561058
Alignment:
Q  226 aaattgaagagaataatactttagaaactaaattgatggtttatt 270  Q
    |||||||||||| |||||||||||  |||| ||||||||||||||    
T  561102 aaattgaagagagtaatactttagggactacattgatggtttatt 561058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 49619829 - 49619894
Alignment:
Q  104 gaccaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    ||||||||||||| ||||||| ||||||||||||||| ||| ||  ||||||| ||| ||||||||    
T  49619829 gaccaaattgaatgatggaaagaagataaaggaccaatttggaacgtttaatagttaggggaccaa 49619894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 49618543 - 49618472
Alignment:
Q  98 aaatatgaccaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    ||||||||||||||||||| ||||||| ||||||||  ||||| || |||  ||||||| ||| ||||||||    
T  49618543 aaatatgaccaaattgaatgatggaaagaagataaaacaccaatttaaaacgtttaatagttaggggaccaa 49618472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 38451658 - 38451593
Alignment:
Q  104 gaccaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    ||||||||||||| ||||||| ||||||||| ||||| ||| ||  ||||||| ||| ||||||||    
T  38451658 gaccaaattgaatgatggaaagaagataaagtaccaatttggaacgtttaatagttaggggaccaa 38451593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 30743165 - 30743129
Alignment:
Q  132 aaggaccaaattgaaatatttaataattaagggacca 168  Q
    |||||||||||||||| |||||||| |||||||||||    
T  30743165 aaggaccaaattgaaacatttaatagttaagggacca 30743129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 52439296 - 52439360
Alignment:
Q  105 accaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    |||||||||||| ||||||| ||||||||||| ||| ||||||  ||||||| |||  |||||||    
T  52439296 accaaattgaatgatggaaagaagataaaggatcaatttgaaacgtttaatagttagaggaccaa 52439360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 205590 - 205627
Alignment:
Q  132 aaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  205590 aaggaccaaattgaaacgtttaataattaagggaccaa 205627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 47537078 - 47537115
Alignment:
Q  132 aaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  47537078 aaggaccaaattgaaacatttaatagttaagggaccaa 47537115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 36757 - 36821
Alignment:
Q  105 accaaattgaattatggaaacaagataaaggaccaaattgaaatatttaataattaagggaccaa 169  Q
    |||||||||||| ||||||| |||||||| ||| || |||||| ||||||||  |||| ||||||    
T  36757 accaaattgaatgatggaaagaagataaaagactaatttgaaacatttaataggtaagagaccaa 36821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University