View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12859_high_6 (Length: 575)
Name: NF12859_high_6
Description: NF12859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12859_high_6 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 492; Significance: 0; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 492; E-Value: 0
Query Start/End: Original strand, 18 - 558
Target Start/End: Complemental strand, 26192749 - 26192209
Alignment:
| Q |
18 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacattactgggtacaaatatgtcattgatccaaaaggcctcccatctaccaactc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26192749 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacatttctgggtacaaatatgtcattgatccaaaaggcctcccatctaccaactc |
26192650 |
T |
 |
| Q |
118 |
cgtagaagatctcccaattcctaatttggatcatacagaagctttcaagacaggatatttcagtttggatgatcttcacattggaaatgtaatgaccctc |
217 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
26192649 |
cgtagaagatctcccaattcctaacttggatcatacagaagctttcaagacaggatatttcagttttgatgatcttcacgttggaaatgtaatgaccctc |
26192550 |
T |
 |
| Q |
218 |
caatttccggtccaagaagtttctccttacctctcnnnnnnngaggccgactccattcctttctcgatgtcacaactcccaagtattcttcaactctttt |
317 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26192549 |
caatttccggtccaagaagtttctccatacctctcaaaaaaagaggccgactccattcctttctcgatgtcacaactcccaagtattcttcaactctttt |
26192450 |
T |
 |
| Q |
318 |
caatccctgaagcatctcctcaagccaaatccatgagaggagcacttgaagagtgcgaaggggaaaccgttacaggggagacaaaaatctgtgccaattc |
417 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26192449 |
caatccctgaagaatctcctcaagccaaatccatgagaggagcacttgaagagtgcgaaggggaaaccgttacaggggagacaaaaatctgtgccaattc |
26192350 |
T |
 |
| Q |
418 |
tctagagtccatgctcgaatttgttgacacaattattggttcaaacgtcaaatatagtattctaaccacgagcaacccctcacccagaactacccctcta |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26192349 |
tctagagtccatgctcgaatttgttgacacaattattggttcaaacgtcaaatatagtattctaaccacgagcaacccctcacccagaactacccctcta |
26192250 |
T |
 |
| Q |
518 |
caaaagtacaccgttttagaagtatcacatgatattgatgt |
558 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26192249 |
caaaagtacactgttttagaagtatcacatgatattgatgt |
26192209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 109 - 364
Target Start/End: Complemental strand, 26176469 - 26176214
Alignment:
| Q |
109 |
taccaactccgtagaagatctcccaattcctaatttggatcatacagaagctttcaagacaggatatttcagtttggatgatcttcacattggaaatgta |
208 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
26176469 |
taccaactccgcagaagatctcccaattcctaacttggatcatacagaagctttcaagacaggatattttagtttggatgatcttcacgttggaaatgta |
26176370 |
T |
 |
| Q |
209 |
atgaccctccaatttccggtccaagaagtttctccttacctctcnnnnnnngaggccgactccattcctttctcgatgtcacaactcccaagtattcttc |
308 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26176369 |
atgaccttccaatttccggtccaagaagtttctccttacctctcaaaaaaagaggccaactccattcctttctcgatgtcacaactcccaagtattcttc |
26176270 |
T |
 |
| Q |
309 |
aactcttttcaatccctgaagcatctcctcaagccaaatccatgagaggagcactt |
364 |
Q |
| |
|
||||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||| |
|
|
| T |
26176269 |
aactcttttcaatccctaaagaatctcttcaaaccaaatccatgagaggagcactt |
26176214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 128 - 557
Target Start/End: Complemental strand, 26180361 - 26179931
Alignment:
| Q |
128 |
ctcccaat-tcctaatttggatcatacagaagctttcaagacaggatatttcagtttggatgatcttcacattggaaatgtaatgaccctccaatttccg |
226 |
Q |
| |
|
|||||||| |||||| ||||||| |||||||||||||||| ||||| ||||| ||||||||||||| | ||||||||||||||||||| |||||||| |
|
|
| T |
26180361 |
ctcccaatctcctaacttggatcgtacagaagctttcaaggtaggatttttcaatttggatgatctttatgttggaaatgtaatgacccttcaatttccc |
26180262 |
T |
 |
| Q |
227 |
gtccaagaagtttctccttacctctcnnnnnnngaggccgactccattcctttctcgatgtcacaactcccaagtattcttcaactcttttcaatccctg |
326 |
Q |
| |
|
||||||| |||||||||| ||||| ||||| |||||||||||| | | ||||||||||| |||||| ||||||||||||| |||||||||| |
|
|
| T |
26180261 |
gtccaagtggtttctccttttctctcaaaaaaagaggctgactccattcctcttgcaatgtcacaacttccaagtgttcttcaactcttatcaatccctg |
26180162 |
T |
 |
| Q |
327 |
aagcatctcctcaagccaaatccatgagaggagcacttgaagagtgcgaaggggaaaccgttacaggggagacaaaaatctgtgccaattctctagagtc |
426 |
Q |
| |
|
||| ||||||||||| |||||||||| | |||||| |||||| ||| ||||||| |||||||||||||||| | |||||||| ||||||||||| |
|
|
| T |
26180161 |
aagattctcctcaagctaaatccatgataaattcacttggagagtgtgaatcggaaaccattacaggggagacaaagacttgtgccaactctctagagtc |
26180062 |
T |
 |
| Q |
427 |
catgctcgaatttgttgacacaattattggttcaaacgtcaaatatagtattctaaccacgagcaacccctcacccagaactacccctctacaaaagtac |
526 |
Q |
| |
|
|||||||||||||||| |||| || |||||||| | | |||| ||||||||||||||| | ||| |||||||| | | || |||| |||| |||||| |
|
|
| T |
26180061 |
catgctcgaatttgttaacacgatctttggttcagatgccaaaattagtattctaaccaccaacaaaccctcaccgacagctgtccctttacagaagtac |
26179962 |
T |
 |
| Q |
527 |
accgttttagaagtatcacatgatattgatg |
557 |
Q |
| |
|
||| |||| |||||||| ||||||||||||| |
|
|
| T |
26179961 |
accattttggaagtatcccatgatattgatg |
26179931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 360 - 558
Target Start/End: Complemental strand, 26175435 - 26175237
Alignment:
| Q |
360 |
cacttgaagagtgcgaaggggaaaccgttacaggggagacaaaaatctgtgccaattctctagagtccatgctcgaatttgttgacacaattattggttc |
459 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||||||||||| ||| |
|
|
| T |
26175435 |
cacttgaagagtgcgaaggggaaaccgttacaggggagacaaagatctgtgccaattcttaagagcccatgcttgaatttgttgacacaattattagttt |
26175336 |
T |
 |
| Q |
460 |
aaacgtcaaatatagtattctaaccacgagcaacccctcacccagaactacccctctacaaaagtacaccgttttagaagtatcacatgatattgatgt |
558 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
26175335 |
aaacgtcaaatatagtattctgaccaccagcaacccctcaaccagaactatccctctacaaaagtacaccattttagaagtatcacatgatattgatgt |
26175237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 143 - 557
Target Start/End: Complemental strand, 26162548 - 26162134
Alignment:
| Q |
143 |
ttggatcatacagaagctttcaagacaggatatttcagtttggatgatcttcacattggaaatgtaatgaccctccaatttccggtccaagaagtttctc |
242 |
Q |
| |
|
||||||| ||||||||||||||| ||||| ||||| ||||||||||||| | ||||||||||||||||||| |||||||| ||||||| |||| | |
|
|
| T |
26162548 |
ttggatcgcacagaagctttcaaggtaggatttttcaatttggatgatctttatgttggaaatgtaatgacccttcaatttcccatccaagagatttcac |
26162449 |
T |
 |
| Q |
243 |
cttacctctcnnnnnnngaggccgactccattcctttctcgatgtcacaactcccaagtattcttcaactcttttcaatccctgaagcatctcctcaagc |
342 |
Q |
| |
|
|| |||||| ||||| ||||| |||||| || | |||||||||||||||||| || ||||||| || ||||||||||||| ||||||||||| |
|
|
| T |
26162448 |
gtttcctctcaaaaaaagaggctgactcaattcctctcgcaatgtcacaactcccaagtgtttttcaacttttctcaatccctgaagattctcctcaagc |
26162349 |
T |
 |
| Q |
343 |
caaatccatgagaggagcacttgaagagtgcgaaggggaaaccgttacaggggagacaaaaatctgtgccaattctctagagtccatgctcgaatttgtt |
442 |
Q |
| |
|
||||||||| |||| |||||||| |||| |||| ||||||| |||||||||||||||| | |||| || || |||||||||||||||||||||||| |
|
|
| T |
26162348 |
taaatccatgttaggatcacttgaacagtgtgaagcggaaaccattacaggggagacaaagacttgtgtaaactccctagagtccatgctcgaatttgtt |
26162249 |
T |
 |
| Q |
443 |
gacacaattattggttcaaacgtcaaatatagtattctaaccacgagcaacccctcacccagaactacccctctacaaaagtacaccgttttagaagtat |
542 |
Q |
| |
|
||||| || ||||||||| ||| ||| ||| |||||| || || | ||| |||||| | | | | | |||| |||| || |||||| |||| ||||||| |
|
|
| T |
26162248 |
gacacgatcattggttcatacgcgaaacataatattctcactaccaccaaaccctcatcgacagccatccctttacagaattacaccattttggaagtat |
26162149 |
T |
 |
| Q |
543 |
cacatgatattgatg |
557 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
26162148 |
cacatgatattgatg |
26162134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 169 - 459
Target Start/End: Complemental strand, 25929539 - 25929249
Alignment:
| Q |
169 |
aggatatttcagtttggatgatcttcacattggaaatgtaatgaccctccaatttccggtccaagaagtttctccttacctctcnnnnnnngaggccgac |
268 |
Q |
| |
|
||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||| || ||| || ||||| ||| |
|
|
| T |
25929539 |
aggatttttcaatttggatgatcttcatgttggaaatgtaatgaccctccaatttccaatccaagagatttctaatttcctttcgagaaaagaggctgac |
25929440 |
T |
 |
| Q |
269 |
tccattcctttctcgatgtcacaactcccaagtattcttcaactcttttcaatccctgaagcatctcctcaagccaaatccatgagaggagcacttgaag |
368 |
Q |
| |
|
|| |||||| |||| || ||||||||||||||| |||| ||||| |||||||||| |||| ||||||||||| ||||| ||||||| | ||||||| |
|
|
| T |
25929439 |
tcaattcctctctcaatttcacaactcccaagtgttctcgaactcctttcaatccccgaagactctcctcaagcaaaatcaatgagagaaacacttgagc |
25929340 |
T |
 |
| Q |
369 |
agtgcgaaggggaaaccgttacaggggagacaaaaatctgtgccaattctctagagtccatgctcgaatttgttgacacaattattggttc |
459 |
Q |
| |
|
| || ||| ||| |||| ||||||||| | || | ||||||||| ||| ||||||||||||| ||||||||||||| ||| |||||||| |
|
|
| T |
25929339 |
aatgtcaagcagaacccgtcacaggggagtccaagacctgtgccaactctatagagtccatgcttgaatttgttgacaaaataattggttc |
25929249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 146 - 502
Target Start/End: Original strand, 25648361 - 25648717
Alignment:
| Q |
146 |
gatcatacagaagctttcaagacaggatatttcagtttggatgatcttcacattggaaatgtaatgaccctccaatttccggtccaagaagtttctcctt |
245 |
Q |
| |
|
||||| ||||||||||||||| ||| | |||| |||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||| | |
|
|
| T |
25648361 |
gatcacacagaagctttcaagttaggctttttcggtttggatgatcttcatgttggaaatgtaatggccctccaatttccggtccaaaaagttcctcaat |
25648460 |
T |
 |
| Q |
246 |
acctctcnnnnnnngaggccgactccattcctttctcgatgtcacaactcccaagtattcttcaactcttttcaatccctgaagcatctcctcaagccaa |
345 |
Q |
| |
|
||| || ||||| |||| ||||||||||| | ||| ||||| |||| |||| || ||||| ||||||||| ||| ||||| |||||||| |
|
|
| T |
25648461 |
tcctttcgaaaaaggaggctaactcaattcctttctcactctcataactcacaagggttctacatctcttgtcaatccctcaagattctccacaagccaa |
25648560 |
T |
 |
| Q |
346 |
atccatgagaggagcacttgaagagtgcgaaggggaaaccgttacaggggagacaaaaatctgtgccaattctctagagtccatgctcgaatttgttgac |
445 |
Q |
| |
|
||| |||||| | |||||||| | || |||| || | || | ||||||||| | || |||| ||| || ||||||| ||||| ||||||||||| |
|
|
| T |
25648561 |
atctatgagaaaaacacttgaacattgtgaagctgacagagtcagaggggagaccaggatgtgtgtcaactccgtagagtctatgcttaaatttgttgac |
25648660 |
T |
 |
| Q |
446 |
acaattattggttcaaacgtcaaatatagtattctaaccacgagcaacccctcaccc |
502 |
Q |
| |
|
||||| ||||||||| | | ||||||| |||||| || || | |||||| |||||| |
|
|
| T |
25648661 |
acaataattggttcagaagccaaatatgatattctcacaaccaacaacccatcaccc |
25648717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 26176615 - 26176558
Alignment:
| Q |
18 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacattactgggta |
75 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
26176615 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacattaccgggta |
26176558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 26192836 - 26192779
Alignment:
| Q |
18 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacattactgggta |
75 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
26192836 |
cttacataactcaatatggtaaacatgaaaccaagcaactaaattacattaccgggta |
26192779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 26192923 - 26192866
Alignment:
| Q |
18 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacattactgggta |
75 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
26192923 |
cttacataactcaatatggtaaacatgaaaccaagcaacaaaattacattaccgggta |
26192866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 26163018 - 26162957
Alignment:
| Q |
18 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaa-attacattactgggtacaaa |
79 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||| |||||| ||||||||||||| |
|
|
| T |
26163018 |
cttacataactcaatatggtaaacatgaagccaag-aaccaagattacactactgggtacaaa |
26162957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 26162877 - 26162817
Alignment:
| Q |
18 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacattactgggtacaa |
78 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| | ||| |||||| ||| |||||||| |
|
|
| T |
26162877 |
cttacataactcaatatggtaaacatgaagccaagaacccagattacactaccgggtacaa |
26162817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 26176528 - 26176474
Alignment:
| Q |
18 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacattactgg |
72 |
Q |
| |
|
||||||||||| ||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
26176528 |
cttacataacttcatatgataaacatgaaggcaagcaaccaaattacattactgg |
26176474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 26193010 - 26192953
Alignment:
| Q |
18 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacattactgggta |
75 |
Q |
| |
|
||||||||||| |||||||||||||||| |||| ||| |||||||||||||||||| |
|
|
| T |
26193010 |
cttacataactggatatggtaaacatgaagccaattaactaaattacattactgggta |
26192953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 26163300 - 26163240
Alignment:
| Q |
18 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacattactgggtacaa |
78 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| | ||| |||||| ||| |||||||| |
|
|
| T |
26163300 |
cttacataactcaatatggtaaacatgaagacaagaacccagattacactaccgggtacaa |
26163240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 26163441 - 26163380
Alignment:
| Q |
18 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacattactgggtacaaa |
79 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||| | || |||||| ||| ||||||||| |
|
|
| T |
26163441 |
cttacataactcaatatggtaaacatgtagccaaggacgcagattacactaccgggtacaaa |
26163380 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 26163159 - 26163099
Alignment:
| Q |
18 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacattactgggtacaa |
78 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||| | ||| |||||| ||| ||||||| |
|
|
| T |
26163159 |
cttacataactcaatatggtacacatgaagccaagaacccagattacactacccggtacaa |
26163099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 26163723 - 26163663
Alignment:
| Q |
18 |
cttacataactcaatatggtaaacatgaaaccaagcaaccaaattacattactgggtacaa |
78 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||| | ||| ||||| ||| |||||||| |
|
|
| T |
26163723 |
cttacataactcaatatagtaaacatgaagccaagaatccaggttacactaccgggtacaa |
26163663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 175 - 545
Target Start/End: Original strand, 32189237 - 32189610
Alignment:
| Q |
175 |
tttcagtttggatgatcttcacattggaaatgtaatgaccctccaatttccggtccaagaagtttctccttacctctcnnnnnnngaggccgactccatt |
274 |
Q |
| |
|
||||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||| || || ||| || ||| || ||||||||||| || |
|
|
| T |
32189237 |
tttcaatttgaatgatcttcgtgttggaaatgtaatgaccctccaatttccggttcaaaaaattcctcatttcctttcaaaaaaggaggccgactcaatg |
32189336 |
T |
 |
| Q |
275 |
cctttctcgatgtcacaactcccaagtattcttcaactcttttcaatccctgaagcatctcctcaagccaaatccatgagaggagcacttgaagagtgcg |
374 |
Q |
| |
|
||| |||| | ||||||||| |||| |||| || ||||| ||||||||| ||| ||||| |||||||||| |||||| | |||||||| |||| | |
|
|
| T |
32189337 |
cctctctcactctcacaactcacaagagttctacatctcttgtcaatccctcaagattctccacaagccaaatatatgagaaaaacacttgaacagtgtg |
32189436 |
T |
 |
| Q |
375 |
aaggggaaacc---gttacaggggagacaaaaatctgtgccaattctctagagtccatgctcgaatttgttgacacaattattggttcaaacgtcaaata |
471 |
Q |
| |
|
|| | | | || | ||||||||| | || |||| ||| ||| ||||||||||||| ||||| |||| |||||| ||||||||| | | |||||| |
|
|
| T |
32189437 |
aaaaagccatcatagtcaaaggggagaccaggatgtgtgtcaactctttagagtccatgcttgaattcgttggcacaataattggttcagaagccaaata |
32189536 |
T |
 |
| Q |
472 |
tagtattctaaccacgagcaacccctcacccagaactacccctctacaaaagtacaccgttttagaagtatcac |
545 |
Q |
| |
|
| |||||| || || |||||||| ||||||| ||| |||||||| || || |||||| |||| |||||||||| |
|
|
| T |
32189537 |
tgatattctcacaaccagcaacccatcacccacaaccacccctctccagaaatacaccattttggaagtatcac |
32189610 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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