View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12859_low_39 (Length: 277)
Name: NF12859_low_39
Description: NF12859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12859_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 971867 - 972133
Alignment:
| Q |
1 |
ttgctagaggtactcatgcatatcaggcttgattatatttttaacaacttcaatagtatcctgcatgttagtggggtttgaagtagcaaaaatattagtg |
100 |
Q |
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| T |
971867 |
ttgctagaggtactcatgcatatcaggcttgattatatttttaacaacttcaatagtatcctgcatgttagtggggtttgaagtagcaaaaatattagtg |
971966 |
T |
|
| Q |
101 |
aaataatctataaaaatactgttaatatgattgatgtcactccaacatctcccatcaacatcctgaatactcttgatagtatttctcttatttctctgag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
971967 |
aaataatctataaaaatactgttaatatgattgatgtcactccaacatctcccatcaacatcctgaatactcttgatagtatttctcttatttctctgag |
972066 |
T |
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| Q |
201 |
tagcttttttgtgaaagtatttggaatttttatctcatgcttgaagccagtgagattttgctctctg |
267 |
Q |
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|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
972067 |
tagcttttttgtgaaagtatctggaatttttatctcgtgcttgaagccagtgagattttgctctctg |
972133 |
T |
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