View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12861_high_5 (Length: 342)

Name: NF12861_high_5
Description: NF12861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12861_high_5
NF12861_high_5
[»] chr1 (57 HSPs)
chr1 (19-270)||(10495906-10496158)
chr1 (201-270)||(16395028-16395097)
chr1 (198-270)||(21909984-21910056)
chr1 (201-269)||(35367625-35367694)
chr1 (201-270)||(38787409-38787478)
chr1 (193-269)||(37506196-37506272)
chr1 (201-268)||(43500765-43500832)
chr1 (201-270)||(49223967-49224036)
chr1 (201-269)||(12039151-12039219)
chr1 (222-266)||(40144849-40144893)
chr1 (211-270)||(37276529-37276588)
chr1 (203-266)||(42410066-42410129)
chr1 (204-270)||(31042865-31042931)
chr1 (201-266)||(26093466-26093531)
chr1 (201-270)||(32825973-32826041)
chr1 (222-270)||(20209842-20209890)
chr1 (201-269)||(23168974-23169042)
chr1 (201-265)||(30754922-30754986)
chr1 (201-269)||(39864180-39864248)
chr1 (198-257)||(13579599-13579658)
chr1 (201-272)||(32970548-32970619)
chr1 (198-252)||(4659843-4659897)
chr1 (201-266)||(15699194-15699260)
chr1 (215-272)||(6160454-6160511)
chr1 (220-269)||(28749060-28749109)
chr1 (201-266)||(31978633-31978698)
chr1 (204-253)||(34332421-34332470)
chr1 (201-266)||(45331413-45331478)
chr1 (231-267)||(41121836-41121872)
chr1 (225-272)||(31154194-31154241)
chr1 (269-340)||(38261338-38261408)
chr1 (201-266)||(917096-917161)
chr1 (201-266)||(2572540-2572605)
chr1 (201-270)||(12151244-12151313)
chr1 (201-266)||(24991634-24991699)
chr1 (225-270)||(43614465-43614510)
chr1 (222-266)||(4441605-4441649)
chr1 (204-272)||(27687307-27687375)
chr1 (271-303)||(32153799-32153831)
chr1 (205-265)||(41080671-41080731)
chr1 (203-266)||(11449955-11450018)
chr1 (203-266)||(34031510-34031573)
chr1 (222-264)||(11642239-11642281)
chr1 (222-264)||(15444483-15444525)
chr1 (271-305)||(23530542-23530576)
chr1 (201-270)||(6267837-6267906)
chr1 (225-266)||(8896337-8896378)
chr1 (201-266)||(9307699-9307764)
chr1 (269-306)||(12814789-12814826)
chr1 (268-305)||(21631110-21631147)
chr1 (225-266)||(29074956-29074997)
chr1 (201-266)||(33733244-33733308)
chr1 (225-270)||(36701989-36702034)
chr1 (225-270)||(36718093-36718138)
chr1 (266-306)||(943639-943679)
chr1 (198-266)||(44761509-44761577)
chr1 (270-302)||(51810886-51810918)
[»] chr4 (71 HSPs)
chr4 (201-268)||(33790715-33790782)
chr4 (201-272)||(2066855-2066926)
chr4 (185-270)||(6609829-6609912)
chr4 (204-270)||(11907586-11907652)
chr4 (201-270)||(3689630-3689699)
chr4 (205-270)||(52859787-52859852)
chr4 (198-266)||(11288611-11288679)
chr4 (193-267)||(44536172-44536246)
chr4 (201-270)||(17114508-17114577)
chr4 (201-269)||(2942629-2942697)
chr4 (201-269)||(32884870-32884938)
chr4 (201-269)||(43237312-43237380)
chr4 (201-269)||(51625152-51625220)
chr4 (201-270)||(7061648-7061717)
chr4 (221-270)||(21240708-21240757)
chr4 (220-269)||(35380336-35380385)
chr4 (201-270)||(38502466-38502535)
chr4 (201-270)||(47773003-47773072)
chr4 (193-269)||(17237272-17237348)
chr4 (201-269)||(47464349-47464417)
chr4 (227-270)||(32469958-32470001)
chr4 (221-264)||(34321715-34321758)
chr4 (220-266)||(42517641-42517687)
chr4 (220-269)||(6643663-6643712)
chr4 (201-270)||(25233249-25233318)
chr4 (201-266)||(38405086-38405151)
chr4 (201-266)||(49428326-49428391)
chr4 (201-266)||(52247412-52247477)
chr4 (193-269)||(34360724-34360800)
chr4 (201-269)||(40122838-40122906)
chr4 (202-266)||(46396868-46396932)
chr4 (271-306)||(24073128-24073163)
chr4 (201-252)||(25141898-25141949)
chr4 (201-270)||(16821315-16821384)
chr4 (237-270)||(26147635-26147668)
chr4 (201-266)||(30682180-30682245)
chr4 (193-266)||(35311199-35311272)
chr4 (201-270)||(36985854-36985923)
chr4 (201-270)||(49175918-49175987)
chr4 (201-266)||(54506860-54506925)
chr4 (202-266)||(28500876-28500940)
chr4 (224-272)||(31370312-31370360)
chr4 (201-253)||(50263916-50263968)
chr4 (271-306)||(375424-375459)
chr4 (269-304)||(625970-626005)
chr4 (201-252)||(3669965-3670016)
chr4 (271-306)||(6083284-6083319)
chr4 (271-306)||(26866865-26866900)
chr4 (268-340)||(55563095-55563167)
chr4 (220-266)||(5618614-5618660)
chr4 (268-302)||(6629478-6629512)
chr4 (220-266)||(8175583-8175629)
chr4 (268-306)||(25708680-25708718)
chr4 (271-305)||(37776740-37776774)
chr4 (220-265)||(39157876-39157922)
chr4 (271-305)||(39797434-39797468)
chr4 (268-306)||(53564358-53564396)
chr4 (201-266)||(5841411-5841476)
chr4 (268-305)||(6462427-6462464)
chr4 (212-269)||(25869839-25869896)
chr4 (201-270)||(27880226-27880294)
chr4 (269-306)||(36990912-36990949)
chr4 (201-266)||(42616887-42616952)
chr4 (269-306)||(49373695-49373732)
chr4 (230-270)||(2653488-2653528)
chr4 (269-305)||(7698472-7698508)
chr4 (224-260)||(11024897-11024933)
chr4 (220-252)||(30192291-30192323)
chr4 (262-306)||(31937067-31937111)
chr4 (274-306)||(52850456-52850488)
chr4 (269-305)||(54878018-54878054)
[»] chr8 (50 HSPs)
chr8 (193-270)||(13335284-13335361)
chr8 (201-266)||(36967433-36967498)
chr8 (191-266)||(45425635-45425710)
chr8 (203-269)||(29226212-29226278)
chr8 (201-270)||(26626091-26626160)
chr8 (201-266)||(31271093-31271158)
chr8 (201-266)||(10097970-10098035)
chr8 (201-270)||(34393933-34394002)
chr8 (185-266)||(39300904-39300985)
chr8 (201-269)||(1875571-1875639)
chr8 (201-269)||(32678787-32678855)
chr8 (203-266)||(9300094-9300157)
chr8 (201-268)||(21216080-21216147)
chr8 (193-268)||(40996336-40996411)
chr8 (201-266)||(7703135-7703200)
chr8 (201-269)||(1739709-1739777)
chr8 (222-270)||(2767291-2767339)
chr8 (200-268)||(22771813-22771881)
chr8 (201-269)||(39482684-39482752)
chr8 (203-270)||(51181-51247)
chr8 (204-266)||(42972490-42972552)
chr8 (201-266)||(4428331-4428395)
chr8 (225-266)||(5053156-5053197)
chr8 (201-270)||(10179926-10179995)
chr8 (201-270)||(39405830-39405899)
chr8 (201-272)||(17719237-17719308)
chr8 (203-269)||(7172983-7173049)
chr8 (204-270)||(39329087-39329153)
chr8 (269-306)||(19176134-19176171)
chr8 (221-270)||(34948686-34948735)
chr8 (220-268)||(6611767-6611815)
chr8 (222-266)||(31231802-31231846)
chr8 (271-306)||(13568907-13568942)
chr8 (274-305)||(39406562-39406593)
chr8 (222-253)||(39465809-39465840)
chr8 (271-306)||(40784891-40784926)
chr8 (220-266)||(10953406-10953452)
chr8 (220-266)||(10961411-10961457)
chr8 (191-269)||(11976905-11976983)
chr8 (220-266)||(14854932-14854978)
chr8 (271-305)||(36408415-36408449)
chr8 (231-269)||(44761503-44761541)
chr8 (201-266)||(6796024-6796089)
chr8 (203-268)||(31082689-31082754)
chr8 (201-266)||(32476359-32476424)
chr8 (222-270)||(396611-396659)
chr8 (270-306)||(6050557-6050593)
chr8 (270-306)||(18641382-18641418)
chr8 (274-306)||(44580881-44580913)
chr8 (268-304)||(45283796-45283832)
[»] chr7 (53 HSPs)
chr7 (201-270)||(21759969-21760038)
chr7 (201-270)||(38391823-38391892)
chr7 (201-275)||(48608932-48609006)
chr7 (201-270)||(83460-83529)
chr7 (185-263)||(21390377-21390454)
chr7 (201-270)||(40076390-40076459)
chr7 (201-266)||(42935740-42935805)
chr7 (201-270)||(44180280-44180349)
chr7 (201-269)||(46211507-46211575)
chr7 (203-266)||(28202296-28202359)
chr7 (204-270)||(759079-759145)
chr7 (201-267)||(28103811-28103877)
chr7 (203-269)||(33819290-33819356)
chr7 (201-266)||(9786067-9786132)
chr7 (201-266)||(44424214-44424279)
chr7 (201-269)||(5524456-5524524)
chr7 (201-269)||(24516274-24516342)
chr7 (205-269)||(41506054-41506118)
chr7 (203-266)||(3178191-3178254)
chr7 (204-270)||(16560558-16560624)
chr7 (204-270)||(16605038-16605104)
chr7 (201-270)||(22738776-22738845)
chr7 (201-266)||(26974108-26974173)
chr7 (201-266)||(43874002-43874067)
chr7 (201-269)||(11373413-11373481)
chr7 (222-270)||(27921063-27921111)
chr7 (204-266)||(13962038-13962100)
chr7 (201-266)||(16904458-16904523)
chr7 (220-269)||(34100551-34100600)
chr7 (193-269)||(29835391-29835467)
chr7 (201-268)||(2459546-2459613)
chr7 (202-269)||(8592426-8592493)
chr7 (271-306)||(25950831-25950866)
chr7 (268-306)||(44719124-44719162)
chr7 (192-269)||(7463289-7463366)
chr7 (201-266)||(34947579-34947644)
chr7 (220-268)||(7457425-7457473)
chr7 (269-305)||(32759554-32759590)
chr7 (201-272)||(2850866-2850937)
chr7 (271-306)||(12631818-12631853)
chr7 (271-306)||(20951004-20951039)
chr7 (203-266)||(32346039-32346102)
chr7 (201-263)||(31930482-31930544)
chr7 (271-305)||(35569654-35569688)
chr7 (271-305)||(35888312-35888346)
chr7 (204-266)||(49101745-49101807)
chr7 (204-269)||(12631381-12631446)
chr7 (193-266)||(23670565-23670637)
chr7 (220-252)||(19271737-19271769)
chr7 (202-266)||(30866046-30866110)
chr7 (268-304)||(34896122-34896158)
chr7 (270-306)||(41003156-41003192)
chr7 (271-303)||(43441117-43441149)
[»] chr3 (46 HSPs)
chr3 (201-270)||(29023944-29024013)
chr3 (193-269)||(52290962-52291038)
chr3 (201-275)||(17652811-17652885)
chr3 (193-270)||(37497560-37497637)
chr3 (185-270)||(11905890-11905972)
chr3 (201-270)||(10366620-10366689)
chr3 (201-269)||(37312019-37312087)
chr3 (203-270)||(19823079-19823146)
chr3 (200-269)||(43253840-43253909)
chr3 (201-269)||(8679032-8679100)
chr3 (205-272)||(24569082-24569149)
chr3 (201-270)||(34957571-34957640)
chr3 (201-266)||(45710922-45710987)
chr3 (205-266)||(54726557-54726618)
chr3 (203-270)||(53560285-53560352)
chr3 (198-268)||(27471405-27471475)
chr3 (191-269)||(51064786-51064864)
chr3 (201-266)||(1778714-1778779)
chr3 (201-270)||(30190638-30190707)
chr3 (201-265)||(33491061-33491125)
chr3 (191-266)||(31158490-31158564)
chr3 (203-266)||(45811727-45811790)
chr3 (220-266)||(37695663-37695709)
chr3 (224-266)||(43719338-43719380)
chr3 (193-266)||(19609371-19609444)
chr3 (269-306)||(45324089-45324126)
chr3 (198-266)||(19611980-19612048)
chr3 (221-269)||(23004380-23004428)
chr3 (201-269)||(36460394-36460462)
chr3 (202-266)||(37772943-37773007)
chr3 (271-306)||(6784463-6784498)
chr3 (203-270)||(12736552-12736619)
chr3 (203-266)||(28690762-28690825)
chr3 (271-306)||(29454788-29454823)
chr3 (231-270)||(34750564-34750603)
chr3 (271-302)||(41824108-41824139)
chr3 (191-269)||(11632150-11632227)
chr3 (271-305)||(27687986-27688020)
chr3 (271-305)||(33360885-33360919)
chr3 (204-266)||(51837940-51838002)
chr3 (225-270)||(38795412-38795457)
chr3 (268-305)||(45049025-45049062)
chr3 (204-269)||(50035198-50035263)
chr3 (266-306)||(4759353-4759393)
chr3 (201-269)||(14194624-14194692)
chr3 (201-253)||(26467195-26467247)
[»] chr2 (44 HSPs)
chr2 (173-272)||(34120390-34120486)
chr2 (201-270)||(16463757-16463826)
chr2 (204-272)||(36354422-36354490)
chr2 (201-267)||(31448669-31448735)
chr2 (201-269)||(39785657-39785725)
chr2 (203-268)||(25637551-25637615)
chr2 (201-270)||(36794352-36794421)
chr2 (198-266)||(39691562-39691630)
chr2 (198-265)||(26607941-26608008)
chr2 (222-268)||(9458268-9458314)
chr2 (185-262)||(11742489-11742566)
chr2 (201-266)||(15359063-15359128)
chr2 (201-266)||(19937749-19937814)
chr2 (201-270)||(27501514-27501583)
chr2 (193-266)||(32783436-32783509)
chr2 (201-269)||(3323262-3323330)
chr2 (203-270)||(16805949-16806016)
chr2 (203-270)||(16845230-16845297)
chr2 (198-265)||(17695403-17695470)
chr2 (201-266)||(37322500-37322566)
chr2 (174-266)||(45235653-45235742)
chr2 (220-269)||(35313956-35314005)
chr2 (193-269)||(8947020-8947096)
chr2 (201-266)||(14523348-14523413)
chr2 (193-266)||(16377624-16377697)
chr2 (203-272)||(34225656-34225725)
chr2 (191-252)||(39443799-39443860)
chr2 (221-270)||(43699595-43699644)
chr2 (218-266)||(11367151-11367199)
chr2 (269-305)||(30830345-30830381)
chr2 (271-306)||(4408780-4408815)
chr2 (271-306)||(44573884-44573919)
chr2 (271-305)||(9701070-9701104)
chr2 (220-266)||(12520845-12520891)
chr2 (268-306)||(23788966-23789004)
chr2 (271-305)||(29830757-29830791)
chr2 (269-305)||(1748646-1748682)
chr2 (204-268)||(5789627-5789691)
chr2 (270-306)||(8912876-8912912)
chr2 (269-297)||(15571181-15571209)
chr2 (269-305)||(18374707-18374743)
chr2 (220-264)||(23492979-23493023)
chr2 (269-305)||(24345681-24345717)
chr2 (270-306)||(45628881-45628917)
[»] chr6 (26 HSPs)
chr6 (201-268)||(11655923-11655990)
chr6 (201-270)||(29363374-29363443)
chr6 (193-269)||(31894179-31894255)
chr6 (203-270)||(21010245-21010312)
chr6 (201-272)||(32440622-32440693)
chr6 (174-270)||(27448109-27448202)
chr6 (201-272)||(1063580-1063651)
chr6 (201-268)||(7072230-7072297)
chr6 (205-266)||(5302423-5302484)
chr6 (201-266)||(6802003-6802068)
chr6 (201-269)||(1781871-1781939)
chr6 (204-268)||(23142737-23142801)
chr6 (201-272)||(3291745-3291816)
chr6 (204-266)||(6834349-6834411)
chr6 (201-266)||(13087602-13087667)
chr6 (201-268)||(15058187-15058254)
chr6 (220-268)||(13909494-13909542)
chr6 (222-270)||(30716968-30717016)
chr6 (201-252)||(3720218-3720269)
chr6 (271-306)||(5576379-5576414)
chr6 (224-270)||(1955979-1956025)
chr6 (270-306)||(2090657-2090693)
chr6 (220-264)||(2423692-2423736)
chr6 (271-303)||(9299433-9299465)
chr6 (220-264)||(12438780-12438824)
chr6 (270-306)||(13011122-13011158)
[»] scaffold0294 (1 HSPs)
scaffold0294 (201-269)||(17104-17172)
[»] chr5 (40 HSPs)
chr5 (201-272)||(21060696-21060767)
chr5 (195-269)||(2232043-2232117)
chr5 (204-270)||(40899986-40900052)
chr5 (193-270)||(7827894-7827971)
chr5 (201-270)||(9515814-9515883)
chr5 (201-269)||(2588044-2588112)
chr5 (201-269)||(15818456-15818524)
chr5 (201-269)||(40530200-40530268)
chr5 (206-263)||(19930021-19930078)
chr5 (201-266)||(29374414-29374479)
chr5 (193-266)||(843509-843582)
chr5 (201-270)||(6753635-6753703)
chr5 (203-268)||(8698379-8698444)
chr5 (201-266)||(27542867-27542932)
chr5 (201-266)||(31655125-31655190)
chr5 (201-269)||(4818620-4818688)
chr5 (222-269)||(3348122-3348169)
chr5 (203-266)||(8724987-8725050)
chr5 (201-252)||(42922843-42922894)
chr5 (220-270)||(38508182-38508232)
chr5 (201-266)||(29570464-29570529)
chr5 (201-266)||(30512661-30512726)
chr5 (201-266)||(30553001-30553066)
chr5 (226-270)||(41062161-41062205)
chr5 (220-268)||(41496150-41496198)
chr5 (225-272)||(3076656-3076703)
chr5 (271-306)||(5527974-5528009)
chr5 (270-305)||(14570893-14570928)
chr5 (268-306)||(19571941-19571979)
chr5 (268-306)||(23286476-23286514)
chr5 (271-305)||(34889282-34889316)
chr5 (204-266)||(37184058-37184120)
chr5 (220-269)||(6615875-6615924)
chr5 (227-272)||(11796169-11796214)
chr5 (225-270)||(18890555-18890600)
chr5 (269-306)||(43060413-43060450)
chr5 (262-306)||(1265940-1265984)
chr5 (221-253)||(5731861-5731893)
chr5 (220-268)||(41478897-41478945)
chr5 (220-268)||(41492372-41492420)
[»] scaffold0003 (2 HSPs)
scaffold0003 (174-270)||(39156-39249)
scaffold0003 (201-269)||(252507-252575)
[»] scaffold0110 (1 HSPs)
scaffold0110 (201-270)||(1772-1841)
[»] scaffold0182 (1 HSPs)
scaffold0182 (204-270)||(20334-20400)
[»] scaffold1391 (1 HSPs)
scaffold1391 (204-266)||(1798-1860)
[»] scaffold0095 (3 HSPs)
scaffold0095 (201-270)||(50272-50341)
scaffold0095 (222-253)||(22661-22692)
scaffold0095 (274-305)||(45516-45547)
[»] scaffold0330 (1 HSPs)
scaffold0330 (198-266)||(5462-5530)
[»] scaffold0012 (1 HSPs)
scaffold0012 (202-266)||(105756-105820)
[»] scaffold0328 (1 HSPs)
scaffold0328 (201-272)||(7959-8030)
[»] scaffold0302 (1 HSPs)
scaffold0302 (220-266)||(16170-16216)
[»] scaffold0470 (1 HSPs)
scaffold0470 (220-268)||(1055-1103)
[»] scaffold0883 (1 HSPs)
scaffold0883 (274-305)||(1723-1754)
[»] scaffold0674 (1 HSPs)
scaffold0674 (268-306)||(5148-5186)
[»] scaffold0549 (1 HSPs)
scaffold0549 (268-306)||(10184-10222)
[»] scaffold0240 (1 HSPs)
scaffold0240 (268-306)||(18494-18532)
[»] scaffold0161 (1 HSPs)
scaffold0161 (268-306)||(3435-3473)
[»] scaffold0583 (1 HSPs)
scaffold0583 (201-266)||(2097-2162)
[»] scaffold0464 (1 HSPs)
scaffold0464 (201-270)||(6263-6332)
[»] scaffold0018 (1 HSPs)
scaffold0018 (201-266)||(136015-136080)
[»] scaffold0011 (1 HSPs)
scaffold0011 (225-270)||(14172-14217)
[»] scaffold0159 (1 HSPs)
scaffold0159 (204-268)||(34000-34064)
[»] scaffold0107 (1 HSPs)
scaffold0107 (270-306)||(48653-48689)
[»] scaffold0039 (1 HSPs)
scaffold0039 (270-306)||(104063-104099)


Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 270
Target Start/End: Complemental strand, 10496158 - 10495906
Alignment:
Q  19 tccttctgaggattgtatttaatttttagtactttttaacctgcaaatgtctcttaaaaacaaattgggacatgtattgtggatataaaaaatcaaacat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10496158 tccttctgaggattgtatttaatttttagtactttttaacctgcaaatgtctcttaaaaacaaattgggacatgcattgtggatataaaaaatcaaacat 10496059  T
Q  119 tttacagttatttgatttcaatttatcaccgaaagtgtatctcaatgctaactagtact-cctctgcctctaaataatactaatcgtttaaggtttatgt 217  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||  ||||||||||||||||| |||||||||||||||    
T  10496058 tttacagttatttgatttcaatttattaccgaaagtgtatctcaatgctaactagtactccctctatctctaaataatactaattgtttaaggtttatgt 10495959  T
Q  218 aagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  10495958 aagattattaaaaaaattattaattttgttgattttgatggtaaaattagtat 10495906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 16395028 - 16395097
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16395028 tcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatagtaaaattagtat 16395097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 21909984 - 21910056
Alignment:
Q  198 taatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21909984 taatcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 21910056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 35367625 - 35367694
Alignment:
Q  201 tcgtttaag-gtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35367625 tcgtttaagcgtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 35367694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 38787478 - 38787409
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||| | |||||||||| |||||||| |||||||||||||||||||||||| ||||||    
T  38787478 tcgtttaaggtttatgcacgattattaaggaaatgattgattgtgttgattttgatggtaaaactagtat 38787409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 37506272 - 37506196
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||| ||||||||||||||| ||| | | |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  37506272 aataataatcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatgataaaattagta 37506196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 43500765 - 43500832
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    |||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||||| |||||||    
T  43500765 tcgtttaaggtttatgcacgattattaaggaaattattaattgtgttgattttgatggtataattagt 43500832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 49223967 - 49224036
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||| || ||| | | ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49223967 tcgtttaagattgatgcacggttactaagaaaatgattaattgtgttgattttgatggtaaaattagtat 49224036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 12039219 - 12039151
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||||||| || | |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  12039219 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 12039151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 40144849 - 40144893
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  40144849 ttattaagaaaatgattaattgtgttgattttgatggtaaaatta 40144893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 37276588 - 37276529
Alignment:
Q  211 tttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||| | |||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  37276588 tttatgcacgattattaaggaaatgattaactgtgttgattttgatggtaaaattagtat 37276529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 42410129 - 42410066
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||| ||| | | ||||||| |||||||||||||||||||||||||||||||||||||    
T  42410129 gtttaaggttgatgcacggttattaaaaaaatgattaattgtgttgattttgatggtaaaatta 42410066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 31042931 - 31042865
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||| || | |||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  31042931 tttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtat 31042865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 26093531 - 26093466
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||| ||| || | |||||||||||||||||||||||||||||||||  ||||||||||||    
T  26093531 tcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaatta 26093466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 32825973 - 32826041
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||| ||| | | |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  32825973 tcgtttaaggttgatgcacggttattaaggaaatgattaat-gtgttgattttgatggtaaaattagtat 32826041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 20209842 - 20209890
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  20209842 ttattaagaaaatgattaattatgttgattttgatagtaaaattagtat 20209890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 23168974 - 23169042
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||| |||| || | ||||||||||||||| |||||||||||||||||  |||||||||||||||    
T  23168974 tcgtttaaagtttgtgcacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagta 23169042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 30754922 - 30754986
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatt 265  Q
    ||||||||| |||||| | |||||||||| ||||||||||||||||||||||| | |||||||||    
T  30754922 tcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgattttaagggtaaaatt 30754986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 39864248 - 39864180
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||| |||| || | |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  39864248 tcgtttaaagtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 39864180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 13579599 - 13579658
Alignment:
Q  198 taatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatg 257  Q
    ||||| ||||||||||||| | |||||||||  |||||||||||||||||||||||||||    
T  13579599 taatcatttaaggtttatgcatgattattaaagaaatgattaattgtgttgattttgatg 13579658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 32970548 - 32970619
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    ||||||||||||  | || |||||||||||||||||||||||||||||||||  ||| |||||||| |||||    
T  32970548 tcgtttaaggttcgtatacgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatatta 32970619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 252
Target Start/End: Complemental strand, 4659897 - 4659843
Alignment:
Q  198 taatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattt 252  Q
    |||||||||| |||||||| | || ||||||||||||||||||||||||||||||    
T  4659897 taatcgtttagggtttatgcatgaatattaagaaaatgattaattgtgttgattt 4659843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 15699260 - 15699194
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaa-tgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| ||| |   |||||||||||| |||||||||||||||||||||||||||||||||    
T  15699260 tcgtttaaggttgatgcacagttattaagaaaaatgattaattgtgttgattttgatggtaaaatta 15699194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 6160454 - 6160511
Alignment:
Q  215 tgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    |||| |||| ||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  6160454 tgtacgatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtatta 6160511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 28749109 - 28749060
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  28749109 gattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 28749060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 31978633 - 31978698
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||| |||| || | |||||||||||||| ||||||||||||||||||  ||||||||||||    
T  31978633 tcgtttaaagtttgtgcacgattattaagaaaaagattaattgtgttgatttcaatggtaaaatta 31978698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 34332470 - 34332421
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgatttt 253  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  34332470 tttaaggtttctgtaagatttttaagaaaataattaattgtgttgatttt 34332421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 45331478 - 45331413
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| | | | | ||||||||||||| ||||||| |||||||||||||||||||||||    
T  45331478 tcgtttaaggttgacgcacggttattaagaaaataattaattatgttgattttgatggtaaaatta 45331413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 41121836 - 41121872
Alignment:
Q  231 aaatgattaattgtgttgattttgatggtaaaattag 267  Q
    |||||||||||||||||||||||||||||||||||||    
T  41121836 aaatgattaattgtgttgattttgatggtaaaattag 41121872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 272
Target Start/End: Complemental strand, 31154241 - 31154194
Alignment:
Q  225 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    |||| |||||||||||||||||||||||| ||| ||||||||||||||    
T  31154241 ttaataaaatgattaattgtgttgattttaatgataaaattagtatta 31154194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 340
Target Start/End: Original strand, 38261338 - 38261408
Alignment:
Q  269 attactacctccgtccttaattataagacctttttgagnnnnnnntttcttccctttttataagactccttt 340  Q
    |||||||||||||||||||||||||||||| |||||||       |||  ||||||||||||||||||||||    
T  38261338 attactacctccgtccttaattataagacccttttgagaatttttttt-gtccctttttataagactccttt 38261408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 917161 - 917096
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| || | |||||||||  |||||||||||| |||||||||  ||||||||||||    
T  917161 tcgtttaaggtttgtgcacgattattaaataaatgattaattatgttgatttaaatggtaaaatta 917096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 2572605 - 2572540
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||| |||| |||| ||||||||| | ||||||||||||| |||||||  ||||||||||||    
T  2572605 tcgtttaaagtttgtgtacgattattaaaataatgattaattgtattgatttcaatggtaaaatta 2572540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 12151313 - 12151244
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| |||| |||||||||| | || ||||||| |||||||||  ||| ||||||||||||    
T  12151313 tcgtttaaggtttgtgtatgattattaaggagattattaattatgttgatttcaatgataaaattagtat 12151244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 24991634 - 24991699
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| |  | |||||||||| ||||||||||||||||||||||  | ||||||||||    
T  24991634 tcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaacggtaaaatta 24991699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 43614510 - 43614465
Alignment:
Q  225 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||| |||||||||| |||||||||||| ||||||||||||||||    
T  43614510 ttaaggaaatgattaagtgtgttgattttaatggtaaaattagtat 43614465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 4441605 - 4441649
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||    
T  4441605 ttattaagaaaataattaattgtggtgattttaatggtaaaatta 4441649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 27687375 - 27687307
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    |||||||||| || |  |||||||| |||||||||| ||||||||||||  |||||||||||| |||||    
T  27687375 tttaaggtttgtgcacaattattaaaaaaatgattagttgtgttgatttcaatggtaaaattaatatta 27687307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 303
Target Start/End: Complemental strand, 32153831 - 32153799
Alignment:
Q  271 tactacctccgtccttaattataagaccttttt 303  Q
    |||||||||||||||||||||||||||||||||    
T  32153831 tactacctccgtccttaattataagaccttttt 32153799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 41080731 - 41080671
Alignment:
Q  205 ttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatt 265  Q
    |||||||||||| | || | |||| |||||||||||||||||||||||| || ||||||||    
T  41080731 ttaaggtttatgcatgaattttaaaaaaatgattaattgtgttgattttaatagtaaaatt 41080671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 11450018 - 11449955
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||| || | |||||||||| ||||| |||||| |||||||||  ||||||||||||    
T  11450018 gtttaaggtttgtgcacgattattaaggaaatggttaattatgttgatttcaatggtaaaatta 11449955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 34031510 - 34031573
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||| || | |||||||||| ||||||||| |||||||||||   ||||||||||||    
T  34031510 gtttaaggtttgtgcatgattattaaggaaatgattacttgtgttgattccaatggtaaaatta 34031573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 11642281 - 11642239
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgattttgatggtaaaat 264  Q
    ||||||||||||||||||||  |||||||||| ||||||||||    
T  11642281 ttattaagaaaatgattaatattgttgattttaatggtaaaat 11642239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 15444483 - 15444525
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgattttgatggtaaaat 264  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||    
T  15444483 ttattaaggaaatgattaatagtgttgattttaatggtaaaat 15444525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 305
Target Start/End: Original strand, 23530542 - 23530576
Alignment:
Q  271 tactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||||||||||||||||| ||||||    
T  23530542 tactacctccgtccttaattataagacccttttga 23530576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 6267837 - 6267906
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| || |  ||| ||||  ||||||||||||||||||||||| ||| ||||| ||||||    
T  6267837 tcgtttaaggtttgtgcactatttttaaagaaatgattaattgtgttgattttaatgataaaactagtat 6267906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 8896337 - 8896378
Alignment:
Q  225 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||||| |||||||||||||  ||||||||||||    
T  8896337 ttaagaaaatgattgattgtgttgatttcaatggtaaaatta 8896378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 9307764 - 9307699
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| |  | |||||||||| |||||||||| |||||||||||  ||| ||||||||    
T  9307764 tcgtttaaggtttgtacacgattattaaggaaatgattaactgtgttgatttcaatgataaaatta 9307699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 12814826 - 12814789
Alignment:
Q  269 attactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  12814826 attactacctccgtccataattataagaccattttgag 12814789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 21631147 - 21631110
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttga 305  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  21631147 tattactacctccgtccctaattataagacccttttga 21631110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 29074997 - 29074956
Alignment:
Q  225 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||| |||||||||| ||||||||||||| ||||||||||||    
T  29074997 ttaaaaaaatgattagttgtgttgattttaatggtaaaatta 29074956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 33733244 - 33733308
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||| |||| || | |||||||||| ||||||||| ||||||||||||  ||||||||||||    
T  33733244 tcgtttaaagtttgtgcacgattattaaggaaatgatta-ttgtgttgatttcaatggtaaaatta 33733308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 36702034 - 36701989
Alignment:
Q  225 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||| |||||||||||| |||||||||  ||||||||||||||||    
T  36702034 ttaaggaaatgattaattatgttgatttcaatggtaaaattagtat 36701989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 36718138 - 36718093
Alignment:
Q  225 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||| |||||||||||| |||||||||  ||||||||||||||||    
T  36718138 ttaaggaaatgattaattatgttgatttcaatggtaaaattagtat 36718093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 943679 - 943639
Alignment:
Q  266 agtattactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||| ||||||||| ||||||||||||| |||||||    
T  943679 agtattactccctccgtccctaattataagacccttttgag 943639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 44761509 - 44761577
Alignment:
Q  198 taatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||  |||| |||| ||||| ||| ||||||||||||| |||| ||||| ||| ||||||||    
T  44761509 taatcgtttagagtttgtgtatgattaataaaaaaatgattaattatgttaattttaatgataaaatta 44761577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 302
Target Start/End: Original strand, 51810886 - 51810918
Alignment:
Q  270 ttactacctccgtccttaattataagacctttt 302  Q
    |||||||||||||||||||||||||||| ||||    
T  51810886 ttactacctccgtccttaattataagacatttt 51810918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 33790715 - 33790782
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33790715 tcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 33790782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 2066926 - 2066855
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    |||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  2066926 tcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaagttagtatta 2066855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 6609912 - 6609829
Alignment:
Q  185 ctctaaataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||| |  |||||||| ||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6609912 ctctaaataatagt--tcgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 6609829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 11907586 - 11907652
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11907586 tttaaggttaatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 11907652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 3689699 - 3689630
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||||| | |||||||  |||||||||||||| |||||||||||||||||||||||||    
T  3689699 tcgtttaaggtttatgtacggttattaaagaaatgattaattgtattgattttgatggtaaaattagtat 3689630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 52859787 - 52859852
Alignment:
Q  205 ttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||| ||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  52859787 ttaaggcttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 52859852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 11288611 - 11288679
Alignment:
Q  198 taatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||| |||||||    
T  11288611 taatcgtttaaggtttatgtacgattattaagaaaatgattaattgtattgatttcaatggcaaaatta 11288679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 44536172 - 44536246
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattag 267  Q
    |||| |||| |||||| ||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  44536172 aatattaattgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttaatggtaaaattag 44536246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 17114577 - 17114508
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||| ||| |   |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17114577 tcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 17114508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 2942629 - 2942697
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||||||| | ||||||||||||  |||||||||||||||||||||| |||| |||||||||||    
T  2942629 tcgtttaaggtttgtataagattattaaagaaatgattaattgtgttgatttcgatgataaaattagta 2942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 32884938 - 32884870
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  32884938 tcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtagaattagta 32884870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 43237380 - 43237312
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||| ||||  |||||||||||||||    
T  43237380 tcgtttaaggtttatgcacgattattaaggaaatgattaattgtgtttatttcaatggtaaaattagta 43237312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 51625220 - 51625152
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||| |||| || | |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  51625220 tcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 51625152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 7061648 - 7061717
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| |  | |||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  7061648 tcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtat 7061717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 21240708 - 21240757
Alignment:
Q  221 attattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  21240708 attattaaggaaatgattaactgtgttgattttgatggtaaaattagtat 21240757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 35380336 - 35380385
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  35380336 gattattaagaaaatgattaattatgttgattttaatggtaaaattagta 35380385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 38502466 - 38502535
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||| ||| |   |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  38502466 tcgtttaaggttgatgcatagttattaaggaaataattaattgtgttgattttgatggtaaaattagtat 38502535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 47773003 - 47773072
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||| ||| |   |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  47773003 tcgtttaaggttgatgcacagttattaaggaaataattaattgtgttgattttgatggtaaaattagtat 47773072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 17237272 - 17237348
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||| || |||||||||| || | ||||||||||||||| ||||||||||||||||   |||||||||||||||    
T  17237272 aatactagtcatttaaggtttgtgcatgattattaagaaaataattaattgtgttgattgcaatggtaaaattagta 17237348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 47464349 - 47464417
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||||  | | |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  47464349 tcgtttaaggtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 47464417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 32469958 - 32470001
Alignment:
Q  227 aagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  32469958 aagaaaatgattaattgtgttgattttaatggtaaaattagtat 32470001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 34321715 - 34321758
Alignment:
Q  221 attattaagaaaatgattaattgtgttgattttgatggtaaaat 264  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  34321715 attattaagaaaatgattaattgtgttgattttaatggtaaaat 34321758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 42517641 - 42517687
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||    
T  42517641 gattattaagaaaatgattaattgtgttgatttcaatggtaaaatta 42517687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 6643663 - 6643712
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  6643663 gattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 6643712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 25233318 - 25233249
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||| |||||   |||||||  |||| |||||||||||| ||||||||||||||||||||||    
T  25233318 tcgtttaaggttgatgtacagttattaaagaaataattaattgtgttaattttgatggtaaaattagtat 25233249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 38405086 - 38405151
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| || | |||||||||| |||||||||||| |||||||||  ||||||||||||    
T  38405086 tcgtttaaggtttgtgcacgattattaaggaaatgattaattctgttgatttaaatggtaaaatta 38405151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 49428326 - 49428391
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| || | |||||||||| ||||||||| ||||||||||||  ||||||||||||    
T  49428326 tcgtttaaggtttttgcacgattattaaggaaatgattatttgtgttgatttcaatggtaaaatta 49428391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 52247412 - 52247477
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||| || || | |||||||||||||||||||||||||||| ||||  ||||||||||||    
T  52247412 tcgtttaaggattgtgcacgattattaagaaaatgattaattgtgttaatttcaatggtaaaatta 52247477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 34360800 - 34360724
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||| ||||||||||| |||| || | |||||||||  |||||||||||||| |||||||  |||||||||||||||    
T  34360800 aatattaatcgtttaaagtttgtgcacgattattaaagaaatgattaattgtattgatttcaatggtaaaattagta 34360724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 40122838 - 40122906
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||| ||| || | |||||||||| ||||||||||||| ||||||||| ||| |||||||||||    
T  40122838 tcgtttaagctttgtgcacgattattaaggaaatgattaattgcgttgattttaatgttaaaattagta 40122906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 46396868 - 46396932
Alignment:
Q  202 cgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| || | ||| |||||| ||||||||||||||||||||||  ||||||||||||    
T  46396868 cgtttaaggtttgtgcacgatcattaagtaaatgattaattgtgttgatttcaatggtaaaatta 46396932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 306
Target Start/End: Complemental strand, 24073163 - 24073128
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||||||||||||||||||||||    
T  24073163 tactacctccgtccttaattataagacctttttgag 24073128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 25141898 - 25141949
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattt 252  Q
    ||||||||||||||| || |||| |||||||||||||||| |||||||||||    
T  25141898 tcgtttaaggtttatatacgatttttaagaaaatgattaaatgtgttgattt 25141949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 16821315 - 16821384
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| || | |||||||||   |||||||||||||||||||||  ||| ||||||||||||    
T  16821315 tcgtttaaggtttgtgcacgattattaatgcaatgattaattgtgttgatttcaatgataaaattagtat 16821384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 270
Target Start/End: Original strand, 26147635 - 26147668
Alignment:
Q  237 ttaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||||||||||||||||||||||||    
T  26147635 ttaattgtgttgattttgatggtaaaattagtat 26147668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 30682180 - 30682245
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| || | || |||||| |||||||||||||||||| |||||  |||||||||||    
T  30682180 tcgtttaaggtttttgcacgactattaaaaaaatgattaattgtgttaattttattggtaaaatta 30682245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 35311199 - 35311272
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||| ||| |||||||||||| || | |||||||||| |||||||||||| |||| ||||  ||||||||||||    
T  35311199 aatattaagcgtttaaggtttgtgcacgattattaaggaaatgattaattatgttaatttcaatggtaaaatta 35311272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 36985923 - 36985854
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||| ||| | || |||| || || ||||||||||||||||||||||  ||||||||||||||||    
T  36985923 tcgtttaagatttttatacgatttttcaggaaatgattaattgtgttgatttcaatggtaaaattagtat 36985854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 49175918 - 49175987
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| || | |||| |||||||||||||||||||||  |||||  ||| ||||||||||||    
T  49175918 tcgtttaaggtttgtgcatgatttttaagaaaatgattaattgtggagatttcaatgataaaattagtat 49175987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 54506925 - 54506860
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||| ||| | || | ||||||||||||||||||| |||||||||||  ||||||||||||    
T  54506925 tcgtttaagatttgtttacggttattaagaaaatgattaactgtgttgatttcaatggtaaaatta 54506860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 28500876 - 28500940
Alignment:
Q  202 cgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||| |||| || | |||||||||| |||||||| |||||||||||||  ||||||||||||    
T  28500876 cgtttaatgtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaatta 28500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 31370312 - 31370360
Alignment:
Q  224 attaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    ||||| ||||||||||||| ||||||||| | |||||||||||||||||    
T  31370312 attaaaaaaatgattaattatgttgatttcgttggtaaaattagtatta 31370360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 50263916 - 50263968
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgatttt 253  Q
    ||||||||||||| || | ||||||||||||||||||| | ||||||||||||    
T  50263916 tcgtttaaggtttgtgcacgattattaagaaaatgattcactgtgttgatttt 50263968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Original strand, 375424 - 375459
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||||||||||||||| |||||||    
T  375424 tactacctccgtccttaattataagacccttttgag 375459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 304
Target Start/End: Complemental strand, 626005 - 625970
Alignment:
Q  269 attactacctccgtccttaattataagacctttttg 304  Q
    |||||||||||||||| |||||||||||||||||||    
T  626005 attactacctccgtccctaattataagacctttttg 625970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 3670016 - 3669965
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattt 252  Q
    ||||||||| |||||| | |||| |||| |||||||||||||||||||||||    
T  3670016 tcgtttaagatttatgcatgatttttaaaaaaatgattaattgtgttgattt 3669965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Original strand, 6083284 - 6083319
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    ||||| ||||||||||||||||||||||||||||||    
T  6083284 tactatctccgtccttaattataagacctttttgag 6083319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Complemental strand, 26866900 - 26866865
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||||||||||||||| |||||||    
T  26866900 tactacctccgtccttaattataagacccttttgag 26866865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 340
Target Start/End: Complemental strand, 55563167 - 55563095
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttgagnnnnnnntttcttccctttttataagactccttt 340  Q
    ||||||||||||||||| ||||||||||||| |||||||       |||  |||||||||||||||| |||||    
T  55563167 tattactacctccgtccctaattataagacccttttgagattttttttttgtccctttttataagaccccttt 55563095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 5618660 - 5618614
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||| |||||||| | ||||||||||||| ||||||||||||    
T  5618660 gattattaaaaaaatgatgagttgtgttgattttaatggtaaaatta 5618614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Complemental strand, 6629512 - 6629478
Alignment:
Q  268 tattactacctccgtccttaattataagacctttt 302  Q
    ||||||||||||||||| |||||||||||||||||    
T  6629512 tattactacctccgtccctaattataagacctttt 6629478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 8175583 - 8175629
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||| ||||||| |||||||||||||||  ||||||||||||    
T  8175583 gattattaaaaaaatgaataattgtgttgatttcaatggtaaaatta 8175629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 25708718 - 25708680
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttgag 306  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  25708718 tattactccctccgtccctaattataagacctttttgag 25708680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 305
Target Start/End: Complemental strand, 37776774 - 37776740
Alignment:
Q  271 tactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||||||||||||||||| ||||||    
T  37776774 tactacctccgtccttaattataagacccttttga 37776740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 39157876 - 39157922
Alignment:
Q  220 gattattaagaaaatgattaattgtg-ttgattttgatggtaaaatt 265  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||    
T  39157876 gattattaagaaaatgattagttgtgtttaattttgatggtaaaatt 39157922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 305
Target Start/End: Original strand, 39797434 - 39797468
Alignment:
Q  271 tactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||| ||||||||||||||||||||    
T  39797434 tactacctccgtccctaattataagacctttttga 39797468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 53564396 - 53564358
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  53564396 tattactacctccgtccctaattataagacccttttgag 53564358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 5841411 - 5841476
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| || |  | ||||||| |||||||| |||| ||||||||| ||||||||||||    
T  5841411 tcgtttaaggtttgtgcacaactattaaggaaatgattgattgcgttgattttaatggtaaaatta 5841476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 6462427 - 6462464
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttga 305  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  6462427 tattactacctccgtccataattataggacctttttga 6462464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 25869839 - 25869896
Alignment:
Q  212 ttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||| |||| || |||||||||||||||||||||||||  ||  |||||||||||    
T  25869839 ttatgtatgattttttagaaaatgattaattgtgttgatttcaattttaaaattagta 25869896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 27880226 - 27880294
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| | || |||| ||||  ||||||||| ||||||||||||  ||||||||||||||||    
T  27880226 tcgtttaaggtttgtatatgatttttaaataaatgatta-ttgtgttgatttcaatggtaaaattagtat 27880294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 36990912 - 36990949
Alignment:
Q  269 attactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||  |||||||||||||||||||||    
T  36990912 attactacctccgtctctaattataagacctttttgag 36990949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 42616887 - 42616952
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||| ||| || | |||||||||  |||||||||| |||||||||||  ||||||||||||    
T  42616887 tcgtttaagttttgtgcatgattattaaagaaatgattaactgtgttgatttcaatggtaaaatta 42616952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 49373732 - 49373695
Alignment:
Q  269 attactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  49373732 attactacctccgtccctaattataagacccttttgag 49373695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 2653528 - 2653488
Alignment:
Q  230 aaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||||||||||  || |||||||||||||    
T  2653528 aaaatgattaattgtgttgatttcaattgtaaaattagtat 2653488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 7698508 - 7698472
Alignment:
Q  269 attactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  7698508 attactacctccgtccctaattataagacccttttga 7698472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 11024897 - 11024933
Alignment:
Q  224 attaagaaaatgattaattgtgttgattttgatggta 260  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  11024897 attaagaaaatgattaatagtgttgattttaatggta 11024933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 30192323 - 30192291
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattt 252  Q
    |||| ||||||||||||||||||||||||||||    
T  30192323 gatttttaagaaaatgattaattgtgttgattt 30192291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 31937067 - 31937111
Alignment:
Q  262 aattagtattactacctccgtccttaattataagacctttttgag 306  Q
    ||||| || |||||||||||||| ||||||||||||| |||||||    
T  31937067 aattaatagtactacctccgtccctaattataagacccttttgag 31937111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 52850488 - 52850456
Alignment:
Q  274 tacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||||||||| |||||||||    
T  52850488 tacctccgtccttaattataagatctttttgag 52850456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 54878054 - 54878018
Alignment:
Q  269 attactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  54878054 attactacctccgtccctaattataagaccgttttga 54878018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 13335361 - 13335284
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||| ||||||||||||||||||| | |||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  13335361 aataataatcgtttaaggtttatgcacgattattaaggaaatggttaattgtgttgattttgatggtaaaattagtat 13335284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 36967498 - 36967433
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||    
T  36967498 tcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaatta 36967433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 45425635 - 45425710
Alignment:
Q  191 ataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||| || ||||||||| |||||| | |||||||||||||||||||||||||||||||||| ||||||||||||    
T  45425635 ataatattagtcgtttaagttttatgcatgattattaagaaaatgattaattgtgttgattttaatggtaaaatta 45425710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 29226212 - 29226278
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29226212 gtttaagatttatgcataattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 29226278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 26626091 - 26626160
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  26626091 tcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgaatttgatggtaaaatttgtat 26626160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 31271158 - 31271093
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  31271158 tcgtttaaggtttgtgtacgattattaagaaaatgattgattgtgttgattttaatggtaaaatta 31271093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 10097970 - 10098035
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| ||| | | ||||||||||||||||||||||| |||||||||||||||||||||    
T  10097970 tcgtttaaggttgatgcatggttattaagaaaatgattaattgtattgattttgatggtaaaatta 10098035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 34393933 - 34394002
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||| ||| ||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34393933 tcgtttaaagttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 34394002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 39300904 - 39300985
Alignment:
Q  185 ctctaaataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| || ||||||||| ||| |||| |||||||||  |||||||||||| ||||||||| |||||||||||||    
T  39300904 ctctaaataatagtagtcgtttaagatttgtgtacgattattaaagaaatgattaattatgttgatttcgatggtaaaatta 39300985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 1875571 - 1875639
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||||||| || | |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  1875571 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 1875639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 32678855 - 32678787
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||| ||||||  | |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  32678855 tcgtttaaagtttatacacgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta 32678787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 9300094 - 9300157
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||||| | |||||||||||||||||||  ||||||||||||| ||||||||||||    
T  9300094 gtttaaggtttatgcacgattattaagaaaatgattgtttgtgttgattttaatggtaaaatta 9300157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 21216080 - 21216147
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    ||||||||||||| || | |||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  21216080 tcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagt 21216147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 40996336 - 40996411
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    |||| ||||||||||||||||||| |  ||| ||||| |||||||||||||||||||||||||  |||||||||||    
T  40996336 aataataatcgtttaaggtttatgcacaattgttaaggaaatgattaattgtgttgattttgaatgtaaaattagt 40996411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 7703135 - 7703200
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||| |||| ||||||||||||||| |||| |||||||||||||||||  ||||||||||||    
T  7703135 tcgtttaaagtttgtgtaagattattaaggaaataattaattgtgttgatttcaatggtaaaatta 7703200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 1739777 - 1739709
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||| |||||||| |||| |||||||||| |||| |||||||||||||||||  |||||||||||||||    
T  1739777 tcgtctaaggtttgtgtacgattattaaggaaataattaattgtgttgatttcaatggtaaaattagta 1739709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 2767291 - 2767339
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  2767291 ttattaaggaaataattaattgtgttgattttgatggtaaaattagtat 2767339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 22771813 - 22771881
Alignment:
Q  200 atcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    ||||||||||||||||| |   |||||||| || |||||||||| ||||||||||||||||||||||||    
T  22771813 atcgtttaaggtttatgcacagttattaaggaattgattaattgggttgattttgatggtaaaattagt 22771881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 39482752 - 39482684
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||| ||| || | |||||||||||||||||||||||||||||||||  | |||||||||||||    
T  39482752 tcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaagggtaaaattagta 39482684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 51247 - 51181
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||| || | |||||||||||||||||||||||||||||||||| || ||||||| |||||    
T  51247 gtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgattttaat-gtaaaataagtat 51181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 42972490 - 42972552
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||| || | ||||||||||||||||||||||||| |||||||  ||||||||||||    
T  42972490 tttaaggtttgtgcacgattattaagaaaatgattaattgttttgatttcaatggtaaaatta 42972552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 4428331 - 4428395
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||||||||  ||| ||||||||||||||| ||||||||||||| ||| ||||||||    
T  4428331 tcgtttaaggtttatgtat-atttttaagaaaatgattatttgtgttgattttaatgataaaatta 4428395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 5053156 - 5053197
Alignment:
Q  225 ttaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  5053156 ttaaggaaatgattaattgtgttgattttgatggtaaaatta 5053197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 10179926 - 10179995
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| || | ||||||||||||||||| || |||| |||||||  ||||||||||||||||    
T  10179926 tcgtttaaggtttgtgcacgattattaagaaaatgagtagttgtattgatttcaatggtaaaattagtat 10179995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 39405899 - 39405830
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| || | |||||||||| ||||||||||||||||| ||||  ||| ||||||||||||    
T  39405899 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtat 39405830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 17719237 - 17719308
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    ||||||||| ||| || | ||||||||| |||||||||||||||  ||||||| |||||||| |||||||||    
T  17719237 tcgtttaagatttgtgcacgattattaaaaaaatgattaattgtaatgattttaatggtaaagttagtatta 17719308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 7173049 - 7172983
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||||| ||||  ||||||||  ||||||||||||||||||||||  ||| |||||||||||    
T  7173049 gtttaaggtttgtgtatcattattaaagaaatgattaattgtgttgatttcaatgataaaattagta 7172983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 39329153 - 39329087
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||| ||| ||||  ||| ||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  39329153 tttaagttttgtgtacaatttttaagaaaatgattaattgtgttaattttaatgataaaattagtat 39329087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 19176134 - 19176171
Alignment:
Q  269 attactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||||||||||||||||| |||||||    
T  19176134 attactacctccgtccttaattataagacccttttgag 19176171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 34948686 - 34948735
Alignment:
Q  221 attattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||| ||||||||||||||||||||||  || |||||||||||||    
T  34948686 attattaaggaaatgattaattgtgttgatttaaatagtaaaattagtat 34948735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 6611815 - 6611767
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    ||||||||| ||||||||||||| |||||||||  ||||||||||||||    
T  6611815 gattattaaaaaaatgattaattatgttgatttcaatggtaaaattagt 6611767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 31231846 - 31231802
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||    
T  31231846 ttattaaggaaatgatgaattgtgtcgattttgatggtaaaatta 31231802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Complemental strand, 13568942 - 13568907
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||||||||||||||| |||||||    
T  13568942 tactacctccgtccttaattataagacccttttgag 13568907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 305
Target Start/End: Original strand, 39406562 - 39406593
Alignment:
Q  274 tacctccgtccttaattataagacctttttga 305  Q
    ||||||||||||||||||||||||||||||||    
T  39406562 tacctccgtccttaattataagacctttttga 39406593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 253
Target Start/End: Original strand, 39465809 - 39465840
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgatttt 253  Q
    ||||||||||||||||||||||||||||||||    
T  39465809 ttattaagaaaatgattaattgtgttgatttt 39465840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Original strand, 40784891 - 40784926
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||| |||||||||||||||||||||    
T  40784891 tactacctccgtccctaattataagacctttttgag 40784926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 10953406 - 10953452
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||| ||||||||||||||||||||||| ||| || |||||    
T  10953406 gattattaaggaaatgattaattgtgttgattttaatgatataatta 10953452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 10961411 - 10961457
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||| ||||||||||||||||||||||| ||| || |||||    
T  10961411 gattattaaggaaatgattaattgtgttgattttaatgatataatta 10961457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 11976905 - 11976983
Alignment:
Q  191 ataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||| || ||||||||||||| || | |||||||| | |||| |||||||||||||||||  |||||| ||| ||||    
T  11976905 ataatattagtcgtttaaggtttgtgcatgattattatggaaatcattaattgtgttgatttcaatggtataatcagta 11976983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 14854932 - 14854978
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||| |||||||||| | |||||||||||||| ||||||||||||    
T  14854932 gattatcaagaaaatgaatcattgtgttgattttaatggtaaaatta 14854978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 305
Target Start/End: Original strand, 36408415 - 36408449
Alignment:
Q  271 tactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||| ||||||||||||||||||||    
T  36408415 tactacctccgtccctaattataagacctttttga 36408449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 44761503 - 44761541
Alignment:
Q  231 aaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  44761503 aaatgattaattgtgttgatttcaatggtaaaattagta 44761541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 6796024 - 6796089
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||| |||| || | ||||||||| |||||||||||  | ||||||||| ||||||||||||    
T  6796024 tcgtttaatgtttgtgcacgattattaataaaatgattaacagcgttgattttaatggtaaaatta 6796089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 31082754 - 31082689
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    ||||| ||||| || | ||| |||||| |||||||||||||| |||||||| ||| ||||||||||    
T  31082754 gtttatggtttgtgcacgataattaaggaaatgattaattgtcttgattttaatgataaaattagt 31082689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 32476424 - 32476359
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| || | | ||||||||||||||||| ||| |||||||||  ||| ||||||||    
T  32476424 tcgtttaaggtttgtgcacggttattaagaaaatgattgattctgttgatttcaatgataaaatta 32476359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 396611 - 396659
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||| |||||||||||| |||||||||  | ||||||||||||||    
T  396611 ttattaaggaaatgattaattatgttgatttcaacggtaaaattagtat 396659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 6050593 - 6050557
Alignment:
Q  270 ttactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  6050593 ttactacctccgtccctaattataagacccttttgag 6050557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 18641418 - 18641382
Alignment:
Q  270 ttactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  18641418 ttactacctccgtccctaattataagacccttttgag 18641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 44580913 - 44580881
Alignment:
Q  274 tacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||| |||||||||||||||||||||    
T  44580913 tacctccgtccctaattataagacctttttgag 44580881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 304
Target Start/End: Complemental strand, 45283832 - 45283796
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttg 304  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  45283832 tattactacctccgtccctaattataagacccttttg 45283796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 21759969 - 21760038
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21759969 tcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 21760038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 38391892 - 38391823
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38391892 tcgtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 38391823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 48609006 - 48608932
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtattacta 275  Q
    |||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  48609006 tcgtttgaggtttatgcatgattattaaggaaatgattaattgtgttgattttgatggtaaaactagtattacta 48608932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 83529 - 83460
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  83529 tcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 83460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 21390454 - 21390377
Alignment:
Q  185 ctctaaataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaa 263  Q
    ||||||||||||| | |||||||||||||||| | |||||||||| ||||||||||||||||| |||||||||||||||    
T  21390454 ctctaaataatac-agtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttgatggtaaaa 21390377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 40076459 - 40076390
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||| | |||||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  40076459 tcgtttaaggtttatgcacgattattaaagaaatgattaattgtgttaattttgatggtaaaattagtat 40076390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 42935805 - 42935740
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| ||| | | |||||||||||||||||||||||||||||||||||||||||||||    
T  42935805 tcgtttaaggttgatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaatta 42935740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 44180349 - 44180280
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||  | |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  44180349 tcgtttaaggtttatacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtat 44180280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 46211575 - 46211507
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  46211575 tcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagta 46211507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 28202296 - 28202359
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||||| | | ||||||||||||| |||||||||||||||||||||||||||||||    
T  28202296 gtttaaggtttatgcacggttattaagaaaataattaattgtgttgattttgatggtaaaatta 28202359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 759079 - 759145
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| |  ||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  759079 tttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagtat 759145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 28103877 - 28103811
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattag 267  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||||  |||||||||||||    
T  28103877 tcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattag 28103811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 33819356 - 33819290
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  33819356 gtttaaggttaatgtacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 33819290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 9786132 - 9786067
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||| | || | |||||||||| ||||||||||||||||||||||||||||||||||||    
T  9786132 tcgtttaaggtctgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaatta 9786067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 44424279 - 44424214
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| ||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  44424279 tcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaatta 44424214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 5524524 - 5524456
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||| |||| || | |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  5524524 tcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 5524456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 24516274 - 24516342
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||||||  | ||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  24516274 tcgtttaaggtttatacacgattattaataaaatgattaattgtgttgatttcaatggtaaaattagta 24516342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 41506054 - 41506118
Alignment:
Q  205 ttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||| | |||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  41506054 ttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttaatggtaaaattagta 41506118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 3178191 - 3178254
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||| || | |||||||||| |||||||| |||||||||||||||||||||||||||    
T  3178191 gtttaaggtttgtgcatgattattaagtaaatgattgattgtgttgattttgatggtaaaatta 3178254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 16560558 - 16560624
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||| |||||| | |||||||||| ||||||||||||||||| ||||||||||||||| ||||||    
T  16560558 tttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagtat 16560624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 16605104 - 16605038
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||| |||||| | |||||||||| ||||||||||||||||| ||||||||||||||| ||||||    
T  16605104 tttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagtat 16605038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 22738845 - 22738776
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||| | |||||||||  |||||||||||||||| |||||  ||||||||||||||||    
T  22738845 tcgtttaaggtttatgcacgattattaaagaaatgattaattgtgtagatttcaatggtaaaattagtat 22738776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 26974173 - 26974108
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| || | |||||||||| ||||||||||||||||||||||  ||||||||||||    
T  26974173 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaatta 26974108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 43874067 - 43874002
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| ||| | | |||||||  ||||||||||||||||||||||||||||||||||||    
T  43874067 tcgtttaaggttgatgcatggttattaaagaaatgattaattgtgttgattttgatggtaaaatta 43874002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 11373413 - 11373481
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||| || || | |||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  11373413 tcgtttaaggattgtgcacgattattaaggaaatgtttaattgtgttgatttcgatggtaaaattagta 11373481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 27921111 - 27921063
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  27921111 ttattaagaaaatgattaattatgttgattttaatggtaaaattagtat 27921063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 13962100 - 13962038
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| | | |||||||| ||||||||||||||||||||||| ||| ||||||||    
T  13962100 tttaaggtttatgcacgtttattaaggaaatgattaattgtgttgattttaatgataaaatta 13962038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 16904523 - 16904458
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| || || ||| ||||||||||||||||||||||||||||  || |||||||||    
T  16904523 tcgtttaaggtttgtgcaaaatttttaagaaaatgattaattgtgttgatttcaatagtaaaatta 16904458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 34100551 - 34100600
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||||    
T  34100551 gattattaagaaaatgattaattgtgttgatttcaatagtaaaattagta 34100600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 29835391 - 29835467
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||| |||||||||||||||| ||   | |||||||| |||||||||||| |||||||||  |||||||||||||||    
T  29835391 aatattaatcgtttaaggtttgtgcgcgcttattaaggaaatgattaattatgttgatttaaatggtaaaattagta 29835467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 2459613 - 2459546
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    |||||||| |||| || | |||||||||| ||||||||||||||||||||||  | ||||||||||||    
T  2459613 tcgtttaatgtttgtgcacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattagt 2459546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 269
Target Start/End: Original strand, 8592426 - 8592493
Alignment:
Q  202 cgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||| || | |||||||||  ||||||||||||||||||||||  ||||| |||||||||    
T  8592426 cgtttaaggtttgtgcatgattattaaagaaatgattaattgtgttgatttcaatggttaaattagta 8592493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 306
Target Start/End: Original strand, 25950831 - 25950866
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||||||||||||||||||||||    
T  25950831 tactacctccgtccttaattataagacctttttgag 25950866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 44719124 - 44719162
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  44719124 tattactacctccgtccttaattataagaccattttgag 44719162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 269
Target Start/End: Complemental strand, 7463366 - 7463289
Alignment:
Q  192 taatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||| || |||||||||| || || | | |||||||| ||||||||||||||||||||||  ||| |||||||||||    
T  7463366 taatattagtcgtttaaggattgtgcacggttattaaggaaatgattaattgtgttgatttcaatgataaaattagta 7463289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 34947644 - 34947579
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| || | | |||||||  ||||||||||||||||||||||  ||||||||||||    
T  34947644 tcgtttaaggtttgtgcatgtttattaaagaaatgattaattgtgttgatttcaatggtaaaatta 34947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 7457425 - 7457473
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    ||||||||| ||||||||||||| |||||||||  ||||||||||||||    
T  7457425 gattattaaaaaaatgattaattatgttgatttcaatggtaaaattagt 7457473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 305
Target Start/End: Original strand, 32759554 - 32759590
Alignment:
Q  269 attactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||||| ||||||||||||||||||||    
T  32759554 attactacctccgtccctaattataagacctttttga 32759590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 2850866 - 2850937
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    ||||||| ||||| || | |||||||||| |||||||||||| |||||||||  ||| |||||||| |||||    
T  2850866 tcgtttatggtttgtgcatgattattaaggaaatgattaattatgttgatttcaatgataaaattaatatta 2850937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Complemental strand, 12631853 - 12631818
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||||||||||||||| |||||||    
T  12631853 tactacctccgtccttaattataagaccattttgag 12631818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Complemental strand, 20951039 - 20951004
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||||||||||||| |||||||||    
T  20951039 tactacctccgtccttaattataagatctttttgag 20951004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 32346039 - 32346102
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||| |||| | |||||||| |||| ||| |||||||||||||  ||||||||||||    
T  32346039 gtttaaggtttgtgtacggttattaaggaaataattgattgtgttgatttcaatggtaaaatta 32346102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 31930482 - 31930544
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaa 263  Q
    |||||||| ||||||| | |||||||||  |||||||| | |||||||||||| |||||||||    
T  31930482 tcgtttaaagtttatgcacgattattaaagaaatgattgactgtgttgattttaatggtaaaa 31930544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 305
Target Start/End: Complemental strand, 35569688 - 35569654
Alignment:
Q  271 tactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||||||||||||||||| ||||||    
T  35569688 tactacctccgtccttaattataagacccttttga 35569654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 305
Target Start/End: Original strand, 35888312 - 35888346
Alignment:
Q  271 tactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||| ||||||||||||||||||||    
T  35888312 tactacctccgtccctaattataagacctttttga 35888346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 49101807 - 49101745
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||| | || |||| ||||||||||||||||||||||| ||||| | | ||||||||    
T  49101807 tttaaggtttgtttacgatttttaagaaaatgattaattgtgtttattttaaggataaaatta 49101745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 12631446 - 12631381
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||| || | |||||||||| |||| ||||||||| |||||||  || ||||||||||||    
T  12631446 tttaaggtttgtgcacgattattaaggaaataattaattgtattgatttcaatagtaaaattagta 12631381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 23670637 - 23670565
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||| |||||||||||||||| || |  |||||||||  ||| |||||||||||||||||  ||||||||||||    
T  23670637 aatattaatcgtttaaggtttgtgcacaattattaagggaat-attaattgtgttgatttccatggtaaaatta 23670565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 19271737 - 19271769
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattt 252  Q
    ||||||||| |||||||||||||||||||||||    
T  19271737 gattattaaaaaaatgattaattgtgttgattt 19271769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 30866110 - 30866046
Alignment:
Q  202 cgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| || | |||||||||  ||||||||||||||||| ||||  |||||| |||||    
T  30866110 cgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttaatttcaatggtataatta 30866046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 304
Target Start/End: Complemental strand, 34896158 - 34896122
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttg 304  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  34896158 tattactacctccgtccttaattataggacttttttg 34896122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 41003192 - 41003156
Alignment:
Q  270 ttactacctccgtccttaattataagacctttttgag 306  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  41003192 ttactccctccgtccttaattataagacccttttgag 41003156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 303
Target Start/End: Complemental strand, 43441149 - 43441117
Alignment:
Q  271 tactacctccgtccttaattataagaccttttt 303  Q
    |||||||||||||||||||| ||||||||||||    
T  43441149 tactacctccgtccttaattgtaagaccttttt 43441117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 29023944 - 29024013
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29023944 tcgtttaaggtttatgcacgattattaaaaaaatgattaattgtgttgattttgatggtaaaattagtat 29024013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 52291038 - 52290962
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||| ||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52291038 aataataatcgtttaaggttgatgtacggttattaagaaaatgattaattgtattgattttgatggtaaaattagta 52290962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 17652885 - 17652811
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtattacta 275  Q
    |||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  17652885 tcgtttgaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaactagtattacta 17652811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 37497637 - 37497560
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||| |||||||||||| |||||| | |||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  37497637 aataataatcgtttaagatttatgcacgattattaaggaaatgatttattgtgttgattttgatggtaaaattagtat 37497560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 11905972 - 11905890
Alignment:
Q  185 ctctaaataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||||   ||||||| ||||||| | |||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  11905972 ctctaaataatact---cgtttaaagtttatgcacgattattaagaaaatgattaattgtgttaattttgatgataaaattagtat 11905890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 10366620 - 10366689
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  10366620 tcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtat 10366689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 37312087 - 37312019
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||||||| | |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  37312087 tcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 37312019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 19823146 - 19823079
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||| || | |||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  19823146 gtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtagaattagtat 19823079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 43253840 - 43253909
Alignment:
Q  200 atcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||||| || | |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  43253840 atcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 43253909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 8679032 - 8679100
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||| |||||| | |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  8679032 tcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 8679100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 24569082 - 24569149
Alignment:
Q  205 ttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    ||||| |||||| | |||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  24569082 ttaagatttatgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatatta 24569149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 34957640 - 34957571
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||| |  |||| |||| ||||||||||||||||||| ||||||||||||||| ||||    
T  34957640 tcgtttaaggtttatggacaattactaaggaaatgattaattgtgttgaatttgatggtaaaatttgtat 34957571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 45710987 - 45710922
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| ||| | | || |||||||||||||||||| |||||||||||||||||||||||    
T  45710987 tcgtttaaggttgatgcacggttgttaagaaaatgattaattatgttgattttgatggtaaaatta 45710922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 54726618 - 54726557
Alignment:
Q  205 ttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||| ||| | | ||||||||||||||||||| |||||||||||||||||||||||||    
T  54726618 ttaaggttgatgcacggttattaagaaaatgattaaatgtgttgattttgatggtaaaatta 54726557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 53560352 - 53560285
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||| ||| | ||| |||||| |||||||||||| |||||||||||||||||||||| ||||    
T  53560352 gtttaaggttgatgcacgatgattaaggaaatgattaattatgttgattttgatggtaaaatttgtat 53560285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 27471475 - 27471405
Alignment:
Q  198 taatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    |||||||||||| ||| || | ||||||||||||||||||||||| |||||||||  ||||| ||||||||    
T  27471475 taatcgtttaagatttgtgcacgattattaagaaaatgattaattatgttgatttcaatggtgaaattagt 27471405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 51064786 - 51064864
Alignment:
Q  191 ataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||| || |||||||| ||||||| | || |||||| ||||||||||||||||||| |||  |||||||||||||||    
T  51064786 ataatattagtcgtttaaagtttatgcacgaatattaaaaaaatgattaattgtgttgctttcaatggtaaaattagta 51064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 1778779 - 1778714
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| || | |||||||||| ||||||||||||||||||||||  ||| ||||||||    
T  1778779 tcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatgataaaatta 1778714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 30190638 - 30190707
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| || | | |||| ||| ||||||||||||||||||||||  ||||||||||||||||    
T  30190638 tcgtttaaggtttgtgcacggttatgaaggaaatgattaattgtgttgatttcaatggtaaaattagtat 30190707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 33491061 - 33491125
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatt 265  Q
    ||||||||||||| || | |||||||||| ||||||||||||||||||||||  || ||||||||    
T  33491061 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatagtaaaatt 33491125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 31158490 - 31158564
Alignment:
Q  191 ataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||| || ||||||||||||| || | ||||||||| |||||||||||||||| |||||| ||| |||||||||    
T  31158490 ataatattagtcgtttaaggtttgtgcacgattattaa-aaaatgattaattgtgctgatttcgatagtaaaatta 31158564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 45811790 - 45811727
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||| |||  |||  |||||||||||||||||| |||||||||| ||||||||||||    
T  45811790 gtttaaggtttgtgtgtgatatttaagaaaatgattaattatgttgattttaatggtaaaatta 45811727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 37695663 - 37695709
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||| ||||||||||||||||||||||  ||||||||||||    
T  37695663 gattattaaggaaatgattaattgtgttgatttcaatggtaaaatta 37695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 43719380 - 43719338
Alignment:
Q  224 attaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  43719380 attaataaaatgattaattgtgttgattttaatggtaaaatta 43719338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 19609444 - 19609371
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||| |||||||||||| ||| |||| || | ||||||||||||||| ||||||||||||  || |||||||||    
T  19609444 aataataatcgtttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaatcgtaaaatta 19609371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 45324126 - 45324089
Alignment:
Q  269 attactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||||||||||||||||| |||||||    
T  45324126 attactacctccgtccttaattataagaccattttgag 45324089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 19612048 - 19611980
Alignment:
Q  198 taatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||| |||||| |||| |||| |||| |||||||| |||||||||||||||||||  ||| ||||||||    
T  19612048 taattgtttaaagtttgtgtacgatttttaagaaagtgattaattgtgttgatttcaatgttaaaatta 19611980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 23004380 - 23004428
Alignment:
Q  221 attattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||| |||||||||||||||| |||||  |||||||||||||||    
T  23004380 attattaaggaaatgattaattgtgtcgatttcaatggtaaaattagta 23004428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 36460394 - 36460462
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||| |||| || | ||||||||||||||| |||||||||||| ||||  || ||||||||||||    
T  36460394 tcgtttaaagtttgtgcacgattattaagaaaattattaattgtgttaatttcaatagtaaaattagta 36460462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 37772943 - 37773007
Alignment:
Q  202 cgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| || | |||||||||| |||||||||||||| ||||||   ||||||||||||    
T  37772943 cgtttaaggtttgtgcatgattattaaggaaatgattaattgtattgattacaatggtaaaatta 37773007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Original strand, 6784463 - 6784498
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||||||||||||||| |||||||    
T  6784463 tactacctccgtccttaattataagacccttttgag 6784498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 12736552 - 12736619
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||| |||| || | |||| ||||| ||||||||||||||||||||| | ||| ||||||||||||    
T  12736552 gtttaaagtttgtgcacgatttttaaggaaatgattaattgtgttgattctaatgataaaattagtat 12736619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 28690762 - 28690825
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||| || | |||||||||  ||||||||||||||||||||||  | ||||||||||    
T  28690762 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaacggtaaaatta 28690825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Complemental strand, 29454823 - 29454788
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||||||||||||||| |||||||    
T  29454823 tactacctccgtccttaattataagacccttttgag 29454788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 270
Target Start/End: Complemental strand, 34750603 - 34750564
Alignment:
Q  231 aaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  34750603 aaatgattgattgtgttgattttaatggtaaaattagtat 34750564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 302
Target Start/End: Original strand, 41824108 - 41824139
Alignment:
Q  271 tactacctccgtccttaattataagacctttt 302  Q
    ||||||||||||||||||||||||||||||||    
T  41824108 tactacctccgtccttaattataagacctttt 41824139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 11632227 - 11632150
Alignment:
Q  191 ataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||| || || |||||| ||| || | ||||||||| |||||||||||||||||||||||  | |||||||||||||    
T  11632227 ataatattagtcatttaagatttgtgcacgattattaa-aaaatgattaattgtgttgatttcaacggtaaaattagta 11632150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 305
Target Start/End: Original strand, 27687986 - 27688020
Alignment:
Q  271 tactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||||||||||||||||| ||||||    
T  27687986 tactacctccgtccttaattataagacccttttga 27688020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 305
Target Start/End: Original strand, 33360885 - 33360919
Alignment:
Q  271 tactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||||||||||||||||| ||||||    
T  33360885 tactacctccgtccttaattataagacccttttga 33360919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 51837940 - 51838002
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||| || | || ||||||| ||||||||||||||||||||||  ||| ||||||||    
T  51837940 tttaaggtttgtgcatgagtattaagtaaatgattaattgtgttgatttcaatgataaaatta 51838002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 38795457 - 38795412
Alignment:
Q  225 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||| ||||||||||||||||| ||||  ||||||||||||||||    
T  38795457 ttaaggaaatgattaattgtgtttatttcaatggtaaaattagtat 38795412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 45049062 - 45049025
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttga 305  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  45049062 tattactccctctgtccttaattataagacctttttga 45049025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 50035198 - 50035263
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||| || | ||||||||||||||||| ||||| |||||||||  ||  |||||||||||    
T  50035198 tttaaggtttgtgcatgattattaagaaaatgaataattatgttgatttcaataataaaattagta 50035263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 4759393 - 4759353
Alignment:
Q  266 agtattactacctccgtccttaattataagacctttttgag 306  Q
    |||| |||||||||||||| ||||||||||||| |||||||    
T  4759393 agtaatactacctccgtccctaattataagacccttttgag 4759353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 14194692 - 14194624
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||||||| || | |||| ||||  ||||||| ||||||||||||||  ||| |||||||||||    
T  14194692 tcgtttaaggtttgtgcacgatttttaaagaaatgatcaattgtgttgatttcaatgataaaattagta 14194624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 26467247 - 26467195
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgatttt 253  Q
    ||||||||||||||| ||  |||  ||||||||||||| ||||||||||||||    
T  26467247 tcgtttaaggtttatatacaattcgtaagaaaatgattgattgtgttgatttt 26467195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 272
Target Start/End: Original strand, 34120390 - 34120486
Alignment:
Q  173 gtactcctctgcctctaaataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    ||||||||| | ||||||||||||   | ||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34120390 gtactcctccgtctctaaataata---accgtttaaagtttatgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaactagtatta 34120486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 16463826 - 16463757
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16463826 tcgtttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 16463757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 36354422 - 36354490
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    ||||||||||||||| |||||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  36354422 tttaaggtttatgtacgattattaaggaaatgactagttgtgttgattttgatggtaaaattagtatta 36354490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 31448669 - 31448735
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattag 267  Q
    ||||||||||||| || | |||||||||| |||||||||||||||||||||||||||||||||||||    
T  31448669 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattag 31448735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 39785725 - 39785657
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||| ||| | | |||||||| |||||||||||||||||||||||||||||||||||||||    
T  39785725 tcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 39785657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 25637615 - 25637551
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    |||||||||||||| | |||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  25637615 gtttaaggtttatgcacgattat-aaggaaatgattaattgtgttgattttgatggtaaaattagt 25637551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 36794421 - 36794352
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||| || ||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36794421 tcgtttaagattgatgcatggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtat 36794352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 39691630 - 39691562
Alignment:
Q  198 taatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||||||| || | |||||||||||||||||||||||||||||||||  ||| ||||||||    
T  39691630 taatcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatgataaaatta 39691562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 26607941 - 26608008
Alignment:
Q  198 taatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatt 265  Q
    |||| ||||||||||| || | |||||||||||||||||||||||||||||||||  |||||||||||    
T  26607941 taatagtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaatt 26608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 9458268 - 9458314
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  9458268 ttattaagaaaataattaattgtgttgattttgatggtaaaattagt 9458314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 11742489 - 11742566
Alignment:
Q  185 ctctaaataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaa 262  Q
    |||||||||||| || |||||||| ||||||| | ||||||||||||| |  |||||||| |||||||||||||||||    
T  11742489 ctctaaataatattagtcgtttaacgtttatgcacgattattaagaaattttttaattgtattgattttgatggtaaa 11742566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 15359063 - 15359128
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| ||| | | |||||||||| ||||||||||||||||||||||||| ||||||||    
T  15359063 tcgtttaaggttgatgcacggttattaagaagatgattaattgtgttgattttgatgataaaatta 15359128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 19937814 - 19937749
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| || | |||||||||| ||||||||||||||||||||||  ||||||||||||    
T  19937814 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaatta 19937749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 27501514 - 27501583
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| |||| |||||||||| ||||||| |||| |||||||||  ||||||||||||||||    
T  27501514 tcgtttaaggtttgtgtatgattattaaggaaatgataaattatgttgatttcaatggtaaaattagtat 27501583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 32783509 - 32783436
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||| ||||| ||||||||| ||| | | |||||||||||||||||||||||||| |||||||| |||||||||    
T  32783509 aataataatcatttaaggttgatgcacggttattaagaaaatgattaattgtgtttattttgatagtaaaatta 32783436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 3323262 - 3323330
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||||||| || | ||||||||  |||||||||||||||||||||||  |||||||||||||||    
T  3323262 tcgtttaaggtttgtgcacgattattataaaaatgattaattgtgttgatttcaatggtaaaattagta 3323330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 16806016 - 16805949
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||| || | |||||||||  ||||||||||||||||||||||| || |||||||||||||    
T  16806016 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtat 16805949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 16845297 - 16845230
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||| || | |||||||||  ||||||||||||||||||||||| || |||||||||||||    
T  16845297 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtat 16845230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 17695470 - 17695403
Alignment:
Q  198 taatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatt 265  Q
    |||||||||||||||| || | |||||||||| |||||||||||||| |||||||  |||||||||||    
T  17695470 taatcgtttaaggtttgtgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaatt 17695403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 37322566 - 37322500
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaag-aaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||||||| | |||||||||| ||||||||| |||||||||||||  ||||||||||||    
T  37322566 tcgtttaaggtttatgcacgattattaaggaaaatgattgattgtgttgatttcaatggtaaaatta 37322500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 45235742 - 45235653
Alignment:
Q  174 tactcctctgcctctaaataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||| | |||||||||||| |   |||||||||||| || | |||||||||| |||||||| |||||||||||||  ||||||||||||    
T  45235742 tactcctccgtctctaaataatagt---cgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaatta 45235653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 35314005 - 35313956
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  35314005 gattattaaggaaatgattaattgtgttgatttcaatggtaaaattagta 35313956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 8947020 - 8947096
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||| ||||||||||| |||| || |  ||||||||| ||||||||||||||||||||||  ||| |||||||||||    
T  8947020 aatattaatcgtttaaagtttgtgcataattattaaggaaatgattaattgtgttgatttcaatgataaaattagta 8947096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 14523348 - 14523413
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||| ||||||| ||| |||||||| ||||||||  ||||||||||||  ||||||||||||    
T  14523348 tcgtttaaagtttatgcaaggttattaaggaaatgattttttgtgttgatttcaatggtaaaatta 14523413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 266
Target Start/End: Original strand, 16377624 - 16377697
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||| |||||||||||| ||| || | |||||||||  |||||||||||||||||||||   ||||||||||||    
T  16377624 aatattaatcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattacaatggtaaaatta 16377697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 34225725 - 34225656
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    ||||||||||| || | |||||||||| |||||| ||||| | |||||||| |||||||| |||||||||    
T  34225725 gtttaaggtttgtgcacgattattaaggaaatgaataattatattgattttaatggtaaacttagtatta 34225656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 39443860 - 39443799
Alignment:
Q  191 ataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattt 252  Q
    |||||| || ||||||||||||| || |  |||||||||||||||||||||| |||||||||    
T  39443860 ataatattagtcgtttaaggtttgtgcacaattattaagaaaatgattaattttgttgattt 39443799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 43699595 - 43699644
Alignment:
Q  221 attattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||||||| |||||||||||  || |||||||||||||    
T  43699595 attattaagaaaatgattaactgtgttgatttcaatagtaaaattagtat 43699644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 11367199 - 11367151
Alignment:
Q  218 aagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||| |||||| ||||||||||||||||||||| || |||||||||    
T  11367199 aagattagtaagaagatgattaattgtgttgattttaattgtaaaatta 11367151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 30830381 - 30830345
Alignment:
Q  269 attactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||| ||||||||||||||||||||||    
T  30830381 attactacctccgttcttaattataagacctttttga 30830345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Complemental strand, 4408815 - 4408780
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||| |||||||||||||||||||||||    
T  4408815 tactacctccgttcttaattataagacctttttgag 4408780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Complemental strand, 44573919 - 44573884
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||||||||||||||| |||||||    
T  44573919 tactacctccgtccttaattataagacccttttgag 44573884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 305
Target Start/End: Original strand, 9701070 - 9701104
Alignment:
Q  271 tactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||||||||||||||||| ||||||    
T  9701070 tactacctccgtccttaattataagacccttttga 9701104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 12520845 - 12520891
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||| || ||||| |||||||||||||||||| ||||||||||||    
T  12520845 gattatcaataaaataattaattgtgttgattttaatggtaaaatta 12520891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 23788966 - 23789004
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttgag 306  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  23788966 tattactccctccgtccttaattataagacccttttgag 23789004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 305
Target Start/End: Complemental strand, 29830791 - 29830757
Alignment:
Q  271 tactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||| ||||||||||||||||||||    
T  29830791 tactacctccgtccctaattataagacctttttga 29830757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 1748682 - 1748646
Alignment:
Q  269 attactacctccgtccttaattataagacctttttga 305  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  1748682 attactaccttcgtccttaattataagaccattttga 1748646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 5789627 - 5789691
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    |||||||||| || | |||||||||| |||||||||||||| |||| ||  || |||||||||||    
T  5789627 tttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagt 5789691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 8912912 - 8912876
Alignment:
Q  270 ttactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  8912912 ttactacctccgtccctaattataagacccttttgag 8912876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 297
Target Start/End: Original strand, 15571181 - 15571209
Alignment:
Q  269 attactacctccgtccttaattataagac 297  Q
    |||||||||||||||||||||||||||||    
T  15571181 attactacctccgtccttaattataagac 15571209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 18374743 - 18374707
Alignment:
Q  269 attactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  18374743 attactacctccgtccctaattataagacccttttga 18374707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 23493023 - 23492979
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaat 264  Q
    ||||||||| |||||||||||  ||||||||||| ||||||||||    
T  23493023 gattattaaaaaaatgattaacagtgttgattttaatggtaaaat 23492979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 24345717 - 24345681
Alignment:
Q  269 attactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  24345717 attactacctccgtccctaattataagacccttttga 24345681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 45628917 - 45628881
Alignment:
Q  270 ttactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  45628917 ttactacctccatccttaattataagacccttttgag 45628881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 11655923 - 11655990
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    |||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  11655923 tcgtttaaggtttatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaattagt 11655990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 29363443 - 29363374
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29363443 tcgtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaactagtat 29363374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 31894179 - 31894255
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||| |||||||||||| ||| |||| |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  31894179 aatattaatcgtttaagatttgtgtatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 31894255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 21010312 - 21010245
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||| |  ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  21010312 gtttaaggtttatgcacaattattaagaaaatgattaattgtgttaattttgatggaaaaattagtat 21010245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 32440622 - 32440693
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    ||||||||| |||||| | | ||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  32440622 tcgtttaagatttatgcacggttatttaggaaatgattaattgtgttgattttgatggtaaaattagtatta 32440693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 27448109 - 27448202
Alignment:
Q  174 tactcctctgcctctaaataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||| | ||||||||||||   |||||||||||||| || |  ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  27448109 tactcctccgtctctaaataata---atcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagtat 27448202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 1063580 - 1063651
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    |||||||| |||||||||  ||| ||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  1063580 tcgtttaaagtttatgtataatttttaagaaaatgattaattgtgttgatttcaatgataaaattagtatta 1063651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 7072297 - 7072230
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    ||||||||||||| ||||  ||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  7072297 tcgtttaaggtttgtgtataatttttaagaaaataattaattgtgttgattttaatggtaaaattagt 7072230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 5302484 - 5302423
Alignment:
Q  205 ttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||| ||| | | ||||||||||||||||||| |||||||||||||||||||||||||    
T  5302484 ttaaggttgatgcacggttattaagaaaatgattaaatgtgttgattttgatggtaaaatta 5302423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 6802068 - 6802003
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||| || ||| | | ||||||||||||||||||||| |||||||||||||||||||||||    
T  6802068 tcgtttaagattgatgcatggttattaagaaaatgattaattatgttgattttgatggtaaaatta 6802003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 1781939 - 1781871
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||||||| | |||| |||||||||||||||||| ||||||| |  |||||||||||||||    
T  1781939 tcgtttaaggtttatgcacgattgttaagaaaatgattaattatgttgatctcaatggtaaaattagta 1781871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 23142801 - 23142737
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    ||||||||||||  | |||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  23142801 tttaaggtttatccacgattattaagaaaatgattaattgtgttgatttcaatggtaaaaatagt 23142737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 3291745 - 3291816
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    ||||||||||||| || | |||||||||| |||||||||||||| | |||||| ||||||| ||||||||||    
T  3291745 tcgtttaaggtttttgcacgattattaaggaaatgattaattgtatcgattttaatggtaatattagtatta 3291816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 6834349 - 6834411
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||| ||||||| | ||||||||||||||| ||||||||||||||||||||| || ||||||    
T  6834349 tttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaatta 6834411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 13087667 - 13087602
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| ||  | ||||||||||||| |||||||||||||||||||  ||||||||||||    
T  13087667 tcgtttaaggttcataaacgattattaagaaagtgattaattgtgttgatttcaatggtaaaatta 13087602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 15058254 - 15058187
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    ||||||||||||| || | |||||||||||||||||||||||  ||| ||||  ||||||||||||||    
T  15058254 tcgtttaaggtttgtgcacgattattaagaaaatgattaattaagttaatttcaatggtaaaattagt 15058187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 13909542 - 13909494
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    |||||||||| |||||||||| |||||||||||  ||||||||||||||    
T  13909542 gattattaaggaaatgattaaatgtgttgatttcaatggtaaaattagt 13909494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 30717016 - 30716968
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||| |||||||||||| | |||| ||||||||||||||||||||    
T  30717016 ttattaaggaaatgattaattttattgactttgatggtaaaattagtat 30716968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 3720218 - 3720269
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattt 252  Q
    ||||||||||||| || | |||||||||  ||||||||||||||||||||||    
T  3720218 tcgtttaaggtttgtgcacgattattaatgaaatgattaattgtgttgattt 3720269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Complemental strand, 5576414 - 5576379
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||||||||||||| ||||||||    
T  5576414 tactacctccgtccttaattataagacgtttttgag 5576379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 1955979 - 1956025
Alignment:
Q  224 attaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||| |||||||||| |||||||  ||||||||||||||||    
T  1955979 attaagaaaaagattaattgtattgatttcaatggtaaaattagtat 1956025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 2090657 - 2090693
Alignment:
Q  270 ttactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  2090657 ttactacctccgtccctaattataagacccttttgag 2090693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 2423736 - 2423692
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaat 264  Q
    ||||||| ||||||||||||||  |||||||||| ||||||||||    
T  2423736 gattattcagaaaatgattaatattgttgattttaatggtaaaat 2423692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 303
Target Start/End: Complemental strand, 9299465 - 9299433
Alignment:
Q  271 tactacctccgtccttaattataagaccttttt 303  Q
    ||||||||||||| |||||||||||||||||||    
T  9299465 tactacctccgtctttaattataagaccttttt 9299433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 12438780 - 12438824
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaat 264  Q
    |||||||||||||||||| ||| || |||||||| ||||||||||    
T  12438780 gattattaagaaaatgatgaatagtattgattttaatggtaaaat 12438824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 13011158 - 13011122
Alignment:
Q  270 ttactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||||||||||||| | |||||||    
T  13011158 ttactacctccgtccttaattataagatccttttgag 13011122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 17172 - 17104
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  17172 tcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 17104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 21060767 - 21060696
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    |||||||||||||||| | | |||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  21060767 tcgtttaaggtttatgcacggttattagggaaatgattaattgtgtttattttgatggtaaaattagtatta 21060696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 2232043 - 2232117
Alignment:
Q  195 tactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||| ||||||||||||| || | ||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  2232043 tactagtcgtttaaggtttgtgcacgattattaagaaaatgaataattgtgttgatttcaatggtaaaattagta 2232117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 40900052 - 40899986
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| | | |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  40900052 tttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggcaaaattagtat 40899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Original strand, 7827894 - 7827971
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||| |||||||||||||||| |  | ||||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  7827894 aataataatcgtttaaggtttgtacacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtat 7827971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 9515883 - 9515814
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| || | ||||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  9515883 tcgtttaaggtttgtgcacgattattaagataatgattaattgtgttgatttcaatggtaaaattagtat 9515814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 2588044 - 2588112
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||| ||| |   |||||||| |||||||||||||||||||||||||||||||||||||||    
T  2588044 tcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattagta 2588112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 15818456 - 15818524
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||||||| | |||||||||| ||||| ||||||||||||||||  |||||||||||||||    
T  15818456 tcgtttaaggtttatgcacgattattaaggaaatgtttaattgtgttgatttcaatggtaaaattagta 15818524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 40530200 - 40530268
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||||| | || | |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  40530200 tcgtttaaggtctgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagta 40530268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 19930078 - 19930021
Alignment:
Q  206 taaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaa 263  Q
    |||| |||||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  19930078 taagatttatgcacgattattaagaaaatgattaattttgttgattttgatggtaaaa 19930021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 29374479 - 29374414
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||||| |||| ||||||||||||||||||||| |||||||||  ||| ||||||||    
T  29374479 tcgtttaaggtttatttaaggttattaagaaaatgattaattatgttgatttcaatgataaaatta 29374414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 843582 - 843509
Alignment:
Q  193 aatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||| |||| ||||||||||| || | ||||||||||||||||||||||| |||||||||  ||| ||||||||    
T  843582 aataataattgtttaaggtttgtgcacgattattaagaaaatgattaattttgttgatttcaatgataaaatta 843509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 6753635 - 6753703
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||||||||||| | ||||||||||||||||||||||| | || ||||  ||||||||||||||||    
T  6753635 tcgtttaaggtttatgcacgattattaagaaaatgattaatt-tattaatttcaatggtaaaattagtat 6753703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 8698444 - 8698379
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    ||||||||||| || | |||||||||  ||||||||||||||||||||||  ||||||||||||||    
T  8698444 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattagt 8698379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 27542932 - 27542867
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||||| || | |||||||||| |||||||| |||||||||||||  ||||||||||||    
T  27542932 tcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaatta 27542867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 31655190 - 31655125
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||| |||| |||| |||||||||  ||||||||||||||||||||||  ||||||||||||    
T  31655190 tcgtttaaagtttgtgtacgattattaaagaaatgattaattgtgttgatttcaatggtaaaatta 31655125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 4818688 - 4818620
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    ||||||||||||| || | |||||||||| |||| |||||||||||||||||  || ||||||||||||    
T  4818688 tcgtttaaggtttgtgcacgattattaaggaaataattaattgtgttgatttcaattgtaaaattagta 4818620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 3348122 - 3348169
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  3348122 ttattaaggaaattattaattatgttgattttgatggtaaaattagta 3348169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 8724987 - 8725050
Alignment:
Q  203 gtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||||| || | |||||||||  ||||||||||||||||||||||  ||||||||||||    
T  8724987 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaatta 8725050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 42922843 - 42922894
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattt 252  Q
    ||||||||| ||| || | |||||||||||||||||||||||||||||||||    
T  42922843 tcgtttaagatttgtgcatgattattaagaaaatgattaattgtgttgattt 42922894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 38508182 - 38508232
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||| ||||||||||||||||||||||| ||||  ||||||||||||||||    
T  38508182 gatttttaagaaaatgattaattgtgttaatttcaatggtaaaattagtat 38508232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 29570529 - 29570464
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||| ||| || | |||||||||  ||||||||||||||||||||||| ||| ||||||||    
T  29570529 tcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattttaatgttaaaatta 29570464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 30512661 - 30512726
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||| ||| ||||||| | |||||||||| |||||||||||||| |||||||  ||||||||||||    
T  30512661 tcgtataaagtttatgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaatta 30512726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 30553001 - 30553066
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||| ||| ||||||| | |||||||||| |||||||||||||| |||||||  ||||||||||||    
T  30553001 tcgtataaagtttatgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaatta 30553066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 41062161 - 41062205
Alignment:
Q  226 taagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||    
T  41062161 taagaaaataattaattatgttgattttgatgataaaattagtat 41062205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 41496198 - 41496150
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    ||||||||| ||||| |||||||||||||||||  ||||||||||||||    
T  41496198 gattattaaaaaaataattaattgtgttgatttcaatggtaaaattagt 41496150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 272
Target Start/End: Complemental strand, 3076703 - 3076656
Alignment:
Q  225 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    |||| |||||||||||||||||||||||  ||| ||||||||||||||    
T  3076703 ttaacaaaatgattaattgtgttgatttcaatgataaaattagtatta 3076656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 306
Target Start/End: Original strand, 5527974 - 5528009
Alignment:
Q  271 tactacctccgtccttaattataagacctttttgag 306  Q
    |||| |||||||||||||||||||||||||||||||    
T  5527974 tactccctccgtccttaattataagacctttttgag 5528009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 305
Target Start/End: Complemental strand, 14570928 - 14570893
Alignment:
Q  270 ttactacctccgtccttaattataagacctttttga 305  Q
    ||||||||||||||| ||||||||||||||||||||    
T  14570928 ttactacctccgtccctaattataagacctttttga 14570893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 19571979 - 19571941
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  19571979 tattactacctccgtccctaattataagacccttttgag 19571941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 23286514 - 23286476
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  23286514 tattactacctccgtccctaattataagacccttttgag 23286476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 305
Target Start/End: Complemental strand, 34889316 - 34889282
Alignment:
Q  271 tactacctccgtccttaattataagacctttttga 305  Q
    |||||||||||||||||||||||||| ||||||||    
T  34889316 tactacctccgtccttaattataagatctttttga 34889282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 37184058 - 37184120
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||| ||| || |||||| |||| |||||||||||||| ||||||||  ||||||||||||    
T  37184058 tttaagttttgtgcaagatttttaaaaaaatgattaattgagttgatttcaatggtaaaatta 37184120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 6615875 - 6615924
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||  |||| |||||||||||||||||  |||||||||||||||    
T  6615875 gattattaaataaataattaattgtgttgatttcaatggtaaaattagta 6615924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 11796169 - 11796214
Alignment:
Q  227 aagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    ||||||||| ||||||||||||||||| ||| |||||||| |||||    
T  11796169 aagaaaatggttaattgtgttgattttaatgataaaattaatatta 11796214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 18890555 - 18890600
Alignment:
Q  225 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||||| ||| |||| |||| ||||||||||||||||    
T  18890555 ttaagaaaatgattagttgagttgtttttaatggtaaaattagtat 18890600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 43060450 - 43060413
Alignment:
Q  269 attactacctccgtccttaattataagacctttttgag 306  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  43060450 attactacctccgtccctaattataagacccttttgag 43060413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 1265940 - 1265984
Alignment:
Q  262 aattagtattactacctccgtccttaattataagacctttttgag 306  Q
    ||||| ||||||| ||||||||| ||||||||||||| |||||||    
T  1265940 aattattattactccctccgtccctaattataagacccttttgag 1265984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 5731893 - 5731861
Alignment:
Q  221 attattaagaaaatgattaattgtgttgatttt 253  Q
    ||||||||||||||||||||||||||| |||||    
T  5731893 attattaagaaaatgattaattgtgttcatttt 5731861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 41478945 - 41478897
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    |||| ||||||||||||||||||||| | ||||  ||||||||||||||    
T  41478945 gatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagt 41478897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 41492420 - 41492372
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    |||| ||||||||||||||||||||| | ||||  ||||||||||||||    
T  41492420 gatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagt 41492372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 39249 - 39156
Alignment:
Q  174 tactcctctgcctctaaataatactaatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||| | ||||||||||||   |||||||||||||| || |  ||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  39249 tactcctccgtctctaaataata---atcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagtat 39156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 252507 - 252575
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 269  Q
    |||||||||||||  ||| |||||||||  |||||||||||| |||||||||| |||||||||||||||    
T  252507 tcgtttaaggtttgcgtatgattattaaagaaatgattaattatgttgattttaatggtaaaattagta 252575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 1841 - 1772
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||| |||||  | | ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1841 tcgtttaagatttatacacggttattaagaaaatgattaattatgttgattttgatggtaaaattagtat 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 20334 - 20400
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||| || || |||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  20334 tttaagggttgtgcaagattattaattaaatgattaattgtgttgattttgattgtaaaattagtat 20400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 1798 - 1860
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||| ||||||| | ||||||||||||||| ||||||||||||||||||||| || ||||||    
T  1798 tttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaatta 1860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 50341 - 50272
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    ||||||||||||| || | |||||||||| ||||||||||||||||| ||||  ||| ||||||||||||    
T  50341 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtat 50272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 253
Target Start/End: Complemental strand, 22692 - 22661
Alignment:
Q  222 ttattaagaaaatgattaattgtgttgatttt 253  Q
    ||||||||||||||||||||||||||||||||    
T  22692 ttattaagaaaatgattaattgtgttgatttt 22661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 305
Target Start/End: Original strand, 45516 - 45547
Alignment:
Q  274 tacctccgtccttaattataagacctttttga 305  Q
    ||||||||||||||||||||||||||||||||    
T  45516 tacctccgtccttaattataagacctttttga 45547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 5530 - 5462
Alignment:
Q  198 taatcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||||||| |  | ||||||||||||||||||||| |||||||| ||  ||||||||||||    
T  5530 taatcgtttaaggtttgtacatgattattaagaaaatgattaactgtgttgaattcaatggtaaaatta 5462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 105820 - 105756
Alignment:
Q  202 cgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||| |||||| | |||||||||| ||||||||||||||||| ||||  ||||||||||||    
T  105820 cgtttaagatttatgcatgattattaagtaaatgattaattgtgtttatttcaatggtaaaatta 105756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 272
Target Start/End: Original strand, 7959 - 8030
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatta 272  Q
    ||||||| |||| ||| | | |||||||| |||||||||||| ||||||||| ||||||||||||| |||||    
T  7959 tcgtttacggttgatgcacggttattaaggaaatgattaattttgttgatttggatggtaaaattaatatta 8030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 16216 - 16170
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  16216 gattattaaggaaatgattaattgtgttgattttaatgataaaatta 16170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 1103 - 1055
Alignment:
Q  220 gattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    ||||||||| ||||||||||||| |||||||||  ||||||||||||||    
T  1103 gattattaaaaaaatgattaattatgttgatttcaatggtaaaattagt 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0883 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0883
Description:

Target: scaffold0883; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 305
Target Start/End: Original strand, 1723 - 1754
Alignment:
Q  274 tacctccgtccttaattataagacctttttga 305  Q
    ||||||||||||||||||||||||||||||||    
T  1723 tacctccgtccttaattataagacctttttga 1754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 5148 - 5186
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  5148 tattactacctccgtccctaattataagacccttttgag 5186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 10222 - 10184
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  10222 tattactacctccgtccctaattataagacccttttgag 10184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 18494 - 18532
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  18494 tattactacctccgtccctaattataagacccttttgag 18532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Original strand, 3435 - 3473
Alignment:
Q  268 tattactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  3435 tattactacctccgtccctaattataagacccttttgag 3473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 2162 - 2097
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    |||||||||||| ||| | |||||||||| || |||||||||||||| ||||  ||| ||||||||    
T  2162 tcgtttaaggttcatgcacgattattaaggaagtgattaattgtgttaatttcaatgataaaatta 2097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 6263 - 6332
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||||||| |||| || | |||| ||||  ||||||||||||||||||||| | ||| ||||||||||||    
T  6263 tcgtttaaagtttgtgcacgatttttaacgaaatgattaattgtgttgattctaatgataaaattagtat 6332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 136015 - 136080
Alignment:
Q  201 tcgtttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaatta 266  Q
    ||||||||| |||||| | |||||||||  |||||||||||  |||||||||  ||||||||||||    
T  136015 tcgtttaagatttatgcacgattattaaataaatgattaataatgttgatttcaatggtaaaatta 136080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 14172 - 14217
Alignment:
Q  225 ttaagaaaatgattaattgtgttgattttgatggtaaaattagtat 270  Q
    |||| ||||||||||| |||||||||||| || |||||||||||||    
T  14172 ttaataaaatgattaaatgtgttgattttaatcgtaaaattagtat 14217  T

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Target: scaffold0159 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 34000 - 34064
Alignment:
Q  204 tttaaggtttatgtaagattattaagaaaatgattaattgtgttgattttgatggtaaaattagt 268  Q
    |||||||||| || | |||||||||| |||||||||||||| |||| ||  || |||||||||||    
T  34000 tttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagt 34064  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 48653 - 48689
Alignment:
Q  270 ttactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  48653 ttactacctccgtccctaattataagacccttttgag 48689  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 104099 - 104063
Alignment:
Q  270 ttactacctccgtccttaattataagacctttttgag 306  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  104099 ttactacctccgtccctaattataagatctttttgag 104063  T

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