View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12861_low_7 (Length: 335)
Name: NF12861_low_7
Description: NF12861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12861_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 10 - 319
Target Start/End: Complemental strand, 44952426 - 44952119
Alignment:
| Q |
10 |
cacagacacactagatgtggatctatttgttggatcacatgagaacaatgagaggggaattcctaagtgacataggcagtacttaattcacgatgtcaga |
109 |
Q |
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| T |
44952426 |
cacaaacacactagatgtggatctatttgttggatcacatgagaacaatgagaggggaattcctaagtgacataggcagtacttaattcacgatgtcaga |
44952327 |
T |
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| Q |
110 |
agctaccatgcaacactcctatgttgttttgtgtgtcacatatatggacatcgatcgagtagagtgactacatgagttttgattgcatctgtctctgaat |
209 |
Q |
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| T |
44952326 |
agctaccatgcaac--tcctatgttgttttgtgtgtcacatatatggacatcgatcgagtagaatgactacatgagttttgattgcatctgtctctgaat |
44952229 |
T |
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| Q |
210 |
gaacatctaccacattccttgacttttgtctgaagttagaaatgttaccaaaatgtgaaatagaagtatcaagtgaacatgcgtgttcctaagtaaatgt |
309 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
44952228 |
gaacatctaccacattccttgacttttgtctgaagttagaaatgttaccaaaatgtgaaatagaagtatcaagtgaacatgcgtgtttctaagtaaatgt |
44952129 |
T |
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| Q |
310 |
gtatttgata |
319 |
Q |
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| T |
44952128 |
gtatttgata |
44952119 |
T |
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