View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12863_high_3 (Length: 404)
Name: NF12863_high_3
Description: NF12863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12863_high_3 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 22 - 396
Target Start/End: Complemental strand, 12931050 - 12930678
Alignment:
| Q |
22 |
tgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12931050 |
tgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaa |
12930951 |
T |
|
| Q |
122 |
n--tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattaca |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930950 |
aaatgaacaccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattaca |
12930851 |
T |
|
| Q |
220 |
atattctctccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctag |
319 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
12930850 |
atattctctccactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttttattctaatgctattattttatagcacctag |
12930755 |
T |
|
| Q |
320 |
aagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
396 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
12930754 |
aagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
12930678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 32 - 396
Target Start/End: Complemental strand, 12935786 - 12935424
Alignment:
| Q |
32 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnn--tgaacac |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||| ||||||| |
|
|
| T |
12935786 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaattcaaaagaaactggatcttgcagcgcagcggtagcgataaaaaaatgaacac |
12935687 |
T |
|
| Q |
130 |
caatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935686 |
caatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
12935587 |
T |
|
| Q |
230 |
cactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttataga |
329 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12935586 |
cactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttttactctaatgctattattttatagcacctagaagttataga |
12935491 |
T |
|
| Q |
330 |
gatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
396 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
12935490 |
gatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
12935424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 26504985 - 26505055
Alignment:
| Q |
167 |
aaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccactctct |
237 |
Q |
| |
|
|||||||| | ||||||||| |||||||||| |||||| |||| |||||||||||||||| || ||||||| |
|
|
| T |
26504985 |
aaaaccacagtacaaactccaaaaaatattcaactataataaaaaatattacaatattctttcaactctct |
26505055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 15589060 - 15588948
Alignment:
| Q |
123 |
tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaata |
222 |
Q |
| |
|
|||||| ||||||||| || ||||||||||| || |||| |||||| || | ||||||||| ||||||||| |||| ||| ||| |||||||||| | |
|
|
| T |
15589060 |
tgaacatcaatatttattttgaaaaaccctctattaatgagagaaaaatcaagtgacaaactctaaaaaatatttcactttatcaaacaatattacaaca |
15588961 |
T |
|
| Q |
223 |
ttctctccactct |
235 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
15588960 |
ttttctccactct |
15588948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 26504850 - 26504895
Alignment:
| Q |
40 |
tcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaa |
85 |
Q |
| |
|
|||||||| |||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
26504850 |
tcgacgagtttaatggaagtgtaaattaaaatttcaaaatccaaaa |
26504895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 273; Significance: 1e-152; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 22 - 396
Target Start/End: Complemental strand, 14174312 - 14173939
Alignment:
| Q |
22 |
tgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14174312 |
tgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagtgataaaa |
14174213 |
T |
|
| Q |
122 |
n---tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattac |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174212 |
aaaatgaacaccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattac |
14174113 |
T |
|
| Q |
219 |
aatattctctccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcaccta |
318 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
14174112 |
aatattctctccactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcaccta |
14174017 |
T |
|
| Q |
319 |
gaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
396 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14174016 |
gaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
14173939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 22 - 396
Target Start/End: Original strand, 28611558 - 28611931
Alignment:
| Q |
22 |
tgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28611558 |
tgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaa |
28611657 |
T |
|
| Q |
122 |
n---tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattac |
218 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611658 |
aaaatgaacaccaatatttaacgtgaaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattac |
28611757 |
T |
|
| Q |
219 |
aatattctctccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcaccta |
318 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
28611758 |
aatattctctccactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcaccta |
28611853 |
T |
|
| Q |
319 |
gaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
396 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
28611854 |
gaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
28611931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 31 - 396
Target Start/End: Complemental strand, 14179057 - 14178693
Alignment:
| Q |
31 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnn---tgaac |
127 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
14179057 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcaataaaaaaaatgaac |
14178958 |
T |
|
| Q |
128 |
accaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
227 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178957 |
accaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
14178858 |
T |
|
| Q |
228 |
tccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttata |
327 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
14178857 |
tccactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttata |
14178762 |
T |
|
| Q |
328 |
gagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
396 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14178761 |
gagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
14178693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 31 - 396
Target Start/End: Original strand, 28606805 - 28607169
Alignment:
| Q |
31 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnn---tgaac |
127 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |
|
|
| T |
28606805 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaaattaac |
28606904 |
T |
|
| Q |
128 |
accaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
227 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28606905 |
accaatatttaacgtgaaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
28607004 |
T |
|
| Q |
228 |
tccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttata |
327 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28607005 |
tccactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttata |
28607100 |
T |
|
| Q |
328 |
gagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
396 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
28607101 |
gagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
28607169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 32 - 396
Target Start/End: Complemental strand, 44161949 - 44161588
Alignment:
| Q |
32 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnn---tgaaca |
128 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
44161949 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcgataaaaaaaatgaaca |
44161850 |
T |
|
| Q |
129 |
ccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctct |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
44161849 |
ccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaat--tctct |
44161752 |
T |
|
| Q |
229 |
ccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatag |
328 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
44161751 |
ccactctcttacacacaca----agagatacaatatagtgtttcccgtaagacctacttctattctaatgctattattttatagcacctagaagttatag |
44161656 |
T |
|
| Q |
329 |
agatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
396 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
44161655 |
agatgatacccacccggtgtatttttcccacactctctggatttactcaacactctattattcctctc |
44161588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 32 - 390
Target Start/End: Complemental strand, 11104829 - 11104477
Alignment:
| Q |
32 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnntgaacacca |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
11104829 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagctgtagcgataaaaatgaacacca |
11104730 |
T |
|
| Q |
132 |
atatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
231 |
Q |
| |
|
||||||||| | ||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
11104729 |
atatttaacatagaaaatcctctaatatcgagggtaaa-ccacgggacaaactccgaaaaatattccaccatatctaagaatattacaatattctctcca |
11104631 |
T |
|
| Q |
232 |
ctctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
331 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
11104630 |
ctctcttacacacaa-----agagatacaatatagtgtttcccgtgagacccactcctattcaaatgctattattttataacacctagaagttatagaga |
11104536 |
T |
|
| Q |
332 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctattttt |
390 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
11104535 |
tgatatccacccggtgtatttttcctacactctctggatttactcaacactctattttt |
11104477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 31 - 336
Target Start/End: Original strand, 48826701 - 48827000
Alignment:
| Q |
31 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnnt-gaacac |
129 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
48826701 |
ttgttgggatcgacgagcttaacgcaattgtaaattaaaatttcaaaattcaa--gagattggatcttgcagcgcagcggtagcgatagaaaaagaacac |
48826798 |
T |
|
| Q |
130 |
caatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
229 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48826799 |
caatatttaacgtggaaaatcctctaataccgagggaaaaatcacgggacaa-ctccgaaaaatattccactatattaaagaatattacaatattctctt |
48826897 |
T |
|
| Q |
230 |
cactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttataga |
329 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
48826898 |
cgctctct----tacacacacaagagatacaatatagtgtttcccgtgagattcactcctatttgaatgctattattttatagcacctagaagttataga |
48826993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 59 - 229
Target Start/End: Original strand, 48708086 - 48708256
Alignment:
| Q |
59 |
tgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnntgaacaccaatatttaacgtggaaaaccctctaata |
158 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| ||||| || ||||| ||| || | || ||||||||||||| || ||||| || ||||| |
|
|
| T |
48708086 |
tgtaaattaaaattccaaaatataaaagaaattgaatcttacaacgcagtggtggcgataaaattaaataccaatatttaacatgaaaaactctataata |
48708185 |
T |
|
| Q |
159 |
ctgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
229 |
Q |
| |
|
|| || ||||||||||| |||||||||| ||||||||| || ||||||||| ||||||||||||||||||| |
|
|
| T |
48708186 |
ctaagagaaaaaccacgtgacaaactccaaaaaatatttcattatattaaaaaatattacaatattctctc |
48708256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 24726288 - 24726381
Alignment:
| Q |
144 |
gaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccactctct |
237 |
Q |
| |
|
||||||| ||||||| |||||||| ||||| ||||||||| ||||||||||||| |||||||||||| || | ||||||||||||| ||||| |
|
|
| T |
24726288 |
gaaaaccatctaatatcaagggaaaagccacgagacaaactctgaaaaatattccattatattaaagaacataataatattctctccattctct |
24726381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 32 - 396
Target Start/End: Complemental strand, 34907503 - 34907141
Alignment:
| Q |
32 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnn--tgaacac |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
34907503 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaatgaacac |
34907404 |
T |
|
| Q |
130 |
caatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907403 |
caatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
34907304 |
T |
|
| Q |
230 |
cactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttataga |
329 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
34907303 |
cactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttttattctaatgctattattttatagcacctagaagttataga |
34907208 |
T |
|
| Q |
330 |
gatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
396 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
34907207 |
gatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctc |
34907141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 32 - 396
Target Start/End: Original strand, 37040426 - 37040789
Alignment:
| Q |
32 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnn---tgaaca |
128 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||| |
|
|
| T |
37040426 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaaaagactggatcttgcagcgcagcggtagcgataaaaaaaatgaaca |
37040525 |
T |
|
| Q |
129 |
ccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctct |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
37040526 |
ccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattttct |
37040625 |
T |
|
| Q |
229 |
ccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatag |
328 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
37040626 |
ccactctctcacacacaca----agagatacaatatagtgttttccgtgagacctacttctattctaatgctattattttatagcacctagaagttatag |
37040721 |
T |
|
| Q |
329 |
agatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
396 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
37040722 |
agatgatacccacccgatgtatttttcccacactctctggatttactcaacactctatttttcctctc |
37040789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 22 - 387
Target Start/End: Complemental strand, 15290604 - 15290243
Alignment:
| Q |
22 |
tgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaa-gagattggatcttgcagcgcagcggtagcnnnnnn |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
15290604 |
tgataccacttgttgggctcgacgagcttaacgcaattgtaaattaaaatttcaaaatccaaaaagagattggatcttgcagcgcagccttagcgataaa |
15290505 |
T |
|
| Q |
121 |
nn---tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatatta |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||| || |||||||||||| |||||||||| |
|
|
| T |
15290504 |
aaaaatgaacaccaatatttaacgtggaaaaccctctaataccgaggtataaaccacgggacaaactccaaaagattttccactatatttaagaatatta |
15290405 |
T |
|
| Q |
218 |
caatattctctccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacct |
317 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||||||||| ||| |||||| |||||||| |||| ||||||| |
|
|
| T |
15290404 |
caatattctctccactctct----tacacacacaagagatacaatatagtgttt-ccgtgagacccactcctattcgaatgctat--tatttcagcacct |
15290312 |
T |
|
| Q |
318 |
agaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatt |
387 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
| T |
15290311 |
agaagttatagagatgatacccacccggtgtattttt-ccacactttctggatttagtcaacactctatt |
15290243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 32 - 337
Target Start/End: Complemental strand, 12099361 - 12099060
Alignment:
| Q |
32 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnntgaacacca |
131 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || || |||| |||| | || |
|
|
| T |
12099361 |
tgttgggctcgacgagtttaacgcgagtgtaaattaaaattccaaaatccaaaagagatatgatcttgcagctcaccgatagcgataaaaatgaaaagca |
12099262 |
T |
|
| Q |
132 |
atatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
231 |
Q |
| |
|
|||||| ||||| ||||||||||||| || |||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12099261 |
atattttacgtgaaaaaccctctaatgacgaaggaaaaaccaagggacaaactccgaaaaaatttcaactatattaaagaatattacaatattctctcca |
12099162 |
T |
|
| Q |
232 |
ctctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
331 |
Q |
| |
|
|||||| ||||| ||||||| ||||||| ||||||| ||| |||||| |||| |||||| ||||| |||||| |||||||||||| |
|
|
| T |
12099161 |
ctctct----tacacgcacaagagacacaatattgtgtttctagtgagactcactcctattcaaatgatattattttataacacctaaaagttatagaga |
12099066 |
T |
|
| Q |
332 |
tgatac |
337 |
Q |
| |
|
|||||| |
|
|
| T |
12099065 |
tgatac |
12099060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 392
Target Start/End: Complemental strand, 12082227 - 12082021
Alignment:
| Q |
180 |
aaactccgaaaaatattccactatattaaagaatattacaatattctctccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgag |
279 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
12082227 |
aaactccaaaaaatattccactatattaa-gaatattacaatattttctccactctcttacacggaaa----agagatacaatatagtgtttctaatgag |
12082133 |
T |
|
| Q |
280 |
acctacttctattctaatgctattatattatagcacctagaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaac |
379 |
Q |
| |
|
|| || |||||| |||| |||||| ||||||| |||||||||||||||||| ||||| ||||| | |||||||||| | | ||||||||||| |||| |
|
|
| T |
12082132 |
actcgctcctattcaaatgttattattttatagcgcctagaagttatagagataatacctacccgatatatttttccc-ctttttctggatttacccaac |
12082034 |
T |
|
| Q |
380 |
actctatttttct |
392 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
12082033 |
actctaattttct |
12082021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 12084751 - 12084669
Alignment:
| Q |
32 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagc |
114 |
Q |
| |
|
|||||||||| ||||||||||| | || ||||||||||||| |||||||||| ||| ||||||||||| |||||| ||||||| |
|
|
| T |
12084751 |
tgttgggctcaacgagcttaacacgagggtaaattaaaatttcaaaatccaatagacattggatcttgtagcgcaacggtagc |
12084669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 2757307 - 2757418
Alignment:
| Q |
125 |
aacaccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatatt |
224 |
Q |
| |
|
||||||||||||||| || ||| |||| |||| || | |||||||||| | |||||| | ||||| |||||||||||||| || |||||| || |||| |
|
|
| T |
2757307 |
aacaccaatatttaatatgaaaacccctttaatgcttaaggaaaaaccatgagacaaattttgaaaa-tattccactatatttaaaaatattgcactatt |
2757405 |
T |
|
| Q |
225 |
ctctccactctct |
237 |
Q |
| |
|
||||||||||||| |
|
|
| T |
2757406 |
ctctccactctct |
2757418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 2757209 - 2757273
Alignment:
| Q |
28 |
cacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattg |
92 |
Q |
| |
|
||||||||| | || ||||||||| ||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
2757209 |
cacttgttgtgttcaacgagcttattacaagtgtaaattaaaattccaaaattcaaaagaaattg |
2757273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 32 - 382
Target Start/End: Original strand, 29106878 - 29107224
Alignment:
| Q |
32 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnntgaacacca |
131 |
Q |
| |
|
||||||| |||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
29106878 |
tgttgggatcgaggagcttaatgcaagtgtaaattaaaattccaaaatccaaaaaagattggatcttgcagcgcagcggtagcgttaaaaatgaacacca |
29106977 |
T |
|
| Q |
132 |
atatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
231 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29106978 |
atatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
29107077 |
T |
|
| Q |
232 |
ctctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
331 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| |
|
|
| T |
29107078 |
ctctct----tacacacacaagagatacaa-atagtgtttcccgtgagacctacttctattctaatgctattattttttagcacctagaagttataaaga |
29107172 |
T |
|
| Q |
332 |
tgata-cccacccggtgtatttttcccacactctctggatttactcaacact |
382 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29107173 |
tgataccccacccaatgtatttttcccacactctctggatttactcaacact |
29107224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 31 - 390
Target Start/End: Original strand, 42910992 - 42911346
Alignment:
| Q |
31 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnntgaacacc |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| | | |||||||| |
|
|
| T |
42910992 |
ttgttgggctcgacgagcttaacgcaagtggaaattaaaattttaaaatccaaaagagattagatcttgcagcgcagcggcaacgataaaaatgaacacc |
42911091 |
T |
|
| Q |
131 |
aatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcc |
230 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
42911092 |
aatatttaacatggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaa-tattccactatatttaagaatattacaatattctctcc |
42911190 |
T |
|
| Q |
231 |
actctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagag |
330 |
Q |
| |
|
||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
42911191 |
actctctcacacacaca----aaagatacaatatagtgtttcccttgagacctacttctattctaatgctattattttatagcaccaagaagttatagag |
42911286 |
T |
|
| Q |
331 |
atgatacccacccggtgtatttttcccacactctctggatttactcaacactctattttt |
390 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
42911287 |
atgatacccacccagtgtattttttccacactctctggatttactcaacactctattttt |
42911346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 38994689 - 38994779
Alignment:
| Q |
22 |
tgataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggta |
112 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| || |||||||||||||||||||||| ||||| | |||||||||||||| ||||||||| |
|
|
| T |
38994689 |
tgataccacttgttgggcttgacgatcttaatgctagtgtaaattaaaattccaaaacccaaacaaaattggatcttgcagtgcagcggta |
38994779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 214
Target Start/End: Original strand, 38997230 - 38997320
Alignment:
| Q |
124 |
gaacaccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaata |
214 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||| || ||||||| |||||||||||||| ||||||| |||| |||||||||||||| |
|
|
| T |
38997230 |
gaacagcaatattttacgtcgaaaaccctctaatatcgaacgaaaaactacgggacaaactccaaaaaataatccattatattaaagaata |
38997320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 38997130 - 38997193
Alignment:
| Q |
24 |
ataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaaga |
87 |
Q |
| |
|
|||| |||||||||| |||| | |||||| || |||||||||||||||||| ||||||||||| |
|
|
| T |
38997130 |
atactacttgttgggttcgaagggcttaatgcgggtgtaaattaaaattccagaatccaaaaga |
38997193 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 181; Significance: 1e-97; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 31 - 396
Target Start/End: Complemental strand, 8539549 - 8539185
Alignment:
| Q |
31 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnn-tgaacac |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
8539549 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaattctaaaagagattggatcttgcagcgcagcggtaacaataaaaaatgaacat |
8539450 |
T |
|
| Q |
130 |
caatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
8539449 |
caatatttaacgtggaaaaccctctaataccgagggaaaaatcacgggacaaactccgaaagatattccactatatttaagaatattacaatattatctc |
8539350 |
T |
|
| Q |
230 |
cactctctnnnnnnnnnnnnnnagagatacaa---tatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttat |
326 |
Q |
| |
|
|||||||| |||||||||| |||||||||| |||||||||| ||| |||||| | ||||||||| ||| |||||||| ||||||| |
|
|
| T |
8539349 |
cactctct----tacacacacaagagatacaatattatagtgttt-ccgtgagacccactcctattcgattgctattattttacagcacctaaaagttat |
8539255 |
T |
|
| Q |
327 |
agagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctc |
396 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||||||| ||||||| |||||| |||||||| |||| |
|
|
| T |
8539254 |
agagatgatacccatccgatgtatttttcccacactctctgaatttactgaacactatatttttcctctc |
8539185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 99; Significance: 9e-49; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 253 - 391
Target Start/End: Complemental strand, 51302306 - 51302168
Alignment:
| Q |
253 |
gagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgatacccacccggtgtattt |
352 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||||| ||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
51302306 |
gagatacaatatagtgtttcccgtgagacccactcctattcgaatgcaattgttttatagcacctagaagttatagagatgattcccacccggtgtattt |
51302207 |
T |
|
| Q |
353 |
ttcccacactctctggatttactcaacactctatttttc |
391 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
51302206 |
tatccacactctctggatttactcaatactctatttttc |
51302168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 51303028 - 51302937
Alignment:
| Q |
23 |
gataccacttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagc |
114 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
51303028 |
gataccacttgttgggatcgacgagcttaatgcaagtgtaaattaaaatttcaaaatccaaaacagattggatcttgcagcgcagcggtagc |
51302937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 51302344 - 51302308
Alignment:
| Q |
123 |
tgaacaccaatatttaacgtggaaaaccctctaatac |
159 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51302344 |
tgaacaccaatatttaacgtggaaaaccctctaatac |
51302308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 32 - 214
Target Start/End: Original strand, 2100199 - 2100379
Alignment:
| Q |
32 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattgga-tcttgcagcgcagcggtagcnnnnnnnntgaacacc |
130 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||| || | ||||||| || || || |||||| | |
|
|
| T |
2100199 |
tgttgggctcgacgagcttaacacaagtgtaaattaaaattccaaaattcataagagatttgaattttgcagcacaacgataatgataaaattgaacatc |
2100298 |
T |
|
| Q |
131 |
aatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaata |
214 |
Q |
| |
|
||||||||| |||||||||||| ||||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2100299 |
aatatttaaggtggaaaaccctttaataatgagcgaaaaac---ggggcaaactccgaaaaatattccactatattaaagaata |
2100379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 237
Target Start/End: Original strand, 2100723 - 2100753
Alignment:
| Q |
207 |
aaagaatattacaatattctctccactctct |
237 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
2100723 |
aaagaatattacaatattctctccactctct |
2100753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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