View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12865_high_15 (Length: 312)
Name: NF12865_high_15
Description: NF12865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12865_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 15 - 294
Target Start/End: Complemental strand, 19172469 - 19172190
Alignment:
| Q |
15 |
cacagacccttctcaaatcctcaaccaagactggcataactccttagaaaagcctcttctttggatctctgacctccatcctttcatcttcaccaatctt |
114 |
Q |
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| T |
19172469 |
cacagacccttctcaaatcctcaaccaagactggcataactccttagaaaagcctcttctttggatctctgacctccatcctttcatcttcaccaatctt |
19172370 |
T |
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| Q |
115 |
gctcgttcttttcttgacgacgaagacaatgaaaccgaaaccaatgataattcatcggtttcaatgtcttctgatcgtccatggcaaatagccatggcat |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
19172369 |
gctcgttcttttcttgacgacgaagacaatgaaaccgaaaccaatgataattcatcggtttcaatgtcttctgatcgtccatggcaaatagccatggcgt |
19172270 |
T |
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| Q |
215 |
ggaggaatccatcagaaaccctaagaacacgtatggaacaaatagagtgcggtttgaagtccatcgttccaacacttaac |
294 |
Q |
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| T |
19172269 |
ggaggaatccatcagaaaccctaataacacgtatggagcaaatagagtgcggtttgaagtccatcgttccaacgcttaac |
19172190 |
T |
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