View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12865_high_23 (Length: 249)

Name: NF12865_high_23
Description: NF12865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12865_high_23
NF12865_high_23
[»] chr6 (49 HSPs)
chr6 (53-190)||(22502777-22502914)
chr6 (50-190)||(21836316-21836456)
chr6 (53-190)||(31407164-31407301)
chr6 (48-177)||(6517501-6517629)
chr6 (50-190)||(22503060-22503200)
chr6 (51-182)||(7905244-7905375)
chr6 (53-190)||(7160807-7160944)
chr6 (50-177)||(7161103-7161230)
chr6 (53-190)||(21836035-21836170)
chr6 (50-177)||(32593490-32593617)
chr6 (53-190)||(7905529-7905666)
chr6 (48-177)||(31406876-31407005)
chr6 (53-161)||(15913551-15913659)
chr6 (50-190)||(15913834-15913974)
chr6 (50-199)||(21627992-21628141)
chr6 (50-151)||(10781147-10781248)
chr6 (53-177)||(12065223-12065347)
chr6 (78-199)||(11392866-11392987)
chr6 (69-190)||(8089462-8089583)
chr6 (50-199)||(14196615-14196764)
chr6 (73-162)||(30337472-30337561)
chr6 (59-199)||(33517543-33517683)
chr6 (59-120)||(28498383-28498444)
chr6 (64-199)||(12080650-12080785)
chr6 (51-159)||(14196903-14197011)
chr6 (53-163)||(25485956-25486066)
chr6 (73-199)||(30337697-30337823)
chr6 (84-177)||(10781457-10781550)
chr6 (73-162)||(30725783-30725871)
chr6 (50-199)||(33517813-33517962)
chr6 (59-162)||(3059266-3059369)
chr6 (57-199)||(28000392-28000534)
chr6 (59-117)||(29810797-29810855)
chr6 (50-196)||(30726041-30726187)
chr6 (69-162)||(26463198-26463291)
chr6 (48-120)||(363157-363229)
chr6 (59-162)||(15116548-15116651)
chr6 (75-154)||(17734487-17734566)
chr6 (59-162)||(30803870-30803973)
chr6 (73-199)||(17734219-17734345)
chr6 (141-199)||(21627804-21627862)
chr6 (141-199)||(30804140-30804198)
chr6 (106-199)||(33647019-33647112)
chr6 (50-199)||(362870-363019)
chr6 (50-162)||(25486211-25486323)
chr6 (50-162)||(28000670-28000782)
chr6 (50-120)||(22373015-22373085)
chr6 (62-199)||(24210543-24210680)
chr6 (73-154)||(8090251-8090332)
[»] chr4 (110 HSPs)
chr4 (50-190)||(54858560-54858700)
chr4 (50-185)||(3032582-3032717)
chr4 (48-186)||(10408179-10408317)
chr4 (50-190)||(27068910-27069050)
chr4 (50-177)||(54858859-54858986)
chr4 (49-177)||(10407888-10408016)
chr4 (50-190)||(27069196-27069336)
chr4 (52-177)||(45463075-45463200)
chr4 (50-190)||(22987137-22987277)
chr4 (50-190)||(52573228-52573368)
chr4 (50-177)||(51859705-51859832)
chr4 (53-190)||(22717942-22718079)
chr4 (50-174)||(27149298-27149421)
chr4 (48-177)||(5818074-5818203)
chr4 (53-190)||(39701195-39701332)
chr4 (53-177)||(11523952-11524076)
chr4 (50-190)||(27891584-27891724)
chr4 (50-190)||(52573514-52573654)
chr4 (50-177)||(50504124-50504251)
chr4 (50-199)||(14801736-14801885)
chr4 (53-190)||(45463359-45463496)
chr4 (50-190)||(50503825-50503965)
chr4 (50-162)||(50751814-50751925)
chr4 (50-196)||(16605602-16605748)
chr4 (53-190)||(39667062-39667199)
chr4 (53-161)||(50750890-50750998)
chr4 (50-199)||(9400519-9400668)
chr4 (59-199)||(15507952-15508091)
chr4 (61-190)||(22923149-22923278)
chr4 (61-190)||(22927802-22927931)
chr4 (61-190)||(22984081-22984210)
chr4 (61-190)||(22997669-22997798)
chr4 (73-201)||(34765657-34765785)
chr4 (73-161)||(37248259-37248347)
chr4 (53-177)||(39700912-39701036)
chr4 (73-199)||(52909276-52909402)
chr4 (93-190)||(9731498-9731595)
chr4 (61-190)||(22718225-22718354)
chr4 (61-190)||(22986862-22986991)
chr4 (73-162)||(24711134-24711223)
chr4 (73-162)||(50418953-50419042)
chr4 (74-162)||(24411382-24411470)
chr4 (48-199)||(4982724-4982875)
chr4 (73-160)||(35508558-35508645)
chr4 (75-161)||(18831374-18831460)
chr4 (50-199)||(35028277-35028426)
chr4 (49-162)||(4983011-4983124)
chr4 (73-154)||(5368970-5369051)
chr4 (73-162)||(7451857-7451946)
chr4 (73-162)||(23613332-23613421)
chr4 (73-162)||(44967354-44967443)
chr4 (73-162)||(49879492-49879581)
chr4 (76-161)||(54087012-54087097)
chr4 (50-162)||(27934532-27934644)
chr4 (59-199)||(30642425-30642565)
chr4 (59-163)||(32062598-32062702)
chr4 (1-49)||(41943066-41943114)
chr4 (50-162)||(51692553-51692665)
chr4 (64-199)||(53701826-53701961)
chr4 (50-161)||(11448046-11448157)
chr4 (76-162)||(16005864-16005950)
chr4 (74-199)||(37976432-37976557)
chr4 (73-162)||(13058060-13058149)
chr4 (50-119)||(22567114-22567183)
chr4 (50-199)||(38012418-38012567)
chr4 (69-162)||(55867430-55867523)
chr4 (1-49)||(3295353-3295401)
chr4 (59-162)||(11446279-11446382)
chr4 (57-199)||(9144773-9144915)
chr4 (52-154)||(9400812-9400914)
chr4 (73-199)||(33247297-33247422)
chr4 (52-163)||(39666772-39666889)
chr4 (4-49)||(10336132-10336177)
chr4 (50-199)||(34837074-34837223)
chr4 (50-199)||(42738031-42738180)
chr4 (59-199)||(35028007-35028147)
chr4 (50-162)||(42738316-42738428)
chr4 (114-186)||(51859471-51859543)
chr4 (59-162)||(41582456-41582559)
chr4 (141-199)||(8439503-8439561)
chr4 (88-162)||(36009129-36009203)
chr4 (76-162)||(43155812-43155898)
chr4 (73-199)||(44967092-44967218)
chr4 (141-199)||(46661193-46661251)
chr4 (73-199)||(50418691-50418817)
chr4 (50-120)||(51203609-51203679)
chr4 (50-199)||(53129785-53129934)
chr4 (75-199)||(17356201-17356325)
chr4 (58-119)||(27934846-27934907)
chr4 (59-120)||(40387476-40387537)
chr4 (59-120)||(40388464-40388525)
chr4 (50-162)||(9145051-9145163)
chr4 (59-162)||(30641529-30641630)
chr4 (75-154)||(6237144-6237223)
chr4 (48-199)||(7452082-7452233)
chr4 (59-154)||(10203630-10203725)
chr4 (59-154)||(32063660-32063755)
chr4 (50-161)||(32950142-32950253)
chr4 (49-120)||(38012169-38012240)
chr4 (141-199)||(13058261-13058319)
chr4 (141-199)||(17356016-17356074)
chr4 (50-120)||(32950469-32950539)
chr4 (50-120)||(34837401-34837471)
chr4 (59-97)||(41583612-41583650)
chr4 (50-119)||(148114-148183)
chr4 (57-154)||(6236838-6236934)
chr4 (141-198)||(14802015-14802072)
chr4 (53-154)||(33247566-33247667)
chr4 (50-199)||(39539197-39539346)
chr4 (48-97)||(55866109-55866158)
[»] chr7 (77 HSPs)
chr7 (48-177)||(42617909-42618038)
chr7 (50-177)||(25453128-25453255)
chr7 (50-177)||(43266565-43266692)
chr7 (50-190)||(27138227-27138367)
chr7 (48-177)||(10600248-10600377)
chr7 (53-190)||(25628481-25628618)
chr7 (49-190)||(32068382-32068523)
chr7 (53-190)||(42618197-42618334)
chr7 (53-177)||(32068099-32068223)
chr7 (50-190)||(43266266-43266406)
chr7 (50-177)||(32934647-32934774)
chr7 (52-177)||(25628777-25628902)
chr7 (50-190)||(23058715-23058855)
chr7 (53-177)||(32934351-32934475)
chr7 (50-177)||(33828273-33828400)
chr7 (48-190)||(22081558-22081699)
chr7 (53-190)||(28890582-28890719)
chr7 (46-177)||(22081858-22081989)
chr7 (53-177)||(46204424-46204548)
chr7 (53-190)||(25453414-25453551)
chr7 (49-177)||(23058428-23058556)
chr7 (50-199)||(32680595-32680744)
chr7 (53-190)||(39274873-39275011)
chr7 (64-199)||(10935808-10935943)
chr7 (59-162)||(13044681-13044784)
chr7 (59-190)||(32688506-32688637)
chr7 (73-199)||(42731442-42731568)
chr7 (50-199)||(28469287-28469436)
chr7 (49-126)||(10600025-10600102)
chr7 (53-177)||(46205608-46205732)
chr7 (50-199)||(27396874-27397023)
chr7 (73-162)||(6253494-6253583)
chr7 (73-154)||(6571036-6571117)
chr7 (73-162)||(17102043-17102132)
chr7 (73-162)||(32299021-32299110)
chr7 (59-199)||(40379778-40379918)
chr7 (62-162)||(18855970-18856070)
chr7 (50-162)||(32680880-32680992)
chr7 (73-154)||(22871601-22871682)
chr7 (73-162)||(23181310-23181399)
chr7 (59-162)||(13050096-13050200)
chr7 (50-189)||(45010893-45011032)
chr7 (48-163)||(42362448-42362563)
chr7 (84-162)||(43124468-43124546)
chr7 (73-154)||(16803969-16804050)
chr7 (73-162)||(27991762-27991851)
chr7 (1-49)||(10530189-10530237)
chr7 (1-49)||(13167942-13167990)
chr7 (59-162)||(24388828-24388931)
chr7 (76-154)||(19204515-19204593)
chr7 (76-161)||(2640495-2640580)
chr7 (50-199)||(34928650-34928799)
chr7 (59-199)||(37656861-37657001)
chr7 (50-162)||(5457223-5457335)
chr7 (1-49)||(9745182-9745230)
chr7 (59-199)||(22828097-22828237)
chr7 (50-162)||(30948445-30948557)
chr7 (100-199)||(45010648-45010747)
chr7 (1-36)||(29587633-29587668)
chr7 (73-199)||(27991987-27992113)
chr7 (50-120)||(34928977-34929047)
chr7 (50-120)||(39686861-39686931)
chr7 (59-161)||(42019914-42020016)
chr7 (1-38)||(46002803-46002840)
chr7 (73-197)||(17102270-17102394)
chr7 (59-119)||(18087697-18087757)
chr7 (141-196)||(2640269-2640324)
chr7 (48-199)||(30948158-30948309)
chr7 (141-196)||(42731701-42731756)
chr7 (141-199)||(22871399-22871457)
chr7 (49-119)||(43123174-43123244)
chr7 (59-120)||(10092226-10092287)
chr7 (75-199)||(32053422-32053546)
chr7 (59-160)||(32687406-32687507)
chr7 (59-119)||(18855419-18855479)
chr7 (50-154)||(20426654-20426758)
chr7 (106-154)||(48789127-48789175)
[»] chr2 (66 HSPs)
chr2 (50-190)||(8710754-8710894)
chr2 (48-177)||(28226043-28226172)
chr2 (50-177)||(15604339-15604466)
chr2 (53-190)||(15604625-15604762)
chr2 (50-162)||(6573543-6573655)
chr2 (51-190)||(11830365-11830504)
chr2 (53-162)||(6573050-6573158)
chr2 (53-190)||(8342465-8342602)
chr2 (53-177)||(8342190-8342314)
chr2 (51-190)||(41588344-41588483)
chr2 (49-162)||(25892393-25892506)
chr2 (50-190)||(41587235-41587374)
chr2 (50-199)||(36382161-36382310)
chr2 (59-199)||(15848097-15848237)
chr2 (64-199)||(44714040-44714175)
chr2 (59-190)||(39936535-39936665)
chr2 (73-162)||(16099078-16099167)
chr2 (50-153)||(34447813-34447916)
chr2 (50-199)||(1695740-1695889)
chr2 (59-164)||(6589673-6589778)
chr2 (59-199)||(10712732-10712872)
chr2 (73-162)||(11163339-11163428)
chr2 (50-162)||(14900768-14900878)
chr2 (59-162)||(202672-202775)
chr2 (73-199)||(36479741-36479867)
chr2 (106-160)||(25893536-25893590)
chr2 (106-199)||(37895626-37895719)
chr2 (59-157)||(43741997-43742095)
chr2 (59-199)||(2318168-2318307)
chr2 (50-199)||(13995673-13995822)
chr2 (88-161)||(22051310-22051383)
chr2 (1-49)||(27977199-27977247)
chr2 (1-49)||(28063727-28063775)
chr2 (88-199)||(39423553-39423664)
chr2 (48-163)||(30729619-30729734)
chr2 (59-117)||(28228679-28228737)
chr2 (76-162)||(39498336-39498422)
chr2 (73-162)||(6657901-6657990)
chr2 (50-119)||(14900496-14900565)
chr2 (59-160)||(28230057-28230158)
chr2 (50-199)||(33062050-33062199)
chr2 (73-154)||(45556135-45556216)
chr2 (50-162)||(33739703-33739815)
chr2 (88-199)||(36755131-36755242)
chr2 (50-177)||(36755389-36755516)
chr2 (59-154)||(39935465-39935559)
chr2 (50-120)||(13996000-13996070)
chr2 (141-199)||(15848367-15848425)
chr2 (50-120)||(33062377-33062447)
chr2 (141-199)||(34448074-34448132)
chr2 (61-162)||(3653396-3653496)
chr2 (81-162)||(6577593-6577674)
chr2 (64-197)||(13692501-13692634)
chr2 (69-162)||(25231164-25231257)
chr2 (50-199)||(37895347-37895496)
chr2 (59-119)||(199030-199090)
chr2 (59-163)||(6588692-6588796)
chr2 (141-199)||(6658126-6658184)
chr2 (141-199)||(10713002-10713060)
chr2 (141-199)||(11163145-11163203)
chr2 (141-199)||(16099303-16099361)
chr2 (50-120)||(33740030-33740100)
chr2 (50-120)||(41248886-41248956)
chr2 (50-163)||(3555250-3555363)
chr2 (1-46)||(29046612-29046657)
chr2 (144-196)||(22051088-22051140)
[»] scaffold0006 (2 HSPs)
scaffold0006 (50-190)||(222075-222215)
scaffold0006 (53-190)||(221794-221929)
[»] chr8 (76 HSPs)
chr8 (50-190)||(35634385-35634525)
chr8 (53-190)||(37542227-37542364)
chr8 (50-190)||(15230217-15230357)
chr8 (53-190)||(10445621-10445758)
chr8 (48-177)||(15229929-15230058)
chr8 (52-190)||(8997975-8998113)
chr8 (50-163)||(7983428-7983541)
chr8 (49-190)||(44664507-44664648)
chr8 (52-177)||(44664807-44664932)
chr8 (50-190)||(41353859-41353999)
chr8 (53-176)||(25124566-25124689)
chr8 (53-190)||(6471693-6471830)
chr8 (53-190)||(42945400-42945537)
chr8 (50-177)||(234039-234166)
chr8 (50-177)||(710450-710577)
chr8 (50-177)||(747662-747789)
chr8 (50-177)||(871557-871684)
chr8 (50-190)||(25124849-25124989)
chr8 (47-140)||(8997853-8997946)
chr8 (53-161)||(41353577-41353685)
chr8 (50-199)||(39071676-39071825)
chr8 (50-199)||(11674942-11675091)
chr8 (52-161)||(21432695-21432804)
chr8 (48-199)||(16388805-16388956)
chr8 (73-162)||(8316904-8316993)
chr8 (50-163)||(40318279-40318392)
chr8 (50-162)||(4994973-4995084)
chr8 (50-197)||(13186060-13186207)
chr8 (53-177)||(37542524-37542648)
chr8 (75-199)||(36928501-36928625)
chr8 (94-190)||(42945158-42945254)
chr8 (73-199)||(35756606-35756731)
chr8 (76-162)||(23698560-23698646)
chr8 (88-177)||(6471989-6472078)
chr8 (50-163)||(23505052-23505165)
chr8 (73-162)||(23663830-23663919)
chr8 (53-134)||(38003748-38003829)
chr8 (59-162)||(2535866-2535969)
chr8 (48-195)||(8746322-8746469)
chr8 (82-177)||(38003487-38003582)
chr8 (83-186)||(39474579-39474681)
chr8 (53-199)||(36325482-36325628)
chr8 (50-187)||(11674695-11674831)
chr8 (59-124)||(11763030-11763095)
chr8 (73-162)||(12273169-12273258)
chr8 (50-163)||(23507740-23507853)
chr8 (53-154)||(27500092-27500193)
chr8 (64-199)||(31608792-31608927)
chr8 (49-96)||(6472395-6472442)
chr8 (48-157)||(42803539-42803648)
chr8 (1-49)||(9818226-9818274)
chr8 (1-49)||(21231897-21231945)
chr8 (106-162)||(36186383-36186439)
chr8 (1-49)||(42077520-42077568)
chr8 (48-162)||(2534693-2534807)
chr8 (88-154)||(22915682-22915748)
chr8 (48-162)||(40775935-40776049)
chr8 (73-190)||(34061616-34061733)
chr8 (93-177)||(21432992-21433076)
chr8 (50-162)||(36325234-36325346)
chr8 (50-162)||(38845584-38845696)
chr8 (104-199)||(8747543-8747638)
chr8 (59-134)||(10749852-10749927)
chr8 (88-162)||(1425338-1425411)
chr8 (50-120)||(2266819-2266889)
chr8 (141-199)||(23663636-23663694)
chr8 (141-199)||(36928755-36928813)
chr8 (88-154)||(38955741-38955807)
chr8 (57-199)||(44406864-44407006)
chr8 (62-121)||(27500433-27500492)
chr8 (48-119)||(44407185-44407256)
chr8 (50-120)||(2266492-2266562)
chr8 (49-162)||(4405976-4406089)
chr8 (59-132)||(31873245-31873318)
chr8 (50-154)||(34060489-34060593)
chr8 (106-162)||(38862674-38862730)
[»] chr3 (77 HSPs)
chr3 (49-177)||(10294566-10294694)
chr3 (50-190)||(3469200-3469340)
chr3 (50-190)||(32306424-32306564)
chr3 (50-190)||(37778559-37778699)
chr3 (50-190)||(40788706-40788846)
chr3 (54-190)||(29118824-29118960)
chr3 (50-177)||(13948780-13948907)
chr3 (52-190)||(29685943-29686081)
chr3 (53-190)||(52032141-52032278)
chr3 (53-177)||(32306723-32306847)
chr3 (50-190)||(52032425-52032565)
chr3 (50-177)||(3469499-3469626)
chr3 (52-177)||(11910701-11910826)
chr3 (50-186)||(47551493-47551629)
chr3 (64-190)||(35643865-35643991)
chr3 (52-177)||(29686239-29686364)
chr3 (53-177)||(3596112-3596236)
chr3 (53-196)||(33156276-33156419)
chr3 (53-190)||(41421975-41422112)
chr3 (50-162)||(4322592-4322703)
chr3 (50-174)||(33506252-33506376)
chr3 (50-190)||(10294845-10294985)
chr3 (50-199)||(36314298-36314447)
chr3 (53-161)||(4323519-4323627)
chr3 (53-161)||(40788423-40788531)
chr3 (73-162)||(2796202-2796291)
chr3 (49-162)||(9294274-9294387)
chr3 (52-140)||(29118529-29118617)
chr3 (53-177)||(43998148-43998272)
chr3 (86-177)||(10307674-10307765)
chr3 (53-199)||(10770493-10770639)
chr3 (48-162)||(33154875-33154989)
chr3 (59-177)||(47856396-47856514)
chr3 (50-199)||(48322377-48322526)
chr3 (73-161)||(19741209-19741297)
chr3 (48-163)||(42855620-42855735)
chr3 (88-161)||(43384321-43384394)
chr3 (48-100)||(13949071-13949123)
chr3 (59-195)||(21185978-21186114)
chr3 (52-116)||(33506180-33506244)
chr3 (73-196)||(33689661-33689784)
chr3 (59-162)||(6956257-6956360)
chr3 (50-199)||(23458258-23458407)
chr3 (48-162)||(36314583-36314697)
chr3 (73-190)||(51994174-51994291)
chr3 (48-199)||(40758145-40758293)
chr3 (50-162)||(42342791-42342903)
chr3 (50-162)||(48322662-48322774)
chr3 (59-162)||(1079537-1079640)
chr3 (53-162)||(10770776-10770885)
chr3 (1-49)||(15990218-15990266)
chr3 (50-162)||(25107213-25107325)
chr3 (50-154)||(40033780-40033884)
chr3 (59-119)||(43607789-43607849)
chr3 (59-118)||(23276343-23276402)
chr3 (59-162)||(32431508-32431611)
chr3 (114-199)||(26463877-26463962)
chr3 (73-154)||(46474838-46474919)
chr3 (50-162)||(8041616-8041728)
chr3 (59-199)||(23457988-23458128)
chr3 (59-162)||(1078546-1078648)
chr3 (59-161)||(40506104-40506207)
chr3 (59-190)||(47857533-47857664)
chr3 (59-160)||(9368619-9368720)
chr3 (59-120)||(25108453-25108514)
chr3 (63-118)||(3596432-3596486)
chr3 (141-196)||(46475063-46475118)
chr3 (48-199)||(54466671-54466822)
chr3 (59-125)||(26479079-26479145)
chr3 (1-43)||(52641386-52641428)
chr3 (141-199)||(55052370-55052428)
chr3 (88-162)||(55052564-55052638)
chr3 (136-177)||(29118624-29118665)
chr3 (73-162)||(53756767-53756856)
chr3 (1-49)||(29453706-29453753)
chr3 (59-127)||(36150536-36150604)
chr3 (59-119)||(41558241-41558301)
[»] chr1 (87 HSPs)
chr1 (50-190)||(49955633-49955773)
chr1 (50-190)||(40714444-40714584)
chr1 (46-186)||(49955343-49955483)
chr1 (50-177)||(40714742-40714869)
chr1 (53-177)||(35040913-35041037)
chr1 (50-177)||(20760804-20760931)
chr1 (50-177)||(37929418-37929545)
chr1 (49-161)||(17188953-17189065)
chr1 (50-190)||(45750128-45750268)
chr1 (50-177)||(31050950-31051077)
chr1 (50-177)||(45749842-45749969)
chr1 (50-156)||(17189171-17189277)
chr1 (50-190)||(8898517-8898657)
chr1 (50-177)||(8898816-8898943)
chr1 (50-177)||(12905958-12906085)
chr1 (50-190)||(28324805-28324944)
chr1 (50-199)||(7820954-7821103)
chr1 (50-159)||(30326496-30326605)
chr1 (50-163)||(32558420-32558533)
chr1 (50-190)||(31058343-31058483)
chr1 (48-199)||(6367560-6367711)
chr1 (50-177)||(28325103-28325229)
chr1 (48-196)||(34464447-34464595)
chr1 (52-154)||(44523460-44523562)
chr1 (53-190)||(7371293-7371430)
chr1 (50-199)||(24905167-24905316)
chr1 (50-199)||(28011616-28011765)
chr1 (50-113)||(25885356-25885419)
chr1 (59-199)||(13914346-13914486)
chr1 (53-190)||(35038458-35038595)
chr1 (49-162)||(40772506-40772619)
chr1 (76-161)||(46163056-46163141)
chr1 (50-162)||(23209643-23209755)
chr1 (50-161)||(36694565-36694676)
chr1 (50-161)||(36710666-36710777)
chr1 (50-199)||(17662129-17662278)
chr1 (73-162)||(26024446-26024535)
chr1 (73-154)||(41098756-41098837)
chr1 (64-199)||(24009820-24009955)
chr1 (73-199)||(32917283-32917409)
chr1 (73-199)||(40210649-40210775)
chr1 (50-199)||(37578471-37578620)
chr1 (73-162)||(14878994-14879083)
chr1 (1-49)||(31654623-31654671)
chr1 (59-198)||(42248482-42248621)
chr1 (73-199)||(1841482-1841608)
chr1 (73-199)||(4960563-4960689)
chr1 (50-116)||(7371529-7371595)
chr1 (50-199)||(34464728-34464877)
chr1 (73-162)||(25647907-25647996)
chr1 (106-162)||(1103517-1103573)
chr1 (50-154)||(35152343-35152447)
chr1 (1-49)||(51443574-51443622)
chr1 (64-199)||(13914082-13914217)
chr1 (50-157)||(44522147-44522254)
chr1 (106-199)||(43758878-43758971)
chr1 (50-199)||(6367841-6367990)
chr1 (49-162)||(30711326-30711439)
chr1 (59-162)||(17691228-17691331)
chr1 (59-190)||(32132313-32132444)
chr1 (88-162)||(183507-183581)
chr1 (141-199)||(1841738-1841796)
chr1 (88-154)||(19017953-19018019)
chr1 (73-199)||(26024671-26024797)
chr1 (49-199)||(33442593-33442743)
chr1 (52-162)||(33442879-33442989)
chr1 (76-154)||(47999416-47999494)
chr1 (50-199)||(30711606-30711755)
chr1 (50-199)||(52134316-52134465)
chr1 (75-199)||(183246-183370)
chr1 (50-154)||(5734010-5734113)
chr1 (50-94)||(25884701-25884745)
chr1 (73-177)||(35473654-35473758)
chr1 (59-199)||(49723005-49723145)
chr1 (50-162)||(52134068-52134180)
chr1 (141-196)||(14879253-14879308)
chr1 (59-162)||(17692501-17692604)
chr1 (141-196)||(48779401-48779456)
chr1 (141-199)||(1103740-1103798)
chr1 (57-123)||(4716475-4716541)
chr1 (48-162)||(31514602-31514716)
chr1 (48-162)||(34849009-34849123)
chr1 (141-199)||(40210461-40210519)
chr1 (77-162)||(28011390-28011475)
chr1 (48-97)||(31197063-31197112)
chr1 (59-163)||(32133238-32133343)
chr1 (59-127)||(42267312-42267380)
[»] scaffold0328 (2 HSPs)
scaffold0328 (50-190)||(11426-11566)
scaffold0328 (53-190)||(11143-11280)
[»] scaffold0771 (2 HSPs)
scaffold0771 (50-177)||(920-1047)
scaffold0771 (48-100)||(1211-1263)
[»] chr5 (73 HSPs)
chr5 (48-190)||(33871337-33871479)
chr5 (49-190)||(8875448-8875589)
chr5 (48-177)||(20152779-20152908)
chr5 (50-177)||(17544347-17544474)
chr5 (50-190)||(20153204-20153341)
chr5 (50-190)||(33871624-33871764)
chr5 (50-151)||(3656743-3656844)
chr5 (48-190)||(21287943-21288085)
chr5 (59-199)||(5024297-5024437)
chr5 (73-162)||(24547441-24547530)
chr5 (73-177)||(22298565-22298669)
chr5 (50-199)||(5993889-5994038)
chr5 (64-162)||(38475315-38475413)
chr5 (59-199)||(35512157-35512297)
chr5 (73-162)||(38442091-38442180)
chr5 (50-154)||(16157179-16157283)
chr5 (59-162)||(39453309-39453412)
chr5 (79-177)||(17544077-17544175)
chr5 (56-125)||(8875618-8875687)
chr5 (73-162)||(11761772-11761861)
chr5 (73-154)||(13362552-13362633)
chr5 (41-162)||(28771154-28771275)
chr5 (75-186)||(16083002-16083113)
chr5 (75-199)||(17202424-17202548)
chr5 (74-162)||(35920500-35920588)
chr5 (59-154)||(24141461-24141556)
chr5 (100-190)||(21287793-21287883)
chr5 (48-162)||(27587146-27587260)
chr5 (53-199)||(41930764-41930910)
chr5 (73-162)||(13962887-13962976)
chr5 (59-199)||(19892587-19892727)
chr5 (59-199)||(32242251-32242391)
chr5 (50-162)||(6150454-6150566)
chr5 (106-162)||(29646678-29646734)
chr5 (68-199)||(6757883-6758014)
chr5 (48-162)||(3529158-3529272)
chr5 (59-199)||(18247095-18247233)
chr5 (50-199)||(20814414-20814563)
chr5 (73-154)||(30005176-30005257)
chr5 (59-196)||(43159096-43159233)
chr5 (50-162)||(6758150-6758262)
chr5 (50-162)||(41930516-41930628)
chr5 (48-199)||(31482400-31482551)
chr5 (76-162)||(186445-186531)
chr5 (106-199)||(11047493-11047586)
chr5 (141-199)||(13362318-13362376)
chr5 (50-162)||(18670202-18670311)
chr5 (50-196)||(39453581-39453727)
chr5 (50-162)||(14194739-14194850)
chr5 (50-162)||(31482687-31482799)
chr5 (59-162)||(40148907-40149010)
chr5 (50-120)||(297014-297084)
chr5 (50-120)||(1505967-1506037)
chr5 (57-199)||(1506215-1506357)
chr5 (50-196)||(6150702-6150848)
chr5 (73-199)||(11761996-11762122)
chr5 (50-199)||(32242521-32242669)
chr5 (59-199)||(19892317-19892457)
chr5 (106-162)||(28269704-28269760)
chr5 (59-119)||(40150173-40150233)
chr5 (59-163)||(42067839-42067943)
chr5 (141-196)||(11047719-11047774)
chr5 (141-196)||(16156946-16157001)
chr5 (141-196)||(20814226-20814281)
chr5 (141-196)||(28269513-28269568)
chr5 (84-199)||(38475067-38475182)
chr5 (141-199)||(3528964-3529022)
chr5 (141-199)||(5994168-5994226)
chr5 (141-199)||(6301822-6301880)
chr5 (142-199)||(5024111-5024168)
chr5 (50-119)||(42265735-42265804)
chr5 (59-199)||(11740696-11740836)
chr5 (50-161)||(21265458-21265570)
[»] scaffold0388 (2 HSPs)
scaffold0388 (53-190)||(12525-12662)
scaffold0388 (48-161)||(12244-12351)
[»] scaffold0599 (1 HSPs)
scaffold0599 (52-177)||(2395-2520)
[»] scaffold0042 (1 HSPs)
scaffold0042 (52-190)||(12066-12204)
[»] scaffold0005 (2 HSPs)
scaffold0005 (50-199)||(37842-37991)
scaffold0005 (141-198)||(37655-37712)
[»] scaffold0031 (1 HSPs)
scaffold0031 (47-199)||(68962-69114)
[»] scaffold0020 (2 HSPs)
scaffold0020 (73-162)||(139695-139784)
scaffold0020 (141-199)||(139920-139978)
[»] scaffold0007 (1 HSPs)
scaffold0007 (73-162)||(1792-1881)
[»] scaffold0205 (2 HSPs)
scaffold0205 (50-154)||(21009-21113)
scaffold0205 (48-127)||(21289-21368)
[»] scaffold0775 (1 HSPs)
scaffold0775 (59-190)||(6266-6397)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-49)||(2551-2599)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-49)||(2081-2129)
[»] scaffold0008 (1 HSPs)
scaffold0008 (59-162)||(239867-239970)
[»] scaffold0559 (1 HSPs)
scaffold0559 (48-162)||(1231-1345)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-46)||(107914-107959)
[»] scaffold0128 (1 HSPs)
scaffold0128 (59-160)||(19866-19967)
[»] scaffold0024 (1 HSPs)
scaffold0024 (50-162)||(141879-141991)


Alignment Details
Target: chr6 (Bit Score: 102; Significance: 9e-51; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 22502777 - 22502914
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||    
T  22502777 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 22502876  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | |||||||||||||| |||| ||||    
T  22502877 aatttcgtcctttgaccaacttaataactgccaagtca 22502914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 21836456 - 21836316
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| ||||||||||||||    
T  21836456 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 21836357  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| || |||| ||||    
T  21836356 taaaatttcgtcctttgaccaacttaatcactgccaagtca 21836316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 31407301 - 31407164
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||| |||||||||||||||||    
T  31407301 ttaatgatgtgcttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 31407202  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | ||||||||||| || | |||||||    
T  31407201 aatttcgtcctttgaccaacttaatcactgtcacgtca 31407164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 6517501 - 6517629
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| ||||||  ||||| ||||||||||||    
T  6517501 ttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctggcaattt-accttgcattgtttaatca 6517599  T
Q  148 tttaaaaattcgtcctctcaccaacttaat 177  Q
    ||||||| |||||||| | |||||||||||    
T  6517600 tttaaaatttcgtcctttgaccaacttaat 6517629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 22503200 - 22503060
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||  ||||| ||||||||||||||    
T  22503200 ggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttatccttgcattgtttaatcatt 22503101  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||  |||||| | | ||||||||||| || |||||||||    
T  22503100 taaattttcgtcatttgaccaacttaatcactgccacgtca 22503060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 51 - 182
Target Start/End: Original strand, 7905244 - 7905375
Alignment:
Q  51 gcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattt 150  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||| |||||| ||| |||||||||||    
T  7905244 gcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttacccttgcattatttaatcattt 7905343  T
Q  151 aaaaattcgtcctctcaccaacttaataaccg 182  Q
    |||| |||||| | | ||||||||||| ||||    
T  7905344 aaaatttcgtcatttgaccaacttaatcaccg 7905375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 7160807 - 7160944
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||| |||||| | |||| |||||||||||||||||    
T  7160807 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgcattgtttaatcatttaa 7160906  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | ||||||||||| ||  ||||||||    
T  7160907 aatttcgtcctttgaccaacttaatcactaccacgtca 7160944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 7161230 - 7161103
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    ||||||||||| | |||||||| |||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||| ||||||||||||||    
T  7161230 ggcttaatgatatatttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcactaatcctgacaatttacccttgcattgtttaatcatt 7161131  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||| | | |||||||||||    
T  7161130 taaaatttcgtcatttgaccaacttaat 7161103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 21836035 - 21836170
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| || ||||||||||||||| |||||| |||||| |||||||||||||||||    
T  21836035 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagtc-ttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 21836133  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | | ||||||||| || |||||||||    
T  21836134 aatttcgtcctttga-caacttaatcactgccacgtca 21836170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 32593490 - 32593617
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||| |||  |||||||||    
T  32593490 ggcttaatgatgtgtttagtcctttcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcatttgttaatcatt 32593589  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||| |   |||||||||||    
T  32593590 taaaatttcgtctttggaccaacttaat 32593617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 7905666 - 7905529
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||| |||| | ||||||||||| ||| |||||| |||||| ||||||||||||||| |    
T  7905666 ttaatgatgtgtttcgtccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttacccttgcattgtttaatcatttca 7905567  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||| | | ||||||||||| || |||||||||    
T  7905566 aatttcgtcatttgaccaacttaatcactgccacgtca 7905529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 31406876 - 31407005
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||| | |||||| ||||||||  |||||  ||||| ||| ||||||||    
T  31406876 ttggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggtaatttgtccttgcattatttaatca 31406975  T
Q  148 tttaaaaattcgtcctctcaccaacttaat 177  Q
    ||||||| |||||||| | || ||||||||    
T  31406976 tttaaaatttcgtcctttgacaaacttaat 31407005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 15913551 - 15913659
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||| || |||| |||||| |||  ||||| |||||| |||||||||||||||||    
T  15913551 ttaatgatgtgtttcgttattgcaattaggcgtcatttaaaaattagtctttgtaattgctaattctggtaatttacccttgcattgtttaatcatttaa 15913650  T
Q  153 aaattcgtc 161  Q
    || ||||||    
T  15913651 aatttcgtc 15913659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 15913974 - 15913834
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||| |||| | |||||| ||||| ||  || || ||| ||||||||||||| |||    
T  15913974 ggcttaatgatgtgtttcgtccttgcaattaagggtcatttaaaaatttgtccatataatcgttaatcttggaaaattacccctgtattgtttaataatt 15913875  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| || | |||||||    
T  15913874 taaaatttcgtcctttgaccaacttaatcactgtcacgtca 15913834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 21628141 - 21627992
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| |||  ||||||||| |||| | |||||||||||||||||||||| |||||| ||||||||||||||    
T  21628141 ggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 21628042  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || || |||||| || ||||||| || ||||||||| ||||||||    
T  21628041 taaaattttgtccctctc-cccacttaatcactgccacgtcactaatttga 21627992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 151
Target Start/End: Original strand, 10781147 - 10781248
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| |  ||||| || || || |||||| |||||||||||||||||| ||    
T  10781147 ggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgcaatcgttattcgtggcaatttacccttgtattgtttaatcttt 10781246  T
Q  150 ta 151  Q
    ||    
T  10781247 ta 10781248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 12065223 - 12065347
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattg-tttaatcattta 151  Q
    ||||||||| ||||| ||  ||||||||||| |||||||||||||||| | | ||||||||||| ||| |||||| ||||||||||| ||||||||||||    
T  12065223 ttaatgatgcgtttcatctttgcaattaggcatcatttaaaaattagt-catgtaatcgctaattctggcaatttacccttgtattgttttaatcattta 12065321  T
Q  152 aaaattcgtcctctcaccaacttaat 177  Q
    ||| |||| ||| | |||||||||||    
T  12065322 aaatttcgacctttgaccaacttaat 12065347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 199
Target Start/End: Original strand, 11392866 - 11392987
Alignment:
Q  78 ttaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc-ctctcaccaacttaa 176  Q
    ||||| ||| |||||||||| |||||| |||||||||||||| | ||||| |||||| ||||||||||||||||||| ||||||  |||| |||||||||    
T  11392866 ttaggagtcgtttaaaaattggtccttgtaatcgctaatcctaataatttacccttgcattgtttaatcatttaaaatttcgtctatctc-ccaacttaa 11392964  T
Q  177 taaccgccacgtcagtaatttga 199  Q
    | || |||| |||| ||||||||    
T  11392965 tcactgccatgtcactaatttga 11392987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 8089462 - 8089583
Alignment:
Q  69 tccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcac 168  Q
    |||||||||||||| ||| |||||||||| |||| | |||||| |||||||  ||| || |||||| ||||||||||||||||||| |||||||  | ||    
T  8089462 tccctgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgcattgtttaatcatttaaaatttcgtcccttaac 8089561  T
Q  169 caacttaataaccgccacgtca 190  Q
    | ||||||| |||| |||||||    
T  8089562 ccacttaatgaccgacacgtca 8089583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 14196615 - 14196764
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||| |||| | |||| |||||| ||| ||||||  | ||| | |  |||||||||    
T  14196615 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaattctggcaatttagctttgcaattgttaatcatt 14196714  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||||||||| || | ||||||| ||||||||    
T  14196715 taaaatttggtccttggaccaacttaatcactgtcacgtcactaatttga 14196764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 30337472 - 30337561
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| |||||| |||| |||||||||||||| |||||||    
T  30337472 tgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatcatttaaaatttcgtcc 30337561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 33517543 - 33517683
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| || |||||||  || |||||||||| |||| | ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||    
T  33517543 atgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 33517642  T
Q  159 gt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    || |||||| || ||||||| || || |||||| ||||||||    
T  33517643 gtccctctc-cccacttaatcactgctacgtcactaatttga 33517683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 28498444 - 28498383
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||    
T  28498444 atgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctg 28498383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 199
Target Start/End: Original strand, 12080650 - 12080785
Alignment:
Q  64 tttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cc 162  Q
    |||| ||| |||||||||| ||| ||||||||||  ||| | |||||||||||| || |||||| ||| || ||||||||||||||||||| ||||| ||    
T  12080650 tttcatccttgcaattaggggtcgtttaaaaattgctccctgtaatcgctaatcatggcaatttacccctgcattgtttaatcatttaaaatttcgtccc 12080749  T
Q  163 tctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||| || ||||||| || |||| |||| ||||||||    
T  12080750 tctc-cccacttaatcactgccatgtcactaatttga 12080785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 51 - 159
Target Start/End: Complemental strand, 14197011 - 14196903
Alignment:
Q  51 gcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattt 150  Q
    ||||||||||||| || |||| |||||||||||||| |||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  ||||||||||    
T  14197011 gcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcattt 14196912  T
Q  151 aaaaattcg 159  Q
    |||| ||||    
T  14196911 aaaatttcg 14196903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 25485956 - 25486066
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||| || |||| |||||||| |||||||||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  ||||||||||||    
T  25485956 ttaatgatgtgattagtccttgcaattaagcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 25486055  T
Q  153 aaattcgtcct 163  Q
    || || |||||    
T  25486056 aatttggtcct 25486066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 30337823 - 30337697
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaac 172  Q
    |||||||||| |||||||||||||| |||| | ||||||||||||||  |||  |  ||||| | |  |||||||||||||| |||||||| | |||||     
T  30337823 tgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaat 30337724  T
Q  173 ttaataaccgccacgtcagtaatttga 199  Q
    ||||| || ||||||||| ||||||||    
T  30337723 ttaatcactgccacgtcactaatttga 30337697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 10781550 - 10781457
Alignment:
Q  84 gtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaat 177  Q
    |||||||||||||||| | || |||||| |||||||||||||||  ||||| |||||||||| |||||||| || || || | |||||||||||    
T  10781550 gtcatttaaaaattagccattgtaatcgttaatcctgacaatttatccttgcattgtttaattatttaaaattttgttctttgaccaacttaat 10781457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 30725783 - 30725871
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||  | ||||||||||||||| |||||| |||||| | ||||||||||||||||| |||||||    
T  30725783 tgcaattagg-gtcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcatttaaaatttcgtcc 30725871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 33517962 - 33517813
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| | || |||||||||||  |||  |  ||||| | |  |||||||||    
T  33517962 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcatt 33517863  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| |||||||| | ||||||||||| || ||||||||| ||||||||    
T  33517862 taaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttga 33517813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 3059266 - 3059369
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||| | ||| |||||||  | |||| | ||||||||||||||  |||||| |||||| ||||||||||||||||||| |||    
T  3059266 atgtatttcatccttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 3059365  T
Q  159 gtcc 162  Q
    ||||    
T  3059366 gtcc 3059369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 28000392 - 28000534
Alignment:
Q  57 tgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaat 156  Q
    |||||||||| | || |||||||||||| |||||||||||| |||| |||||| |||||||||| || |||  || || | |  |||||| ||||||| |    
T  28000392 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctttaattgctaatcctgtcattttaaccctgcaattgttaatcgtttaaaatt 28000491  T
Q  157 tcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    | |||||   ||||| ||||| || ||||||||| ||||||||    
T  28000492 tggtccttggaccaaattaatcactgccacgtcactaatttga 28000534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 29810855 - 29810797
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatc 117  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||| ||||| ||||||    
T  29810855 atgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcactaatc 29810797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 30726187 - 30726041
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| | || |||||||||||  |||  |  ||||| | |  |||||||||    
T  30726187 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatcattaatcatt 30726088  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    ||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  30726087 taaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 30726041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 26463198 - 26463291
Alignment:
Q  69 tccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||||||| ||| |||||||||| |||| | || ||| |||||||| ||| || |||||| |  |||||||||||||||| |||||||    
T  26463198 tccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtcc 26463291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 363229 - 363157
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| ||||||||||    
T  363229 ttggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 363157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 15116651 - 15116548
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||||||| |||||||||| ||| |||||||||| |||||  ||||||||||||||  |||  |  ||||| |  |||||||||||||||||||     
T  15116651 atgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatcatttaaaaattg 15116552  T
Q  159 gtcc 162  Q
    ||||    
T  15116551 gtcc 15116548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 154
Target Start/End: Complemental strand, 17734566 - 17734487
Alignment:
Q  75 caattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||| | ||| ||||||||||  ||| | ||||||||||||||  |||||| |||||| |||||||||||||||||||    
T  17734566 caattatgggtcgtttaaaaattgatccatgtaatcgctaatcctatcaatttacccttgcattgtttaatcatttaaaa 17734487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 30803870 - 30803973
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| ||||| |||| ||| ||||||||||  ||  | |||||| |||||||| |||||| |||||  ||||||||||||||||||| |||    
T  30803870 atgtatttcatccttgcaactaggtgtcgtttaaaaattgatctatgtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 30803969  T
Q  159 gtcc 162  Q
    ||||    
T  30803970 gtcc 30803973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 17734219 - 17734345
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaac 172  Q
    |||||||||| ||| |||||||||| || ||| |||| |||||||||  |||  |  ||||| | |  |||||||||||||| |||||||| | |||||     
T  17734219 tgcaattaggggtcgtttaaaaattggttcttgtaattgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaat 17734318  T
Q  173 ttaataaccgccacgtcagtaatttga 199  Q
    ||||| || ||||||||| ||||||||    
T  17734319 ttaatcactgccacgtcactaatttga 17734345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 21627804 - 21627862
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| ||||||||    
T  21627804 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttga 21627862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 30804198 - 30804140
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| ||||||||    
T  30804198 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttga 30804140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 33647019 - 33647112
Alignment:
Q  106 taatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc-ctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||| || |||||| |||||| ||| ||||||||||||||| |||||| ||||| || | ||||| || ||||||||| ||||||||    
T  33647019 taatcgctaatcttgccaatttacccttgcattatttaatcatttaaaatttcgtctctctc-cccatttaatcactgccacgtcactaatttga 33647112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 362870 - 363019
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| | |||||||| || |||  || || | |  |||||| ||    
T  362870 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatcgtt 362969  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||| ||||| || ||||||||| ||||||||    
T  362970 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 363019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 25486323 - 25486211
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    ||||||||||| || || |||| ||||| || ||||| |||||||||| |||| | |||| |||||||| | ||||||  ||||| | |  |||||||||    
T  25486323 ggcttaatgatatggttagtccttgcaactaagcgtcgtttaaaaattcgtccctgtaattgctaatcccggcaatttagccttgcaattgttaatcatt 25486224  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  25486223 taaaatttcgtcc 25486211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 28000782 - 28000670
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||| ||||| | || |||||||||||| |||||||||||| |||  | |||| |||||| ||| ||||||  ||||| | |  |||||||||    
T  28000782 ggcttattgatctgtttagcccttgcaattaggcggcatttaaaaatttgtctctgtaattgctaattctggcaatttagccttgcaattgttaatcatt 28000683  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  28000682 taaaatttcgtcc 28000670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 22373085 - 22373015
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||| ||| | || |||||||||||| |||||||||||| |||| | |||| ||||||||||    
T  22373085 ggcttattgatgttttttgcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 22373015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 199
Target Start/End: Original strand, 24210543 - 24210680
Alignment:
Q  62 tgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt- 160  Q
    ||||||||||||| ||||||| |||||||||||||| |||  | |||| | ||||| |  ||| || |||||| |  |||||||||||||||| ||| |     
T  24210543 tgtttcgtccctgtaattaggggtcatttaaaaattggtctctgtaattgttaatcatagcaaattacccttgcaaagtttaatcatttaaaatttcatc 24210642  T
Q  161 cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||| ||  | |||| |||||||||||| ||||||||    
T  24210643 cctctc-cccgcctaatcaccgccacgtcactaatttga 24210680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 8090332 - 8090251
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||| ||| |||||||||| |||||| || || ||||||||  ||| || |||||| |  ||||||||||||||||    
T  8090332 tgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatcatttaaaa 8090251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 110)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 54858560 - 54858700
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||| ||||||||||||||    
T  54858560 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 54858659  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| || |||||||||    
T  54858660 taaaatttcgtcctttgaccaacttaatcactgccacgtca 54858700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 50 - 185
Target Start/End: Original strand, 3032582 - 3032717
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||    
T  3032582 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 3032681  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgcca 185  Q
    ||||| |||||| | | ||||||||||| |||||||    
T  3032682 taaaatttcgtcatttgaccaacttaatcaccgcca 3032717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 10408317 - 10408179
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| |||||| |||||| ||||||||||||    
T  10408317 ttggcttaatgttgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 10408218  T
Q  148 tttaaaaattcgtcctctcaccaacttaataaccgccac 186  Q
    ||||||| |||||||| | ||||||||||| || |||||    
T  10408217 tttaaaatttcgtcctttgaccaacttaatcactgccac 10408179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 27068910 - 27069050
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||| ||||||||||||||    
T  27068910 ggcttaaggatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 27069009  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| || |||||||||    
T  27069010 taaaatttcgtcctttgaccaacttaatcactgccacgtca 27069050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 54858986 - 54858859
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||| |||||| |||||| ||||||||||||||    
T  54858986 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 54858887  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | |||||||||||    
T  54858886 taaaatttcgtcctttgaccaacttaat 54858859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 10407888 - 10408016
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| | |||||||||||||||||||||| |||||| |||||||||||||    
T  10407888 tggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 10407987  T
Q  149 ttaaaaattcgtcctctcaccaacttaat 177  Q
    |||||| |||||||| | | |||||||||    
T  10407988 ttaaaatttcgtcctttgatcaacttaat 10408016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 27069336 - 27069196
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| |||||||||| |||||| |||||| ||||||||||||||    
T  27069336 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 27069237  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||| | | ||||| ||||| ||||||| ||||    
T  27069236 taaaatttcgtcttttgaccaatttaatcaccgccaagtca 27069196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 45463075 - 45463200
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||| |||||| |||||| ||||||||||||||||    
T  45463075 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 45463174  T
Q  152 aaaattcgtcctctcaccaacttaat 177  Q
    ||| |||||| | | |||||||||||    
T  45463175 aaatttcgtcatttgaccaacttaat 45463200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 22987277 - 22987137
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||||||| | |||||||||||||||||||| | ||||||  |||||||||||||    
T  22987277 ggcttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcatt 22987178  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| ||| ||| ||||    
T  22987177 taaaatttcgtcctttgaccaacttaatcaccaccaagtca 22987137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 52573228 - 52573368
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| | | ||||||||||||||| |||||| | |||  ||||||||||||||    
T  52573228 ggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtacctgtaatcgctaatcctggcaatttactcttacattgtttaatcatt 52573327  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| || |||||||||    
T  52573328 taaaatttcgtcctttgaccaacttaatcactgccacgtca 52573368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 51859832 - 51859705
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||| ||| ||||||||||||||| || ||||||||||||||| ||||||  ||||||||||||||||||||    
T  51859832 ggcttaatgatgtgtttcgtccttgcaattagacgtaatttaaaaattagtctttgtaatcgctaatcctggcaatttatccttgtattgtttaatcatt 51859733  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | | |||||||||    
T  51859732 taaaatttcgtcctttgatcaacttaat 51859705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 22717942 - 22718079
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||||||| | |||||||||||||||||||| | ||||||  ||||||||||||||||    
T  22717942 ttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatcatttaa 22718041  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | ||||||||||| ||| ||| ||||    
T  22718042 aatttcgtcctttgaccaacttaatcaccaccaagtca 22718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 27149421 - 27149298
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||| | |||| |||||||||| |||||| |||||| ||||||||||||||    
T  27149421 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaa-ttagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 27149323  T
Q  150 taaaaattcgtcctctcaccaactt 174  Q
    ||||| |||||||| | ||||||||    
T  27149322 taaaatttcgtcctttgaccaactt 27149298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 5818203 - 5818074
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||| ||||||||||||||||||  || ||||||||||||||||||||||||||| | |||||| |||||||| |||||| |||||| ||||||||||||    
T  5818203 ttggtttaatgatgtgtttcgtctttgtaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttacccttgcattgtttaatca 5818104  T
Q  148 tttaaaaattcgtcctctcaccaacttaat 177  Q
    ||||||| ||| |||| | |||||||||||    
T  5818103 tttaaaatttcatcctttgaccaacttaat 5818074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 39701332 - 39701195
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  | |||||| ||||| ||||||||| || ||| |||||||||||||||||    
T  39701332 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctatgtaatcgttaatcttgacaatttacctttgcattgtttaatcatttaa 39701233  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||| | | ||||||||||| || |||| ||||    
T  39701232 aatttcgtcatttgaccaacttaatcactgccaagtca 39701195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 11523952 - 11524076
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  | |||||| |||||||| |||| | |||||| |||||||||||||||||    
T  11523952 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatatacccttgcattgtttaatcatttaa 11524051  T
Q  153 aaattcgtcctctcaccaacttaat 177  Q
    || |||||| | | |||||||||||    
T  11524052 aatttcgtcatttgaccaacttaat 11524076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 27891584 - 27891724
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||| | | |||||||||||||||| | |||||||||||  || |||||| |||||| ||||||||||||||    
T  27891584 ggcttaatgatgtgtttcgtccttgcaattagacattatttaaaaattagtccctgtaatcgctaattttggcaatttacccttgcattgtttaatcatt 27891683  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| || | |||||||    
T  27891684 taaaatttcgtcctttgaccaacttaatcactgtcacgtca 27891724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 52573654 - 52573514
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||  |||||| || ||| ||||||||||||||    
T  52573654 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctagcaatttaccattgcattgtttaatcatt 52573555  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| | |||||| | | ||| ||||| || |||||||||    
T  52573554 taaaattccgtcctttgatcaatttaatcactgccacgtca 52573514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 50504251 - 50504124
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||  | |||||| |||||| | |||||| |||||| ||||||||||||||    
T  50504251 ggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttacccttgcattgtttaatcatt 50504152  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | || ||||||||    
T  50504151 taaaatttcgtcctttgacaaacttaat 50504124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 14801736 - 14801885
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||||||    
T  14801736 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcatt 14801835  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| ||||| |||||| || ||||||| || ||||||||| ||||||||    
T  14801836 taaaatttcgtccctctc-cccacttaatcactgccacgtcactaatttga 14801885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 45463496 - 45463359
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| | |||| |||||||||| |||| | |||||| |||||||||||||||||    
T  45463496 ttaatgatatgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatctacccttgcattgtttaatcatttaa 45463397  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || || || || | ||||||||||| ||  ||||||||    
T  45463396 aattttgttctttgaccaacttaatcactaccacgtca 45463359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 50503825 - 50503965
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||| ||||| | |||||| ||||| |  |||||| |||||| ||||||||||||||    
T  50503825 ggcttaatgatgtgtttcgtcctcgcaattaggcatcatttaaaaatcagtccatgtaatcgttaatcttagcaatttacccttgcattgtttaatcatt 50503924  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| | |||||| | ||||||||||| || |||||||||    
T  50503925 taaaattccgtcctttgaccaacttaatcactgccacgtca 50503965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 50751925 - 50751814
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||| ||||| | |||||||||||||||||| ||  ||||| ||||||||||||||    
T  50751925 ggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcctgt-aatcgctaatcctgacaaattaaccttgcattgtttaatcatt 50751827  T
Q  150 taaaaattcgtcc 162  Q
    |||||||||||||    
T  50751826 taaaaattcgtcc 50751814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 16605602 - 16605748
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| | ||||||  || |||| |||||| |||||| |||| |||||||||    
T  16605602 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcattgattaatcatt 16605701  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    ||||| |||||||   | || ||||||| || ||||||||| |||||    
T  16605702 taaaatttcgtccctccccccacttaatcactgccacgtcactaatt 16605748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 39667199 - 39667062
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| || ||||| | |||||||||||||| |||| | |||||| ||||||||  || || |||||| |||||||||||||||||    
T  39667199 ttaatgatgtgtttcgtccttgtaattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcatttaa 39667100  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||| | | ||||||||||| ||||||||||||    
T  39667099 aatttcgtcttttgaccaacttaatcaccgccacgtca 39667062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 50750890 - 50750998
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    |||| ||||||||||  ||||||||||||||||| |||||||||| |||| | ||||||||||||||| ||| ||  ||||| |||||||||||||||||    
T  50750890 ttaaggatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaa 50750989  T
Q  153 aaattcgtc 161  Q
    |||||||||    
T  50750990 aaattcgtc 50750998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 9400519 - 9400668
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| |||||||||| |||||||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  |||||||||    
T  9400519 ggcttaatgatgtgattagtccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 9400618  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||||||||| || | ||||||| ||||||||    
T  9400619 taaaatttggtccttggaccaacttaatcactgtcacgtcactaatttga 9400668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 15508091 - 15507952
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| |||||||||| |||||| |||||||||||||||||||||| || ||| || |||||||||||||||| |||    
T  15508091 atgtatttcatccttgcaattaggggtcgtttaaaaatt-gtccttgtaatcgctaatcctgacaatttaccattgcatggtttaatcatttaaaatttc 15507993  T
Q  159 gtc-ctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||| ||||| || ||||||| || ||| ||||| ||||||||    
T  15507992 gtctctctc-cccacttaatcactgccgcgtcactaatttga 15507952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 190
Target Start/End: Original strand, 22923149 - 22923278
Alignment:
Q  61 gtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt 160  Q
    ||||||||||| |  |||||| |||||||||||||||||||  | |||||| ||||||||||||||| | |||| ||||||||||||||||||| |||||    
T  22923149 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgt 22923248  T
Q  161 cctctcaccaacttaataaccgccacgtca 190  Q
    | | | ||||| ||||| || | |||||||    
T  22923249 catttgaccaatttaatcactgacacgtca 22923278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 190
Target Start/End: Original strand, 22927802 - 22927931
Alignment:
Q  61 gtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt 160  Q
    ||||||||||| |  |||||| |||||||||||||||||||  | |||||| ||||||||||||||| | |||| ||||||||||||||||||| |||||    
T  22927802 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgt 22927901  T
Q  161 cctctcaccaacttaataaccgccacgtca 190  Q
    | | | ||||| ||||| || | |||||||    
T  22927902 catttgaccaatttaatcactgacacgtca 22927931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 190
Target Start/End: Original strand, 22984081 - 22984210
Alignment:
Q  61 gtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt 160  Q
    ||||||||||| |  |||||| |||||||||||||||||||  | |||||| ||||||||||||||| | |||| ||||||||||||||||||| |||||    
T  22984081 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgt 22984180  T
Q  161 cctctcaccaacttaataaccgccacgtca 190  Q
    | | | ||||| ||||| || | |||||||    
T  22984181 catttgaccaatttaatcactgacacgtca 22984210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 190
Target Start/End: Original strand, 22997669 - 22997798
Alignment:
Q  61 gtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt 160  Q
    ||||||||||| |  |||||| |||||||||||||||||||  | |||||| ||||||||||||||| | |||| ||||||||||||||||||| |||||    
T  22997669 gtgtttcgtccttttaattagacgtcatttaaaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgt 22997768  T
Q  161 cctctcaccaacttaataaccgccacgtca 190  Q
    | | | ||||| ||||| || | |||||||    
T  22997769 catttgaccaatttaatcactgacacgtca 22997798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 201
Target Start/End: Complemental strand, 34765785 - 34765657
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaa 171  Q
    |||||||||| ||| |||||||||| || | | ||||||||||||||| |||||| || ||| ||||||||||||||||||| ||||| |||||| || |    
T  34765785 tgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttcgtccctctc-ccca 34765687  T
Q  172 cttaataaccgccacgtcagtaatttgagg 201  Q
    |||||| || ||||||||| ||||||||||    
T  34765686 cttaatcactgccacgtcactaatttgagg 34765657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 37248259 - 37248347
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc 161  Q
    |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||||    
T  37248259 tgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 37248347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 39700912 - 39701036
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    |||||| |||||||| | | ||||||||||||| |||||||||||| ||| | |||||||||||||||||||| | |||||  ||| |||||| ||||||    
T  39700912 ttaatggtgtgtttcattcttgcaattaggcgttatttaaaaattaatccatgtaatcgctaatcctgacaatatacccttacattatttaattatttaa 39701011  T
Q  153 aaattcgtcctctcaccaacttaat 177  Q
    || ||| |||| | |||||||||||    
T  39701012 aatttcatcctttgaccaacttaat 39701036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 52909276 - 52909402
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc-tctcaccaa 171  Q
    |||||||||| ||| || ||||||| |||  | |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||| |||| || |    
T  52909276 tgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccatctc-ccca 52909374  T
Q  172 cttaataaccgccacgtcagtaatttga 199  Q
    |||||| || |||| |||| ||||||||    
T  52909375 cttaatcactgccatgtcactaatttga 52909402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 9731595 - 9731498
Alignment:
Q  93 aaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    |||||||| | | ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| || | || |||||||| || |||||||||    
T  9731595 aaattagttcctgtaatcgctaatcctgacaatttatccttgtattgtttaatcatttaaaatttcgttctttgactaacttaatcactgccacgtca 9731498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 190
Target Start/End: Complemental strand, 22718354 - 22718225
Alignment:
Q  61 gtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt 160  Q
    ||||||||||| |  ||||||||||||||||||||||| ||  | |||| | |||||||| |||||| | |||| ||||||||||||||||||| |||||    
T  22718354 gtgtttcgtccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 22718255  T
Q  161 cctctcaccaacttaataaccgccacgtca 190  Q
    | | | ||||| ||||| |||| |||||||    
T  22718254 catttgaccaatttaatcaccgacacgtca 22718225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 190
Target Start/End: Original strand, 22986862 - 22986991
Alignment:
Q  61 gtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt 160  Q
    ||||||||||| |  ||||||||||||||||||||||| ||  | |||| | |||||||| |||||| | |||| ||||||||||||||||||| |||||    
T  22986862 gtgtttcgtccttttaattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgt 22986961  T
Q  161 cctctcaccaacttaataaccgccacgtca 190  Q
    | | | ||||| ||||| |||| |||||||    
T  22986962 catttgaccaatttaatcaccgacacgtca 22986991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 24711134 - 24711223
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| || ||| ||||||||||||||||||| |||||||    
T  24711134 tgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgcattgtttaatcatttaaaatttcgtcc 24711223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 50419042 - 50418953
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||| | |||||| ||||||||||||||||||| |||||||    
T  50419042 tgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgcattgtttaatcatttaaaatttcgtcc 50418953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 24411382 - 24411470
Alignment:
Q  74 gcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    ||||||||| ||  |||||||||| |||| | |||||||||| ||||||||||| |||||| |||||||||||||||||| ||||||||    
T  24411382 gcaattaggggtagtttaaaaattggtccctgtaatcgctaaccctgacaatttacccttgcattgtttaatcatttaaagattcgtcc 24411470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 199
Target Start/End: Original strand, 4982724 - 4982875
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||||||||| || |||| ||||||||| ||| ||||||||||| |||| | |||| ||||||| || ||||||  ||||| | |  |||||||    
T  4982724 ttggcttaatgatgtgattagtccttgcaattagacgtaatttaaaaattcgtccatgtaattgctaatcttggcaatttagccttgcaattgttaatca 4982823  T
Q  148 tttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||||| || |||||   ||||||||||| || ||| ||||| ||||||||    
T  4982824 tttaaaatttggtccttggaccaacttaatcactgcctcgtcactaatttga 4982875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 35508645 - 35508558
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt 160  Q
    |||||||||| ||| ||||||||||| ||||| |||||| |||| || ||||||| |||||| ||||||||||||||||||| |||||    
T  35508645 tgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattctaacaatttacccttgcattgtttaatcatttaaaatttcgt 35508558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 18831374 - 18831460
Alignment:
Q  75 caattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc 161  Q
    |||||||| ||| |||||||||| |||| | |||||||||||||||  ||||| |||||| ||||||||||||||||||| ||||||    
T  18831374 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtc 18831460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 35028426 - 35028277
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||  |||||||||| |||| | |  |||||||||||  |||||| |||||| ||||||||||||||    
T  35028426 ggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggtccatatgttcgctaatccttgcaatttacccttgcattgtttaatcatt 35028327  T
Q  150 taaaaattcgtc-ctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| |||||| ||||| || ||||||| || ||||||||| ||||||||    
T  35028326 taaaatttcgtcactctc-cccacttaatcactgccacgtcactaatttga 35028277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 4983124 - 4983011
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||||||||| || |||| |||||||||||||| ||||||||||  ||||| |||| |||||||||  ||||||  ||||| | |  ||||||||    
T  4983124 tggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcatccttgtaattgctaatcctcgcaatttagccttgcaattattaatcat 4983025  T
Q  149 ttaaaaattcgtcc 162  Q
    |||||| |||||||    
T  4983024 ttaaaatttcgtcc 4983011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 5368970 - 5369051
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    ||||||||||  || |||||||||| |||||| ||||||||||||||| |||||| ||| || |||||||||||||||||||    
T  5368970 tgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaa 5369051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 7451857 - 7451946
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | |||||| |||||||| |||||| ||| || ||||||||||||||||||| |||||||    
T  7451857 tgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 7451946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 23613332 - 23613421
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | |||||||||||| || |||||| ||| || ||||||||||||||||||| |||||||    
T  23613332 tgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 23613421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 44967443 - 44967354
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||  ||| |||||||||| |||| | ||||||||||||||| |||||| ||| || ||||||||||||||||||| |||||||    
T  44967443 tgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 44967354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 49879581 - 49879492
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||| |  ||  | |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  49879581 tgcaattaggggtcgtttaaaaactgatctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 49879492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 54087097 - 54087012
Alignment:
Q  76 aattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc 161  Q
    ||||||| ||| |||||||||| |||| | |||||| ||||| ||||||||| |||||| ||||||||||||||||||| ||||||    
T  54087097 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcatttaaaatttcgtc 54087012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 27934532 - 27934644
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| |||||||||| ||| |||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  |||||||||    
T  27934532 ggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 27934631  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  27934632 taaaatttcgtcc 27934644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 30642565 - 30642425
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||||||||||||||||| | ||||||||||||||  || || |||||| |||||||  ||| ||   |||| |  |||||||||||||||| |||    
T  30642565 atgtgtttcgtccctgcaattatgggtcatttaaaaattcatcattgtaatcgttaatcctagcaaattagtcttgcaaagtttaatcatttaaaatttc 30642466  T
Q  159 gtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||  | ||| ||||||| || ||||||||| ||||||||    
T  30642465 gtcccttgacccacttaatgactgccacgtcattaatttga 30642425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 32062598 - 32062702
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||| ||||||| ||||||| |||||||||||||| |||||| ||| |  |||||||||||| ||  |||||||   ||||||||||||||| |||    
T  32062598 atgtgtttggtccctgaaattaggggtcatttaaaaattggtccttgtaaacattaatcctgacaaattagccttgtaaaatttaatcatttaaaatttc 32062697  T
Q  159 gtcct 163  Q
    |||||    
T  32062698 gtcct 32062702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41943114 - 41943066
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41943114 tttgatatgcttcttgatttaatggatgagtgaaaagatttattgtgtt 41943066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 51692553 - 51692665
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||  ||| ||||||||||  ||  | |||||||||||||||||||||| |||||| |||||||||||| |    
T  51692553 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcact 51692652  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  51692653 taaaatttcgtcc 51692665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 199
Target Start/End: Original strand, 53701826 - 53701961
Alignment:
Q  64 tttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cc 162  Q
    |||| ||| |||||||||| ||| ||||||||||  ||  | ||||| ||||||||||||||||  ||||| ||||||||||||||||||| ||| | ||    
T  53701826 tttcatccttgcaattaggggtcgtttaaaaattgatctctgtaatctctaatcctgacaatttatccttgcattgtttaatcatttaaaatttcttccc 53701925  T
Q  163 tctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||| || ||||||| || ||||||||| ||||||||    
T  53701926 tctc-cccacttaatcactgccacgtcactaatttga 53701961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 11448157 - 11448046
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| ||||||||||| ||||||| ||| ||||||||||  ||  | ||||||||||||||  ||| || |||||| ||||||||||||||    
T  11448157 ggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatcatt 11448058  T
Q  150 taaaaattcgtc 161  Q
    ||||| ||||||    
T  11448057 taaaatttcgtc 11448046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 16005864 - 16005950
Alignment:
Q  76 aattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    ||||||| ||| ||||||||||| ||| | ||||||||||| ||| ||||||  || |||||||||||||||||||||| |||||||    
T  16005864 aattaggggtcgtttaaaaattaatccctgtaatcgctaattctggcaatttatccatgtattgtttaatcatttaaaatttcgtcc 16005950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 199
Target Start/End: Complemental strand, 37976557 - 37976432
Alignment:
Q  74 gcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc-ctctcaccaac 172  Q
    ||||||||| ||| ||||||||||  ||| | ||||||||||| ||||||||||  | ||| ||||||||||||||||||| |||||| ||||| || ||    
T  37976557 gcaattaggggtcgtttaaaaattgatccctgtaatcgctaattctgacaatttatcattgcattgtttaatcatttaaaatttcgtcactctc-cccac 37976459  T
Q  173 ttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||| |||| ||||||||    
T  37976458 ttaatcactgccatgtcactaatttga 37976432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 13058060 - 13058149
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||  | |||||||||||||||  ||||| ||| || ||||||||||||||||||| |||||||    
T  13058060 tgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgcattgtttaatcatttaaaatttcgtcc 13058149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 22567183 - 22567114
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||| |||| | |||| |||||||||    
T  22567183 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct 22567114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 38012567 - 38012418
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||| ||    
T  38012567 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 38012468  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || ||||| | ||||| ||||| || ||||||||| ||||||||    
T  38012467 taaaatttggtcctttgaccaaattaatcactgccacgtcactaatttga 38012418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 55867523 - 55867430
Alignment:
Q  69 tccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||||||| ||| |||||||||| |||| | |||||| |||||||  |||  | |||||| ||||||||||||||||||| |||||||    
T  55867523 tccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatcatttaaaatttcgtcc 55867430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3295353 - 3295401
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  3295353 tttgatatgcttcttgatttaatggatgagagaaaagatttattgtgtt 3295401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 11446279 - 11446382
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||||||||||||||||||  |||||||||||||| || | |  ||||| |||||||| ||| || |||||| |  |||||||| ||||||| |||    
T  11446279 atgtgtttcgtccctgcaattagaggtcatttaaaaattggttcatggaatcgttaatcctggcaaattacccttgcaaagtttaatcttttaaaatttc 11446378  T
Q  159 gtcc 162  Q
    ||||    
T  11446379 gtcc 11446382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 9144773 - 9144915
Alignment:
Q  57 tgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaat 156  Q
    |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||||||||||| |    
T  9144773 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaaaatt 9144872  T
Q  157 tcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    | |||||   ||||| ||||| || ||||||||| ||||||||    
T  9144873 tggtccttggaccaaattaatcactgccacgtcactaatttga 9144915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 154
Target Start/End: Complemental strand, 9400914 - 9400812
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    |||||||||||| || |||| |||||||||| ||| |||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  |||||||||||    
T  9400914 cttaatgatgtgattagtccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcattta 9400815  T
Q  152 aaa 154  Q
    |||    
T  9400814 aaa 9400812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 33247297 - 33247422
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaac 172  Q
    |||||||||| |||||||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  |||||||||| ||| || |||||   ||||||    
T  33247297 tgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcattt-aaatttggtccttggaccaac 33247395  T
Q  173 ttaataaccgccacgtcagtaatttga 199  Q
    ||||| || ||||||||| ||||||||    
T  33247396 ttaatcactgccacgtcactaatttga 33247422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 39666772 - 39666889
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg------acaatttccccttgtattgtttaat 145  Q
    |||||||||||||||||||  || ||||||  ||||||||||||||||||  | |||||||||||||||      | || || || ||| ||||||||||    
T  39666772 cttaatgatgtgtttcgtctttgtaattagaagtcatttaaaaattagtcaatgtaatcgctaatcctggcatttaaaaattacctttgcattgtttaat 39666871  T
Q  146 catttaaaaattcgtcct 163  Q
    ||||||||| ||||||||    
T  39666872 catttaaaatttcgtcct 39666889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 10336177 - 10336132
Alignment:
Q  4 gatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  10336177 gatatgcttcttgatttaatggatgagtgaaaagatttagtgtgtt 10336132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 34837074 - 34837223
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||| ||    
T  34837074 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 34837173  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||| ||||| || ||||||||| ||||||||    
T  34837174 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 34837223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 42738031 - 42738180
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| | |||||||| || |||  ||||| | |  |||||| ||    
T  42738031 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccttgcaattgttaatcgtt 42738130  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||| ||||| || ||||||||| ||||||||    
T  42738131 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 42738180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 35028007 - 35028147
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| |||||||||| || | | || |||||||||||  |||  |  ||||| | |  |||||||||||||| |||    
T  35028007 atgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttc 35028106  T
Q  159 gtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||| | | ||||||||||| |||||||||||| ||||||||    
T  35028107 gtcttttgaccaacttaatcaccgccacgtcactaatttga 35028147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 42738428 - 42738316
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||||||    
T  42738428 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 42738329  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  42738328 taaaatttcgtcc 42738316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 51859471 - 51859543
Alignment:
Q  114 aatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaataaccgccac 186  Q
    ||||||| |||||| |||||| ||| ||||||||||||||| |||||||| | ||||||||||| || |||||    
T  51859471 aatcctggcaatttacccttgcattatttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 51859543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 41582456 - 41582559
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    ||||||||| |||||||||| ||| |||||||||||||| |||| | |||||| |||||||| ||| || ||| || |    |||||||||||||| |||    
T  41582456 atgtgtttcatccctgcaatcaggggtcatttaaaaattggtccctctaatcgttaatcctggcaaattgcccctgcaaaagttaatcatttaaaatttc 41582555  T
Q  159 gtcc 162  Q
    ||||    
T  41582556 gtcc 41582559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 8439561 - 8439503
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||  | ||| ||||||| |||||||||||||||||||||    
T  8439561 ttaatcatttaaaatttcgtcccttgacccacttaatcaccgccacgtcagtaatttga 8439503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 36009203 - 36009129
Alignment:
Q  88 tttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| |||| | |||||| ||||||||  ||||| ||| || ||||||||||||||||||| |||||||    
T  36009203 tttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgcattgtttaatcatttaaaatttcgtcc 36009129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 43155898 - 43155812
Alignment:
Q  76 aattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    ||||||| ||| |||||||||| |||| | |||||| |||||||| ||||||  || || ||| ||||||||||||||| |||||||    
T  43155898 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatcatttaaaatttcgtcc 43155812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 44967092 - 44967218
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaac 172  Q
    |||||||||| ||| |||||||||| |||  | || ||||||||||| ||||  |  ||||| | |  |||||||||||||| || ||||| | ||||||    
T  44967092 tgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttacaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaac 44967191  T
Q  173 ttaataaccgccacgtcagtaatttga 199  Q
    ||||| || ||||||||| ||||||||    
T  44967192 ttaatcactgccacgtcactaatttga 44967218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 46661251 - 46661193
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| ||||||||    
T  46661251 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttga 46661193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 50418691 - 50418817
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaac 172  Q
    |||||||||| ||| |||||||||| |||| | |||||| |||||||  |||  |  ||||| | |  |||||||||||||| |||||||| | |||||     
T  50418691 tgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaat 50418790  T
Q  173 ttaataaccgccacgtcagtaatttga 199  Q
    ||||| || ||||||||| ||||||||    
T  50418791 ttaatcactgccacgtcactaatttga 50418817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 51203609 - 51203679
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| ||||||||||    
T  51203609 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 51203679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 53129934 - 53129785
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||| ||| ||| ||||||||||  ||||  ||||||||||||||  |||||| |||| | ||||||| ||| ||    
T  53129934 ggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaatttaccctcgcattgtttcatcgtt 53129835  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| ||||| |||||| || ||||||| || ||||| ||| ||||||||    
T  53129834 taaaatttcgtccctctc-cccacttaatcactgccacatcactaatttga 53129785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 199
Target Start/End: Complemental strand, 17356325 - 17356201
Alignment:
Q  75 caattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaact 173  Q
    |||||| | ||| |||||||||| |||| | || ||||||||| || |||||| | |||| ||||||| ||||||||||| ||||| |||||| || |||    
T  17356325 caattacgggtcgtttaaaaattggtccctgtattcgctaatcttggcaatttactcttgcattgtttgatcatttaaaatttcgtccctctc-cccact 17356227  T
Q  174 taataaccgccacgtcagtaatttga 199  Q
    |||| || | ||||||| ||||||||    
T  17356226 taatcactgtcacgtcactaatttga 17356201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 27934907 - 27934846
Alignment:
Q  58 gatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    |||||| || |||| ||||||||||||||||||||||||| |||| | |||| |||||||||    
T  27934907 gatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct 27934846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 40387476 - 40387537
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    ||||||||| |||||||||||||| | |||||||||||| |||| | || ||||||||||||    
T  40387476 atgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctg 40387537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 40388525 - 40388464
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    ||||||||| |||||||||||| | | |||||||||||| |||| | |||||||||||||||    
T  40388525 atgtgtttcatccctgcaattaagggccatttaaaaattggtccctctaatcgctaatcctg 40388464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 9145163 - 9145051
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||  |||| | |||| |||||||||| || |||  || || | |  |||||||||    
T  9145163 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatgcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 9145064  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  9145063 taaaatttcgtcc 9145051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 30641529 - 30641630
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    ||||||||||||||| |||||||| |||||||||||||| |||  | |||||| |||||||  ||| || || ||  |  |||||||||||||||| |||    
T  30641529 atgtgtttcgtccctccaattaggggtcatttaaaaatttgtc--tgtaatcgttaatccttgcaaattaccattacaaagtttaatcatttaaaatttc 30641626  T
Q  159 gtcc 162  Q
    ||||    
T  30641627 gtcc 30641630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 154
Target Start/End: Complemental strand, 6237223 - 6237144
Alignment:
Q  75 caattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||||||||||||| ||||||  | |||| ||||||||||| ||||| |||||  | |  ||||||||||||||    
T  6237223 caattaggcgtcatttaaaatttagtctctgtaattgctaatcctgagaatttacccttacaattgttaatcatttaaaa 6237144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 199
Target Start/End: Complemental strand, 7452233 - 7452082
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  |||| |||  ||| |||||||||| ||| |||||||||| |||  | || |||||||||||  |||  |  ||||| | |  |||||||    
T  7452233 ttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatca 7452134  T
Q  148 tttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||||| || ||||| | ||||||||||| || ||||||||| ||||||||    
T  7452133 tttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttga 7452082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 10203630 - 10203725
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||||||||  ||||| | ||||||||||||||||||  | |||||| |||| ||||||| ||  |||| ||   |||||||||||||||    
T  10203630 atgtgtttcgtccctataattaagggtcatttaaaaattagtcactgtaatcgttaattctgacaaattatccttataaaatttaatcatttaaaa 10203725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 32063755 - 32063660
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||| ||| ||||||||||||||| |||||||||||||| ||   | |||||| |||| ||| ||| || |||||| |  ||||||||||||||||    
T  32063755 atgtattttgtccctgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaagtttaatcatttaaaa 32063660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 161
Target Start/End: Original strand, 32950142 - 32950253
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| ||||   |||| |||||||||| || |||  || || | |  |||||||||    
T  32950142 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtcccagtaattgctaatcctggcattttaaccctgcaattgttaatcatt 32950241  T
Q  150 taaaaattcgtc 161  Q
    ||||| ||||||    
T  32950242 taaaatttcgtc 32950253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 38012169 - 38012240
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    ||||||| |||||||||  | || |||||||||||| |||||||||||| |||| | |||| ||||||||||    
T  38012169 tggcttattgatgtgttcagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 38012240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 13058319 - 13058261
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| || ||||| | ||||||||||| || ||||||||| ||||||||    
T  13058319 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttga 13058261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 17356016 - 17356074
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||| | | ||||||||||| || ||||||||| ||||||||    
T  17356016 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaatttga 17356074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 32950539 - 32950469
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||||||| | || |||||||||| | |||||||||||| |||| | |||| ||||||||||    
T  32950539 ggcttattgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccctgtaattgctaatcctg 32950469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 34837471 - 34837401
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||  | |||| ||||||||||    
T  34837471 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctg 34837401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 97
Target Start/End: Complemental strand, 41583650 - 41583612
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaatt 97  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  41583650 atgtgtttcatccctgcaattaggggtcatttaaaaatt 41583612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 148183 - 148114
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    |||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| |||| ||| |||||||    
T  148183 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctttattcgttaatcct 148114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 6236838 - 6236934
Alignment:
Q  57 tgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||| ||| |||| ||||||||| |||||||||||| ||||| ||| |||||| |||||| |  ||||| |||||| | |  ||||||||||||||    
T  6236838 tgatgtctttagtccttgcaattagacgtcatttaaaatttagt-cttgtaatcgttaatcccgggaatttacccttgcaattgttaatcatttaaaa 6236934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 14802072 - 14802015
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttg 198  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||| ||| |||||||    
T  14802072 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcactaatttg 14802015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 33247667 - 33247566
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||| || |||| ||||||||||  || |||||||||  |||| | |||| |||||||||| ||||||  ||||| | |  ||||||||||||    
T  33247667 ttaatgatgtgattagtccttgcaattagggatcgtttaaaaatccgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 33247568  T
Q  153 aa 154  Q
    ||    
T  33247567 aa 33247566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 39539346 - 39539197
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||| | ||| |||||||||| |||  | |||||| |||| ||  ||| ||  ||||| ||| ||||||||||    
T  39539346 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatcatt 39539247  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| |||||||| | ||| | ||||| || ||||| ||| ||||||||    
T  39539246 taaaatttcgtcctttgacccagttaatgactgccacatcattaatttga 39539197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 55866109 - 55866158
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaatt 97  Q
    |||||||||  |||| ||||||||||||||||||| ||| ||||||||||    
T  55866109 ttggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaatt 55866158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 42617909 - 42618038
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||    
T  42617909 ttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctgacaatttacccttgcattgtttaatca 42618008  T
Q  148 tttaaaaattcgtcctctcaccaacttaat 177  Q
    ||||||| |||||||| | | |||||||||    
T  42618009 tttaaaatttcgtcctttgatcaacttaat 42618038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 25453128 - 25453255
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||| ||| ||||||||||    
T  25453128 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcattatttaatcatt 25453227  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | |||||||||||    
T  25453228 taaaatttcgtcctttgaccaacttaat 25453255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 43266692 - 43266565
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| |||||||||| |||||| ||||||||||||||    
T  43266692 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttacccttgcattgtttaatcatt 43266593  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | |||||||||||    
T  43266592 taaaatttcgtcctttgaccaacttaat 43266565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 27138367 - 27138227
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||    
T  27138367 ggcttaatgatgtgtttcgtcctttcaatcaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 27138268  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| ||| | || | ||||||||||| ||||||| ||||    
T  27138267 taaaatttctttctttgaccaacttaatcaccgccaagtca 27138227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 10600377 - 10600248
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||    
T  10600377 ttggtttaatgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatca 10600278  T
Q  148 tttaaaaattcgtcctctcaccaacttaat 177  Q
    || |||| || ||||| | |||||||||||    
T  10600277 ttcaaaattttgtcctttgaccaacttaat 10600248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 25628481 - 25628618
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| || |||||| |||||||| |||||| |||||| |||||||||||||||||    
T  25628481 ttaatgatgtgtttcgtgcttgcaattaggcgtcatttaaaaattagtcattgtaatcgataatcctggcaatttacccttgcattgtttaatcatttaa 25628580  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | ||||||||||| || |||||||||    
T  25628581 aatttcgtcctttgaccaacttaatcactgccacgtca 25628618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 49 - 190
Target Start/End: Complemental strand, 32068523 - 32068382
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| | ||||||||||||||| |||||| |||||| |||||||||||||    
T  32068523 tggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcctgccaatttacccttgcattgtttaatcat 32068424  T
Q  149 ttaaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    |||||| |||||| | | ||||||||||| || |||||||||    
T  32068423 ttaaaatttcgtcatttgaccaacttaatcactgccacgtca 32068382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 42618334 - 42618197
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||| |||||| |||||| |||||||||||||||||    
T  42618334 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 42618235  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | ||||||||||| || | |||||||    
T  42618234 aatttcgtcctttgaccaacttaatcactgtcacgtca 42618197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 32068099 - 32068223
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| |||||| |||||||||||||||||    
T  32068099 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 32068198  T
Q  153 aaattcgtcctctcaccaacttaat 177  Q
    || ||||| || | |||||||||||    
T  32068199 aatttcgtactttgaccaacttaat 32068223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 43266266 - 43266406
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||||||| |||||| ||||||||||||||    
T  43266266 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatt 43266365  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| ||| || | | ||||||||||| || | |||||||    
T  43266366 taaaatttcatcatttgaccaacttaatcactgtcacgtca 43266406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 32934774 - 32934647
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||| | |||  ||||||||||||||    
T  32934774 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttactcttacattgtttaatcatt 32934675  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||| | | |||||||||||    
T  32934674 taaaatttcgtcatttgaccaacttaat 32934647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 25628902 - 25628777
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||  | |||||||||||||||||||||| |||||| ||||||||||||||||    
T  25628902 cttaatgatgtgtctcgtccttgcaattatgcgtcatttaaaaattagtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcattta 25628803  T
Q  152 aaaattcgtcctctcaccaacttaat 177  Q
    ||| |||||||| | |||||||||||    
T  25628802 aaatttcgtcctttgaccaacttaat 25628777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 23058855 - 23058715
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| |||||| |||||||| |||||| |||| | ||||||||||||||    
T  23058855 ggcttaatgatgtgtttcgtccttgcaattcggcgtcatttaaaaattaatccttgtaatcgttaatcctggcaatttaccctcgcattgtttaatcatt 23058756  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||| | | ||||||||||| || |||||||||    
T  23058755 taaaatttcgtcatttgaccaacttaattactgccacgtca 23058715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 32934351 - 32934475
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||  | |||||||||||||||||||||| |||||| |||||||||||||||||    
T  32934351 ttaatgatgtgtttcatccttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 32934450  T
Q  153 aaattcgtcctctcaccaacttaat 177  Q
    || |||||||| | |||||||||||    
T  32934451 aatttcgtcctttgaccaacttaat 32934475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 33828400 - 33828273
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||||||||  | |||||||||||||||||||||| |||||| ||||||||||||||    
T  33828400 ggcttaatgatgagtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 33828301  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||| | | |||||||||||    
T  33828300 taaaatttcgtcatttgaccaacttaat 33828273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 190
Target Start/End: Original strand, 22081558 - 22081699
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||| ||| |||||| |||||| ||||||||||||    
T  22081558 ttggcttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtcc-tctaatcgctaatgctggcaatttacccttgcattgtttaatca 22081656  T
Q  148 tttaaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||||| |||||||| | | ||||||||| || |||| ||||    
T  22081657 tttaaaatttcgtcctttgatcaacttaatcactgccaagtca 22081699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 28890582 - 28890719
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||  |||||| |||||| |||||||||||||||||    
T  28890582 ttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 28890681  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||| | | || |||||||| || | |||||||    
T  28890682 aatttcgtcttttgactaacttaatcactgtcacgtca 28890719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 22081989 - 22081858
Alignment:
Q  46 tgttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaat 145  Q
    ||||||||||||||| |||||||||| |||||||| |||||||||||||||||||   | ||||||||||||||| |||||| |||||| ||||||||||    
T  22081989 tgttggcttaatgatttgtttcgtccttgcaattatgcgtcatttaaaaattagtttctgtaatcgctaatcctggcaatttacccttgcattgtttaat 22081890  T
Q  146 catttaaaaattcgtcctctcaccaacttaat 177  Q
    ||||||||| |||||| | | |||||||||||    
T  22081889 catttaaaatttcgtcatttgaccaacttaat 22081858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 46204424 - 46204548
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||| ||||||||||| || ||| ||| ||| |||||||||    
T  46204424 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaaacctgacaatttaccattgcattattttatcatttaa 46204523  T
Q  153 aaattcgtcctctcaccaacttaat 177  Q
    || |||||||  | |||||||||||    
T  46204524 aatttcgtccattgaccaacttaat 46204548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 25453551 - 25453414
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||  || ||||| ||||||||||||||||||||| |  |||||||||||||  |||||| |||||| |||||||||||||||||    
T  25453551 ttaatgatgtgtttcgtctttgtaattaagcgtcatttaaaaattagtccctgaaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 25453452  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
     | |||||||| | |||| |||||| ||||||||||||    
T  25453451 catttcgtcctttgaccagcttaatcaccgccacgtca 25453414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 23058428 - 23058556
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||||||||| | ||||  ||||||||| |||| | || ||| |||||||||||||    
T  23058428 tggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattagtccctgtaattactaatcctggcaatataccattgcattgtttaatcat 23058527  T
Q  149 ttaaaaattcgtcctctcaccaacttaat 177  Q
    |||||| |||||||| | |||||||||||    
T  23058528 ttaaaatttcgtcctttgaccaacttaat 23058556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 32680595 - 32680744
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||| || | | |||| |||||||||||||||||  ||||| | |  |||||||||    
T  32680595 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaatttagccttgcaattgttaatcatt 32680694  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||||||||| || ||||||||| ||||||||    
T  32680695 taaaatttggtccttggaccaacttaatcactgccacgtcactaatttga 32680744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 39274873 - 39275011
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    |||||||||||||| |||| ||||||| ||||| |||||||||||||||  | ||||||||||||||   ||||| || ||| |||||||||||||||||    
T  39274873 ttaatgatgtgttttgtccttgcaatttggcgttatttaaaaattagtctctgtaatcgctaatcctagtaatttacctttgcattgtttaatcatttaa 39274972  T
Q  153 aaattcgtcc-tctcaccaacttaataaccgccacgtca 190  Q
    || ||||||| | | ||||||||||| || |||||||||    
T  39274973 aatttcgtccttttgaccaacttaatcactgccacgtca 39275011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 64 - 199
Target Start/End: Original strand, 10935808 - 10935943
Alignment:
Q  64 tttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cc 162  Q
    |||| ||| |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||| ||    
T  10935808 tttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccc 10935907  T
Q  163 tctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||| || ||||||| || |||| |||| ||||||||    
T  10935908 tctctcc-acttaatcactgccatgtcactaatttga 10935943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 13044681 - 13044784
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||| |||||| |||||||||||| ||||||||| || ||||   ||||||||| |||||||||||| || ||| |||||||||||||||||||||||    
T  13044681 atgtgtctcgtccttgcaattaggcgccatttaaaatttcgtcccagtaatcgctactcctgacaatttaccattgcattgtttaatcatttaaaaattc 13044780  T
Q  159 gtcc 162  Q
    ||||    
T  13044781 gtcc 13044784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 32688637 - 32688506
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||||| || |||||||||| ||||||||||| || |||||| ||||||||||||||||||| || |||||| |    |||||||||||||| |||    
T  32688637 atgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttgcaaatattaatcatttaaaatttc 32688538  T
Q  159 gtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||  | ||| |||||||||| |||||||||    
T  32688537 gtcccttgacccacttaataactgccacgtca 32688506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 42731442 - 42731568
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaa 171  Q
    |||||||||| ||| |||||||||| |||||| ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||| |||||| || |    
T  42731442 tgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctc-ccca 42731540  T
Q  172 cttaataaccgccacgtcagtaatttga 199  Q
    |||||| || |||| |||| ||||||||    
T  42731541 cttaatcactgccatgtcactaatttga 42731568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 28469436 - 28469287
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| | |||||| |||||||| |||||| |||||| ||||||||||||||    
T  28469436 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 28469337  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| ||||| |||||| || ||||||| ||  |||||||| ||||||||    
T  28469336 taaaatttcgtccctctc-cccacttaatcactaccacgtcactaatttga 28469287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 10600025 - 10600102
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatt 126  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||| |||||    
T  10600025 tggctaaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgttaatcctggcaatt 10600102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 177
Target Start/End: Complemental strand, 46205732 - 46205608
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||| | ||||||||    ||||||||| ||| || | | |||||| |||||||||||| || |||||| |||||||||||||||||    
T  46205732 ttaatgatgtgtttcgttcttgcaattaatgatcatttaaagattggttcctgtaatcgttaatcctgacaaattacccttgcattgtttaatcatttaa 46205633  T
Q  153 aaattcgtcctctcaccaacttaat 177  Q
    || |||||||| | |||||||||||    
T  46205632 aatttcgtcctttgaccaacttaat 46205608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 27397023 - 27396874
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| | |||||||||||||||||||||  ||  || ||||||||||||||    
T  27397023 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattcaccactgcattgtttaatcatt 27396924  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| ||||| |||||| || ||||||| || |||||||||  |||||||    
T  27396923 taaaatttcgtccctctc-cccacttaatcactgccacgtcaagaatttga 27396874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 6253494 - 6253583
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| ||| || ||||||||||||||||||| |||||||    
T  6253494 tgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 6253583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 6571036 - 6571117
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||| ||| |||||||||| |||| | |||||| ||||||||||||||| |||||| |||||||||||||||||||    
T  6571036 tgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaa 6571117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 17102043 - 17102132
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| ||| || ||||||||||||||||||| |||||||    
T  17102043 tgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 17102132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 32299110 - 32299021
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| |||||| |||||||||||||| |||| |||||||    
T  32299110 tgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattgaaaatttcgtcc 32299021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 40379778 - 40379918
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| |||||||||| ||| || || |||||||||||  |||||| || ||||||||||||||||||||||| |||    
T  40379778 atgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaatttacctttgtattgtttaatcatttaaaatttc 40379877  T
Q  159 gt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    || |||||| || ||||||| |  ||||||||| ||||||||    
T  40379878 gtccctctc-cccacttaatcaatgccacgtcactaatttga 40379918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 18856070 - 18855970
Alignment:
Q  62 tgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc 161  Q
    ||||||||||||||||||||| |||||||||||||| |||| | |||||| ||||| || ||| || |||||| |  |||||||||||||||| ||||||    
T  18856070 tgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatttaaaatttcgtc 18855971  T
Q  162 c 162  Q
    |    
T  18855970 c 18855970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 32680992 - 32680880
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| |||||||||||||| |||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  |||||||||    
T  32680992 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 32680893  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  32680892 taaaatttcgtcc 32680880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 22871682 - 22871601
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||| |||||||||||||| |||| | |||| |||||||||  |||||| |||||| |||||||||||||||||||    
T  22871682 tgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgcattgtttaatcatttaaaa 22871601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 23181399 - 23181310
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||| ||| |||| | |||||||||||| || |||||| |||||| ||||||||||||||||||| |||||||    
T  23181399 tgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 23181310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 13050200 - 13050096
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttg-tattgtttaatcatttaaaaatt 157  Q
    ||||||||||||| ||||||||||||| |||| ||| || |||| | |||||| ||||||||  ||||| ||||||  |||||||||||||||||||||     
T  13050200 atgtgtttcgtccttgcaattaggcgtaattttaaatttcgtccctgtaatcgttaatcctggtaatttacccttgcaattgtttaatcatttaaaaatc 13050101  T
Q  158 cgtcc 162  Q
    |||||    
T  13050100 cgtcc 13050096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 45011032 - 45010893
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| || | | || |||||||||||  |||||| |||||| ||||||||||||||    
T  45011032 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatcatt 45010933  T
Q  150 taaaaattcgtc-ctctcaccaacttaataaccgccacgtc 189  Q
    ||||| |||||| ||||| || ||||||| || ||||||||    
T  45010932 taaaatttcgtctctctc-cccacttaatcactgccacgtc 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 42362448 - 42362563
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||||| || ||| |||||||  ||| || |||||| ||| ||||||||    
T  42362448 ttggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgcattctttaatca 42362547  T
Q  148 tttaaaaattcgtcct 163  Q
    ||||||| ||||||||    
T  42362548 tttaaaatttcgtcct 42362563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 43124546 - 43124468
Alignment:
Q  84 gtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||||||| |||| | |||||||||||||| ||||  | |||||| ||||||||||||||||||| |||||||    
T  43124546 gtcatttaaaaattggtccctgtaatcgctaatccttacaaactacccttgcattgtttaatcatttaaaatttcgtcc 43124468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 16804050 - 16803969
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||| ||| |||||||||| |||| | ||||||| ||||||  |||||| |||||| |||||||||||||||||||    
T  16804050 tgcaattaggggtcgtttaaaaattggtccctgtaatcgccaatcctagcaatttacccttgcattgtttaatcatttaaaa 16803969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 27991762 - 27991851
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||| |||||  ||| | ||||||||||||||| |||||| ||| || ||||||||||||||||||| |||||||    
T  27991762 tgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 27991851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10530237 - 10530189
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||    
T  10530237 tttgatatgcttcttgatttaatggatgagtgaaaagatttatcgtgtt 10530189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13167942 - 13167990
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  13167942 tttgatatgcttcttgatttaatggatgagggaaaagatttattgtgtt 13167990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 24388828 - 24388931
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||| | ||| |||||||||| |||  | || ||||||||| || |||||| ||||||||||||||||||| |||||| |||    
T  24388828 atgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatcatggcaatttacccttgtattgtttaatcacttaaaatttc 24388927  T
Q  159 gtcc 162  Q
    ||||    
T  24388928 gtcc 24388931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 19204515 - 19204593
Alignment:
Q  76 aattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    ||||||| ||| |||||||||| |||| | |||||| |||| ||| |||||| |||||| |||||||||||||||||||    
T  19204515 aattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaa 19204593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 2640580 - 2640495
Alignment:
Q  76 aattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc 161  Q
    ||||||| ||| |||||||||| | |  | ||||||||||| ||| |||||| |||||| ||||||||||||||||||| ||||||    
T  2640580 aattaggggtcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtc 2640495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 34928650 - 34928799
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||| ||    
T  34928650 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 34928749  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||| ||||| || ||||||||| ||||||||    
T  34928750 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 34928799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 37656861 - 37657001
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| ||||||||||  || |||||||||| |||  | ||||||||||||||  |||||| | |||| |||||||| | |||||||| |||    
T  37656861 atgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatcctcgcaatttacgcttgcattgtttatttatttaaaatttc 37656960  T
Q  159 gt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    || |||||| || ||||||| |||| ||||||| ||||||||    
T  37656961 gtccctctc-cccacttaatcaccggcacgtcactaatttga 37657001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 5457335 - 5457223
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||||| || ||| |||||||  ||| || |||||  | ||||||||||||    
T  5457335 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatcatt 5457236  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  5457235 taaaatttcgtcc 5457223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9745182 - 9745230
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||||    
T  9745182 tttgatatgcttcttgattcaatggatgagtgaaaatatttattgtgtt 9745230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 22828237 - 22828097
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    ||||||||| ||| || ||||||| |||||||||||||| |||||| |||||| ||||| |||||| || ||| || |    |||||||||||||| |||    
T  22828237 atgtgtttcatccttgtaattaggggtcatttaaaaattggtccttgtaatcgttaatcttgacaaattacccctgcaaaccttaatcatttaaaatttc 22828138  T
Q  159 gtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
     ||   | ||| ||||||| ||||||| || ||||||||||    
T  22828137 atcacttaacccacttaatcaccgccatgttagtaatttga 22828097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 30948557 - 30948445
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||||||    
T  30948557 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 30948458  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  30948457 taaaatttcgtcc 30948445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 45010648 - 45010747
Alignment:
Q  100 tccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc-tctcaccaacttaataaccgccacgtcagtaatttg 198  Q
    ||||| |||||||||||| || |||||| | |||| ||||||||||||||||||| ||||||| |||| || ||||||| || |||| |||| |||||||    
T  45010648 tccttgtaatcgctaatcttggcaatttacgcttgcattgtttaatcatttaaaatttcgtccatctc-cccacttaatcactgccaagtcactaatttg 45010746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 29587633 - 29587668
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaa 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  29587633 tttgatatgcttcttgatttaatggatgagtgaaaa 29587668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 27992113 - 27991987
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaac 172  Q
    |||||||||| ||| |||||||||| |||| | || |||||||||||  |||  |  ||||| | |  |||||||||||||| || ||||| | ||||||    
T  27992113 tgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaac 27992014  T
Q  173 ttaataaccgccacgtcagtaatttga 199  Q
    ||||| || ||||||||| ||||||||    
T  27992013 ttaatcactgccacgtcactaatttga 27991987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 34929047 - 34928977
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| ||||||||||    
T  34929047 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 34928977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 39686931 - 39686861
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| ||||||||||    
T  39686931 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 39686861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 42020016 - 42019914
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||  |||||||||| || | | |||||||||||| || |||||| | |||| |||||||||| |||||||| |||    
T  42020016 atgtatttcatccttgcaattaggggttgtttaaaaattggttcctataatcgctaatcttggcaatttactcttgcattgtttaattatttaaaatttc 42019917  T
Q  159 gtc 161  Q
    |||    
T  42019916 gtc 42019914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46002840 - 46002803
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaaga 38  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  46002840 tttgatatgcttcttgattcaatggatgagtgaaaaga 46002803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 17102394 - 17102270
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaac 172  Q
    |||||||||| ||| |||||||||| |||| | || |||||||||||  |||  |  ||||| | |  |||||||||||||| || ||||| | ||||||    
T  17102394 tgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaac 17102295  T
Q  173 ttaataaccgccacgtcagtaattt 197  Q
    ||||| || ||||||||| ||||||    
T  17102294 ttaatcactgccacgtcactaattt 17102270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 18087757 - 18087697
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    |||||||| |||| |||||||||| |||||||||||||| |||  | ||||||||||||||    
T  18087757 atgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatcct 18087697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 2640269 - 2640324
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  2640269 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 2640324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 199
Target Start/End: Original strand, 30948158 - 30948309
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||| ||| ||||||||||   || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  ||||||     
T  30948158 ttggtttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcg 30948257  T
Q  148 tttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||||| || |||||   ||||| ||||| || ||||||||| ||||||||    
T  30948258 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 30948309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 42731756 - 42731701
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  42731756 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 42731701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 22871399 - 22871457
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||| ||||| || ||||||||| ||||||||    
T  22871399 ttaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttga 22871457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 43123174 - 43123244
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    ||||||||  |||| ||||||||||||||||||| ||| |||||||||| |||| | || || ||||||||    
T  43123174 tggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgtattcactaatcct 43123244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 10092287 - 10092226
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||||||||||||| ||||||| ||||| |||||||  |||| | |||||| ||||||||    
T  10092287 atgtgtttcgtccctgtaattaggggtcatgtaaaaatcggtccctataatcgttaatcctg 10092226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 199
Target Start/End: Complemental strand, 32053546 - 32053422
Alignment:
Q  75 caattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaact 173  Q
    ||||||||  || |||||||||| || | | |||||| |||||||  ||||||  | ||| ||||||||||||||||||| ||||| |||||| || |||    
T  32053546 caattagggatcgtttaaaaattggttcctataatcgttaatcctagcaatttatcattgcattgtttaatcatttaaaatttcgtccctctc-cccact 32053448  T
Q  174 taataaccgccacgtcagtaatttga 199  Q
    |||| || | ||||||| ||||||||    
T  32053447 taatcactgtcacgtcactaatttga 32053422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 32687406 - 32687507
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||| |||| || ||||||| ||||||||||| || |||| | |||||| |||||||| ||| || |||||| |    |||||||||||||| |||    
T  32687406 atgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgcccttgcaaatattaatcatttaaaatttc 32687505  T
Q  159 gt 160  Q
    ||    
T  32687506 gt 32687507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 18855419 - 18855479
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    |||| |||||||||||||| |||| |||||||||||| | |||| | |||||| |||||||    
T  18855419 atgtttttcgtccctgcaaataggggtcatttaaaaaatggtccctataatcgttaatcct 18855479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 154
Target Start/End: Complemental strand, 20426758 - 20426654
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| |||||||||||||  ||| |||||||||| |||| | || |||||||||||| || ||| ||||   |  |||||||||||    
T  20426758 ggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctggcattttaccctcacaaagtttaatcatt 20426659  T
Q  150 taaaa 154  Q
    |||||    
T  20426658 taaaa 20426654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 48789175 - 48789127
Alignment:
Q  106 taatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||| |||| ||| |||||| |||||| |||||||||||||||||||    
T  48789175 taatcgttaattctggcaatttacccttgcattgtttaatcatttaaaa 48789127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 9e-48; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 8710894 - 8710754
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||| ||||||||||||||    
T  8710894 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 8710795  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | |||||||| || || |||||||||    
T  8710794 taaaatttcgtcctttgaccaactttatcactgccacgtca 8710754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 28226172 - 28226043
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| |||||| |||||| ||||||||||||    
T  28226172 ttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 28226073  T
Q  148 tttaaaaattcgtcctctcaccaacttaat 177  Q
    ||||||| ||||| || | |||||||||||    
T  28226072 tttaaaatttcgtactttgaccaacttaat 28226043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 15604339 - 15604466
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||| | ||||||||||||||| |||||| |||||| ||||||||||||||    
T  15604339 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 15604438  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | | |||||||||    
T  15604439 taaaatttcgtcctttgatcaacttaat 15604466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 15604762 - 15604625
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    |||||||||||||| |||| |||||||||| |||||||||||| |||||| | ||||||||||||||| |||||| |||||| |||||||||||||||||    
T  15604762 ttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 15604663  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | ||||||||||| || ||| |||||    
T  15604662 aatttcgtcctttgaccaacttaatcactgccccgtca 15604625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 6573543 - 6573655
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| |||| | ||||||||||||||| |||||| |||||| ||||||||||||||    
T  6573543 ggcttaatgatgtgtttcatccctccaattaggcgtcatttaaaaattcgtccatgtaatcgctaatcctggcaatttacccttgaattgtttaatcatt 6573642  T
Q  150 taaaaattcgtcc 162  Q
    |||||||| ||||    
T  6573643 taaaaatttgtcc 6573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 11830365 - 11830504
Alignment:
Q  51 gcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattt 150  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||| | |||| ||||||||| ||||||| |||||| |||||||||||||||    
T  11830365 gcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaattgctaatcctaacaatttacccttgcattgtttaatcattt 11830464  T
Q  151 aaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    |||| |||||| | | || |||| ||| || |||||||||    
T  11830465 aaaatttcgtcatttgacaaactcaatcactgccacgtca 11830504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 53 - 162
Target Start/End: Original strand, 6573050 - 6573158
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||| || ||||||  ||||| |||||||||||||||||    
T  6573050 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaatttgtccatgtaatcgctaatcttggcaattt-accttgcattgtttaatcatttaa 6573148  T
Q  153 aaattcgtcc 162  Q
    ||||||||||    
T  6573149 aaattcgtcc 6573158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 8342602 - 8342465
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||  | |||||  ||||||||||||||| |||||| |||||||||| ||||||    
T  8342602 ttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcaataatcctgacaatttacccttgcattgtttaattatttaa 8342503  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | | ||||||||| || ||| |||||    
T  8342502 aatttcgtcctttgaacaacttaatcactgccgcgtca 8342465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 8342190 - 8342314
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||  | |||| | |||||||| ||||||  ||||| |||||||||||||||||    
T  8342190 ttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtctatgtaattggtaatcctggcaatttatccttgcattgtttaatcatttaa 8342289  T
Q  153 aaattcgtcctctcaccaacttaat 177  Q
    || |||||||| | |||||||||||    
T  8342290 aatttcgtcctttgaccaacttaat 8342314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 41588483 - 41588344
Alignment:
Q  51 gcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattt 150  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||| ||| |||||| | |||  |||||||||||||||    
T  41588483 gcttaataatgtgtttcgtccttacaattaggcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacacttacattgtttaatcattt 41588384  T
Q  151 aaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    |||| ||| |||| | ||||||||||| || |||| ||||    
T  41588383 aaaatttcatcctttgaccaacttaatcactgccaagtca 41588344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 25892393 - 25892506
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||||||||||||| ||  || |||||||| ||||||||||||| |||| | ||||||||||||||| ||| || |||||  |||||||||||||    
T  25892393 tggcttaatgatgtgtttcatctatgaaattaggcttcatttaaaaatttgtccatgtaatcgctaatcctggcaaattacccttccattgtttaatcat 25892492  T
Q  149 ttaaaaattcgtcc 162  Q
    ||||||||||||||    
T  25892493 ttaaaaattcgtcc 25892506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 41587235 - 41587374
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||| |||| | |||||| ||||||||  || || |||||| ||||||||||||||    
T  41587235 ggcttaatgatgtgtttcgtccttgcaattaagagtcatttaaaaattggtcc-tgtaatcgttaatcctggaaaattacccttgcattgtttaatcatt 41587333  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| ||| |||| | ||||||||||| || | |||||||    
T  41587334 taaaatttcatcctttaaccaacttaatcactgtcacgtca 41587374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 36382161 - 36382310
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| ||||||||||  || |||||||||| |||| | |||||||||||||||||||||| |||||| ||||||||||||||    
T  36382161 ggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatcatt 36382260  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| ||| | |||||| || ||||||| || ||||||||| ||||||||    
T  36382261 taaaatttcatccctctc-cccacttaatcactgccacgtcactaatttga 36382310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 15848097 - 15848237
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| |||||||||| |||| | |||||||||||||||  ||||| |||||| ||||||||||||||||||| |||    
T  15848097 atgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttc 15848196  T
Q  159 gt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    || |||||| || ||||||| || ||||||||| ||||||||    
T  15848197 gtccctctc-cccacttaatcactgccacgtcactaatttga 15848237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 64 - 199
Target Start/End: Complemental strand, 44714175 - 44714040
Alignment:
Q  64 tttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cc 162  Q
    |||| ||| |||||||||| ||| ||||||||||||||| | |||| |||||||||| |||||| |||||| ||||||||||||||||||| ||||| ||    
T  44714175 tttcatccttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccc 44714076  T
Q  163 tctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||| || ||||||| || |||| |||| ||||||||    
T  44714075 tctc-cccacttaatcactgccatgtcactaatttga 44714040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 39936665 - 39936535
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||||||||||||||||||||||  ||||||| || |||||| |||||| |||||||| ||| || |||||| |  |||||||||||||||| |||    
T  39936665 atgtgtttcgtccctgcaattaggcgtggtttaaaa-ttggtccttgtaatcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttc 39936567  T
Q  159 gtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| | ||||| ||||| |  |||||||||    
T  39936566 gtcctttgaccaatttaatcaatgccacgtca 39936535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 16099078 - 16099167
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| |||||||||||||| |||| | ||||| ||||||||| |||||| ||| || ||||||||||||||||||| |||||||    
T  16099078 tgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 16099167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 153
Target Start/End: Original strand, 34447813 - 34447916
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| || ||||||| |||||||||||||| |||| | ||||||| |||||||||||||| |||||| |||||||||| |||    
T  34447813 ggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtccctataatcgcaaatcctgacaatttacccttgcattgtttaataatt 34447912  T
Q  150 taaa 153  Q
    ||||    
T  34447913 taaa 34447916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 1695740 - 1695889
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||||||    
T  1695740 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 1695839  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || ||||| | ||||| ||||| || ||||||||| ||||||||    
T  1695840 taaaatttggtcctttgaccaaattaatcactgccacgtcactaatttga 1695889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 164
Target Start/End: Complemental strand, 6589778 - 6589673
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||||||||||||||||| | |||||||||||||| |||| | |||||| |||| ||| ||| || |||||| |  |||||||||||||||| |||    
T  6589778 atgtgtttcgtccctgcaattaagggtcatttaaaaattggtccatgtaatcgttaattctggcaaattacccttgcaaagtttaatcatttaaaatttc 6589679  T
Q  159 gtcctc 164  Q
     |||||    
T  6589678 ctcctc 6589673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 10712732 - 10712872
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| ||||||||||  || |||||||||| |||||| |||||  |||||||| |||||| |||||| ||||||||||||||||||| |||    
T  10712732 atgtatttcatccttgcaattagggttcgtttaaaaattggtccttataatcattaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10712831  T
Q  159 gt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
     | |||||| || ||||||| ||  |||||||| ||||||||    
T  10712832 atccctctc-cccacttaatcactaccacgtcactaatttga 10712872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 11163428 - 11163339
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| ||  || ||||||||||||||||||| |||||||    
T  11163428 tgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacctctgcattgtttaatcatttaaaatttcgtcc 11163339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 14900878 - 14900768
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| |||||||||| ||| |||||||||| |||| | |||| |||||||||| ||||||  ||||||||   |||||||||    
T  14900878 ggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgtat--gttaatcatt 14900781  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  14900780 taaaatttcgtcc 14900768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 202775 - 202672
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||| ||||||| ||||||| |||||||||||||| |||| | |||||| |||||||| ||| ||  ||||| |  |||||||||||||||| |||    
T  202775 atgtgttttgtccctgtaattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagccttgcagagtttaatcatttaaaatttc 202676  T
Q  159 gtcc 162  Q
    ||||    
T  202675 gtcc 202672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 36479741 - 36479867
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc-tctcaccaa 171  Q
    |||||||||| ||| |||||||||| |||| | |||||||||||| |  || ||| |||||| ||||||||||||||||||| ||||||| |||| || |    
T  36479741 tgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgcattgtttaatcatttaaaatttcgtccatctc-ccca 36479839  T
Q  172 cttaataaccgccacgtcagtaatttga 199  Q
    |||||| || |||| |||| ||||||||    
T  36479840 cttaatcactgccatgtcactaatttga 36479867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 25893590 - 25893536
Alignment:
Q  106 taatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt 160  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||    
T  25893590 taatcgctaatcttgacaatttacccttgcattgtttaatcatttaaaaattcgt 25893536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 199
Target Start/End: Complemental strand, 37895719 - 37895626
Alignment:
Q  106 taatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||||||||||||| |||||| | |||| ||||||||||||||||||| ||||| |||||| || ||||||| || ||||||||| ||||||||    
T  37895719 taatcgctaatcctggcaatttacacttgcattgtttaatcatttaaaatttcgtccctctc-cccacttaatcactgccacgtcactaatttga 37895626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 43742095 - 43741997
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaatt 157  Q
    |||| |||||||||||||||| |  |||||||||||||| |||| | |||||  |||||||||||| || |||||| |  |||||||||||||||||||    
T  43742095 atgtatttcgtccctgcaattggaggtcatttaaaaattggtccatgtaatcattaatcctgacaaattacccttgcaaagtttaatcatttaaaaatt 43741997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 2318168 - 2318307
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||  |||||||||| |||  | ||||||||||| ||| |||||| |||||| ||||||||||||||||||| |||    
T  2318168 atgtatttcatccttgcaattagg-gtagtttaaaaattggtctatgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttc 2318266  T
Q  159 gt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    || |||||| || ||||||| |  ||||||||| ||||||||    
T  2318267 gtccctctc-cccacttaattaatgccacgtcactaatttga 2318307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 13995673 - 13995822
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||| ||    
T  13995673 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 13995772  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || ||||| | ||||| ||||| || ||||||||| ||||||||    
T  13995773 taaaatttggtcctttgaccaaattaatcactgccacgtcactaatttga 13995822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 22051383 - 22051310
Alignment:
Q  88 tttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc 161  Q
    ||||||||||||||  | ||||||||||||||  |||||| |||||| ||||||||||||||||||| ||||||    
T  22051383 tttaaaaattagtctctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtc 22051310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27977247 - 27977199
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  27977247 tttgatatgcttcttgatttaatggatgagtgaaaagatttattatgtt 27977199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28063775 - 28063727
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  28063775 tttgatatgcttcttgatttaatggatgagtgaaaagatttattatgtt 28063727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 199
Target Start/End: Original strand, 39423553 - 39423664
Alignment:
Q  88 tttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaacttaataaccgccac 186  Q
    |||||||||| |||  | ||||||||||| ||| ||||||  ||||||||||||||||||||||||| ||||| |||||| || ||||||| || ||||     
T  39423553 tttaaaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcatttaaaatttcgtccctctc-cccacttaatcactgccat 39423651  T
Q  187 gtcagtaatttga 199  Q
    |||| ||||||||    
T  39423652 gtcactaatttga 39423664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 30729619 - 30729734
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  |||| |||| ||| ||||||||| |||| |||||||||| |||| | || |||||||||||  ||| || |||||| ||| |||||||     
T  30729619 ttggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaattgcccttgcattctttaatcg 30729718  T
Q  148 tttaaaaattcgtcct 163  Q
    ||||||| ||||||||    
T  30729719 tttaaaatttcgtcct 30729734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 28228679 - 28228737
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatc 117  Q
    |||||||||||||||||||||||| |||||||||||||| |||| | |||||| |||||    
T  28228679 atgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatc 28228737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 39498336 - 39498422
Alignment:
Q  76 aattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    ||||||| ||| |||||||||| |||| | |||||| |||||||| |||||| ||| |  ||||||||||||||||||| |||||||    
T  39498336 aattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttcgtcc 39498422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 6657901 - 6657990
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    ||||||| || ||| |||||||||| |||| | ||||| |||||| || |||||| ||| || ||||||||||||||||||| |||||||    
T  6657901 tgcaatttggggtcgtttaaaaattggtccctgtaatcactaatcatggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 6657990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 14900496 - 14900565
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    |||||||||||||| || |||| ||||||||||||||||| ||||||| |||| | |||| |||||||||    
T  14900496 ggcttaatgatgtgattagtccttgcaattaggcgtcattcaaaaattcgtccctgtaattgctaatcct 14900565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 28230158 - 28230057
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||||||||||| ||||| | |||||||||||||| |||| | |||||| |||||||  ||| || |||||  |  |||||||||||||||| |||    
T  28230158 atgtgtttcgtccctgtaattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctttcaaagtttaatcatttaaaatttc 28230059  T
Q  159 gt 160  Q
    ||    
T  28230058 gt 28230057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 33062050 - 33062199
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||| ||    
T  33062050 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 33062149  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||| ||||| || ||||||||| ||||||||    
T  33062150 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 33062199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 45556135 - 45556216
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    ||||||||||  || |||||||||| |||| | ||||||||||||||| ||||||  || || |||||||||||||||||||    
T  45556135 tgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttatccctgcattgtttaatcatttaaaa 45556216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 33739703 - 33739815
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||||||    
T  33739703 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 33739802  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  33739803 taaaatttcgtcc 33739815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 199
Target Start/End: Original strand, 36755131 - 36755242
Alignment:
Q  88 tttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc-ctctcaccaacttaataaccgccac 186  Q
    |||||||||| || | | ||| |||||||||| ||||||| |||||  ||||||||||||||||||| |||||| ||||| || ||||||| || | |||    
T  36755131 tttaaaaattggttcatgtaaccgctaatcctaacaatttacccttacattgtttaatcatttaaaatttcgtctctctc-cccacttaatcactgtcac 36755229  T
Q  187 gtcagtaatttga 199  Q
    |||| ||||||||    
T  36755230 gtcactaatttga 36755242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 36755516 - 36755389
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| | ||||||||||||||  |||  |  ||||| | |  |||||||||    
T  36755516 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagccttgcaatcattaatcatt 36755417  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | |||||||||||    
T  36755416 taaaatttcgtcctttgaccaacttaat 36755389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 39935465 - 39935559
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    ||||||||||||| |||||||||| ||  |||||||||| || ||| |||||| |||||||||||| ||  ||||| |  ||||||||||||||||    
T  39935465 atgtgtttcgtcc-tgcaattaggtgtggtttaaaaattggttcttataatcgttaatcctgacaaattatccttgcaaagtttaatcatttaaaa 39935559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 13996070 - 13996000
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| ||||||||||    
T  13996070 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 13996000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 15848425 - 15848367
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| ||||||||    
T  15848425 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttga 15848367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 33062447 - 33062377
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| ||||||||||    
T  33062447 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 33062377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 34448132 - 34448074
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| ||||||||    
T  34448132 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttga 34448074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 3653496 - 3653396
Alignment:
Q  61 gtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt 160  Q
    |||| ||||||||| ||||| | |||||||||||||| |||| | |||||| |||| ||| ||| || |||||| |  |||||||||||||||| |||||    
T  3653496 gtgtgtcgtccctgtaattatgggtcatttaaaaattggtccatgtaatcgttaat-ctggcaaattacccttgcaaagtttaatcatttaaaatttcgt 3653398  T
Q  161 cc 162  Q
    ||    
T  3653397 cc 3653396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 6577674 - 6577593
Alignment:
Q  81 ggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    ||||||||||||||||| |||| | ||||||| ||||||| ||| || |  ||| |||||||||| |||||||||| |||||    
T  6577674 ggcgtcatttaaaaatttgtccctgtaatcgccaatcctggcaaattactattgcattgtttaattatttaaaaatccgtcc 6577593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 13692634 - 13692501
Alignment:
Q  64 tttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcct 163  Q
    |||| ||| |||||||||| ||| |||||||||| |||| | || |||||||||||  |||  |  ||||| | |  |||||||||||||| ||||||||    
T  13692634 tttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcct 13692535  T
Q  164 ctcaccaacttaataaccgccacgtcagtaattt 197  Q
     | ||||||||||| || | ||||||| ||||||    
T  13692534 ttgaccaacttaatcactgtcacgtcactaattt 13692501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 25231257 - 25231164
Alignment:
Q  69 tccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||||||| ||| |||||||||| |||| | || |||||||||||  ||| || |||||| |   ||||||||||||||| |||||||    
T  25231257 tccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatcatttaaaatttcgtcc 25231164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 37895347 - 37895496
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||| | ||| |||||||||| |||| | || |||||||||||  |||  |  ||||| | |  |||||||||    
T  37895347 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 37895446  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| ||| |||| | ||||||||||| || ||||||||| ||||||||    
T  37895447 taaaatttcatcctttgaccaacttaatcactgccacgtcactaatttga 37895496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 199030 - 199090
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    |||||||| |||||||||||||||  |||||||||||||||| | | |||||| |||||||    
T  199030 atgtgtttagtccctgcaattagggatcatttaaaaattagttcctgtaatcgttaatcct 199090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 163
Target Start/End: Original strand, 6588692 - 6588796
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| |||||||||| |||| | || |||||||||||  |||  |  ||||| ||| ||||||||||||||| |||    
T  6588692 atgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaaaatttc 6588791  T
Q  159 gtcct 163  Q
    |||||    
T  6588792 gtcct 6588796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 6658184 - 6658126
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| || ||||| | ||||||||||| || ||||||||| ||||||||    
T  6658184 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttga 6658126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 10713060 - 10713002
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||||||||||||  ||||||| | ||||||||||| || ||||||||| ||||||||    
T  10713060 ttaatcatttaaaatgtcgtcctttgaccaacttaatcactgccacgtcactaatttga 10713002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 11163145 - 11163203
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| || ||||| | ||||||||||| || ||||||||| ||||||||    
T  11163145 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttga 11163203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 16099361 - 16099303
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| || ||||| | ||||||||||| || ||||||||| ||||||||    
T  16099361 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttga 16099303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 33740100 - 33740030
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||||||| | || | |||||||||| |||||||||||| |||| | |||| ||||||||||    
T  33740100 ggcttattgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 33740030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 41248956 - 41248886
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| ||||||||||   || |||||||||||| |||||||||||| |||| | |||| ||||||||||    
T  41248956 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 41248886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 3555250 - 3555363
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||  | || ||| || |||| |||| ||  ||||| ||| ||||||||||    
T  3555250 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgcattctttaatcatt 3555349  T
Q  150 taaaaattcgtcct 163  Q
    ||||| ||||||||    
T  3555350 taaaatttcgtcct 3555363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29046657 - 29046612
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgt 46  Q
    ||||||||||| ||||||||||||||||| |||||| | |||||||    
T  29046657 tttgatatgctccttgatttaatggatgattgaaaatatttattgt 29046612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 22051088 - 22051140
Alignment:
Q  144 atcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    ||||||||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  22051088 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 22051140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 222215 - 222075
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| | | |||||||||||||||||||||| |||||| ||||||||||||||    
T  222215 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 222116  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| || |||| ||||    
T  222115 taaaatttcgtcctttgaccaacttaatcactgccaagtca 222075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 221794 - 221929
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| || ||||||||||||||| |||||| |||||| |||||||||||||||||    
T  221794 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagtc-ttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 221892  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | | ||||||||| || |||||||||    
T  221893 aatttcgtcctttga-caacttaatcactgccacgtca 221929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 35634525 - 35634385
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||| | |||||||||||||||||||||| |||||| ||||||||||||||    
T  35634525 ggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 35634426  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| || | |||||||    
T  35634425 taaaatttcgtcctttaaccaacttaatcactgtcacgtca 35634385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 37542227 - 37542364
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||||||||||||||||    
T  37542227 ttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 37542326  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || ||||| || | ||||||||||| ||||||| ||||    
T  37542327 aatttcgttctttgaccaacttaatcaccgccaagtca 37542364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 15230357 - 15230217
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||| | |||||||||||| ||||||||| |||||| ||||||||||||||    
T  15230357 ggcttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcttgacaatttacccttgcattgtttaatcatt 15230258  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| || |||||||||    
T  15230257 taaaatttcgtcctttgaccaacttaatcactgccacgtca 15230217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 10445758 - 10445621
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||| | ||||||||||||||| |||||| |||||| |||||||||||||||||    
T  10445758 ttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 10445659  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||| | | ||||||||||| || |||||||||    
T  10445658 aatttcgtcttttgaccaacttaatcactgccacgtca 10445621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 15229929 - 15230058
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| | ||||||||||||||| |||||| |||||| ||||||||||||    
T  15229929 ttggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttggattgtttaatca 15230028  T
Q  148 tttaaaaattcgtcctctcaccaacttaat 177  Q
    ||||||| |||||||| | | |||||||||    
T  15230029 tttaaaatttcgtcctttgatcaacttaat 15230058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 8998113 - 8997975
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| | | |||||||||||| ||||||||| |||||| ||||||||||||||||    
T  8998113 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcatgacaatttacccttgcattgtttaatcattta 8998014  T
Q  152 aaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||| | |||||| | ||||||||||| || | |||||||    
T  8998013 aaattccgtcctttgaccaacttaatcactgtcacgtca 8997975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 7983428 - 7983541
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| |||||| |||||| ||||||||||||||    
T  7983428 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 7983527  T
Q  150 taaaaattcgtcct 163  Q
    ||||| ||||||||    
T  7983528 taaaatttcgtcct 7983541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 190
Target Start/End: Original strand, 44664507 - 44664648
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||| ||||||  ||||| |||||||||||||    
T  44664507 tggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgcattgtttaatcat 44664606  T
Q  149 ttaaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    |||||| |||||| | | ||||||||||| || |||||||||    
T  44664607 ttaaaatttcgtcatttgaccaacttaatcactgccacgtca 44664648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 44664932 - 44664807
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||  | |||||||||||||||||||||| |||||| ||||||||||||||||    
T  44664932 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattta 44664833  T
Q  152 aaaattcgtcctctcaccaacttaat 177  Q
    ||| |||||  | | |||||||||||    
T  44664832 aaatttcgttatttgaccaacttaat 44664807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 41353999 - 41353859
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||| | ||| ||||||||||    
T  41353999 ggcttaatgatgtgtttcgtccttataattaggcgtcatttaaaaattagtccctgtaatcactaatcctgacaatttaccctagcattatttaatcatt 41353900  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| |||| |||||||    
T  41353899 taaaatttcgtcctttgaccaacttaatcaccgtcacgtca 41353859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 25124566 - 25124689
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    |||||||||| |||||| | |||||||||||||||||||||||||||||| | ||||||||||||||| |||||| |||||| |||||||||||||||||    
T  25124566 ttaatgatgtatttcgttcttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 25124665  T
Q  153 aaattcgtcctctcaccaacttaa 176  Q
    || |||||||| | ||||||||||    
T  25124666 aatttcgtcctttgaccaacttaa 25124689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 6471693 - 6471830
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||  | ||||||||||||||| |||||| |||||| |||||||||||||||||    
T  6471693 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaatgagtctctataatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 6471792  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||| | | | ||||||||| || |||||||||    
T  6471793 aatttcgtctttttatcaacttaatcactgccacgtca 6471830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 42945537 - 42945400
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||| | | |||||||||||||||||||||| | |||| |||||||||||||||||    
T  42945537 ttaatgatgtgtttcgttcttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaa 42945438  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||| | | ||||||||||| || |||| ||||    
T  42945437 aatttcgtcatttgaccaacttaatcactgccaagtca 42945400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 234166 - 234039
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| | |||| | |||||||| |||||| |||||| ||||||||||||||    
T  234166 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatt 234067  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | | |||||||||    
T  234066 taaaatttcgtcctttgatcaacttaat 234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 710577 - 710450
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| | |||| | |||||||| |||||| |||||| ||||||||||||||    
T  710577 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatt 710478  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | | |||||||||    
T  710477 taaaatttcgtcctttgatcaacttaat 710450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 747789 - 747662
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| | |||| | |||||||| |||||| |||||| ||||||||||||||    
T  747789 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatt 747690  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | | |||||||||    
T  747689 taaaatttcgtcctttgatcaacttaat 747662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 871684 - 871557
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| | |||| | |||||||| |||||| |||||| ||||||||||||||    
T  871684 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcatt 871585  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | | |||||||||    
T  871584 taaaatttcgtcctttgatcaacttaat 871557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 25124989 - 25124849
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||||||||  | ||||||||||| ||| |||||| |||||| ||||||||||||||    
T  25124989 ggcttaatcatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 25124890  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| ||| |||| | | ||||||||| || |||||||||    
T  25124889 taaaatttcatcctttgaacaacttaatcactgccacgtca 25124849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 8997853 - 8997946
Alignment:
Q  47 gttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgt 140  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||| |||||    
T  8997853 gttggtttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgcaatcgctaatcctgacaatttacccttgcattgt 8997946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 41353577 - 41353685
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||   | |||||||||||||| ||||||| |||||| |||||||||||||||||    
T  41353577 ttaatgatatgtttcgtccttacaattaggcgtcatttaaaaattagtttctgtaatcgctaatcctaacaatttacccttgcattgtttaatcatttaa 41353676  T
Q  153 aaattcgtc 161  Q
    || ||||||    
T  41353677 aatttcgtc 41353685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 39071676 - 39071825
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| | |||||||||||||||||||||| |||||| ||||||||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 39071775  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| ||||| |||||| || ||||||| || ||| ||||| ||||||||    
T  39071776 taaaatttcgtccctctc-cccacttaatcactgccgcgtcactaatttga 39071825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 11675091 - 11674942
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  |||||||||    
T  11675091 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 11674992  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||||||||| || ||||||||| ||||||||    
T  11674991 taaaatttggtccttggaccaacttaatcactgccacgtcactaatttga 11674942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 21432695 - 21432804
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||||||  | ||||| |||||  ||||||||| |||||| ||||||||||||||||    
T  21432695 cttaatgatgtgtttcgtccttgcaattagacgtcatataaaaattagtctctgtaatcactaattttgacaatttacccttgcattgtttaatcattta 21432794  T
Q  152 aaaattcgtc 161  Q
    ||| ||||||    
T  21432795 aaatttcgtc 21432804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 199
Target Start/End: Complemental strand, 16388956 - 16388805
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  |||| |||| ||| |||||||||| |||||||||||||| || | | |||| |||||||||| |||||| |||||| ||||||||||||    
T  16388956 ttggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatca 16388857  T
Q  148 tttaaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||||| ||||| |||||| || ||||||| || ||||||||| ||||||||    
T  16388856 tttaaaatttcgtccctctc-cccacttaatcactgccacgtcactaatttga 16388805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 8316993 - 8316904
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||    
T  8316993 tgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 8316904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 40318392 - 40318279
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||  ||||||||||||||| | ||||||||||||||| |||||| |||||| ||||||||||||||    
T  40318392 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 40318293  T
Q  150 taaaaattcgtcct 163  Q
    ||||| ||||||||    
T  40318292 taaaatttcgtcct 40318279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 4995084 - 4994973
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| |||||||||||||| ||||| | ||||||||||||||||||||| |||||| ||||||||||||||    
T  4995084 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtcctgt-aatcgctaatcctgacaatttacccttgcattgtttaatcatt 4994986  T
Q  150 taaaaattcgtcc 162  Q
    | ||| |||||||    
T  4994985 tcaaatttcgtcc 4994973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 13186060 - 13186207
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| ||||||||||  || |||||||||| || | | |||||||||||||||||||||| |||||| ||||||||||||||    
T  13186060 ggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 13186159  T
Q  150 taaaaattcgtc-ctctcaccaacttaataaccgccacgtcagtaattt 197  Q
    ||||| |||||| ||||| || ||||||| || ||||||||| ||||||    
T  13186160 taaaatttcgtctctctc-cccacttaatcactgccacgtcactaattt 13186207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 177
Target Start/End: Complemental strand, 37542648 - 37542524
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||| ||||||||| ||| | ||||||||||||||||||||||| || | | | |||| |||| |||| ||||| |||||| |||||||||||||||||    
T  37542648 ttaataatgtgtttcatccttacaattaggcgtcatttaaaaattggttcctgttatcgttaattctgataatttacccttgcattgtttaatcatttaa 37542549  T
Q  153 aaattcgtcctctcaccaacttaat 177  Q
    || |||||||| | |||||||||||    
T  37542548 aatttcgtcctttgaccaacttaat 37542524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 199
Target Start/End: Original strand, 36928501 - 36928625
Alignment:
Q  75 caattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaact 173  Q
    |||||| | ||| |||||||||| |||  | |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||| |||||| || |||    
T  36928501 caattaagggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctc-cccact 36928599  T
Q  174 taataaccgccacgtcagtaatttga 199  Q
    |||| || ||||||||| ||||||||    
T  36928600 taatcactgccacgtcactaatttga 36928625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 190
Target Start/End: Original strand, 42945158 - 42945254
Alignment:
Q  94 aattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||||||| | |||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||||| | ||||||||||| || |||| ||||    
T  42945158 aattagtccctgtaattgctaatcctgacaatttacccttatattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtca 42945254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 35756606 - 35756731
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaa 171  Q
    |||||||||| |||||||||||||| ||| || ||||| ||||||||||||||||  ||||| ||||||||||||||||||| ||||| |||||| || |    
T  35756606 tgcaattaggggtcatttaaaaattggtc-ttataatcactaatcctgacaatttatccttgaattgtttaatcatttaaaatttcgtccctctc-ccca 35756703  T
Q  172 cttaataaccgccacgtcagtaatttga 199  Q
    |||||| || |||| |||| ||||||||    
T  35756704 cttaatcactgccatgtcactaatttga 35756731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 23698646 - 23698560
Alignment:
Q  76 aattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    ||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||    
T  23698646 aattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 23698560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 6472078 - 6471989
Alignment:
Q  88 tttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaat 177  Q
    ||||||||||||| | | ||||||| |||||||||||||| |||||| ||||||||||||||||||| || ||||| | |||||||||||    
T  6472078 tttaaaaattagttcatgtaatcgccaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtcctttgaccaacttaat 6471989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 23505052 - 23505165
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||| |||| | |||| ||||||| || |||||| |||||| | |  |||||||||    
T  23505052 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccatgtaattgctaatcttggcaatttacccttgcaattgttaatcatt 23505151  T
Q  150 taaaaattcgtcct 163  Q
    ||||| || |||||    
T  23505152 taaaatttggtcct 23505165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 23663919 - 23663830
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||  | ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||    
T  23663919 tgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 23663830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 38003829 - 38003748
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttg 134  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||||  | ||||||||||||||| |||||| ||||||    
T  38003829 ttaatgatgtgtttcgtccttgcaattagtcgtaatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttg 38003748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 2535969 - 2535866
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| ||||||||||||||||||| |||||||||||||| |||| | |||||| |||||||| ||| || |||||  |  |||||||||||||||| |||    
T  2535969 atgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcatttaaaatttc 2535870  T
Q  159 gtcc 162  Q
    ||||    
T  2535869 gtcc 2535866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 195
Target Start/End: Original strand, 8746322 - 8746469
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  ||||||||| |||||||||||||| |||||||||||||  |||  | |||||| ||||| |||||| || |||||| |    |||||||    
T  8746322 ttggcttaagtatgtgtttcctccctgcaattaggggtcatttaaaaatcggtcactgtaatcgttaatcgtgacaaattacccttgcaaaccttaatca 8746421  T
Q  148 tttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaat 195  Q
    ||||||| ||||||   | ||| ||||||| |||||||||||||||||    
T  8746422 tttaaaatttcgtcacttgacccacttaatcaccgccacgtcagtaat 8746469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 38003487 - 38003582
Alignment:
Q  82 gcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaat 177  Q
    |||||||||||||||||||   | |||||||||||  |||||||||  ||||||||||||||||||||||||| ||||| || | |||||||||||    
T  38003487 gcgtcatttaaaaattagtttctgtaatcgctaattatgacaatttaaccttgtattgtttaatcatttaaaatttcgttctttgaccaacttaat 38003582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 186
Target Start/End: Original strand, 39474579 - 39474681
Alignment:
Q  83 cgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaataaccg 182  Q
    |||||||||||||||| | ||| |||||||||||| || |||||| |||||| ||||||||||||||||||| ||||| || | ||||||||||| || |    
T  39474579 cgtcatttaaaaattaattcttgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgt-ctttgaccaacttaatcactg 39474677  T
Q  183 ccac 186  Q
    ||||    
T  39474678 ccac 39474681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 199
Target Start/End: Complemental strand, 36325628 - 36325482
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||| || |||| ||||||||||||||||||||||||| |||  | |||| | |||||||| ||||||  ||||| | |  ||||||||||||    
T  36325628 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtctctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaa 36325529  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    || || |||||   ||||||||||| || ||||||||| ||| ||||    
T  36325528 aatttggtccttggaccaacttaatcactgccacgtcactaacttga 36325482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 187
Target Start/End: Original strand, 11674695 - 11674831
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| |||||||||||||| |||||||||| |||| | |||| | |||||||| ||||||  ||||| | |  |||||||||    
T  11674695 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatt 11674794  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacg 187  Q
    ||||| ||||||| ||| || ||||||| || ||||||    
T  11674795 taaaatttcgtcc-ctctcccacttaatcactgccacg 11674831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 11763095 - 11763030
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaa 124  Q
    |||||||||||||||||||||| |  ||||||||||||| |||||| |||||||||||||||||||    
T  11763095 atgtgtttcgtccctgcaattaaggatcatttaaaaattggtccttgtaatcgctaatcctgacaa 11763030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 12273258 - 12273169
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | |||||| |||||| | |||||| |||||| ||||||||||||||||||| |||||||    
T  12273258 tgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaatcatttaaaatttcgtcc 12273169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 23507853 - 23507740
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||  |||| | |||| |||||||||  |||||| |||||| | |  |||||||||    
T  23507853 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaatacgtccctgtaattgctaatccttgcaatttacccttgcaattgttaatcatt 23507754  T
Q  150 taaaaattcgtcct 163  Q
    ||||| || |||||    
T  23507753 taaaatttggtcct 23507740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 154
Target Start/End: Original strand, 27500092 - 27500193
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    |||||||| |||||||||| ||||||||  |||||||||||||||||||| |  |||||||||| ||||||| || | | || ||||||||||||| |||    
T  27500092 ttaatgatatgtttcgtccttgcaattaaacgtcatttaaaaattagtccatgcaatcgctaattctgacaaattactcatgcattgtttaatcatataa 27500191  T
Q  153 aa 154  Q
    ||    
T  27500192 aa 27500193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 199
Target Start/End: Complemental strand, 31608927 - 31608792
Alignment:
Q  64 tttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cc 162  Q
    |||| ||| |||||||| | ||| |||||||||| |||| | || |||||||||||  |||||| |||||| ||||| ||||||||||||| ||||| ||    
T  31608927 tttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaatttacccttgcattgtctaatcatttaaaatttcgtccc 31608828  T
Q  163 tctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||| || ||||||| || ||||||||| ||||||||    
T  31608827 tctc-cccacttaatcactgccacgtcactaatttga 31608792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 6472442 - 6472395
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaat 96  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6472442 tggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaat 6472395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 42803648 - 42803539
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  |||| |||| ||| |||||||||  ||| |||||||||| |||| | ||||| | |||| || |||||| |||||| ||||||||||||    
T  42803648 ttggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggtccctataatcaccaatcgtggcaatttacccttgcattgtttaatca 42803549  T
Q  148 tttaaaaatt 157  Q
    ||||||||||    
T  42803548 tttaaaaatt 42803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9818274 - 9818226
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||    
T  9818274 tttgatatgcttcttgatttaatggatgagtgaaaagatttatcgtgtt 9818226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21231945 - 21231897
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  21231945 tttgatatgcttcttgatttaatggatgagtgaaaagatttattatgtt 21231897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 36186439 - 36186383
Alignment:
Q  106 taatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||||||||||||||| || ||| ||||||||||||||||||| |||||||    
T  36186439 taatcgctaatcctgacaatttacctttgcattgtttaatcatttaaaatttcgtcc 36186383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42077568 - 42077520
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  42077568 tttgatacgcttcttgatttaatggatgagtgaaaagatttattgtgtt 42077520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 2534693 - 2534807
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  |||| ||||| ||||||||||| | ||| |||||||||| || | | ||||||||||||||  |||  | | |||| ||||||||||||    
T  2534693 ttggcttaaatatgtatttcgaccctgcaattatgggtcgtttaaaaattggtacatgtaatcgctaatccttgcaaactactcttgcattgtttaatca 2534792  T
Q  148 tttaaaaattcgtcc 162  Q
    ||||||| |||||||    
T  2534793 tttaaaatttcgtcc 2534807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 22915748 - 22915682
Alignment:
Q  88 tttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||| |||| | |||||||||||| || |||||| |||||| |||||||||||||||||||    
T  22915748 tttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaa 22915682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 40776049 - 40775935
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||| ||||||||||   || |||||||||||| |||||||||||| |||| | |||| ||||||||||||| |||  || || | |  |||||||    
T  40776049 ttggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 40775950  T
Q  148 tttaaaaattcgtcc 162  Q
    ||||||| |||||||    
T  40775949 tttaaaatttcgtcc 40775935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 34061733 - 34061616
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaac 172  Q
    ||||||||| |||| ||||||||||  ||| | || |||||||||||  ||| || |||||| ||| ||||||||||||||| |||||||| | |||||     
T  34061733 tgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaattgcccttgcattctttaatcatttaaaatttcgtcctttgaccaag 34061634  T
Q  173 ttaataaccgccacgtca 190  Q
    ||||| || |||| ||||    
T  34061633 ttaatcactgccatgtca 34061616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 21433076 - 21432992
Alignment:
Q  93 aaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaat 177  Q
    |||||||||| | |||||| ||||  ||||||||| |||||| |||||||||||||||| ||  ||||||| | |||||||||||    
T  21433076 aaattagtccatgtaatcgttaattttgacaatttacccttgcattgtttaatcatttacaatgtcgtcctttgaccaacttaat 21432992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 36325234 - 36325346
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| | |||||||| ||| |||||||||| |||| | |||| | |||||||| ||||||  ||||| | |  |||||||||    
T  36325234 ggcttaatgatgtgattagtccttacaattaggggtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatt 36325333  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  36325334 taaaatttcgtcc 36325346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 38845696 - 38845584
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||||||    
T  38845696 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 38845597  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  38845596 taaaatttcgtcc 38845584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 8747638 - 8747543
Alignment:
Q  104 tttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||| ||||||||| || || |||||| |    |||||||||||||| |||||||  | ||| ||||||| |||||||||||||||||||||    
T  8747638 tttaatcgttaatcctgaaaaattacccttgcaaacattaatcatttaaaatttcgtcccttaacccacttaatcaccgccacgtcagtaatttga 8747543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 10749927 - 10749852
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttg 134  Q
    ||||||||||||| ||||||||||  ||||||||||||| |||| | |||||| |||||||| ||| || ||||||    
T  10749927 atgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcgttaatcctgtcaaattacccttg 10749852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 1425411 - 1425338
Alignment:
Q  88 tttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||||| | |||| ||||||||| |||||| ||| || ||||||||||||||||||| |||||||    
T  1425411 tttaaaaattggtcctgt-aatcactaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 1425338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 120
Target Start/End: Complemental strand, 2266889 - 2266819
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| ||||||||||    
T  2266889 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 2266819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 23663636 - 23663694
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| ||||||||    
T  23663636 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttga 23663694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 36928813 - 36928755
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| ||||||||    
T  36928813 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttga 36928755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 38955741 - 38955807
Alignment:
Q  88 tttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||| ||| || |||||||||||||||  ||||| ||| || |||||||||||||||||||    
T  38955741 tttaaaaattggtcattgtaatcgctaatcctggtaatttacccctgcattgtttaatcatttaaaa 38955807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 44406864 - 44407006
Alignment:
Q  57 tgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaat 156  Q
    |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||| ||||||| |    
T  44406864 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 44406963  T
Q  157 tcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    | |||||   ||||| ||||| || ||||||||| ||||||||    
T  44406964 tggtccttggaccaaattaatcactgccacgtcactaatttga 44407006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 27500492 - 27500433
Alignment:
Q  62 tgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctga 121  Q
    |||||||||| |||||||| | |||||||||||||| |||| | |||||| |||||||||    
T  27500492 tgtttcgtccttgcaattatgggtcatttaaaaattggtccatgtaatcgttaatcctga 27500433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 44407256 - 44407185
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    |||||||| |||||||||| | || |||||||||||| ||||||||||||  ||| | |||| |||||||||    
T  44407256 ttggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcct 44407185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 2266492 - 2266562
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||  | |||| ||||||||||    
T  2266492 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctg 2266562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 4406089 - 4405976
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||  |||| |||| ||| || ||||||| ||  |||||||||| |||| | || | | |||||||  |||||| |||||| | |||||||||||    
T  4406089 tggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcat 4405990  T
Q  149 ttaaaaattcgtcc 162  Q
    |||||| |||||||    
T  4405989 ttaaaatttcgtcc 4405976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 31873318 - 31873245
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttcccct 132  Q
    |||||||| |||||||||| || | |||||||||||| | ||||||||| ||| ||||| || |||||| ||||    
T  31873318 atgtgtttagtccctgcaaatatgggtcatttaaaaaatggtccttttattcgttaatcttggcaatttgccct 31873245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 34060489 - 34060593
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| ||||||||  |||| |||||||||| |||| | ||||||||||||||  ||| ||  | ||| ||| ||||||||||    
T  34060489 ggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaaattgtcgttgcattctttaatcatt 34060588  T
Q  150 taaaa 154  Q
    |||||    
T  34060589 taaaa 34060593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 38862674 - 38862730
Alignment:
Q  106 taatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    ||||||||||| |||  ||||| || ||| ||||||||||||||||||| |||||||    
T  38862674 taatcgctaatactggtaatttacctttgcattgtttaatcatttaaaatttcgtcc 38862730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 10294566 - 10294694
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| ||||||| ||||||||| ||||||||||||||||||||    
T  10294566 tggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcatgacaatttacccttgtattgtttaatcat 10294665  T
Q  149 ttaaaaattcgtcctctcaccaacttaat 177  Q
    |||||| |||||||| | |||||||||||    
T  10294666 ttaaaatttcgtcctttaaccaacttaat 10294694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 3469200 - 3469340
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| | ||||| ||||||||| |||||| |||||| ||||||||||||||    
T  3469200 ggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctggcaatttacccttgcattgtttaatcatt 3469299  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| || |||||||||    
T  3469300 taaaatttcgtcctttgaccaacttaatcacggccacgtca 3469340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 32306424 - 32306564
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| | | |||||||||||| ||||||||| |||||| ||||||||||||||    
T  32306424 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgacaatttacccttgcattgtttaatcatt 32306523  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| ||  ||||||||    
T  32306524 taaaatttcgtcctttgaccaacttaatcactaccacgtca 32306564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 37778699 - 37778559
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| |||||||||| |||||| |||||| ||||||||||||||    
T  37778699 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 37778600  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| ||| |||| | ||||||||||| || |||||||||    
T  37778599 taaaatttcatcctttgaccaacttaatcactgccacgtca 37778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 40788846 - 40788706
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| |||||| | |||| ||||||||||| ||    
T  40788846 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgtttaatcttt 40788747  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| || |||||||||    
T  40788746 taaaatttcgtcctttgaccaacttaatcactgccacgtca 40788706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 190
Target Start/End: Complemental strand, 29118960 - 29118824
Alignment:
Q  54 taatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaa 153  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||| |||||| || ||| ||||||||||||||||||    
T  29118960 taatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattgcattgtttaatcatttaaa 29118861  T
Q  154 aattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    | |||||||| | ||||||||||| || |||||||||    
T  29118860 atttcgtcctttgaccaacttaatcactgccacgtca 29118824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 13948780 - 13948907
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||| || |||||| |||||| ||||||||||||||    
T  13948780 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatt 13948879  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | |||||||||||    
T  13948880 taaaatttcgtcctttgaccaacttaat 13948907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 190
Target Start/End: Original strand, 29685943 - 29686081
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||  ||||| ||||||||||||||||    
T  29685943 cttaatgatgtatttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttatccttgcattgtttaatcattta 29686042  T
Q  152 aaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||| ||||| || | |||||||| || || |||||||||    
T  29686043 aaatttcgttctttgaccaacttgatcactgccacgtca 29686081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 52032141 - 52032278
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||||||  |||||| |||||| |||||||||||||||||    
T  52032141 ttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 52032240  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | ||||||||||| ||  ||||||||    
T  52032241 aatttcgtcctttgaccaacttaatcactaccacgtca 52032278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 53 - 177
Target Start/End: Complemental strand, 32306847 - 32306723
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||| |||||| |||||| |||||||||||||||||    
T  32306847 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 32306748  T
Q  153 aaattcgtcctctcaccaacttaat 177  Q
    || |||||| | | |||||||||||    
T  32306747 aatttcgtcatttgaccaacttaat 32306723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 52032565 - 52032425
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||| |||| | |||||| ||||||||||||||    
T  52032565 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatatacccttgcattgtttaatcatt 52032466  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| ||| |||| | ||||||||||| ||| ||| ||||    
T  52032465 taaaatttcttcctttgaccaacttaatcaccaccaagtca 52032425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 3469626 - 3469499
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||| | | ||||||||||||||| |||||| |||||| ||||||||||||||    
T  3469626 ggcttaatgatctgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 3469527  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| | |||||| | |||||||||||    
T  3469526 taaaattccgtcctttgaccaacttaat 3469499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 11910701 - 11910826
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| ||| | ||||||||||||||  |||||| |||||| ||||||||||||||||    
T  11910701 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcattta 11910800  T
Q  152 aaaattcgtcctctcaccaacttaat 177  Q
    ||| |||||||| | |||||||||||    
T  11910801 aaatttcgtcctttgaccaacttaat 11910826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 186
Target Start/End: Original strand, 47551493 - 47551629
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||| | ||||||||||| ||| |||||| |||||| ||||||||||||||    
T  47551493 ggcttaatgatgtgtttcgtccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaatactggcaatttacccttgcattgtttaatcatt 47551592  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccac 186  Q
    ||||| ||| |||| | ||||||||||| || |||||    
T  47551593 taaaatttcatcctttgaccaacttaatcactgccac 47551629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 35643865 - 35643991
Alignment:
Q  64 tttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcct 163  Q
    |||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||||||    
T  35643865 tttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccgtgcattgtttaatcatttaaaatttcgtcct 35643964  T
Q  164 ctcaccaacttaataaccgccacgtca 190  Q
     | || |||||||| || |||||||||    
T  35643965 ttgacaaacttaatcactgccacgtca 35643991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 29686364 - 29686239
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||| || ||||| ||||||||| |||||| |||||| ||||||||||||||||    
T  29686364 cttaatgatgtgtttcgtccttgcaattaggcgtcattttaaaattagtcattgtaatcactaatcctggcaatttacccttgcattgtttaatcattta 29686265  T
Q  152 aaaattcgtcctctcaccaacttaat 177  Q
    ||| || ||| | | |||||||||||    
T  29686264 aaattttgtcatttgaccaacttaat 29686239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 3596112 - 3596236
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||  | |||||||||||||||||||||| || ||| ||| |||||||||||||    
T  3596112 ttaatgatgtgtttcgtccttgcaattaggcgtgatttaaaaattagtcaatgtaatcgctaatcctgacaatttacctttgcattatttaatcatttaa 3596211  T
Q  153 aaattcgtcctctcaccaacttaat 177  Q
    || ||||| || | |||||||||||    
T  3596212 aatttcgttctttgaccaacttaat 3596236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 196
Target Start/End: Complemental strand, 33156419 - 33156276
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||| ||||| || |||||| |||||  |||||||||||||||||    
T  33156419 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttcattgtttaatcatttaa 33156320  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    || |||||||   | || ||||||| || ||||||||| |||||    
T  33156319 aatttcgtccctccccccacttaatcactgccacgtcactaatt 33156276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 41421975 - 41422112
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||| | | |||||| ||||| ||||||||| |||||  |||||||||||||||||    
T  41421975 ttaatgatgtgtttcgtccttgcaattaggcgtcagttaaaaattagttcctgtaatcgttaatcttgacaatttacccttacattgtttaatcatttaa 41422074  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||| | | ||||||||||| || | |||||||    
T  41422075 aatttcgtcatttgaccaacttaatcactgtcacgtca 41422112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 4322592 - 4322703
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||| ||||| | |||||||||||||||||| ||  ||||| ||||||||||||||    
T  4322592 ggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcctgt-aatcgctaatcctgacaaattaaccttgcattgtttaatcatt 4322690  T
Q  150 taaaaattcgtcc 162  Q
    |||||||||||||    
T  4322691 taaaaattcgtcc 4322703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 33506376 - 33506252
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||||||| | ||||||||||||||| |||||| | |||  ||||||||||||||    
T  33506376 ggcttaatgatgtgtttcgtcctttcaattaggcgttatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttacattgtttaatcatt 33506277  T
Q  150 taaaaattcgtcctctcaccaactt 174  Q
    ||||| || ||||| | ||||||||    
T  33506276 taaaattttgtcctttgaccaactt 33506252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 10294985 - 10294845
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||| || ||| |||||||||||||| | | ||||||||||||||  |||||| |||||| ||||||||||||||    
T  10294985 ggcttaatgatgtgtttcgtccttgcaatcagacgtaatttaaaaattagttcctgtaatcgctaatcctcgcaatttacccttgcattgtttaatcatt 10294886  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||  | | ||||||||||| || |||| ||||    
T  10294885 taaaatttcgttttttgaccaacttaatcactgccaagtca 10294845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 36314298 - 36314447
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  |||||||||    
T  36314298 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 36314397  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||||||||| || ||||||||| ||||||||    
T  36314398 taaaatttggtccttggaccaacttaatcactgccacgtcactaatttga 36314447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 4323627 - 4323519
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    |||| ||||||||||  ||||||||||||||||| |||||||||| |||| | ||||||||||||||| ||| ||  ||||| |||||||||||||||||    
T  4323627 ttaaggatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaa 4323528  T
Q  153 aaattcgtc 161  Q
    |||||||||    
T  4323527 aaattcgtc 4323519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 40788423 - 40788531
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||| ||| |||||||| |||| |||||||||||||||| | ||||||||||| |||||||||| || ||| ||| |||||||||||||    
T  40788423 ttaatgatgtgtttcttccttgcaattaagcgttatttaaaaattagtccctctaatcgctaattctgacaatttacctttgcattatttaatcatttaa 40788522  T
Q  153 aaattcgtc 161  Q
    || ||||||    
T  40788523 aatttcgtc 40788531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 2796202 - 2796291
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| |||||||||||||| |||| | ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||    
T  2796202 tgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 2796291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 9294387 - 9294274
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| |||||| |||||||||||||    
T  9294387 tggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcat 9294288  T
Q  149 ttaaaaattcgtcc 162  Q
    |||||| |||||||    
T  9294287 ttaaaatttcgtcc 9294274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 29118529 - 29118617
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgt 140  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||| ||| |||||| |||||| |||||    
T  29118529 cttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgt 29118617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 43998148 - 43998272
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||| ||||||| ||  || ||||| | ||||||||||||||||||||| |||||| |||| ||| |||||| |||||| |||||||||||||||||    
T  43998148 ttaatgacgtgtttcatcattgtaattatgtgtcatttaaaaattagtccttgtaatcgttaattctggcaatttacccttgcattgtttaatcatttaa 43998247  T
Q  153 aaattcgtcctctcaccaacttaat 177  Q
    || |||||| | | |||||||||||    
T  43998248 aatttcgtcatttgaccaacttaat 43998272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 10307765 - 10307674
Alignment:
Q  86 catttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaat 177  Q
    ||||||||||||||||  | ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||| | |||||||||||    
T  10307765 catttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaat 10307674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 199
Target Start/End: Original strand, 10770493 - 10770639
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||| || |||| ||||||||||||||||||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  ||||||||||||    
T  10770493 ttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaa 10770592  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    || || |||||   ||||||||||| || ||||| ||| ||||||||    
T  10770593 aatttggtccttggaccaacttaatcactgccacatcactaatttga 10770639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 33154875 - 33154989
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  ||||||||||||| |||||||||| |||||||||||||| |||| | |||||| |||||||||||| ||  |||||||  |||||||||    
T  33154875 ttggcttaagtatgtgtttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctgacaaattatccttgtaaagtttaatca 33154974  T
Q  148 tttaaaaattcgtcc 162  Q
    ||||| |||| ||||    
T  33154975 tttaagaattggtcc 33154989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 177
Target Start/End: Original strand, 47856396 - 47856514
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||||||||||||||||| ||||| |||||||||| |||||| |||||| |||||||||||| || | |||| |  |||||||||||||||| ||     
T  47856396 atgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattactcttgcaaagtttaatcatttaaaatttt 47856495  T
Q  159 gtcctctcaccaacttaat 177  Q
    ||| | | |||||||||||    
T  47856496 gtcatttgaccaacttaat 47856514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 48322377 - 48322526
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| ||||||||| | ||||||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  |||||||||    
T  48322377 ggcttaatgatgtgattagtccttgcaattagacatcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 48322476  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||||||||| || ||||||||| ||||||||    
T  48322477 taaaatttggtccttggaccaacttaatcactgccacgtcactaatttga 48322526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 161
Target Start/End: Complemental strand, 19741297 - 19741209
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc 161  Q
    |||||||||| ||| |||||||||| |||| | |||||||||||| || |||||| |||||||||||||||||||||||||| ||||||    
T  19741297 tgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatcatttaaaatttcgtc 19741209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 42855735 - 42855620
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    ||||||||||||||||||| | || |||||||||||||||||||||||||||||| | || |||||||||||  |||  |  ||||| ||| ||||||||    
T  42855735 ttggcttaatgatgtgtttagcccttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaaactagccttgcattctttaatca 42855636  T
Q  148 tttaaaaattcgtcct 163  Q
    ||||||| ||| ||||    
T  42855635 tttaaaatttcatcct 42855620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 43384321 - 43384394
Alignment:
Q  88 tttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc 161  Q
    |||||||||| |||| | |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  43384321 tttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 43384394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 13949123 - 13949071
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13949123 ttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 13949071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 195
Target Start/End: Complemental strand, 21186114 - 21185978
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||| |||| |||||||||| |||||||||||||| || | | |||||| |||||||| ||| || |||||| |    |||||||||||||| |||    
T  21186114 atgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttgcaaaccttaatcatttaaaatttc 21186015  T
Q  159 gtcctctcaccaacttaataaccgccacgtcagtaat 195  Q
    ||||  | ||| ||||||| |||||||||||||||||    
T  21186014 gtcccttgacccacttaatcaccgccacgtcagtaat 21185978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 33506180 - 33506244
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaat 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| | | |||||||||||    
T  33506180 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctataatcgctaat 33506244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 196
Target Start/End: Complemental strand, 33689784 - 33689661
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaa 171  Q
    |||||||||| ||| |||||||||| || | | ||||||||||||||| |||||| |||||| ||| ||||||||||||||| ||||| |||||| || |    
T  33689784 tgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtccctctc-ccca 33689686  T
Q  172 cttaataaccgccacgtcagtaatt 196  Q
    |||||| || ||||||||| |||||    
T  33689685 cttaatcactgccacgtcactaatt 33689661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 6956257 - 6956360
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    ||||||||||||||||||||||||  |||||||||||||||||| | |||||| |||||||| ||| || |||||| |   || |||||||||||| |||    
T  6956257 atgtgtttcgtccctgcaattagggatcatttaaaaattagtccctataatcgttaatcctggcaaattacccttgcaaacttaaatcatttaaaatttc 6956356  T
Q  159 gtcc 162  Q
    ||||    
T  6956357 gtcc 6956360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 23458407 - 23458258
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||| | ||| |||||||||| |||  | ||||||||||||||  |||||| |||||| ||||||||||||||    
T  23458407 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatcatt 23458308  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| ||||| |||||| || ||||||| || ||||| ||| ||||||||    
T  23458307 taaaatttcgtccctctc-cccacttaatcactgccacatcactaatttga 23458258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 36314697 - 36314583
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||||||||| || |||| |||||||||||||| |||||||||| |||| | |||| | |||||||| ||||||  ||||| | |  |||||||    
T  36314697 ttggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatca 36314598  T
Q  148 tttaaaaattcgtcc 162  Q
    ||||||| |||||||    
T  36314597 tttaaaatttcgtcc 36314583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 51994291 - 51994174
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaa 171  Q
    ||||||||||  || |||||||||| |||||| ||||||||||| ||| |||||| ||| || ||||||||||||||||||| ||||| |||||| || |    
T  51994291 tgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctc-ccca 51994193  T
Q  172 cttaataaccgccacgtca 190  Q
    |||||| || |||||||||    
T  51994192 cttaatcactgccacgtca 51994174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 199
Target Start/End: Original strand, 40758145 - 40758293
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| |||  | ||||||||||||    
T  40758145 ttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctg-caatttaccc--gcattgtttaatca 40758241  T
Q  148 tttaaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||||| ||||| |||||| || ||||||| ||  |||||||| ||||||||    
T  40758242 tttaaaatttcgtccctctc-cccacttaatcactaccacgtcactaatttga 40758293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 42342791 - 42342903
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| | |||||||| ||| |||||||||| |||| | |||| |||| ||||| |||||| |||||| ||||||||||||||    
T  42342791 ggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtccatgtaattgctagtcctggcaatttacccttgcattgtttaatcatt 42342890  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  42342891 taaaatttcgtcc 42342903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 48322774 - 48322662
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| |||||||||||||| |||||||||| |||| | |||| | |||||||| ||||||  ||||| | |  |||||||||    
T  48322774 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatt 48322675  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  48322674 taaaatttcgtcc 48322662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 1079640 - 1079537
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    ||||||||| |||||||||||||| |||||||||||||| |||| | |||||| |||||||| ||| ||  ||||| |  |||||||| ||||||| |||    
T  1079640 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcttttaaaatttc 1079541  T
Q  159 gtcc 162  Q
    ||||    
T  1079540 gtcc 1079537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 10770885 - 10770776
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||| || |||| | ||||||||||||||||||||||| |||| | |||| | |||||||| ||||||  ||||| | |  ||||||||||||    
T  10770885 ttaatgatgtgattagtccttacaattaggcgtcatttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaa 10770786  T
Q  153 aaattcgtcc 162  Q
    || |||||||    
T  10770785 aatttcgtcc 10770776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15990266 - 15990218
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  15990266 tttgatatgcttcttgatttaatggatgagtgaaaagaattattatgtt 15990218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 25107213 - 25107325
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  ||||||||| |||||||||||||| |||||||||||||| |||  | ||||||||||||||| ||| || ||| || |    |||||||||    
T  25107213 ggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaaattgcccctgcaaatgttaatcatt 25107312  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  25107313 taaaatttcgtcc 25107325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 154
Target Start/End: Complemental strand, 40033884 - 40033780
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| ||   | |||| |||||||||| |||||| |||||| ||||||||||||||    
T  40033884 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgcattgtttaatcatt 40033785  T
Q  150 taaaa 154  Q
    |||||    
T  40033784 taaaa 40033780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 43607789 - 43607849
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    |||||||||||||||||||||| |||||||||||||||| |||| | |||||| |||||||    
T  43607789 atgtgtttcgtccctgcaattaagcgtcatttaaaaattggtccctgtaatcgttaatcct 43607849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 23276402 - 23276343
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcc 118  Q
    ||||||||| |||||||||||||| |||||||||||||| |||| | |||||||||||||    
T  23276402 atgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcc 23276343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 32431611 - 32431508
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| ||||||||||| ||||||| |||||||||||||| |||| |  ||||| |||||||||||| ||  ||||| |  |||||| ||||||||| |||    
T  32431611 atgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttgcaaagtttaaccatttaaaatttc 32431512  T
Q  159 gtcc 162  Q
    ||||    
T  32431511 gtcc 32431508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 26463962 - 26463877
Alignment:
Q  114 aatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||| ||||||||| |||||||||||||||||||||||||| ||||| |||||| || ||||||| || | ||||||| ||||||||    
T  26463962 aatcttgacaatttacccttgtattgtttaatcatttaaaatttcgtccctctc-cccacttaatcactgtcacgtcactaatttga 26463877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 46474838 - 46474919
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||| ||| |||||||||| |||  | |||||||||||| || |||||| || ||| |||||||||||||||||||    
T  46474838 tgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcttggcaatttaccattgcattgtttaatcatttaaaa 46474919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 8041616 - 8041728
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||||||    
T  8041616 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 8041715  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  8041716 taaaatttcgtcc 8041728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 23457988 - 23458128
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||| | ||| |||||||||| |||| | || |||||||||||  |||  |  ||||| | |  |||||||||||||| |||    
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttc 23458087  T
Q  159 gtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| | ||||||||||| || ||||||||| ||||||||    
T  23458088 gtcctttgaccaacttaatcactgccacgtcactaatttga 23458128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 1078546 - 1078648
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||||||| |||||||||| |||||||||||||| |||| | |||||| ||||| ||  || ||  |||||||  |||||||||||||||| |||    
T  1078546 atgtttttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatc-tggtaaattaaccttgtaaagtttaatcatttaaaatttc 1078644  T
Q  159 gtcc 162  Q
    ||||    
T  1078645 gtcc 1078648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 161
Target Start/End: Complemental strand, 40506207 - 40506104
Alignment:
Q  59 atgtgtttcgtccctgcaatta-ggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaatt 157  Q
    |||| |||| ||| |||||||| || ||||||||||| || || | | |||||| ||||||||||||||| |||||  ||| ||||||||||||||| ||    
T  40506207 atgtatttcatccttgcaattatggggtcatttaaaagttggttcctgtaatcgttaatcctgacaatttacccttacattatttaatcatttaaaattt 40506108  T
Q  158 cgtc 161  Q
    ||||    
T  40506107 cgtc 40506104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 47857664 - 47857533
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||||||||||| ||||||| ||| ||||||||||  || || |||||| |||| |||  || ||  ||||| |  |||||||||||||||| |||    
T  47857664 atgtgtttcgtccctgtaattaggtgtcgtttaaaaattgatctttgtaatcgttaattctggtaaattatccttgcaaagtttaatcatttaaaatttc 47857565  T
Q  159 gtcctctcaccaacttaataaccgccacgtca 190  Q
    ||| | | ||||||||||| |  |||||||||    
T  47857564 gtcatttgaccaacttaatcaatgccacgtca 47857533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 9368720 - 9368619
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||||||| |||||||||| ||| |||||||||| |||| | |||||  |||||||  ||| || | |||  ||||||||||||||||||| |||    
T  9368720 atgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatcattaatccttgcaaattactcttacattgtttaatcatttaaaatttc 9368621  T
Q  159 gt 160  Q
    ||    
T  9368620 gt 9368619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 25108514 - 25108453
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    ||||||||| |||||||||||||| ||||||||||| || |||| | |||| ||||||||||    
T  25108514 atgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgctaatcctg 25108453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 3596486 - 3596432
Alignment:
Q  63 gtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcc 118  Q
    ||||||||| ||||||||||||| |||||||||||||| ||| |||||| ||||||    
T  3596486 gtttcgtccttgcaattaggcgtgatttaaaaattagt-cttgtaatcgttaatcc 3596432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 46475118 - 46475063
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  46475118 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 46475063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 199
Target Start/End: Complemental strand, 54466822 - 54466671
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||| ||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| | |||||||| || |||  || || | |  ||||||     
T  54466822 ttggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattggtaatcctggcattttaaccctgcaattgttaatcg 54466723  T
Q  148 tttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||||| || |||||   ||||| ||||| || ||||||||| ||||||||    
T  54466722 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 54466671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 26479079 - 26479145
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaat 125  Q
    |||||||| |||||||||| |||| || ||||||||| | |||| | |||||| |||||||||||||    
T  26479079 atgtgtttagtccctgcaaataggggtgatttaaaaaatggtccatgtaatcgttaatcctgacaat 26479145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52641428 - 52641386
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttat 43  Q
    ||||||||||||||||| | |||||||||||||||||| ||||    
T  52641428 tttgatatgcttcttgactcaatggatgagtgaaaagatttat 52641386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 55052370 - 55052428
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| || ||||| | ||||||||||| || ||||||||| ||||||||    
T  55052370 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttga 55052428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 55052638 - 55052564
Alignment:
Q  88 tttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| |||| | |||||| ||||| || |||||| ||  || ||||||||||||||||||| |||||||    
T  55052638 tttaaaaattggtccatgtaatcgttaatcatggcaatttacctctgcattgtttaatcatttaaaatttcgtcc 55052564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 29118624 - 29118665
Alignment:
Q  136 attgtttaatcatttaaaaattcgtcctctcaccaacttaat 177  Q
    ||||||||||||||||||| |||||||| | |||||||||||    
T  29118624 attgtttaatcatttaaaatttcgtcctttgaccaacttaat 29118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 53756767 - 53756856
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| ||||||||||  | | | |||||| ||||| |   ||||| |||||| ||||||||||||||||||| |||||||    
T  53756767 tgcaattaggggtcgtttaaaaattgattcatgtaatcgttaatcttagtaatttacccttgcattgtttaatcatttaaaatttcgtcc 53756856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29453706 - 29453753
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    ||||||||||||||||||| | |||||||||||||||| ||||| ||||    
T  29453706 tttgatatgcttcttgattca-tggatgagtgaaaagatttattatgtt 29453753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 36150536 - 36150604
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaattt 127  Q
    |||| |||| ||| |||||||||| ||| |||||||||| |||||| || | | |||||||||||||||    
T  36150536 atgtatttcatccttgcaattaggggtcgtttaaaaattggtccttatatttgttaatcctgacaattt 36150604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 41558301 - 41558241
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    |||| |||| |||||||||||||| ||| ||||||||||| ||| | || |||||||||||    
T  41558301 atgtatttcatccctgcaattaggggtcgtttaaaaattaatccatgtattcgctaatcct 41558241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 49955773 - 49955633
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||| |||||||| |||||| |||||| ||||||||||||||    
T  49955773 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 49955674  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||||||||| ||||||| ||||    
T  49955673 taaaatttcgtcctttgaccaacttaatcaccgccaagtca 49955633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 40714444 - 40714584
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||| |||||| |||||| ||||||||||||||    
T  40714444 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 40714543  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||| | | ||||||||||| || |||||||||    
T  40714544 taaaatttcgtcatttgaccaacttaatcactgccacgtca 40714584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 46 - 186
Target Start/End: Original strand, 49955343 - 49955483
Alignment:
Q  46 tgttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaat 145  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||| ||||||||||    
T  49955343 tgttggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaat 49955442  T
Q  146 catttaaaaattcgtcctctcaccaacttaataaccgccac 186  Q
    ||||||||| || ||||| | ||||||||||| || |||||    
T  49955443 catttaaaattttgtcctttgaccaacttaatcactgccac 49955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 40714869 - 40714742
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| |||||| || ||| ||||||||||||||    
T  40714869 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacctttgcattgtttaatcatt 40714770  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | |||||||||||    
T  40714769 taaaatttcgtcctttgaccaacttaat 40714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 53 - 177
Target Start/End: Complemental strand, 35041037 - 35040913
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| || |||||| |||||||||||||||||||| | |||||||||||||||||||||| |||||| |||||||||||||||||    
T  35041037 ttaatgatgtgtttcgtccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 35040938  T
Q  153 aaattcgtcctctcaccaacttaat 177  Q
    || |||||||| | |||||||||||    
T  35040937 aatttcgtcctttgaccaacttaat 35040913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 20760931 - 20760804
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||  | ||||||||||||||| |||||| |||||| ||||||||||||||    
T  20760931 ggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 20760832  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | |||||||||||    
T  20760831 taaaatttcgtcctttgaccaacttaat 20760804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 37929418 - 37929545
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||| |||||  ||| ||||||||||    
T  37929418 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgttatcgctaatcctgacaatttacccttacattatttaatcatt 37929517  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | |||||||||||    
T  37929518 taaaatttcgtcctttgaccaacttaat 37929545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 17188953 - 17189065
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| |||||| |||||| ||| |||||||||    
T  17188953 tggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcat 17189052  T
Q  149 ttaaaaattcgtc 161  Q
    |||||| ||||||    
T  17189053 ttaaaatttcgtc 17189065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 45750268 - 45750128
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||  |||||| | |||| ||||||||||||||    
T  45750268 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctagcaatttactcttgcattgtttaatcatt 45750169  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| ||| || | | ||||||||||| || |||||||||    
T  45750168 taaaatttcatcatttgaccaacttaatcactgccacgtca 45750128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 31050950 - 31051077
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||  | ||||||||||||||| |||||| || ||| ||||||||||||||    
T  31050950 ggcttaatgatgtgtttcgtccttgcaattaggcgttatttaaaaattagtctctgtaatcgctaatcctggcaatttacctttgcattgtttaatcatt 31051049  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | |||||||||||    
T  31051050 taaaatttcgtcctttgaccaacttaat 31051077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 45749842 - 45749969
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||| || |||||| ||||||||||||||| | |||| ||||||||||||||    
T  45749842 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctgacaatttacacttgcattgtttaatcatt 45749941  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | || ||||||||    
T  45749942 taaaatttcgtcctttgacaaacttaat 45749969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 17189277 - 17189171
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||| |||||| |||||| ||||||||||||||    
T  17189277 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 17189178  T
Q  150 taaaaat 156  Q
    |||||||    
T  17189177 taaaaat 17189171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 8898517 - 8898657
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||| |||  ||||| | |||||||||||||||||||    
T  8898517 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaattctggtaatttactcttgtattgtttaatcatt 8898616  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||||| | ||||| ||||| || | |||||||    
T  8898617 taaaatttcgtcctttgaccaatttaatcactgtcacgtca 8898657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 8898943 - 8898816
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||  | ||||| ||||| |||||||||| |||||| ||||||||||||||    
T  8898943 ggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcactaatactgacaatttacccttgcattgtttaatcatt 8898844  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||| | | |||||||||||    
T  8898843 taaaatttcgtcatttgaccaacttaat 8898816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 12906085 - 12905958
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||| | | |||||||||||||||||| | ||||||||||||||| |||||| |||||| ||||||||||||||    
T  12906085 ggcttaatgatgtgtttcgtccttgcaatttgacatcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 12905986  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||| | | |||||||||||    
T  12905985 taaaatttcgtcatttgaccaacttaat 12905958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 28324805 - 28324944
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||| ||||| | | |||||||||||||||||||||| |||||| ||| ||||||||||    
T  28324805 ggcttaatgatgtgtttcctccttgcaattaggcgtcgtttaaaa-ttagttcatgtaatcgctaatcctgacaatttacccttgcattatttaatcatt 28324903  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||| | | ||||||||||| || |||||||||    
T  28324904 taaaatttcgtcttttgaccaacttaatcactgccacgtca 28324944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 7820954 - 7821103
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| ||||| ||||||||| | |||||||||||||| ||||||| |||||| ||||||||||||||    
T  7820954 ggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaatttacccttgcattgtttaatcatt 7821053  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| |||||||| | |||||| |||| || ||||||||| ||||||||    
T  7821054 taaaatttcgtcctttgaccaacgtaatcactgccacgtcactaatttga 7821103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 159
Target Start/End: Original strand, 30326496 - 30326605
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||| |||  ||||| |||||| ||||||||||||||    
T  30326496 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttacccttgcattgtttaatcatt 30326595  T
Q  150 taaaaattcg 159  Q
    ||||| ||||    
T  30326596 taaaatttcg 30326605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 32558533 - 32558420
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    ||||||||||||||||| |||| | ||||||| |||||||||||||||||| | | |||||||||||||||| ||||| |||||||| ||||||||||||    
T  32558533 ggcttaatgatgtgttttgtccttacaattagacgtcatttaaaaattagttcctataatcgctaatcctgataatttacccttgtaatgtttaatcatt 32558434  T
Q  150 taaaaattcgtcct 163  Q
    ||||| ||||||||    
T  32558433 taaaatttcgtcct 32558420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 31058483 - 31058343
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||||||  | |||||| ||||| || |||||| |||||| ||||||||||||||    
T  31058483 ggcttaatgatgtgtttcgtccttgcaattagacatcatttaaaaattagtcaatgtaatcgataatcttggcaatttacccttgcattgtttaatcatt 31058384  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||  | | ||||||||||| || |||||||||    
T  31058383 taaaatttcgtattttgaccaacttaatcactgccacgtca 31058343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 199
Target Start/End: Original strand, 6367560 - 6367711
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| |||||| ||||||||||||    
T  6367560 ttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 6367659  T
Q  148 tttaaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||||| ||||| |||||| || ||||||| || ||||||||| ||||||||    
T  6367660 tttaaaatttcgtccctctc-cccacttaatcactgccacgtcactaatttga 6367711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 28325229 - 28325103
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||| | | |||||| ||||  || |||||| |||||| ||||||||||||||    
T  28325229 ggcttaatgatgtgtttcggccttgcaattaggcgtcatttaaaaattagt-catgtaatcgttaattatggcaatttacccttgcattgtttaatcatt 28325131  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||| | | |||||||||||    
T  28325130 taaaatttcgtcttttgaccaacttaat 28325103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 34464447 - 34464595
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| | |||||||||||| || |||||| |||||| | ||||||||||    
T  34464447 ttggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatca 34464546  T
Q  148 tttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    ||||||| |||||| | | ||||||||||| || ||||||||| |||||    
T  34464547 tttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaatt 34464595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 154
Target Start/End: Complemental strand, 44523562 - 44523460
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||| |   | |||||||||||| || |||||| |||||| ||||||||||||||||    
T  44523562 cttaatgatgtgtttcgtccttgcaattaggcctcatttaaaaattaatatctataatcgctaatcatggcaatttacccttgcattgtttaatcattta 44523463  T
Q  152 aaa 154  Q
    |||    
T  44523462 aaa 44523460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 7371293 - 7371430
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    |||||||| |||||||||| |||||||||| |||||||||||||||||   | |||||||| || |||  |||||  ||||| |||||||||| ||||||    
T  7371293 ttaatgatatgtttcgtccttgcaattaggtgtcatttaaaaattagtttctgtaatcgctgattctggtaatttatccttgcattgtttaattatttaa 7371392  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | ||||||||||| || |||||||||    
T  7371393 aatttcgtcctttgaccaacttaatcactgccacgtca 7371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 24905167 - 24905316
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||| |||| | |||| |||||||||  ||||||  ||||| | |  |||||||||    
T  24905167 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatt 24905266  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||||||||| || ||||||||| ||||||||    
T  24905267 taaaatttggtccttggaccaacttaatcactgccacgtcactaatttga 24905316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 28011765 - 28011616
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  |||||||||    
T  28011765 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 28011666  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||||||||| || | ||||||| ||||||||    
T  28011665 taaaatttggtccttggaccaacttaatcactgtcacgtcactaatttga 28011616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 25885419 - 25885356
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgct 113  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  25885419 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgct 25885356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 13914486 - 13914346
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||  ||  |||||||||| |||| | ||||||||||||||| |||||| |||||||||||||||||||||||||| |||    
T  13914486 atgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcatttaaaatttc 13914387  T
Q  159 gt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    || |||||| || ||| ||| || ||||||||| ||||||||    
T  13914386 gtccctctc-cccactaaatcactgccacgtcactaatttga 13914346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 35038458 - 35038595
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||| ||||||||||||| |||||||| | ||||||||||||||  ||| | |||||| |||||||  ||| || |  |||||||||||||||||||||    
T  35038458 ttaataatgtgtttcgtccttgcaattaagggtcatttaaaaattgatccatgtaatcgttaatcctagcaaattacttttgtattgtttaatcatttaa 35038557  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | ||||||| ||| || |||||||||    
T  35038558 aatttcgtcctttgaccaactcaatcactgccacgtca 35038595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 40772506 - 40772619
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||  |||| |||| ||| |||||||| | ||| |||||||||| |||| | |||||||||||||||||||||| | |||| |||||||||||||    
T  40772506 tggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcat 40772605  T
Q  149 ttaaaaattcgtcc 162  Q
    |||||| |||||||    
T  40772606 ttaaaatttcgtcc 40772619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 46163056 - 46163141
Alignment:
Q  76 aattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc 161  Q
    ||||||| ||| |||||||||| |||| | |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  46163056 aattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtc 46163141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 23209755 - 23209643
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||||| ||||||||||||||| |||||| |||||| |||||| |||||||    
T  23209755 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgttcaatcatt 23209656  T
Q  150 taaaaattcgtcc 162  Q
    || || |||||||    
T  23209655 tacaatttcgtcc 23209643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 36694676 - 36694565
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||  |||||||||| |||  | |||||||||||||||||||||| |||||| ||||||||||||||    
T  36694676 ggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 36694577  T
Q  150 taaaaattcgtc 161  Q
    ||||| ||||||    
T  36694576 taaaatttcgtc 36694565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 36710777 - 36710666
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||  |||||||||| |||  | |||||||||||||||||||||| |||||| ||||||||||||||    
T  36710777 ggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 36710678  T
Q  150 taaaaattcgtc 161  Q
    ||||| ||||||    
T  36710677 taaaatttcgtc 36710666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 17662278 - 17662129
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| ||||||| || ||| |||||||||| || | |||||||| |||||||| |||||| |||||| ||||||||||||||    
T  17662278 ggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcatt 17662179  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| ||||| |||||  || ||||||| || ||||||||| ||||||||    
T  17662178 taaaatttcgtccctct-tcccacttaatcactgccacgtcactaatttga 17662129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 26024446 - 26024535
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||  | ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||    
T  26024446 tgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaagttcgtcc 26024535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 41098756 - 41098837
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||| ||| |||||||||| |||  | |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  41098756 tgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaa 41098837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 199
Target Start/End: Complemental strand, 24009955 - 24009820
Alignment:
Q  64 tttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cc 162  Q
    |||| ||| ||||||||||  || |||||||||| ||| || ||||||| ||||||| |||||| |||||| ||||||||||||||||||| ||||| ||    
T  24009955 tttcatccttgcaattagggatcgtttaaaaattggtcattgtaatcgccaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccc 24009856  T
Q  163 tctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||| || ||||||| || ||||| ||| ||||||||    
T  24009855 tctc-cccacttaatcactgccacatcactaatttga 24009820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 32917283 - 32917409
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc-ctctcaccaa 171  Q
    ||||||||||  || |||||||||| |||| | |||||||||||||||||| ||| | |||| ||||||||||||||||||| |||||| ||||| || |    
T  32917283 tgcaattaggaatcgtttaaaaattggtccctgtaatcgctaatcctgacagtttactcttgcattgtttaatcatttaaaatttcgtctctctc-ccca 32917381  T
Q  172 cttaataaccgccacgtcagtaatttga 199  Q
    |||||| || ||||| ||| ||||||||    
T  32917382 cttaatcactgccacatcactaatttga 32917409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 40210775 - 40210649
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaa 171  Q
    |||||||||| | | |||||||||| ||| || ||||||||||| ||| |||||| |||||| ||||||||||||||||||| ||||| |||||| || |    
T  40210775 tgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctc-ccca 40210677  T
Q  172 cttaataaccgccacgtcagtaatttga 199  Q
    |||||| || ||||||||| ||| ||||    
T  40210676 cttaatcactgccacgtcactaaattga 40210649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 37578620 - 37578471
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| ||||||| || ||| |||||||||| ||  || ||||||||||||||| |||||| |||||  |||| |||||||||    
T  37578620 ggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatcatt 37578521  T
Q  150 taaaaattcgtc-ctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| |||||| ||||| || ||||||| || ||||||||| ||||||||    
T  37578520 taaaatttcgtcactctc-cccacttaatcactgccacgtcactaatttga 37578471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 14878994 - 14879083
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| || | | |||||||||||| || |||||| |||||| ||||||||||||||||||| |||||||    
T  14878994 tgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 14879083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31654671 - 31654623
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31654671 tttgatatgcttcttgatttaatggatgagtgaaaagatttattgtgtt 31654623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 198
Target Start/End: Original strand, 42248482 - 42248621
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||  ||| |||||||||| ||| || || ||||||||| || |||||| |||||| ||||||||||||||||||| |||    
T  42248482 atgtatttcatccttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgcattgtttaatcatttaaaatttc 42248581  T
Q  159 gt-cctctcaccaacttaataaccgccacgtcagtaatttg 198  Q
    || |||||| || ||||||| || ||||||| | |||||||    
T  42248582 gtccctctc-cccacttaatcactgccacgtgactaatttg 42248621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 1841482 - 1841608
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc-ctctcaccaa 171  Q
    |||||||| | ||| |||||||||| |||    |||||||||||||||||||||| |||||  ||||||||||||||||||| |||||| ||||| || |    
T  1841482 tgcaattaagagtcgtttaaaaattggtctccgtaatcgctaatcctgacaatttacccttacattgtttaatcatttaaaatttcgtcactctc-ccca 1841580  T
Q  172 cttaataaccgccacgtcagtaatttga 199  Q
    |||||| || |||| |||| ||||||||    
T  1841581 cttaatcactgccatgtcactaatttga 1841608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 4960563 - 4960689
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaa 171  Q
    |||||||||| ||| ||||||||||  || || || |||||||||||  |||||| |||||| ||||||||||||||||||| ||||| |||||  || |    
T  4960563 tgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtccctct-tccca 4960661  T
Q  172 cttaataaccgccacgtcagtaatttga 199  Q
    |||||| || ||||||||| ||||||||    
T  4960662 cttaatcactgccacgtcactaatttga 4960689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 7371595 - 7371529
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaat 116  Q
    ||||||| |||||||||||||| ||||||||| |||||||||||||||||||  | |||||||||||    
T  7371595 ggcttaacgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtctctgtaatcgctaat 7371529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 34464877 - 34464728
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||  |||||||||| |||| | |||||||||||| || |||||| |||||| | ||||||||||||    
T  34464877 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatt 34464778  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || || |||||| || ||||||| || |||| |||| ||||||||    
T  34464777 taaaattttgtccctctc-cccacttaatcactgccatgtcactaatttga 34464728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 25647907 - 25647996
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | |||||| |||||||| |||||| ||| || ||| ||||||||||||||| |||||||    
T  25647907 tgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatcatttaaaatttcgtcc 25647996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 1103517 - 1103573
Alignment:
Q  106 taatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||    
T  1103517 taatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 1103573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 35152343 - 35152447
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||  ||| |||||||||| |||| | ||||||||||| ||| |||||| |||||  ||||||||||||||    
T  35152343 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctataatcgctaatactgccaatttacccttacattgtttaatcatt 35152442  T
Q  150 taaaa 154  Q
    |||||    
T  35152443 taaaa 35152447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 51443622 - 51443574
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  51443622 tttgatatgcttcttgatttaatggatgagtgaaaagatttattatgtt 51443574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 199
Target Start/End: Original strand, 13914082 - 13914217
Alignment:
Q  64 tttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcct 163  Q
    |||| ||| |||||||||| ||| ||||||||||||||| | || |||||||||||  ||| ||   |||| | |  |||||||||||||| ||||||||    
T  13914082 tttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaaatttcgtcct 13914181  T
Q  164 ctcaccaacttaataaccgccacgtcagtaatttga 199  Q
     | ||||||||||| ||  |||||||| ||||||||    
T  13914182 ttgaccaacttaatcactaccacgtcactaatttga 13914217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 44522147 - 44522254
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  ||||||||||||||||||||||||  ||||||||||||| | || | |||||| |||||||  ||| ||  |||||||  |||||||||||    
T  44522147 ggcttaagtatgtgtttcgtccctgcaattagggatcatttaaaaattggaccctgtaatcgttaatcctagcaaattatccttgtaaagtttaatcatt 44522246  T
Q  150 taaaaatt 157  Q
    ||| ||||    
T  44522247 taagaatt 44522254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 43758878 - 43758971
Alignment:
Q  106 taatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||||||||| |||||||||| | |||| ||||||||||||||||||| ||||| |||||| || ||||||| || |||| |||| ||||||||    
T  43758878 taatcgctaattctgacaatttactcttgcattgtttaatcatttaaaatttcgtccctctctcc-acttaatcactgccatgtcactaatttga 43758971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 6367990 - 6367841
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||| | ||| |||||||||| |||| | || |||||||||||  |||  |  ||||| | |  |||||||||    
T  6367990 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 6367891  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| |||||||| | ||||||||||| || ||||||||| ||||||||    
T  6367890 taaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttga 6367841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 162
Target Start/End: Original strand, 30711326 - 30711439
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||  |||| |||| ||| |||||||||| ||  ||||||||||  ||  | ||||||||||||||  ||||||  ||||| |||||||||||||    
T  30711326 tggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatctctataatcgctaatcctagcaatttatccttgcattgtttaatcat 30711425  T
Q  149 ttaaaaattcgtcc 162  Q
    |||||| |||||||    
T  30711426 ttaaaatttcgtcc 30711439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 17691228 - 17691331
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||||||| | ||| |||| ||| |||||||||| |||| | ||||||||||||||  ||| ||   |||| ||||||||||||||||||| |||    
T  17691228 atgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaatttc 17691327  T
Q  159 gtcc 162  Q
    ||||    
T  17691328 gtcc 17691331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 32132313 - 32132444
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    ||||||||||||||| |||||||  |||||||||||||| |||| | |||||| |||||||  ||| || | |||  |  ||||||||| |||||| |||    
T  32132313 atgtgtttcgtccctccaattagtggtcatttaaaaattcgtccatgtaatcgttaatccttgcaaattactcttacaaagtttaatcaattaaaatttc 32132412  T
Q  159 gtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||   |||| ||||||| || |||||||||    
T  32132413 gtccctacacccacttaattactgccacgtca 32132444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 183581 - 183507
Alignment:
Q  88 tttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| |||| | ||||||||||||||  |||||| ||| || ||| ||||||||||||||| |||||||    
T  183581 tttaaaaattggtccctgtaatcgctaatcctagcaatttacccctgcattatttaatcatttaaaatttcgtcc 183507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 1841796 - 1841738
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| ||||||||    
T  1841796 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttga 1841738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 19018019 - 19017953
Alignment:
Q  88 tttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||| |||| | || |||||||||||| |||||| |||||| ||| |||||||||||||||    
T  19018019 tttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatcatttaaaa 19017953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 26024797 - 26024671
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaac 172  Q
    |||||||||| ||| |||||||||| |||| | ||||||||||||||  |||  |   |||| | |  |||||||||||||| |||||||| | |||||     
T  26024797 tgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaat 26024698  T
Q  173 ttaataaccgccacgtcagtaatttga 199  Q
    ||||| || ||||||||| ||||||||    
T  26024697 ttaatcactgccacgtcactaatttga 26024671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 199
Target Start/End: Original strand, 33442593 - 33442743
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||| |||||||||| | || |||||||||||| |||||||||||| |||  | |||| |||||||||| || |||  || || | |  |||||| |    
T  33442593 tggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 33442692  T
Q  149 ttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||| || |||||   ||||| ||||| || ||||||||| ||||||||    
T  33442693 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 33442743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 33442989 - 33442879
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    |||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||||||||    
T  33442989 cttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcattta 33442890  T
Q  152 aaaattcgtcc 162  Q
    ||| |||||||    
T  33442889 aaatttcgtcc 33442879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 47999494 - 47999416
Alignment:
Q  76 aattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    ||||||| ||| |||||||||| |||| | |||||||||||| || |||||| ||| || ||| |||||||||||||||    
T  47999494 aattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccctgcattatttaatcatttaaaa 47999416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 30711755 - 30711606
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||  | || |||||||||||  |||  |  ||||| | |  |||||||||    
T  30711755 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 30711656  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| |||||| | | ||||||||||| || ||||||||| ||||||||    
T  30711655 taaaatttcgtcatttgaccaacttaatcactgccacgtcactaatttga 30711606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 52134465 - 52134316
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| | |||||||| || |||  || || | |  |||||| ||    
T  52134465 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatcgtt 52134366  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || |||||   ||||| ||||| || ||||||||| ||||||||    
T  52134365 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 52134316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 199
Target Start/End: Original strand, 183246 - 183370
Alignment:
Q  75 caattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaactt 174  Q
    |||||||| ||| |||||||||| |||| | || |||||||||||  |||  |  ||||| | |  |||||||||||||| || ||||| | ||||||||    
T  183246 caattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaactt 183345  T
Q  175 aataaccgccacgtcagtaatttga 199  Q
    ||| || ||||||||| ||||||||    
T  183346 aatcactgccacgtcactaatttga 183370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 5734010 - 5734113
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||||||| |||||||||| ||| |||||||||| ||| | | |||||||||||||  ||| ||   |||| ||||||||||||||    
T  5734010 ggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcatgt-aatcgctaatccttgcaaattagtcttgcattgtttaatcatt 5734108  T
Q  150 taaaa 154  Q
    |||||    
T  5734109 taaaa 5734113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 25884701 - 25884745
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaa 94  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||    
T  25884701 ggcttaatgatgtgtttcgtcattgcaattagacgtcatttaaaa 25884745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 35473654 - 35473758
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaac 172  Q
    |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||  |  ||||||| |  |||| ||||||||| || ||||| | ||||||    
T  35473654 tgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaaactagccttgtaatcattaaacatttaaaattttgtcctttgaccaac 35473753  T
Q  173 ttaat 177  Q
    |||||    
T  35473754 ttaat 35473758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 49723145 - 49723005
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| |||||||||| |||| | || |||||||||||  |||  |  ||||  | |  |||||||||||||| |||    
T  49723145 atgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcctttcaatcattaatcatttaaaatttc 49723046  T
Q  159 gtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
     |||| | ||||||||||| || ||||||||| ||||||||    
T  49723045 atcctttgaccaacttaatcactgccacgtcactaatttga 49723005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 52134068 - 52134180
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || ||||||||||||  ||||||||||| |||| | |||| |||||||||| || |||  || |||| |  |||||| ||    
T  52134068 ggcttattgatgtgtttagcccttgcaattaggcggtatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgtaattgttaatcgtt 52134167  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  52134168 taaaatttcgtcc 52134180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 14879308 - 14879253
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  14879308 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 14879253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 17692604 - 17692501
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| |||||||||  |||| | | ||||||||||||  ||| ||  | ||| ||||||||||||||||||| |||    
T  17692604 atgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgcattgtttaatcatttaaaatttc 17692505  T
Q  159 gtcc 162  Q
    ||||    
T  17692504 gtcc 17692501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 48779456 - 48779401
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  48779456 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 48779401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 1103798 - 1103740
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||||||| | || ||||||||| ||||||||    
T  1103798 ttaatcatttaaaatttcgtcctttgaccaacttattcactgccacgtcactaatttga 1103740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 4716475 - 4716541
Alignment:
Q  57 tgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgaca 123  Q
    |||||||||| | || |||||||||| | |||||||||||| |||| | |||| |||||||||||||    
T  4716475 tgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccatgtaattgctaatcctgaca 4716541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 31514716 - 31514602
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||| ||| |||||||||| | || | |||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||||    
T  31514716 ttggtttattgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattattaatca 31514617  T
Q  148 tttaaaaattcgtcc 162  Q
    ||||||| |||||||    
T  31514616 tttaaaatttcgtcc 31514602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 34849009 - 34849123
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  |||| |||  ||| |||||||||| ||| |||||||||| |||| | || |||||||||||  ||| || |||||| |   ||||||||    
T  34849009 ttggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatca 34849108  T
Q  148 tttaaaaattcgtcc 162  Q
    ||||||| |||||||    
T  34849109 tttaaaatttcgtcc 34849123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 40210461 - 40210519
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||||||||| || |||||| || ||||||||    
T  40210461 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgacattaatttga 40210519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 28011390 - 28011475
Alignment:
Q  77 attaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||| ||| |||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  |||||||||||||| |||||||    
T  28011390 attaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtcc 28011475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 31197063 - 31197112
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaatt 97  Q
    |||||||||  |||| |||| |||||||||||||| ||||||||||||||    
T  31197063 ttggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatt 31197112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 32133343 - 32133238
Alignment:
Q  59 atgtgtttcgtccctgcaattaggc-gtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaatt 157  Q
    ||||||||| | ||||||||||||  ||| |||||||||| |||||| |||||| ||||| || ||| ||  ||| | |  |||||||||||||||| ||    
T  32133343 atgtgtttcattcctgcaattagggagtcctttaaaaattcgtccttgtaatcgttaatcttggcaaattagcctcgcaaagtttaatcatttaaaattt 32133244  T
Q  158 cgtcct 163  Q
    ||||||    
T  32133243 cgtcct 32133238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 42267312 - 42267380
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaattt 127  Q
    ||||||||  ||||||||| |||| |||||||||||||| |||| | || ||  |||||||||||||||    
T  42267312 atgtgtttattccctgcaaataggggtcatttaaaaattggtccctgtattctttaatcctgacaattt 42267380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 11566 - 11426
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||| | |||||| |||||||| |||||| |||||| ||||||||||||||    
T  11566 ggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 11467  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||| | | ||||||||||| || |||||||||    
T  11466 taaaatttcgtcttttgaccaacttaatcactgccacgtca 11426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 11143 - 11280
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||  ||||||||| |||||| ||||||||||||  | | |||||||||| || |||||| |||||| |||||||||||||||||    
T  11143 ttaatgatgtgtttcgtcgttgcaattagtcgtcatctaaaaattagtctctgtgatcgctaatcttggcaatttacccttgcattgtttaatcatttaa 11242  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || |||||||| | ||||||||||| || |||| ||||    
T  11243 aatttcgtcctttgaccaacttaatcactgccaagtca 11280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 920 - 1047
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||| | |||||||||||| || |||||| |||||| ||||||||||||||    
T  920 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatt 1019  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| |||||||| | |||||||||||    
T  1020 taaaatttcgtcctttgaccaacttaat 1047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 1263 - 1211
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1263 ttggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagt 1211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 48 - 190
Target Start/End: Original strand, 33871337 - 33871479
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    ||||||||||||||||||| |||| |||||||| | ||||||||||||||||||| | ||||||||||| ||| |||||| |||||| ||||||||||||    
T  33871337 ttggcttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgtttaatca 33871436  T
Q  148 tttaaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||||| |||||||| | ||||||||||| ||||||| ||||    
T  33871437 tttaaaatttcgtcctttgaccaacttaatcaccgccaagtca 33871479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 190
Target Start/End: Original strand, 8875448 - 8875589
Alignment:
Q  49 tggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcat 148  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | |||||| |||||||| |||||| | |||| |||||||||||||    
T  8875448 tggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattgtttaatcat 8875547  T
Q  149 ttaaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    |||||| ||||| || | ||||||||||| || |||||||||    
T  8875548 ttaaaatttcgttctttgaccaacttaatcactgccacgtca 8875589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 20152779 - 20152908
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||  | |||||||||||||||  ||||| |||||| ||||||||||||    
T  20152779 ttggcttaatgatgtgtttcgtccatgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttacccttgcattgtttaatca 20152878  T
Q  148 tttaaaaattcgtcctctcaccaacttaat 177  Q
    ||||||| |||||||| | |||||||||||    
T  20152879 tttaaaatttcgtcctttgaccaacttaat 20152908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 17544474 - 17544347
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| | | |||||| |||||||| |||||| |||||| ||||||||||||||    
T  17544474 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatt 17544375  T
Q  150 taaaaattcgtcctctcaccaacttaat 177  Q
    ||||| || ||||| | |||||||||||    
T  17544374 taaaattttgtcctttgaccaacttaat 17544347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 20153341 - 20153204
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||    |||||| |||||| ||||||||||||||    
T  20153341 ggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccttgtaatcgctaatc---gcaatttacccttgcattgtttaatcatt 20153245  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| ||| |||| | ||||||||||| || || ||||||    
T  20153244 taaaatttcatcctttgaccaacttaatcactgctacgtca 20153204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 33871764 - 33871624
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||  | |||||  |||||||| |||||| |||||| ||||||||||||||    
T  33871764 ggcttaatgatgtgtttcgtccttgcaattaggcgccatttaaaaattagtctctgtaatcagtaatcctggcaatttacccttgcattgtttaatcatt 33871665  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| |||||| | | ||||||||||| || || ||||||    
T  33871664 taaaatttcgtcatttgaccaacttaatcactgctacgtca 33871624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 3656844 - 3656743
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||| || ||||||||||| |||| |||||  ||||| ||||||||||||||    
T  3656844 ggcttaatgatgtgtttcgaccttgcaattagacgtcatttaaaaattagtctttgtaatcgctaattctgataatttatccttgcattgtttaatcatt 3656745  T
Q  150 ta 151  Q
    ||    
T  3656744 ta 3656743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 190
Target Start/End: Complemental strand, 21288085 - 21287943
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    ||||||||||||||||||| |||| || |||||| |||| ||||||||||| ||| | |||||||||||| || ||||   |||||| ||||||||||||    
T  21288085 ttggcttaatgatgtgttttgtccttgtaattagacgtcgtttaaaaattaatccatgtaatcgctaatcatggcaatacacccttgcattgtttaatca 21287986  T
Q  148 tttaaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||||| ||| |||| | ||||||||||| ||| ||| ||||    
T  21287985 tttaaaatttcttcctttgaccaacttaatcaccaccaagtca 21287943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 5024437 - 5024297
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| |||||||||| ||| || |||||||||||||||||||||| || ||| ||||||||||||||||||| |||    
T  5024437 atgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgcattgtttaatcatttaaaatttc 5024338  T
Q  159 g-tcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    | ||||||| || ||||||| || ||||| ||| ||||||||    
T  5024337 gttcctctc-cccacttaatcactgccacatcactaatttga 5024297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 24547530 - 24547441
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||    
T  24547530 tgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 24547441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 22298565 - 22298669
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaac 172  Q
    |||||||||||||||||||||||||||||| | ||||||||||||  | |||||| |||||  ||||||||||||||||||| ||| |||| | ||||||    
T  22298565 tgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcggggcaatttacccttacattgtttaatcatttaaaatttcatcctttgaccaac 22298664  T
Q  173 ttaat 177  Q
    |||||    
T  22298665 ttaat 22298669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 5993889 - 5994038
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| | ||||||||||| ||| |||||| |||||| ||||||||||||||    
T  5993889 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 5993988  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| ||||| |||||| || ||||||| || |||| |||| ||||||||    
T  5993989 taaaatttcgtccctctc-cccacttaatcactgccatgtcactaatttga 5994038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 38475413 - 38475315
Alignment:
Q  64 tttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||| ||| |||||||||| ||| |||||||||| |||| | |||||| ||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  38475413 tttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 38475315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 35512157 - 35512297
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||| | ||| |||||||||| |||| | ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||    
T  35512157 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 35512256  T
Q  159 gt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    || |||||| || ||||||| || ||||| ||| ||||||||    
T  35512257 gtccctctc-cccacttaatcactgccacatcactaatttga 35512297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 38442091 - 38442180
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| || ||||||||||| ||| || |||||||||||||||||||||| | |||| ||||||||||||||||||| |||||||    
T  38442091 tgcaattaggggttatttaaaaattggtcattgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcc 38442180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 154
Target Start/End: Complemental strand, 16157283 - 16157179
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||| | |||||| ||||||||||||||| |||||| ||||||||||||||    
T  16157283 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatcatt 16157184  T
Q  150 taaaa 154  Q
    |||||    
T  16157183 taaaa 16157179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 39453309 - 39453412
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| |||||||||| |||  | ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||    
T  39453309 atgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 39453408  T
Q  159 gtcc 162  Q
    ||||    
T  39453409 gtcc 39453412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 17544077 - 17544175
Alignment:
Q  79 taggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaat 177  Q
    ||||||| |||||||||||||||| | |||| ||||||||||||||||| | |||| ||||||||||||||||||| || ||| | | |||||||||||    
T  17544077 taggcgtgatttaaaaattagtccctgtaattgctaatcctgacaatttactcttgcattgtttaatcatttaaaattttgtcatttgaccaacttaat 17544175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 8875687 - 8875618
Alignment:
Q  56 atgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaat 125  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||| ||||    
T  8875687 atgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaat 8875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 11761772 - 11761861
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| ||| || ||||||||||||||||||| |||||||    
T  11761772 tgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 11761861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 13362633 - 13362552
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||| ||| |||||||||| |||||| |||||||||||| || |||||| |||||| |||||||||||||||||||    
T  13362633 tgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcatttaaaa 13362552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 28771275 - 28771154
Alignment:
Q  41 tattgtgttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgt 140  Q
    |||||| |||||||||  |||| |||  ||| || ||||||| ||| |||||||||| |||| | |||||||||||| || |||||| ||| ||||||||    
T  28771275 tattgtattggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgt 28771176  T
Q  141 ttaatcatttaaaaattcgtcc 162  Q
    |||||||||||||| |||||||    
T  28771175 ttaatcatttaaaatttcgtcc 28771154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 186
Target Start/End: Original strand, 16083002 - 16083113
Alignment:
Q  75 caattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgt-cctctcaccaact 173  Q
    |||||||| ||  ||||||||||||||| | |||||| |||||||| |||||| |||||| ||||||||||||||||||| ||||| |||||| ||||||    
T  16083002 caattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtacctctc-ccaact 16083100  T
Q  174 taataaccgccac 186  Q
    |||| || |||||    
T  16083101 taatcactgccac 16083113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 199
Target Start/End: Original strand, 17202424 - 17202548
Alignment:
Q  75 caattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaactt 174  Q
    |||||||| ||| |||||||||| |||  | |||||||||||||||||||||| |||||| ||||||||| ||||||||| ||||||| |   || ||||    
T  17202424 caattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaagcatttaaaatttcgtccccctccccactt 17202523  T
Q  175 aataaccgccacgtcagtaatttga 199  Q
    ||| || |||| |||| ||||||||    
T  17202524 aatcactgccatgtcactaatttga 17202548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 35920588 - 35920500
Alignment:
Q  74 gcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    ||||||||| ||| |||||||||| |||| | ||||||||||||||||||||||  ||||  ||||||||||||||||||| |||||||    
T  35920588 gcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcatttaaaatttcgtcc 35920500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 24141461 - 24141556
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| | |||||| |||||||| ||| ||  ||||| |  ||||||||||||||||    
T  24141461 atgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatcatttaaaa 24141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 21287793 - 21287883
Alignment:
Q  100 tccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||||| ||||||||||| ||| |||||| |||||||||||||||||||||||||| |||||| | | ||||||||||| ||  ||||||||    
T  21287793 tccttgtaatcgctaattctggcaatttacccttgtattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactaccacgtca 21287883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 27587146 - 27587260
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  |||| |||  ||| |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| ||| || || |||||||||    
T  27587146 ttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcatcgtttaatca 27587245  T
Q  148 tttaaaaattcgtcc 162  Q
    ||||||| |||||||    
T  27587246 tttaaaatttcgtcc 27587260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 199
Target Start/End: Complemental strand, 41930910 - 41930764
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||| || |||| || |||||||||||||||||||||| |||| | |||| |||||||||  ||||||  ||||| | |  ||||||||||||    
T  41930910 ttaatgatgtgattagtccttgtaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatttaa 41930811  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    || || |||||   ||||||||||| ||  |||||||| ||||||||    
T  41930810 aatttggtccttggaccaacttaatcactaccacgtcactaatttga 41930764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 13962887 - 13962976
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | |||| ||||||||||  ||||| |||||| ||||||||||||||||||| |||||||    
T  13962887 tgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtcc 13962976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 19892727 - 19892587
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||  ||| |||||||||| |||  | |||||| ||||||| ||||||| |||||| ||||||||||||||||||| |||    
T  19892727 atgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcatttaaaatttc 19892628  T
Q  159 gtc-ctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||  |||| || ||||||| || ||||||||| ||||||||    
T  19892627 gtcattctc-cccacttaatcactgccacgtcactaatttga 19892587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 32242251 - 32242391
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| ||||||||||  ||| | |||| ||||||| || |||||| | |||| ||||||||||||||||||| |||    
T  32242251 atgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatcatttaaaatttc 32242350  T
Q  159 gt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    || |||||| || ||||||| || ||||||||| ||||||||    
T  32242351 gtccctctc-cccacttaatcactgccacgtcactaatttga 32242391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 6150454 - 6150566
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| || | | ||||| ||||||||||||||||   |||| ||||||||||||||    
T  6150454 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtaatcactaatcctgacaatttagtcttgcattgtttaatcatt 6150553  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  6150554 taaaatttcgtcc 6150566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 29646734 - 29646678
Alignment:
Q  106 taatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  29646734 taatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcc 29646678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 6757883 - 6758014
Alignment:
Q  68 gtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctca 167  Q
    |||| ||||||||||||||||||||||||| |||| | |||| |||||||||| ||||||   || | | |  |||||||||||||| || |||||   |    
T  6757883 gtccttgcaattaggcgtcatttaaaaatttgtccctgtaattgctaatcctggcaatttagtctcgcaattgttaatcatttaaaatttggtccttgga 6757982  T
Q  168 ccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||| || ||||||||| ||||||||    
T  6757983 ccaacttaatcactgccacgtcactaatttga 6758014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 3529272 - 3529158
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||||  |||| |||  ||| |||||||||| ||| |||||||||| |||| | |||||| |||||||| |||||| ||| |  ||||||||||||    
T  3529272 ttggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatca 3529173  T
Q  148 tttaaaaattcgtcc 162  Q
    ||||||| |||||||    
T  3529172 tttaaaatttcgtcc 3529158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 18247095 - 18247233
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| |||||||||| |||| | |||||||||||  || |||||| |||||| ||| |||||||||||| || |||    
T  18247095 atgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat--tggcaatttacccttgcattatttaatcatttagaatttc 18247192  T
Q  159 gt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    || |||||| || ||||||| ||||||| |||| ||||||||    
T  18247193 gtccctctc-cccacttaatcaccgccatgtcactaatttga 18247233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 20814563 - 20814414
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| |||  | ||||||||||||||  |||||| | |||| ||||||||||||||    
T  20814563 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatcatt 20814464  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || || |||||| || ||||||| || |||| |||| ||||||||    
T  20814463 taaaattttgtccctctc-cctacttaatcactgccatgtcactaatttga 20814414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 30005176 - 30005257
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaa 154  Q
    |||||||||| ||||||||||||||||| | | |||| ||||||||||||||||| |  ||| ||| |||||||||||||||    
T  30005176 tgcaattaggtgtcatttaaaaattagttcatataattgctaatcctgacaatttacatttgcattatttaatcatttaaaa 30005257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 43159233 - 43159096
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| |||||||||| ||| || || ||||||||||| ||||  |  ||||| | |  |||||||||||||| |||    
T  43159233 atgtatttcatccttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatccttacaaactagccttgcaatcattaatcatttaaaatttc 43159134  T
Q  159 gtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    ||||| | ||||||||||| || ||||||||| |||||    
T  43159133 gtcctttgaccaacttaatcactgccacgtcactaatt 43159096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 6758262 - 6758150
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| |||||||||||||| |||||||||| |||| | |||| | |||| ||| ||||||  ||||| | |  |||||||||    
T  6758262 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaattctggcaatttaaccttgcaattgttaatcatt 6758163  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  6758162 taaaatttcgtcc 6758150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 41930516 - 41930628
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| |||||||||  ||| |||||||||| |||| | |||| |||||||||| ||||||  ||||| | |  |||||||||    
T  41930516 ggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 41930615  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  41930616 taaaatttcgtcc 41930628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 199
Target Start/End: Original strand, 31482400 - 31482551
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  ||||||     
T  31482400 ttggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcg 31482499  T
Q  148 tttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||||| || |||||   ||||| ||||| || ||||||||| ||||||||    
T  31482500 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 31482551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 186445 - 186531
Alignment:
Q  76 aattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    ||||||| ||| |||||||||||||| || |||||| |||| |||  |||||  ||||| ||||||||||||||||||| |||||||    
T  186445 aattaggggtcgtttaaaaattagtcattgtaatcgttaattctggaaatttaaccttgcattgtttaatcatttaaaatttcgtcc 186531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 11047493 - 11047586
Alignment:
Q  106 taatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtc-ctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||| || |||||| |||||| ||||||||||||||||||| |||||| ||||| || ||||||| || |||| |||| ||||||||    
T  11047493 taatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtctctctc-cccacttaatcactgccatgtcactaatttga 11047586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 13362318 - 13362376
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||||| ||||||||||| || ||||||||| ||||||||    
T  13362318 ttaatcatttaaaatttcgtcctctgaccaacttaatcactgccacgtcactaatttga 13362376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 18670202 - 18670311
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| ||||| |||| ||| |||||||||| |||| | ||||||||||||    |||||| |||||| ||||||||||||||    
T  18670202 ggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaatcg---caatttacccttgcattgtttaatcatt 18670298  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  18670299 taaaatttcgtcc 18670311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 39453727 - 39453581
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| |||||||||||||| |||| | || ||||||||| |  |||  |  ||||| | |  |||||||||    
T  39453727 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatcattaatcatt 39453628  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    ||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  39453627 taaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 39453581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 14194850 - 14194739
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| || ||||||| ||| |||||||||| | || | ||||  ||||||||| |||||| |||||| ||||||||||||||    
T  14194850 ggcttaaaaatgtctttcatccttgtaattaggggtcgtttaaaaattgg-ccatgtaattactaatcctggcaatttacccttgcattgtttaatcatt 14194752  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  14194751 taaaatttcgtcc 14194739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 31482799 - 31482687
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||||||    
T  31482799 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatttgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 31482700  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  31482699 taaaatttcgtcc 31482687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 162
Target Start/End: Original strand, 40148907 - 40149010
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||||||||||||||||||||||   ||||||||||||| |||| | |||||| |||||||  ||| || |||||  |  |||||||||||||| ||||     
T  40148907 atgtgtttcgtccctgcaattagagctcatttaaaaattggtccatgtaatcgttaatcctagcaaattaccctttcaaagtttaatcatttaagaattg 40149006  T
Q  159 gtcc 162  Q
    ||||    
T  40149007 gtcc 40149010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 297014 - 297084
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| ||||||||||    
T  297014 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 297084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 1505967 - 1506037
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctg 120  Q
    |||||| |||||||||| | || |||||||||||| |||||||||||| |||| | |||| ||||||||||    
T  1505967 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctg 1506037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 199
Target Start/End: Complemental strand, 1506357 - 1506215
Alignment:
Q  57 tgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaat 156  Q
    |||||||||| | || |||||||||||| |||||||||||| |||| | |||| |||||||||| || |||  || || | |  |||||| ||||||| |    
T  1506357 tgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaatt 1506258  T
Q  157 tcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    | |||||   ||||| ||||| || ||||||||| ||||||||    
T  1506257 tggtccttggaccaaattaatcactgccacgtcactaatttga 1506215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 196
Target Start/End: Complemental strand, 6150848 - 6150702
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| ||||||||||||||| | || ||| ||||| |  |||  |  ||||| | |  |||||||||    
T  6150848 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatcattaatcatt 6150749  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    ||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  6150748 taaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 6150702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 11762122 - 11761996
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaac 172  Q
    |||||||||| ||| |||||||||| |||| | || |||||||||||  |||  |  ||||| | |  |||||||||||||| || ||||| | ||||||    
T  11762122 tgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaac 11762023  T
Q  173 ttaataaccgccacgtcagtaatttga 199  Q
    ||||| || ||||||||| ||||||||    
T  11762022 ttaatcactgccacgtcactaatttga 11761996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 32242669 - 32242521
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||  |||||||||||||||| | | |||||||||||  |||  |  ||||| | |  |||||||||    
T  32242669 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtcctgt-attcgctaatccttgcaaactagccttgcaatcattaatcatt 32242571  T
Q  150 taaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| || ||||| | ||||||||||| || ||||||||| ||||||||    
T  32242570 taaaattttgtcctttgaccaacttaatcactgccacgtcactaatttga 32242521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 19892317 - 19892457
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| |||||||||| |||| | || ||| |||||||  |||  |  ||||||| |  |||||||||||||| |||    
T  19892317 atgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcattaatcatttaaaatttc 19892416  T
Q  159 gtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| | | ||||||||| || ||||||| | ||||||||    
T  19892417 gtcctttgatcaacttaatcactgccacgtaactaatttga 19892457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 28269760 - 28269704
Alignment:
Q  106 taatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||| ||||||| | ||||||| |||||| ||||||||||||||||||| |||||||    
T  28269760 taattgctaatcataacaatttacccttgcattgtttaatcatttaaaatttcgtcc 28269704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 40150233 - 40150173
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    ||||||||||||| |||||||||| ||||||| |||||| |||| | |||||| |||||||    
T  40150233 atgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcct 40150173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 42067943 - 42067839
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    ||||||||| |||||||||||||| ||||||||||| || |||| | |||| | |||||||| |||  | ||| || |   ||||||||||||||| |||    
T  42067943 atgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgataatcctggcaaactgcccctgcaaactttaatcatttaaaatttc 42067844  T
Q  159 gtcct 163  Q
    |||||    
T  42067843 gtcct 42067839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 11047774 - 11047719
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  11047774 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 11047719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 16156946 - 16157001
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  16156946 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 16157001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 20814226 - 20814281
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  20814226 ttaatcatttaaaatttcgtcctttaaccaacttaatcactgccacgtcactaatt 20814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 28269513 - 28269568
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatt 196  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||||||| |||||    
T  28269513 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 28269568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 38475067 - 38475182
Alignment:
Q  84 gtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcctctcaccaacttaataaccgc 183  Q
    |||||||||||||| |||| | || |||||||||||  |||  |  ||||| | |  |||||||||||||| |||||| | | ||||||||||| || ||    
T  38475067 gtcatttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcatttaaaatttcgtcatttgaccaacttaatcactgc 38475166  T
Q  184 cacgtcagtaatttga 199  Q
    ||||||| ||||||||    
T  38475167 cacgtcactaatttga 38475182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 3528964 - 3529022
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| || ||||| | ||||||||||| || ||||||||| ||||||||    
T  3528964 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttga 3529022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 5994226 - 5994168
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||||||||| || |||| |||| ||||||||    
T  5994226 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccatgtcactaatttga 5994168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 6301880 - 6301822
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||||||||| |||||||| | ||||| ||||| || ||||||||| ||||||||    
T  6301880 ttaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttga 6301822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 5024111 - 5024168
Alignment:
Q  142 taatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||||||||||| || ||||| | ||||||||||| || ||||||||| ||||||||    
T  5024111 taatcatttaaaattttgtcctttgaccaacttaatcactgccacgtcactaatttga 5024168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 42265735 - 42265804
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcct 119  Q
    |||||||  |||| |||| |||||||||||||| ||| |||||||||| |||| | || |||||||||||    
T  42265735 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcct 42265804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 11740696 - 11740836
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||| ||| |||||||||| ||| ||||||||||  ||| | || |||||||||||  |||  |  ||||| ||| ||||||||||||||| ||     
T  11740696 atgtatttcatccttgcaattaggggtcgtttaaaaattgatccatatattcgctaatccttgcaaactagccttgcattctttaatcatttaaaatttt 11740795  T
Q  159 gtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| | ||| | ||||| || | ||||||| ||||||||    
T  11740796 gtcctttgacccagttaatgactgtcacgtcattaatttga 11740836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 21265570 - 21265458
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaa-tttccccttgtattgtttaatcat 148  Q
    |||||||  |||| |||| ||| | |||||| | ||| |||||||||| || | | |||||||||||| || ||| ||| |||||| |||||||||| ||    
T  21265570 ggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggttcctgtaatcgctaatcgtggcaattttacccttgcattgtttaattat 21265471  T
Q  149 ttaaaaattcgtc 161  Q
    |||||| ||||||    
T  21265470 ttaaaatttcgtc 21265458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 12662 - 12525
Alignment:
Q  53 ttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaa 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||||||| |||||| |||||| |||||||||||||||||    
T  12662 ttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaa 12563  T
Q  153 aaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    || ||||| || | ||| ||||||| || |||||||||    
T  12562 aatttcgttctttgacctacttaatcactgccacgtca 12525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 12244 - 12351
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||| ||||||||||||||||||  | |||||| || | || |||||||||||      |||||||||||||| |||||| |||||| ||||||||||||    
T  12244 ttggtttaatgatgtgtttcgtcgttacaattaagcattatataaaaattagt------aatcgctaatcctggcaatttacccttgcattgtttaatca 12337  T
Q  148 tttaaaaattcgtc 161  Q
    ||||||| ||||||    
T  12338 tttaaaatttcgtc 12351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 2395 - 2520
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| ||| | ||||||||||||||  |||||| |||||| ||||||||||||||||    
T  2395 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcattta 2494  T
Q  152 aaaattcgtcctctcaccaacttaat 177  Q
    ||| |||||||| | |||||||||||    
T  2495 aaatttcgtcctttgaccaacttaat 2520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 190
Target Start/End: Complemental strand, 12204 - 12066
Alignment:
Q  52 cttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcattta 151  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||| |||   ||||||||||||||  |||||| |||||| ||||||||||||||||    
T  12204 cttaatgatgtgtttcgtccttgcaattaaacgtcatttaaaaattaatcccagtaatcgctaatcctagcaatttacccttgcattgtttaatcattta 12105  T
Q  152 aaaattcgtcctctcaccaacttaataaccgccacgtca 190  Q
    ||| |||||||| | ||||||||||| || |||||||||    
T  12104 aaatttcgtcctttgaccaacttaatcactgccacgtca 12066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 37991 - 37842
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||  |||| |||| ||| |||||||||| ||| |||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||||||    
T  37991 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcatt 37892  T
Q  150 taaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| ||||| |||||| || ||||||| || ||||||||| ||||||||    
T  37891 taaaatttcgtccctctc-cccacttaatcactgccacgtcactaatttga 37842  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 37655 - 37712
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttg 198  Q
    |||||||||||||| |||||||| | ||||||||||| || ||||| ||| |||||||    
T  37655 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcactaatttg 37712  T

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Target: scaffold0031 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 68962 - 69114
Alignment:
Q  47 gttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatc 146  Q
    ||||||||||  |||| |||| ||| |||||||||| |||||||||||||| |||| | ||||| ||||||||| |||||| |||||| |||||||||||    
T  68962 gttggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatc 69061  T
Q  147 atttaaaaattcgt-cctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    |||||||| ||||| |||||| || ||||||| || ||||||||| ||||||||    
T  69062 atttaaaatttcgtccctctc-cccacttaatcactgccacgtcactaatttga 69114  T

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Target: scaffold0020 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 139695 - 139784
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| |||||||||| |||| | ||||||||||||||| |||||| ||| || |||| |||||||||||||| |||||||    
T  139695 tgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccatgaattgattaatcatttaaaatttcgtcc 139784  T

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Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 139978 - 139920
Alignment:
Q  141 ttaatcatttaaaaattcgtcctctcaccaacttaataaccgccacgtcagtaatttga 199  Q
    ||||| |||||||| || ||||| | |||||||||||||| ||||||||| ||||||||    
T  139978 ttaattatttaaaatttagtcctttgaccaacttaataactgccacgtcactaatttga 139920  T

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Target: scaffold0007 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 1792 - 1881
Alignment:
Q  73 tgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattcgtcc 162  Q
    |||||||||| ||| || ||||||| |||| | |||||||||||| || |||||| |||||| ||||||||||||||||||| |||||||    
T  1792 tgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 1881  T

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Target: scaffold0205 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 21009 - 21113
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||||||||||| || |||| ||||||||||||||||||||||||| |||| | |||| |||||||||  ||||||  ||||| | |  |||||||||    
T  21009 ggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcatt 21108  T
Q  150 taaaa 154  Q
    |||||    
T  21109 taaaa 21113  T

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Target: scaffold0205; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 21368 - 21289
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaattt 127  Q
    |||||||||||||||| || |||| |||||||||  ||| |||||||||| |||| | |||| ||||||| || ||||||    
T  21368 ttggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaattcgtccctgtaattgctaatcatggcaattt 21289  T

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Target: scaffold0775 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 6397 - 6266
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    ||||||||| ||| || ||||||| |||| ||||||||| |||||| |||||| |||||||  ||| || |||||| | ||||||||||||||||| |||    
T  6397 atgtgtttcttccttgaaattaggggtcacttaaaaattggtccttataatcgataatccttgcaaattacccttgcaatgtttaatcatttaaaatttc 6298  T
Q  159 gtcctctcaccaacttaataaccgccacgtca 190  Q
    || |  | ||| ||||||| || |||||||||    
T  6297 gttccttaacccacttaatgactgccacgtca 6266  T

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Target: scaffold0259 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2599 - 2551
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  2599 tttgacatgcttcttgatttaatggatgagtgaaaagatttattgtgtt 2551  T

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Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2081 - 2129
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgtgtt 49  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  2081 tttgatatgcttcttgatttaatggatgagtgaaaagatttattatgtt 2129  T

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Target: scaffold0008 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 162
Target Start/End: Complemental strand, 239970 - 239867
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    ||||||||||||| |||| ||||| |||||||||||||| || | | |||||| |||||||| ||| || |||||  |  |||||||||||||||| |||    
T  239970 atgtgtttcgtccttgcacttaggggtcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcatttaaaatttc 239871  T
Q  159 gtcc 162  Q
    ||||    
T  239870 gtcc 239867  T

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Target: scaffold0559 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 1231 - 1345
Alignment:
Q  48 ttggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatca 147  Q
    |||||||| ||||||||||   || |||||||||||| |||||||||||| |||| | |||| ||||||||||||| |||  || || | |  |||||||    
T  1231 ttggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 1330  T
Q  148 tttaaaaattcgtcc 162  Q
    ||||||| |||||||    
T  1331 tttaaaatttcgtcc 1345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 107914 - 107959
Alignment:
Q  1 tttgatatgcttcttgatttaatggatgagtgaaaagacttattgt 46  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||    
T  107914 tttgatatgctccttgatttaatggatgagtgaaaagatttattgt 107959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 160
Target Start/End: Original strand, 19866 - 19967
Alignment:
Q  59 atgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatttaaaaattc 158  Q
    |||| |||||||| |||||||| | ||| |||||||||| |||| | | ||||||||||||  ||| || || ||| ||| ||||||||||||||| |||    
T  19866 atgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaattacctttgcattctttaatcatttaaaatttc 19965  T
Q  159 gt 160  Q
    ||    
T  19966 gt 19967  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 141991 - 141879
Alignment:
Q  50 ggcttaatgatgtgtttcgtccctgcaattaggcgtcatttaaaaattagtccttttaatcgctaatcctgacaatttccccttgtattgtttaatcatt 149  Q
    |||||| |||||||||| | || |||||||||||| ||||||||||||  ||| | |||| |||||||||| || |||  || || | |  |||||||||    
T  141991 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatt 141892  T
Q  150 taaaaattcgtcc 162  Q
    ||||| |||||||    
T  141891 taaaatttcgtcc 141879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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