View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12865_low_15 (Length: 344)
Name: NF12865_low_15
Description: NF12865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12865_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 19 - 330
Target Start/End: Original strand, 33542404 - 33542715
Alignment:
| Q |
19 |
aaagcttactttagcaaattttccacctcaaaattatgacaaaactacaaaacttgatccttaaaccaaatcttctcaagttaaacttgaaaggttaaga |
118 |
Q |
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| T |
33542404 |
aaagcttactttagcaaattttccacctcaaaattatgacaaaactacaaaacttgatccttaaaccaaatcttctcaagttaaacttgaaaggttaaga |
33542503 |
T |
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| Q |
119 |
ataaagggccaccttcattacaagaatctttcttttgctttttccttgcataagaaaactgcatcttctctttaaggaccatccagacagagaaattaaa |
218 |
Q |
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| T |
33542504 |
ataaagggccaccttcattacaagaatctttcttttgctttttccttgcataagaaaactgcatcttctctttaaggaccatccagacagagaaattaaa |
33542603 |
T |
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| Q |
219 |
tataaggaatatgaaaggtagattaaataatcannnnnnnnnagggaatttggcaagtcatttatgagggagaatgatgaaatgtcagtttgtgagagag |
318 |
Q |
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| T |
33542604 |
tataaggaatatgaaaggtagattaaataatcatttttttttaaggaatttggcaagtcatttatgagggagaatgatgaaatgtcagtttgtgagagag |
33542703 |
T |
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| Q |
319 |
aagaaaacagtg |
330 |
Q |
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| T |
33542704 |
aagaaaacagtg |
33542715 |
T |
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